LIPA

General Information

Gene Name       : LIPA
Gene ID             : ENSG00000107798.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LIPA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LIPAENSG00000107798.1740.5131.6436.08ENCSR000AEF
HepG2LIPAENSG00000107798.1731.4254.1142.77ENCSR985KAT
K562LIPAENSG00000107798.170.040.110.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LIPA is not avaliable on ENCORE database.



Proteins bound to RNA
  • LIPA RNA is bound by 11 proteins.  







eCLIP assay for LIPA is not avaliable on ENCORE database.





11 proteins are bound to LIPA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr109097412790974151-3'-UTR,intron-Distal3.006703.01032HepG2LARP4
chr109097433890974398-3'-UTR,intron-Distal5.137659.40829HepG2TIA1
chr109097435090974365-3'-UTR,intron-Distal4.246104.49490HepG2TIAL1
chr109097367190973765-3'-UTR,intron-Distal3.348984.95252HepG2IGF2BP3
chr109097436590974398-3'-UTR,intron-Distal3.841204.56214HepG2TIAL1
chr109101145191011525-5'-UTR,intron-Distal3.220535.62208HepG2PRPF8
chr109101148791011587-5'-UTR,intron-Distal5.0314911.01919HepG2DDX3X
chr109097461890974657-CDS,intron-Distal6.6414415.20024HepG2SND1
chr109100730991007396-CDS,intron-Distal4.4080625.92625HepG2DDX3X
chr109098487090984932-CDS,intron-Distal4.1414412.93018HepG2SND1
chr109097470990974810-CDS,intron-Distal5.7647131.15652HepG2SND1
chr109098812890988159-CDS,intron-Distal,intron-Proximal3.775113.39363HepG2RPS3
chr109098799790988057-CDS,intron-Distal3.228553.95458HepG2RPS3
chr109098347690983554-CDS,intron-Distal4.012995.05467HepG2LIN28B
chr109098811090988147-CDS,intron-Distal3.478425.82787HepG2SND1
chr109097570590975742-CDS,intron-Distal4.587037.48518HepG2SND1
chr109098226790982286-CDS,intron-Distal,intron-Proximal4.245335.23222HepG2SND1
chr109100730291007388-CDS,intron-Distal6.0460922.03982HepG2RPS3
chr109098494190984975-CDS,intron-Distal4.845486.13895HepG2SND1
chr109098346990983548-CDS,intron-Distal5.8894211.22354HepG2SND1
chr109097465790974687-CDS,intron-Distal5.7912210.02894HepG2SND1
chr109098805290988102-CDS,intron-Distal4.4863210.36200HepG2SND1
chr109098798990988052-CDS,intron-Distal5.4056316.44850HepG2SND1
chr109097574290975767-CDS,intron-Distal,intron-Proximal4.525026.35450HepG2SND1
chr109098805790988128-CDS,intron-Distal4.669357.70706HepG2RPS3
chr109099923590999347-intron-Distal5.6719115.55599HepG2DKC1
chr109117062291170713-intron-Distal3.780446.01808HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LIPA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LIPA is not available on ENCORE database.

  • 132 RBPs can affect the levels of LIPA.  








The Knockdown/knockout RNA-Seq assay for LIPA is not available on ENCORE database.





