RPL29

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPL29	ENSG00000162244.11	1088.26	1685.93	1387.10	ENCSR000AEF
HepG2	RPL29	ENSG00000162244.11	2063.76	1144.12	1603.94	ENCSR985KAT
K562	RPL29	ENSG00000162244.11	1157.21	861.33	1009.27	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	RPL29-BGKcLV30-K562	ENCSR036ZTN	RPL29	K562	Released		ENCSR347NKX	CRISPR	KD% = 52.8,51.4
knockdown followed by RNA-seq	RPL29-BGHcLV32-HepG2	ENCSR333JNM	RPL29	HepG2	Released		ENCSR232ERY	CRISPR	KD% = 69.9,70.3

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
RPL29	ENCAB581HIJ	A305-056A	1				BGHcLV32-45, Released, ENCODE4	BGKcLV30-47, Released, ENCODE4

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
RPL29	K562	CRISPR	ENCSR036ZTN	ENCSR347NKX	RPL29-BGKcLV30-47,RPL29-BGKcLV30-48	NT-BGKcLV30-1,NT-BGKcLV30-2	52.8,51.4	Released	ENCODE4
RPL29	HepG2	CRISPR	ENCSR333JNM	ENCSR232ERY	RPL29-BGHcLV32-45,RPL29-BGHcLV32-46	NT-BGHcLV32-1,NT-BGHcLV32-2	69.9,70.3	Released	ENCODE4

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPL29 is not avaliable on ENCORE database.

Proteins bound to RNA

RPL29 RNA is bound by 17 proteins.

eCLIP assay for RPL29 is not avaliable on ENCORE database.

