S100A13

General Information

Gene Name       : S100A13
Gene ID             : ENSG00000189171.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: S100A13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878S100A13ENSG00000189171.146.366.986.67ENCSR000AEF
HepG2S100A13ENSG00000189171.1470.6885.7778.22ENCSR985KAT
K562S100A13ENSG00000189171.1437.1731.2634.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for S100A13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • S100A13 RNA is bound by 13 proteins.  







eCLIP assay for S100A13 is not avaliable on ENCORE database.





13 proteins are bound to S100A13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1153591294153591380-3'-UTR,CDS,intron-Distal4.1650110.34601K562PABPC4
chr1153591304153591384-3'-UTR,CDS,intron-Distal4.5827010.03141HepG2LARP4
chr1153591302153591384-3'-UTR,CDS,intron-Distal4.231777.52225K562UCHL5
chr1153591342153591512-3'-UTR,CDS,intron-Distal3.727493.95682K562PUM1
chr1153598956153599019-5'-UTR,intron-Distal,intron-Proximal3.031834.61701K562ZNF622
chr1153598905153598981-5'-UTR,CDS,intron-Distal4.274129.27595K562DDX3X
chr1153599956153600011-5'-UTR,intron-Distal,intron-Proximal3.190924.14618K562ZNF622
chr1153599957153600020-5'-UTR,intron-Distal,intron-Proximal3.634773.38111K562DDX3X
chr1153598993153599010-5'-UTR,intron-Distal,intron-Proximal4.097454.69091K562DDX3X
chr1153598903153598969-5'-UTR,CDS,intron-Distal4.436024.30926HepG2LARP4
chr1153598898153599001-5'-UTR,CDS,intron-Distal4.4077211.77823K562PABPC4
chr1153598969153599014-5'-UTR,intron-Distal,intron-Proximal3.384744.08867HepG2LARP4
chr1153598940153599029-5'-UTR,CDS,intron-Distal,intron-Proximal3.439649.31721K562BUD13
chr1153599956153600056-5'-UTR,intron-Distal,intron-Proximal3.936653.08948K562DDX55
chr1153591375153591446-CDS,intron-Distal3.729926.15459HepG2GRWD1
chr1153591435153591512-CDS,intron-Distal4.018593.00996K562BUD13
chr1153598855153598926-CDS,intron-Distal6.0629021.30004K562YBX3
chr1153591398153591488-CDS,intron-Distal4.002193.73331K562RBM15
chr1153598834153598847-CDS,intron-Distal3.284638.68789K562YBX3
chr1153591376153591453-CDS,intron-Distal4.390355.48535K562GRWD1
chr1153598795153598834-CDS,intron-Distal,intron-Proximal3.7328211.82099K562YBX3
chr1153598847153598855-CDS,intron-Distal3.354184.08171K562YBX3
chr1153598839153598899-CDS,intron-Distal3.738654.69091K562DDX3X
chr1153591384153591475-CDS,intron-Distal3.704547.99011HepG2LARP4
chr1153591494153591514-CDS,intron-Distal4.650636.26929K562YBX3
chr1153591384153591465-CDS,intron-Distal3.562956.44869K562UCHL5
chr1153604293153604422-intron-Distal,intron-Proximal5.030414.06667K562GTF2F1
chr1153599863153599950-intron-Distal,intron-Proximal3.302114.87883K562BUD13
chr1153604298153604387-intron-Distal4.808433.85435K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for S100A13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for S100A13 is not available on ENCORE database.

  • 119 RBPs can affect the levels of S100A13.  








The Knockdown/knockout RNA-Seq assay for S100A13 is not available on ENCORE database.