132 RBPs can affect the gene expression of LIPA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LIPAENSG00000107798.131480.965602552.43340-0.7853012.5117010.48250HepG2AATF
LIPAENSG00000107798.131741.724603395.80820-0.9632016.6121014.66540HepG2ABCF1
LIPAENSG00000107798.131653.251703450.88760-1.0617055.3364053.47970HepG2ACO1
LIPAENSG00000107798.133132.571502552.688100.295202.263501.36110HepG2ADAR
LIPAENSG00000107798.133774.001509945.37480-1.3979019.6463018.36380HepG2AKAP1
LIPAENSG00000107798.134696.974808229.25090-0.809008.600607.26780HepG2ASCC1
LIPAENSG00000107798.132250.884902952.47920-0.391402.250301.41000HepG2BCCIP
LIPAENSG00000107798.136766.311902565.752601.3989034.7049032.12100HepG2BCLAF1
LIPAENSG00000107798.132648.031802162.980900.291802.427801.86300HepG2BOP1
LIPAENSG00000107798.133838.035502543.779000.593309.363907.24670HepG2BUD13
LIPAENSG00000107798.137647.247802920.010901.3889040.8585038.64850HepG2CALR
LIPAENSG00000107798.135055.368903426.028800.561204.809003.50830HepG2CCAR1
LIPAENSG00000107798.139742.738607818.261800.317402.785302.01040HepG2CIRBP
LIPAENSG00000107798.134950.499901985.738501.3178036.6749034.57500HepG2CPSF6
LIPAENSG00000107798.133086.022403814.02200-0.305604.644603.85010HepG2CELF1
LIPAENSG00000107798.136171.186104101.085000.5894026.1795024.33430HepG2DAZAP1
LIPAENSG00000107798.131814.973103191.47530-0.8143034.6512032.56040HepG2DDX19B
LIPAENSG00000107798.136079.811702817.486701.1095030.6386028.74690HepG2DDX21
LIPAENSG00000107798.136260.026202755.984601.1835041.5888038.67080HepG2DDX24
LIPAENSG00000107798.132846.344002199.529000.371803.547901.96720HepG2DDX28
LIPAENSG00000107798.132288.638601482.428600.626408.578206.45130HepG2DDX47
LIPAENSG00000107798.137428.203703150.721101.2372033.0643030.39340HepG2DDX5
LIPAENSG00000107798.132900.952808182.89310-1.4961023.8384022.27680HepG2DDX6
LIPAENSG00000107798.134666.045802479.178400.9122017.5672015.46930HepG2DHX30
LIPAENSG00000107798.136462.756503301.507300.9689047.4188045.51310HepG2DKC1
LIPAENSG00000107798.134291.659902570.427200.7394012.6094011.19950HepG2DNAJC21
LIPAENSG00000107798.133462.811002668.315900.375902.975202.02110HepG2EEF2
LIPAENSG00000107798.131978.682302575.59740-0.380404.682003.18210HepG2EIF2S2
LIPAENSG00000107798.131572.607902166.20220-0.462003.437502.43580HepG2EIF3D
LIPAENSG00000107798.134252.591908465.06090-0.9932012.6913011.27220HepG2EIF4B
LIPAENSG00000107798.1310425.902403875.732001.4275045.3116042.61960HepG2EIF4G2
LIPAENSG00000107798.134113.811402941.276700.483905.629004.12190HepG2ESF1
LIPAENSG00000107798.132362.176303966.28870-0.7477010.677909.62180HepG2ETF1
LIPAENSG00000107798.13599.645001935.80090-1.6907037.4052033.44170HepG2FAM120A
LIPAENSG00000107798.131928.708403428.83620-0.8301011.7317010.30280HepG2FIP1L1
LIPAENSG00000107798.133368.635902416.287300.479304.963703.30020HepG2FKBP4
LIPAENSG00000107798.133070.615701989.133400.626302.528501.55990HepG2FTO
LIPAENSG00000107798.133961.506905213.90540-0.396302.412701.67790HepG2FUBP3
LIPAENSG00000107798.132326.065708771.38880-1.9149032.1737030.14240HepG2FXR1
LIPAENSG00000107798.132939.989008137.86260-1.4688020.8054019.06100HepG2G3BP1
LIPAENSG00000107798.135580.499902251.000801.3097028.6903026.88860HepG2GPKOW
LIPAENSG00000107798.132378.383703294.47610-0.4701010.753009.00580HepG2HDGF
LIPAENSG00000107798.134540.981303768.978400.268703.330202.31730HepG2HNRNPA2B1
LIPAENSG00000107798.13833.426401370.84590-0.717906.377704.16270HepG2HNRNPAB
LIPAENSG00000107798.134725.289302886.521000.7110013.1914011.78380HepG2HNRNPC
LIPAENSG00000107798.132385.121301964.642700.279703.306402.52780HepG2HNRNPF
LIPAENSG00000107798.135025.739708237.72400-0.712908.913107.71490HepG2HNRNPK
LIPAENSG00000107798.137151.899102148.170501.7351059.1340056.84280HepG2HNRNPLL
LIPAENSG00000107798.131320.597302365.43070-0.8409017.6483015.59580HepG2HNRNPM
LIPAENSG00000107798.132487.212502867.43670-0.205202.523501.94470HepG2HNRNPU
LIPAENSG00000107798.133794.182702615.450500.536604.600903.02180HepG2HSPD1
LIPAENSG00000107798.133159.084001934.594600.7074014.1740012.66960HepG2IGF2BP1
LIPAENSG00000107798.1311269.513008272.355600.446004.820003.95070HepG2IGF2BP2
LIPAENSG00000107798.133549.017907761.65350-1.128906.982205.46080HepG2IGF2BP3