17 proteins are bound to RPL29 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	52028943	52029037	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.06811	37.31710	K562	AQR
chr3	52027879	52027904	-	3'-UTR,CDS,intron-Distal	3.14728	87.82197	K562	YBX3
chr3	52027772	52027819	-	3'-UTR,CDS,intron-Distal	4.08809	400.00000	K562	PABPC4
chr3	52028134	52028142	-	3'-UTR,CDS,intron-Distal	4.64193	18.40969	HepG2	IGF2BP1
chr3	52028139	52028142	-	3'-UTR,CDS,intron-Distal	5.35677	11.67575	HepG2	IGF2BP3
chr3	52027857	52027972	-	3'-UTR,CDS,intron-Distal	3.62944	13.27867	K562	METAP2
chr3	52028108	52028139	-	3'-UTR,CDS,intron-Distal	5.35677	11.67575	HepG2	IGF2BP3
chr3	52027742	52027769	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90334	42.29636	HepG2	LARP4
chr3	52027910	52027921	-	3'-UTR,CDS,intron-Distal	3.07942	400.00000	K562	YBX3
chr3	52028121	52028142	-	3'-UTR,CDS,intron-Distal	4.26793	56.33834	K562	PABPC4
chr3	52028109	52028143	-	3'-UTR,CDS,intron-Distal	4.29078	13.19849	K562	IGF2BP1
chr3	52028111	52028158	-	3'-UTR,CDS,intron-Distal	5.07499	7.81134	HepG2	AQR
chr3	52027853	52027965	-	3'-UTR,CDS,intron-Distal	4.05544	12.92533	HepG2	RPS3
chr3	52028937	52028974	-	3'-UTR,intron-Distal,intron-Proximal	3.06400	5.78875	K562	PRPF8
chr3	52027722	52027742	-	3'-UTR,intron-Distal,intron-Proximal	3.90348	34.82148	HepG2	LARP4
chr3	52027739	52027767	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.00875	32.22472	K562	PABPC4
chr3	52027801	52027850	-	3'-UTR,CDS,intron-Distal	3.56971	43.33674	HepG2	LARP4
chr3	52027766	52027825	-	3'-UTR,CDS,intron-Distal	3.35800	12.68601	K562	METAP2
chr3	52028957	52029047	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22313	6.89981	K562	EFTUD2
chr3	52027923	52027935	-	3'-UTR,CDS,intron-Distal	3.10265	400.00000	K562	YBX3
chr3	52027819	52027832	-	3'-UTR,CDS,intron-Distal	3.34448	11.83357	HepG2	YBX3
chr3	52027878	52027910	-	3'-UTR,CDS,intron-Distal	3.10431	30.95944	HepG2	LARP4
chr3	52027868	52027872	-	3'-UTR,CDS,intron-Distal	3.10040	55.87312	K562	YBX3
chr3	52027932	52027941	-	3'-UTR,CDS,intron-Distal	3.16425	41.36696	HepG2	YBX3
chr3	52027949	52027956	-	3'-UTR,CDS,intron-Distal	3.41664	400.00000	K562	YBX3
chr3	52027769	52027840	-	3'-UTR,CDS,intron-Distal	3.02287	4.90904	HepG2	AKAP1
chr3	52027941	52027969	-	3'-UTR,CDS,intron-Distal	3.19922	46.67642	HepG2	YBX3
chr3	52027819	52027846	-	3'-UTR,CDS,intron-Distal	4.37777	52.92194	K562	PABPC4
chr3	52027722	52027739	-	3'-UTR,intron-Distal,intron-Proximal	4.63671	16.02177	K562	PABPC4
chr3	52027917	52027932	-	3'-UTR,CDS,intron-Distal	3.16760	43.53269	HepG2	YBX3
chr3	52027867	52027912	-	3'-UTR,CDS,intron-Distal	3.15812	31.40635	K562	PABPC4
chr3	52027856	52027867	-	3'-UTR,CDS,intron-Distal	4.49357	24.73473	K562	PABPC4
chr3	52028108	52028177	-	3'-UTR,CDS,intron-Distal	4.18483	25.81059	K562	AQR
chr3	52027962	52027967	-	3'-UTR,CDS,intron-Distal	3.21246	400.00000	K562	YBX3
chr3	52027910	52027921	-	3'-UTR,CDS,intron-Distal	3.13300	20.06986	HepG2	LARP4
chr3	52027789	52027853	-	3'-UTR,CDS,intron-Distal	3.83418	12.92533	HepG2	RPS3
chr3	52027775	52027849	-	3'-UTR,CDS,intron-Distal	3.40103	7.33479	HepG2	IGF2BP3
chr3	52027872	52027879	-	3'-UTR,CDS,intron-Distal	3.00001	59.97147	K562	YBX3
chr3	52027712	52027766	-	3'-UTR,intron-Distal,intron-Proximal	3.10187	7.43074	K562	METAP2
chr3	52027774	52027801	-	3'-UTR,CDS,intron-Distal	3.66729	37.79997	HepG2	LARP4
chr3	52027941	52027949	-	3'-UTR,CDS,intron-Distal	3.14732	400.00000	K562	YBX3
chr3	52027956	52027962	-	3'-UTR,CDS,intron-Distal	3.33886	400.00000	K562	YBX3
chr3	52027850	52027868	-	3'-UTR,CDS,intron-Distal	3.78431	15.35648	HepG2	LARP4
chr3	52027936	52027941	-	3'-UTR,CDS,intron-Distal	3.15734	400.00000	K562	YBX3
chr3	52028108	52028134	-	3'-UTR,CDS,intron-Distal	4.58750	16.98737	HepG2	IGF2BP1
chr3	52029830	52029851	-	5'-UTR,intron-Distal,intron-Proximal	5.25898	20.70668	K562	AQR
chr3	52029810	52029866	-	5'-UTR,intron-Distal,intron-Proximal	3.47414	4.27210	HepG2	NCBP2