119 RBPs can affect the gene expression of S100A13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
S100A13ENSG00000189171.9160.51010310.41310-0.951505.453004.18130HepG2ABCF1
S100A13ENSG00000189171.91122.71220427.846301.3917045.3997043.68740HepG2ACO1
S100A13ENSG00000189171.92026.70810880.847101.2021018.2590017.01860HepG2AKAP1
S100A13ENSG00000189171.9603.37440337.592800.837702.880001.82240HepG2AKAP8
S100A13ENSG00000189171.91266.44700714.776500.8251017.9723016.50760HepG2AUH
S100A13ENSG00000189171.9467.61140148.116801.6585021.8237020.39540HepG2BOP1
S100A13ENSG00000189171.9375.01820232.530900.689404.611003.03570HepG2BUD13
S100A13ENSG00000189171.9284.59370203.292800.485202.348801.63440HepG2CALR
S100A13ENSG00000189171.9288.61180427.77560-0.567705.143304.28790HepG2CKAP4
S100A13ENSG00000189171.9518.84500255.584601.0214010.640908.64060HepG2CPSF7
S100A13ENSG00000189171.91690.64550721.153701.2291041.8082039.90990HepG2CELF1
S100A13ENSG00000189171.9242.42310395.70680-0.706907.437006.18230HepG2DDX19B
S100A13ENSG00000189171.9508.18970303.886800.741707.554305.77260HepG2DDX1
S100A13ENSG00000189171.9254.16200349.17850-0.458202.367201.52780HepG2DDX24
S100A13ENSG00000189171.91256.75300843.753400.574705.034204.21230HepG2DDX3X
S100A13ENSG00000189171.9524.74780348.681300.589604.427602.80770HepG2DDX47
S100A13ENSG00000189171.91124.33520450.825301.3183018.4440016.71110HepG2DDX55
S100A13ENSG00000189171.93049.36390724.875902.0726020.9581019.47140HepG2DDX6
S100A13ENSG00000189171.9259.04810409.33870-0.660105.570404.67070HepG2DKC1
S100A13ENSG00000189171.9384.03280295.321200.378802.554301.92320HepG2DNAJC2
S100A13ENSG00000189171.9587.44700328.569200.838206.381504.71600HepG2AGO1
S100A13ENSG00000189171.9352.00550226.688600.634803.659602.62930HepG2EIF3D
S100A13ENSG00000189171.9213.72960336.92400-0.656604.398803.06990HepG2EIF3G
S100A13ENSG00000189171.9303.70580769.97380-1.3421017.2043015.61760HepG2EIF4A3
S100A13ENSG00000189171.9550.85100749.74570-0.444702.160001.54970HepG2EIF4B
S100A13ENSG00000189171.9148.54960268.86600-0.855905.125803.68320HepG2ESF1
S100A13ENSG00000189171.9477.15710820.66550-0.7823012.5722011.44250HepG2ETF1
S100A13ENSG00000189171.9552.69170313.432800.818205.668604.60530HepG2FIP1L1
S100A13ENSG00000189171.9568.46070776.97920-0.450802.938802.22410HepG2FXR1
S100A13ENSG00000189171.9401.77450765.19530-0.9294010.110508.40810HepG2G3BP2
S100A13ENSG00000189171.9115.23640201.83250-0.808603.770802.70920HepG2GEMIN5
S100A13ENSG00000189171.9223.10980300.83960-0.431201.857901.31640HepG2HNRNPA1
S100A13ENSG00000189171.91031.55520712.593200.533607.772306.34810HepG2HNRNPA2B1
S100A13ENSG00000189171.9220.54220334.61760-0.601503.265802.51830HepG2HNRNPC
S100A13ENSG00000189171.9249.27370438.31590-0.814208.171307.02050HepG2HNRNPF
S100A13ENSG00000189171.9971.93320706.241500.460603.867003.07900HepG2HNRNPL
S100A13ENSG00000189171.9474.85760332.406100.514404.442303.68970HepG2HNRNPU
S100A13ENSG00000189171.9275.82900431.62160-0.646002.389301.71430HepG2IGF2BP1
S100A13ENSG00000189171.9446.02240732.56110-0.715806.052905.09170HepG2IGF2BP2
S100A13ENSG00000189171.9275.49790450.31620-0.708904.158403.13510HepG2LARP4
S100A13ENSG00000189171.9581.77480430.049300.435902.796901.65680HepG2LARP7
S100A13ENSG00000189171.9316.17170777.25100-1.2977017.4879015.91280HepG2MAGOH
S100A13ENSG00000189171.9462.97410781.58360-0.755506.250405.33220HepG2MATR3
S100A13ENSG00000189171.9407.75880253.628400.684904.725003.68860HepG2MSI2
S100A13ENSG00000189171.92108.12740471.485602.1606032.2143029.40890HepG2PABPC1
S100A13ENSG00000189171.9536.04200329.038700.704007.810006.50290HepG2PARN