chr3	52029868	52029922	-	5'-UTR,intron-Distal,intron-Proximal	3.02788	3.64045	K562	EIF3G
chr3	52029851	52029865	-	5'-UTR,intron-Distal,intron-Proximal	4.78958	19.32372	K562	AQR
chr3	52029476	52029485	-	5'-UTR,CDS,intron-Distal	3.91409	8.34487	HepG2	IGF2BP3
chr3	52029871	52029909	-	5'-UTR,intron-Distal,intron-Proximal	4.59197	400.00000	K562	PABPC4
chr3	52029470	52029485	-	5'-UTR,CDS,intron-Distal	3.23279	43.64874	K562	PABPC4
chr3	52029870	52029885	-	5'-UTR,intron-Distal,intron-Proximal	3.00778	4.42079	K562	PCBP1
chr3	52029468	52029481	-	5'-UTR,CDS,intron-Distal	3.32556	25.12242	HepG2	LARP4
chr3	52029871	52029911	-	5'-UTR,intron-Distal,intron-Proximal	3.31172	50.20125	HepG2	LARP4
chr3	52029871	52029912	-	5'-UTR,intron-Distal,intron-Proximal	3.13564	7.62810	HepG2	AKAP1
chr3	52029834	52029888	-	5'-UTR,intron-Distal,intron-Proximal	3.91488	12.96952	HepG2	AQR
chr3	52029460	52029525	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.18577	8.48054	HepG2	AQR
chr3	52029691	52029758	-	5'-UTR,intron-Distal	4.13664	3.91585	HepG2	PRPF4
chr3	52029871	52029908	-	5'-UTR,intron-Distal,intron-Proximal	4.14233	8.86290	HepG2	IGF2BP3
chr3	52029871	52029910	-	5'-UTR,intron-Distal,intron-Proximal	3.24255	12.32175	K562	LARP4
chr3	52029007	52029054	-	CDS,intron-Distal,intron-Proximal	4.78003	8.44604	HepG2	PRPF8
chr3	52029020	52029059	-	CDS,intron-Distal,intron-Proximal	4.83677	6.74224	HepG2	AQR
chr3	52029057	52029080	-	CDS,intron-Distal,intron-Proximal	4.20785	58.06069	K562	PABPC4
chr3	52029057	52029072	-	CDS,intron-Distal,intron-Proximal	3.02849	8.93663	HepG2	LARP4
chr3	52029093	52029123	-	CDS,intron-Distal,intron-Proximal	4.54217	26.21874	HepG2	IGF2BP1
chr3	52029440	52029463	-	CDS,intron-Distal,intron-Proximal	4.10332	9.82133	K562	METAP2
chr3	52029439	52029476	-	CDS,intron-Distal,intron-Proximal	4.12346	13.98110	HepG2	IGF2BP3
chr3	52029060	52029069	-	CDS,intron-Distal	4.26313	12.69306	K562	IGF2BP1
chr3	52029098	52029122	-	CDS,intron-Distal	4.43148	7.94690	K562	METAP2
chr3	52029038	52029058	-	CDS,intron-Distal,intron-Proximal	4.12199	19.38001	K562	AQR
chr3	52029106	52029136	-	CDS,intron-Distal,intron-Proximal	4.17931	7.53394	K562	AQR
chr3	52029440	52029478	-	CDS,intron-Distal,intron-Proximal	3.25906	31.39810	HepG2	IGF2BP1
chr3	52029101	52029122	-	CDS,intron-Distal	3.99658	9.34812	K562	IGF2BP2
chr3	52029106	52029122	-	CDS,intron-Distal	4.05523	42.55131	K562	PABPC4
chr3	52029118	52029122	-	CDS,intron-Distal	3.05263	4.84673	K562	IGF2BP1
chr3	52029099	52029153	-	CDS,intron-Distal,intron-Proximal	4.15995	7.08450	HepG2	AQR
chr3	52029088	52029118	-	CDS,intron-Distal	3.04545	5.25811	K562	IGF2BP1
chr3	52029057	52029060	-	CDS,intron-Distal,intron-Proximal	4.51032	13.52559	K562	IGF2BP1
chr3	52029440	52029470	-	CDS,intron-Distal,intron-Proximal	3.61913	53.48234	K562	PABPC4
chr3	52029057	52029067	-	CDS,intron-Distal,intron-Proximal	5.36541	11.87954	HepG2	IGF2BP3
chr3	52029100	52029122	-	CDS,intron-Distal	4.10801	9.50946	HepG2	IGF2BP3
chr3	52029440	52029442	-	CDS,intron-Distal,intron-Proximal	3.99981	9.79577	K562	IGF2BP2
chr3	52028981	52029038	-	CDS,intron-Distal,intron-Proximal	4.34306	14.86752	K562	PRPF8
chr3	52029057	52029068	-	CDS,intron-Distal,intron-Proximal	4.16507	17.35490	HepG2	IGF2BP1
chr3	52028980	52029027	-	CDS,intron-Distal,intron-Proximal	3.28864	6.69476	K562	BUD13
chr3	52029601	52029689	-	intron-Distal	3.40821	4.35063	HepG2	PRPF4
chr3	52029606	52029689	-	intron-Distal	3.78052	5.85206	K562	EFTUD2
chr3	52028160	52028213	-	intron-Distal	4.84123	5.68078	HepG2	AQR
chr3	52029388	52029438	-	intron-Distal,intron-Proximal	4.83677	6.74224	HepG2	AQR
chr3	52029396	52029433	-	intron-Distal,intron-Proximal	4.13230	10.85246	HepG2	PRPF8
chr3	52029399	52029424	-	intron-Distal,intron-Proximal	3.32438	4.35521	HepG2	BUD13
chr3	52029389	52029436	-	intron-Distal,intron-Proximal	4.42789	11.32600	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RPL29 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPL29 is not available on ENCORE database.
132 RBPs can affect the levels of RPL29.

The Knockdown/knockout RNA-Seq assay for RPL29 is not available on ENCORE database.

132 RBPs can affect the gene expression of RPL29 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPL29	ENSG00000162244.6	7165.96080	8955.67640	-0.32160	3.35370	2.17980	HepG2	AATF
RPL29	ENSG00000162244.6	15964.63110	27719.12740	-0.79600	11.29040	10.28570	HepG2	AKAP1
RPL29	ENSG00000162244.6	8202.73560	10816.49410	-0.39910	2.92950	2.14130	HepG2	AKAP8L
RPL29	ENSG00000162244.6	15958.06800	22934.55160	-0.52320	6.33870	5.17300	HepG2	ASCC1
RPL29	ENSG00000162244.6	13986.57440	17028.98510	-0.28390	5.79320	4.86120	HepG2	AUH
RPL29	ENSG00000162244.6	5281.15910	7326.76470	-0.47230	4.94440	3.77250	HepG2	BCLAF1
RPL29	ENSG00000162244.6	5670.67890	8291.58470	-0.54810	2.55520	1.37320	HepG2	BUD13
RPL29	ENSG00000162244.6	5794.98050	7207.58320	-0.31470	3.69690	2.82380	HepG2	CALR
RPL29	ENSG00000162244.6	16798.14190	21789.62870	-0.37530	3.69870	2.81360	HepG2	CIRBP
RPL29	ENSG00000162244.6	5135.47610	9967.75360	-0.95680	3.28310	2.44370	HepG2	CNOT7
RPL29	ENSG00000162244.6	5976.04210	4839.19770	0.30430	2.73330	2.05080	HepG2	CPSF6
RPL29	ENSG00000162244.6	7749.10870	5729.64430	0.43550	5.43450	4.00730	HepG2	YBX3
RPL29	ENSG00000162244.6	6581.05070	9171.17400	-0.47880	2.91460	1.51110	HepG2	CSTF2T
RPL29	ENSG00000162244.6	4974.31720	5737.58740	-0.20590	2.42780	1.34470	HepG2	DDX1
RPL29	ENSG00000162244.6	5385.03490	9877.06090	-0.87510	21.05760	19.41300	HepG2	DDX21
RPL29	ENSG00000162244.6	11378.53880	26551.32650	-1.22250	29.46970	27.67290	HepG2	DDX3X
RPL29	ENSG00000162244.6	6407.33090	8291.29790	-0.37190	3.27470	2.44400	HepG2	DDX55
RPL29	ENSG00000162244.6	10820.58350	22811.67220	-1.07600	19.91050	18.45660	HepG2	DDX6
RPL29	ENSG00000162244.6	7060.84350	5576.43490	0.34040	9.94520	8.80040	HepG2	DNAJC2
RPL29	ENSG00000162244.6	5888.02580	8690.16930	-0.56160	4.95100	3.75060	HepG2	EEF2
RPL29	ENSG00000162244.6	5154.79020	7243.13180	-0.49070	4.61530	3.18010	HepG2	EFTUD2
RPL29	ENSG00000162244.6	7019.28560	9097.96080	-0.37420	2.55900	1.50040	HepG2	AGO1
RPL29	ENSG00000162244.6	10868.62470	21925.90700	-1.01250	21.08730	19.55750	HepG2	EIF2S1
RPL29	ENSG00000162244.6	7468.98370	9329.37180	-0.32090	4.06720	2.78520	HepG2	EIF3G
RPL29	ENSG00000162244.6	10120.61900	24229.00800	-1.25940	26.48560	24.55330	HepG2	EIF4A3
RPL29	ENSG00000162244.6	18173.77740	23593.57780	-0.37650	2.38980	1.74890	HepG2	EIF4B
RPL29	ENSG00000162244.6	17124.17860	13209.52460	0.37440	5.19970	4.11020	HepG2	EIF4G1
RPL29	ENSG00000162244.6	18329.87310	12653.48430	0.53460	3.93930	2.97730	HepG2	EIF4G2
RPL29	ENSG00000162244.6	10759.73000	19551.78120	-0.86170	49.33610	47.38650	HepG2	ETF1
RPL29	ENSG00000162244.6	11155.96450	15002.19730	-0.42740	6.29470	5.13680	HepG2	FUBP3
RPL29	ENSG00000162244.6	11801.27870	24451.18720	-1.05100	23.15900	21.37670	HepG2	FXR1
RPL29	ENSG00000162244.6	7962.76140	22679.36100	-1.51000	40.03690	37.61770	HepG2	G3BP1
RPL29	ENSG00000162244.6	15693.79620	24080.57770	-0.61770	8.98500	7.36780	HepG2	G3BP2