S100A13ENSG00000189171.9867.41660663.564100.386404.015203.31200HepG2PCBP1
S100A13ENSG00000189171.9210.23800331.57790-0.657303.080901.98750HepG2PCBP2
S100A13ENSG00000189171.9850.04430462.607700.877606.132803.91670HepG2PNPT1
S100A13ENSG00000189171.9123.05270236.90160-0.945005.443804.39380HepG2PRPF4
S100A13ENSG00000189171.9229.83520347.85620-0.597902.810901.99590HepG2PRPF8
S100A13ENSG00000189171.9517.26930733.93130-0.504702.333001.77900HepG2PUF60
S100A13ENSG00000189171.91071.58760779.128300.459707.795506.90510HepG2PUM1
S100A13ENSG00000189171.9530.72320778.54190-0.552805.344804.42700HepG2PUM2
S100A13ENSG00000189171.9354.02590435.79250-0.299801.824301.30170HepG2PUS1
S100A13ENSG00000189171.91384.73490319.876802.1139028.0154026.01280HepG2RAVER1
S100A13ENSG00000189171.9613.68580311.846900.9766012.8526011.21140HepG2RBM15
S100A13ENSG00000189171.91362.15130685.923200.9897023.0824021.87780HepG2RBM22
S100A13ENSG00000189171.9813.45760498.222500.707204.888402.87280HepG2RBM47
S100A13ENSG00000189171.9325.32200751.43470-1.2078022.7193021.46220HepG2NELFE
S100A13ENSG00000189171.9341.83890699.86190-1.0338017.2986015.97370HepG2RECQL
S100A13ENSG00000189171.9114.62530220.59330-0.944505.651204.80830HepG2RPS19
S100A13ENSG00000189171.9320.96000478.25820-0.575403.725602.80060HepG2RPS2
S100A13ENSG00000189171.9366.50350517.95060-0.499002.476601.71870HepG2RPS3A
S100A13ENSG00000189171.9544.82010344.109700.662803.654102.76790HepG2RRP9
S100A13ENSG00000189171.9326.17190221.375500.559002.986502.00770HepG2SERBP1
S100A13ENSG00000189171.9568.91990702.97040-0.305202.255901.71530HepG2SF3B4
S100A13ENSG00000189171.9554.76390345.230200.684208.379607.35550HepG2SMN1
S100A13ENSG00000189171.91253.57530774.722600.6942013.9470013.05280HepG2SRFBP1
S100A13ENSG00000189171.9401.81710733.75010-0.8688013.5092012.63400HepG2SRSF1
S100A13ENSG00000189171.9973.01430724.683600.425005.274904.45240HepG2SRSF5
S100A13ENSG00000189171.9741.93590596.945900.313601.791301.33020HepG2SRSF9
S100A13ENSG00000189171.9367.24480672.63850-0.8731013.7554012.78680HepG2SSB
S100A13ENSG00000189171.9565.40160298.960800.919206.005604.25360HepG2SUB1
S100A13ENSG00000189171.9539.62870824.13630-0.610908.444307.45680HepG2SUCLG1
S100A13ENSG00000189171.9599.08250370.763300.692204.421102.72760HepG2SUGP2
S100A13ENSG00000189171.9301.53100211.607500.510802.760301.82050HepG2SUPT6H
S100A13ENSG00000189171.9214.28350359.73130-0.747402.816201.73980HepG2TBRG4
S100A13ENSG00000189171.91029.24490300.838001.7744032.9744030.44280HepG2TFIP11
S100A13ENSG00000189171.9213.34600323.03520-0.598503.629003.07290HepG2TIAL1
S100A13ENSG00000189171.9959.00300325.879301.5571040.6164038.77660HepG2TRIM56
S100A13ENSG00000189171.9467.03830717.06530-0.618605.771304.45080HepG2TUFM
S100A13ENSG00000189171.9659.87760265.143701.3153018.3110016.39570HepG2UCHL5
S100A13ENSG00000189171.9777.00370463.926200.743905.508303.95730HepG2XPO5
S100A13ENSG00000189171.9319.42860441.80660-0.467902.056001.42310HepG2XRN2
S100A13ENSG00000189171.9514.80010266.749200.9484014.1674013.17030HepG2ZNF622
S100A13ENSG00000189171.9187.82220319.76870-0.767704.158602.53950HepG2ZRANB2
S100A13ENSG00000189171.9836.61690419.986600.9941019.6940018.29680K562AGGF1
S100A13ENSG00000189171.9967.17110437.029001.1459020.1146018.02820K562AKAP8L
S100A13ENSG00000189171.9355.91610165.724301.102707.973806.45980K562BOP1
S100A13ENSG00000189171.9633.82410501.862000.336702.450801.35600K562CCDC124
S100A13ENSG00000189171.9570.77820375.816100.602804.777003.29660K562CPEB4
S100A13ENSG00000189171.9360.30640176.191501.032009.189407.74170K562CPSF6
S100A13ENSG00000189171.9724.39860458.394100.660107.104305.33440K562DDX3X