RPL29	ENSG00000162244.6	4168.15390	5679.90860	-0.44650	2.26540	1.67590	HepG2	HNRNPA1
RPL29	ENSG00000162244.6	8541.62100	12304.48040	-0.52660	6.15120	4.85180	HepG2	HNRNPA2B1
RPL29	ENSG00000162244.6	4593.72800	6317.88330	-0.45980	3.91320	3.09930	HepG2	HNRNPC
RPL29	ENSG00000162244.6	9383.78130	7678.21390	0.28930	5.35400	4.39620	HepG2	HNRNPF
RPL29	ENSG00000162244.6	17120.18680	12193.96820	0.48940	8.26650	7.15790	HepG2	HNRNPL
RPL29	ENSG00000162244.6	7176.73990	6276.11060	0.19340	2.94000	2.31670	HepG2	HNRNPU
RPL29	ENSG00000162244.6	11907.83990	23052.11420	-0.95300	19.25240	17.65210	HepG2	IGF2BP2
RPL29	ENSG00000162244.6	9494.76670	21637.28340	-1.18830	6.30600	4.85240	HepG2	IGF2BP3
RPL29	ENSG00000162244.6	8132.03620	6410.83330	0.34300	11.60820	10.22160	HepG2	ILF2
RPL29	ENSG00000162244.6	17709.66990	23188.28430	-0.38890	2.71370	1.72220	HepG2	KHSRP
RPL29	ENSG00000162244.6	11844.32890	9841.66670	0.26710	2.98610	1.93150	HepG2	KIF1C
RPL29	ENSG00000162244.6	6341.02180	12060.46380	-0.92750	4.26250	2.70170	HepG2	KRR1
RPL29	ENSG00000162244.6	7761.44000	24459.74640	-1.65600	51.75270	49.19370	HepG2	MAGOH
RPL29	ENSG00000162244.6	11192.86590	24595.80980	-1.13580	22.78150	21.11430	HepG2	MATR3
RPL29	ENSG00000162244.6	5006.91760	7381.64250	-0.56000	3.04880	1.94400	HepG2	METAP2
RPL29	ENSG00000162244.6	4044.68230	5339.32560	-0.40060	2.29230	1.41550	HepG2	MTPAP
RPL29	ENSG00000162244.6	9282.91750	25174.50000	-1.43930	38.31330	36.16710	HepG2	NCBP2
RPL29	ENSG00000162244.6	11722.95240	22416.41520	-0.93520	17.37920	15.61780	HepG2	PABPC4
RPL29	ENSG00000162244.6	13535.17110	22825.84850	-0.75400	38.75080	36.94510	HepG2	PCBP1
RPL29	ENSG00000162244.6	7782.68570	5597.78310	0.47530	10.76170	9.35770	HepG2	PPIL4
RPL29	ENSG00000162244.6	4903.42150	6394.59890	-0.38310	3.81780	2.88850	HepG2	PRPF8
RPL29	ENSG00000162244.6	7375.02140	23226.29300	-1.65500	166.56060	163.96440	HepG2	PTBP1
RPL29	ENSG00000162244.6	9559.43480	12672.74930	-0.40670	3.99840	3.29660	HepG2	PUF60
RPL29	ENSG00000162244.6	15424.83870	13453.51130	0.19720	2.20170	1.66020	HepG2	PUM1
RPL29	ENSG00000162244.6	9845.09370	13443.16940	-0.44940	5.63760	4.69380	HepG2	PUM2
RPL29	ENSG00000162244.6	6010.13420	10967.19060	-0.86770	11.72840	10.61090	HepG2	PUS1
RPL29	ENSG00000162244.6	9923.48780	25154.35340	-1.34190	78.70560	76.21280	HepG2	QKI
RPL29	ENSG00000162244.6	7353.54510	3498.05030	1.07180	3.59190	1.49850	HepG2	RBM17
RPL29	ENSG00000162244.6	14516.69330	16341.62360	-0.17080	2.00530	1.54530	HepG2	RBM22
RPL29	ENSG00000162244.6	9932.17170	22829.30410	-1.20070	46.79320	44.34240	HepG2	RBM25
RPL29	ENSG00000162244.6	13516.59780	9584.37960	0.49590	3.80460	2.62960	HepG2	RBM27
RPL29	ENSG00000162244.6	10000.18920	25848.51890	-1.37010	123.39790	121.23250	HepG2	NELFE
RPL29	ENSG00000162244.6	12215.99390	24074.59150	-0.97870	67.09670	64.92480	HepG2	RECQL
RPL29	ENSG00000162244.6	3816.13520	6864.35060	-0.84700	9.98360	8.90460	HepG2	RPS19
RPL29	ENSG00000162244.6	5893.28170	8838.58730	-0.58470	3.75530	2.82770	HepG2	RPS2
RPL29	ENSG00000162244.6	5143.48600	6325.43780	-0.29840	2.23030	1.51750	HepG2	RRP9
RPL29	ENSG00000162244.6	6096.65950	10312.10320	-0.75820	3.26350	1.60100	HepG2	RTF1
RPL29	ENSG00000162244.6	8424.59630	5589.13340	0.59190	21.58880	20.03190	HepG2	SAFB2
RPL29	ENSG00000162244.6	14108.56200	9434.56010	0.58040	3.37570	1.93790	HepG2	SART3
RPL29	ENSG00000162244.6	3924.49660	5181.31470	-0.40080	4.47250	3.59220	HepG2	SF3B1
RPL29	ENSG00000162244.6	11810.63300	24181.32040	-1.03380	73.74010	71.49950	HepG2	SF3B4
RPL29	ENSG00000162244.6	15379.50570	12152.89170	0.33960	4.05000	3.22470	HepG2	SLBP
RPL29	ENSG00000162244.6	5661.11730	3017.94000	0.90740	3.09420	1.68840	HepG2	SNRNP200
RPL29	ENSG00000162244.6	16105.82010	18457.17870	-0.19660	3.79770	3.23860	HepG2	SRFBP1
RPL29	ENSG00000162244.6	10848.20300	7896.53880	0.45810	4.26020	2.31180	HepG2	SRP68
RPL29	ENSG00000162244.6	7928.39590	25240.16470	-1.67060	210.56380	208.18160	HepG2	SRSF1
RPL29	ENSG00000162244.6	13239.54600	20534.30580	-0.63320	30.64760	29.19120	HepG2	SRSF9
RPL29	ENSG00000162244.6	8247.18380	16025.05450	-0.95840	64.25780	62.60880	HepG2	SSB
RPL29	ENSG00000162244.6	12112.55980	14230.43200	-0.23250	1.90140	1.36820	HepG2	SUCLG1
RPL29	ENSG00000162244.6	5526.33940	8253.43370	-0.57870	7.02590	6.02640	HepG2	SUPV3L1
RPL29	ENSG00000162244.6	12350.17730	22687.12580	-0.87730	38.43310	36.65880	HepG2	TAF15
RPL29	ENSG00000162244.6	6643.07790	5102.92120	0.38040	4.06410	3.20490	HepG2	TARDBP
RPL29	ENSG00000162244.6	11994.69140	20846.07910	-0.79740	22.79270	20.46550	HepG2	TIA1
RPL29	ENSG00000162244.6	3196.77650	6098.28250	-0.93180	30.49940	29.16370	HepG2	TIAL1
RPL29	ENSG00000162244.6	8614.27420	6152.93810	0.48540	15.32680	14.14880	HepG2	TRIM56
RPL29	ENSG00000162244.6	6441.83890	9560.74100	-0.56960	2.63180	2.01790	HepG2	U2AF1
RPL29	ENSG00000162244.6	7526.76680	4875.26650	0.62640	7.93110	6.64830	HepG2	UCHL5
RPL29	ENSG00000162244.6	6190.27880	8457.83840	-0.45030	14.42660	13.06770	HepG2	UPF1
RPL29	ENSG00000162244.6	7564.06310	8693.48640	-0.20080	2.72680	1.68510	HepG2	UTP18
RPL29	ENSG00000162244.6	9718.83590	8165.71300	0.25110	4.94190	4.18080	HepG2	UTP3
RPL29	ENSG00000162244.6	6326.59870	9319.02310	-0.55870	2.50030	1.31060	HepG2	XRCC5
RPL29	ENSG00000162244.6	11877.07000	8124.61320	0.54770	6.45720	5.36470	HepG2	XRN2
RPL29	ENSG00000162244.6	6865.00970	9075.60680	-0.40270	13.08540	11.80370	HepG2	ZC3H8
RPL29	ENSG00000162244.6	7306.62200	9302.00540	-0.34830	12.07920	11.13750	HepG2	ZNF622
RPL29	ENSG00000162244.6	18658.66670	11574.87490	0.68870	33.29760	31.41270	K562	AGGF1
RPL29	ENSG00000162244.6	9871.89830	8451.64760	0.22400	2.95160	1.39410	K562	AKAP1
RPL29	ENSG00000162244.6	15390.33900	12718.83310	0.27500	2.65070	1.69450	K562	AKAP8
RPL29	ENSG00000162244.6	19623.72010	12044.13160	0.70420	4.63120	3.77930	K562	AKAP8L
RPL29	ENSG00000162244.6	16748.37230	12775.18740	0.39060	5.01620	4.26800	K562	AQR
RPL29	ENSG00000162244.6	16627.77480	12637.09820	0.39580	6.81400	5.29130	K562	ATP5C1
RPL29	ENSG00000162244.6	7430.50680	5629.45640	0.40040	4.13930	3.06770	K562	BOP1