S100A13ENSG00000189171.9674.51310438.950900.619707.023305.95380K562EIF2S2
S100A13ENSG00000189171.977.98540178.33770-1.193304.629103.29550K562EIF3A
S100A13ENSG00000189171.9255.48290385.34660-0.592904.347703.36100K562EIF3G
S100A13ENSG00000189171.9310.21030431.27070-0.475303.452902.13720K562EIF4B
S100A13ENSG00000189171.9487.95730315.293100.630003.718401.69250K562FAM120A
S100A13ENSG00000189171.9390.75500218.905200.835906.857505.47210K562FIP1L1
S100A13ENSG00000189171.9308.68360179.311400.783604.838003.70430K562FMR1
S100A13ENSG00000189171.9276.27120152.000200.861905.105903.82170K562FTO
S100A13ENSG00000189171.9218.49690498.03660-1.1886016.6994015.32360K562FXR1
S100A13ENSG00000189171.9185.88830423.02060-1.186306.109204.96970K562G3BP2
S100A13ENSG00000189171.9367.39830168.202701.1270010.016608.49330K562GPKOW
S100A13ENSG00000189171.91225.41680584.908601.0669018.6103016.57820K562GRSF1
S100A13ENSG00000189171.9443.17370296.743400.578603.515002.62090K562HSPD1
S100A13ENSG00000189171.9724.67840463.748400.643906.190104.84530K562KIF1C
S100A13ENSG00000189171.9406.56660588.48180-0.533502.956502.08720K562MAGOH
S100A13ENSG00000189171.9620.03170443.960700.481803.775202.45440K562MAK16
S100A13ENSG00000189171.9252.94470164.191700.623303.079602.15350K562METAP2
S100A13ENSG00000189171.9419.83880307.282300.450203.127002.26780K562MTPAP
S100A13ENSG00000189171.9664.24040364.151600.867106.014204.52810K562NAA15
S100A13ENSG00000189171.9509.81770341.401000.578405.961404.92540K562NSUN2
S100A13ENSG00000189171.9641.35950335.050100.936704.615103.24620K562PABPN1
S100A13ENSG00000189171.9474.20290248.547400.931906.039504.74760K562PPIG
S100A13ENSG00000189171.9346.97500571.76540-0.720607.579606.51630K562PTBP1
S100A13ENSG00000189171.91228.71740840.535700.547704.255803.05790K562PUM2
S100A13ENSG00000189171.91081.77840433.313701.3198023.5629021.99560K562PUS1
S100A13ENSG00000189171.9756.81580422.281100.8416012.6256011.36200K562RBM15
S100A13ENSG00000189171.9217.70160372.94160-0.776604.744503.38600K562RPS3
S100A13ENSG00000189171.9132.69190262.75660-0.985606.491504.83940K562SAFB
S100A13ENSG00000189171.9168.35460271.67610-0.690403.705602.02130K562SDAD1
S100A13ENSG00000189171.9685.05770336.901201.0238016.9578015.07590K562SF3A3
S100A13ENSG00000189171.9290.82090160.028000.861704.730403.43390K562SF3B1
S100A13ENSG00000189171.9228.84400335.71970-0.552903.517201.78680K562SRSF9
S100A13ENSG00000189171.9169.17300295.81020-0.806205.673704.48960K562SYNCRIP
S100A13ENSG00000189171.9568.40260361.996100.650803.853603.01780K562UPF1
S100A13ENSG00000189171.9765.64060439.435200.800904.403002.63440K562UTP18
S100A13ENSG00000189171.9470.13960239.892700.970608.494106.49190K562UTP3
S100A13ENSG00000189171.91135.81060891.349900.349602.791001.92360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for S100A13 is not available on ENCORE database.





5 RBPs can affect the splicing of S100A13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIS100A13ENSG00000189171.9chr1-153598795153600074153598795153599009153599958153600074-0.072000.000750.03221excludedK562HNRNPUL1
RIS100A13ENSG00000189171.9chr1-1535987951536000741535987951535990091535999581536000740.052000.000090.00215includedK562U2AF2
RIS100A13ENSG00000189171.9chr1-1535987951536000741535987951535990091535999581536000740.062000.000110.05740includedHepG2IGF2BP1
RIS100A13ENSG00000189171.9chr1-1535987951536000741535987951535990091535999581536000740.051000.000000.00000includedHepG2HNRNPK
RIS100A13ENSG00000189171.9chr1-1535987951536000741535987951535990091535999581536000740.068000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for S100A13 is not avaliable on ENCORE database.