RPL29	ENSG00000162244.6	7380.33880	5985.75010	0.30210	3.62540	2.72840	K562	CPSF6
RPL29	ENSG00000162244.6	11513.58280	9074.48380	0.34330	4.62600	2.29990	K562	DDX24
RPL29	ENSG00000162244.6	5684.22850	9599.85580	-0.75600	32.88070	30.88970	K562	DDX47
RPL29	ENSG00000162244.6	16030.88310	12960.66430	0.30660	4.68680	3.49900	K562	DKC1
RPL29	ENSG00000162244.6	3063.33760	4576.67260	-0.57920	3.00330	1.94990	K562	EIF3A
RPL29	ENSG00000162244.6	10099.90850	8058.03330	0.32570	5.23060	3.57110	K562	EIF4B
RPL29	ENSG00000162244.6	10819.41620	7810.50250	0.47000	10.22470	7.45860	K562	EWSR1
RPL29	ENSG00000162244.6	10048.15200	6243.93580	0.68630	4.47120	3.37400	K562	FIP1L1
RPL29	ENSG00000162244.6	10590.26070	8441.28570	0.32710	4.97180	2.40830	K562	FUBP3
RPL29	ENSG00000162244.6	6326.87440	9305.18380	-0.55650	12.49100	11.29880	K562	FXR1
RPL29	ENSG00000162244.6	10805.33080	7888.46260	0.45380	4.47830	2.61400	K562	G3BP1
RPL29	ENSG00000162244.6	4318.95620	7893.38820	-0.87000	5.23030	4.18730	K562	G3BP2
RPL29	ENSG00000162244.6	15260.38830	11598.29430	0.39580	3.84570	2.96040	K562	GRSF1
RPL29	ENSG00000162244.6	12843.54890	5371.15350	1.25760	3.00390	1.71830	K562	HNRNPA2B1
RPL29	ENSG00000162244.6	4647.64310	6337.69830	-0.44750	2.74070	2.14660	K562	HNRNPC
RPL29	ENSG00000162244.6	10449.15960	8675.83340	0.26820	2.79290	1.73170	K562	HNRNPL
RPL29	ENSG00000162244.6	7314.60830	5136.71210	0.50980	2.11170	1.30570	K562	HNRNPM
RPL29	ENSG00000162244.6	15929.86500	8464.06880	0.91220	8.72970	7.33090	K562	HSPD1
RPL29	ENSG00000162244.6	10997.72970	8254.77960	0.41380	2.90900	1.84940	K562	IGF2BP2
RPL29	ENSG00000162244.6	10765.78130	8394.54680	0.35880	2.42100	1.32650	K562	IGF2BP3
RPL29	ENSG00000162244.6	18132.86240	12782.01050	0.50440	8.41100	6.76970	K562	KIF1C
RPL29	ENSG00000162244.6	6687.39030	4879.79530	0.45450	3.39360	2.34740	K562	KRR1
RPL29	ENSG00000162244.6	13923.30270	10036.60550	0.47210	3.81010	2.73030	K562	NAA15
RPL29	ENSG00000162244.6	9373.46420	6712.79010	0.48160	4.11170	2.46020	K562	NONO
RPL29	ENSG00000162244.6	10714.98400	8262.86090	0.37480	13.49390	12.01990	K562	NSUN2
RPL29	ENSG00000162244.6	15175.89930	4692.79990	1.69320	7.02980	5.21110	K562	PABPN1
RPL29	ENSG00000162244.6	8572.26490	13377.17550	-0.64200	8.53740	7.07900	K562	PCBP3
RPL29	ENSG00000162244.6	6166.58660	10260.91290	-0.73460	19.23090	17.23160	K562	POLR2G
RPL29	ENSG00000162244.6	13253.84520	7089.52390	0.90260	3.85210	2.86030	K562	PPIG
RPL29	ENSG00000162244.6	14778.06930	5573.87240	1.40660	4.18180	2.25380	K562	PPP1R8
RPL29	ENSG00000162244.6	6025.76820	8425.01050	-0.48350	5.19710	4.31060	K562	PTBP1
RPL29	ENSG00000162244.6	12107.27060	16376.29900	-0.43570	6.49010	5.24060	K562	PUF60
RPL29	ENSG00000162244.6	22568.25380	11944.83510	0.91780	13.97810	12.80380	K562	PUS1
RPL29	ENSG00000162244.6	19584.97130	11638.14290	0.75080	26.25830	24.35490	K562	RBM15
RPL29	ENSG00000162244.6	10588.68400	7482.31770	0.50090	8.34150	5.87950	K562	RBM25
RPL29	ENSG00000162244.6	6666.78040	8499.55180	-0.35040	3.24150	2.04870	K562	NELFE
RPL29	ENSG00000162244.6	9920.80970	8008.76840	0.30880	3.32100	1.44750	K562	RECQL
RPL29	ENSG00000162244.6	4289.11370	6748.82380	-0.65400	8.16540	6.74670	K562	RPS19
RPL29	ENSG00000162244.6	5040.46480	9917.66610	-0.97640	20.41650	17.59190	K562	RPS3
RPL29	ENSG00000162244.6	9728.54350	6774.22480	0.52210	4.18290	2.54200	K562	RRP9
RPL29	ENSG00000162244.6	6531.30640	9142.20920	-0.48520	7.66240	5.90140	K562	SAFB
RPL29	ENSG00000162244.6	6775.54040	9452.21180	-0.48030	6.21700	4.07970	K562	SDAD1
RPL29	ENSG00000162244.6	11406.39560	4288.55250	1.41120	3.58050	2.15390	K562	SF1
RPL29	ENSG00000162244.6	11302.33770	8153.91920	0.47100	12.04820	10.44670	K562	SF3A3
RPL29	ENSG00000162244.6	9814.00540	8203.38360	0.25850	2.20770	1.44550	K562	SF3B4
RPL29	ENSG00000162244.6	14109.30090	5223.65100	1.43340	3.58150	2.02570	K562	SFPQ
RPL29	ENSG00000162244.6	6252.03500	4917.61590	0.34630	2.29810	1.38180	K562	SRFBP1
RPL29	ENSG00000162244.6	8703.22610	6618.22540	0.39500	4.14270	2.09340	K562	SRP68
RPL29	ENSG00000162244.6	6508.32700	8353.91900	-0.36020	8.95220	7.37280	K562	SRPK2
RPL29	ENSG00000162244.6	10448.42310	7801.90190	0.42130	4.88430	3.41530	K562	SRSF5
RPL29	ENSG00000162244.6	8500.78520	11679.59120	-0.45830	8.39280	5.82650	K562	SRSF9
RPL29	ENSG00000162244.6	6777.92780	5384.56810	0.33190	6.18350	4.14590	K562	SSB
RPL29	ENSG00000162244.6	8197.61200	10291.73760	-0.32820	4.21360	3.19490	K562	SYNCRIP
RPL29	ENSG00000162244.6	22572.37170	18467.22730	0.28950	2.84140	1.41960	K562	UBE2L3
RPL29	ENSG00000162244.6	6016.94240	7796.08020	-0.37370	7.95830	6.59410	K562	WDR43
RPL29	ENSG00000162244.6	17354.21410	14389.67090	0.27020	2.68360	1.83540	K562	ZC3H8
RPL29	ENSG00000162244.6	8735.91030	10943.70200	-0.32510	4.06540	1.86200	K562	ZNF800
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPL29 is not available on ENCORE database.

3 RBPs can affect the splicing of RPL29 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RPL29	ENSG00000162244.6	chr3	-	52029101	52029122			52027644	52028142	52029440	52029485	0.11100	0.00189	0.04217	included	HepG2	SRSF1
RI	RPL29	ENSG00000162244.6	chr3	-	52029436	52029636			52029436	52029485	52029609	52029636	0.23900	0.00422	0.02465	included	K562	AQR
MXE	RPL29	ENSG00000162244.6	chr3	-	52029057	52029093	52029101	52029122	52027644	52028142	52029440	52029485	-0.05300	0.00000	0.00000	2included	K562	CPSF6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPL29

General Information

Functions

Localization

Domains (AlphaFold: RPL29)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPL29 is not avaliable on ENCORE database.

17 proteins are bound to RPL29 RNA:

eCLIP assay for RPL29 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPL29 is not available on ENCORE database.

132 RBPs can affect the gene expression of RPL29 :

The Knockdown/knockout RNA-Seq assay for RPL29 is not available on ENCORE database.

3 RBPs can affect the splicing of RPL29 :

The Knockdown/knockout RNA-Seq assay for RPL29 is not avaliable on ENCORE database.