LIPAENSG00000107798.132252.129802928.99090-0.379107.517006.37260HepG2ILF2
LIPAENSG00000107798.132177.772101581.878500.461103.287301.96080HepG2KHDRBS1
LIPAENSG00000107798.135067.998808319.83550-0.715107.546005.80870HepG2KHSRP
LIPAENSG00000107798.133850.954402613.356700.559203.924402.43030HepG2KRR1
LIPAENSG00000107798.135786.945803616.266300.678206.948405.62080HepG2LARP4
LIPAENSG00000107798.135017.202608823.89530-0.814509.844008.71010HepG2MATR3
LIPAENSG00000107798.131175.328502267.21400-0.947908.532106.78810HepG2METAP2
LIPAENSG00000107798.134025.756602774.569000.536907.970206.66190HepG2MSI2
LIPAENSG00000107798.135091.399302190.829501.2165015.7483013.46420HepG2MTPAP
LIPAENSG00000107798.133542.618502329.937100.604409.320807.14910HepG2NAA15
LIPAENSG00000107798.137416.148809032.02740-0.284401.940401.40480HepG2NCBP2
LIPAENSG00000107798.133093.759702440.963600.341802.945701.48830HepG2NIP7
LIPAENSG00000107798.133350.991002478.427500.435102.734501.31440HepG2NKRF
LIPAENSG00000107798.132714.255604066.62340-0.5833012.5130010.94600HepG2NOL12
LIPAENSG00000107798.135783.775801904.755601.6023056.3193053.81780HepG2NSUN2
LIPAENSG00000107798.132748.659701517.284400.857106.472605.07650HepG2PABPC1
LIPAENSG00000107798.131953.018202838.26560-0.5393012.8094011.20660HepG2PARN
LIPAENSG00000107798.136213.566707806.49010-0.329303.725503.04350HepG2PCBP1
LIPAENSG00000107798.133821.473302591.460900.560305.450103.17240HepG2PHF6
LIPAENSG00000107798.131288.468301791.37280-0.475405.427903.72390HepG2PKM
LIPAENSG00000107798.133442.845702540.136400.438603.379701.43120HepG2PPIG
LIPAENSG00000107798.133218.144102557.523600.331404.765803.82440HepG2PPIL4
LIPAENSG00000107798.133563.405201998.083600.8345030.6161028.59500HepG2PRPF4
LIPAENSG00000107798.133499.359502240.030100.643508.971907.60870HepG2PRPF8
LIPAENSG00000107798.132416.935507942.93700-1.7165040.4902038.91010HepG2PTBP1
LIPAENSG00000107798.138487.587203881.927001.1285035.4078033.57150HepG2PUF60
LIPAENSG00000107798.132549.717104120.81240-0.6926032.7393031.15890HepG2PUM1
LIPAENSG00000107798.133093.251404117.81760-0.412806.327205.32750HepG2PUM2
LIPAENSG00000107798.132533.903203514.92060-0.4721012.7126011.55590HepG2PUS1
LIPAENSG00000107798.134146.397608603.37440-1.0530020.0461018.58280HepG2QKI
LIPAENSG00000107798.131191.521503334.13500-1.4845012.1943010.79740HepG2RAVER1
LIPAENSG00000107798.132616.991604298.10600-0.715808.417407.02940HepG2RBM15
LIPAENSG00000107798.132511.143203315.14070-0.400704.031903.43700HepG2RBM22
LIPAENSG00000107798.132249.863703254.87170-0.532802.383301.47130HepG2RBM27
LIPAENSG00000107798.132774.851608840.10730-1.6717038.2754036.77220HepG2NELFE
LIPAENSG00000107798.132979.140708232.66730-1.4665035.0394033.32020HepG2RECQL
LIPAENSG00000107798.132848.813502116.665200.428504.320903.49720HepG2RPLP0
LIPAENSG00000107798.133662.676201667.019301.1355015.6031013.76300HepG2RPS3A
LIPAENSG00000107798.131880.518803064.22790-0.704404.372403.00690HepG2RPS5
LIPAENSG00000107798.131978.701203625.97170-0.873806.874904.55490HepG2RTF1
LIPAENSG00000107798.136171.358702553.576501.27300100.8048098.01680HepG2SAFB2
LIPAENSG00000107798.132147.847201569.785500.452203.206601.80470HepG2SART3
LIPAENSG00000107798.132548.693601583.532800.686504.852002.84700HepG2SBDS
LIPAENSG00000107798.132704.585102115.581200.354303.192502.18020HepG2SERBP1
LIPAENSG00000107798.134199.450605657.75060-0.430002.798402.12080HepG2SF3A3
LIPAENSG00000107798.132969.615802126.271100.481905.606604.63030HepG2SF3B1
LIPAENSG00000107798.134030.283908270.44510-1.0371019.3147017.97800HepG2SF3B4
LIPAENSG00000107798.136472.024503722.112400.7980047.1785045.03490HepG2SLBP
LIPAENSG00000107798.131881.493602977.89700-0.6624026.5220024.86250HepG2SMN1
LIPAENSG00000107798.132027.370503744.43080-0.8851013.8236012.93140HepG2SRFBP1
LIPAENSG00000107798.134510.726508632.21840-0.9364017.3756016.40550HepG2SRSF1
LIPAENSG00000107798.134318.294403832.808000.172002.063901.51370HepG2SRSF5
LIPAENSG00000107798.132813.560501930.257400.5435012.2841010.99750HepG2SRSF7
LIPAENSG00000107798.133112.342607022.48030-1.1740024.5353023.19660HepG2SRSF9
LIPAENSG00000107798.139173.242203251.229401.4963082.3548080.55720HepG2SSB
LIPAENSG00000107798.131306.774202605.77890-0.9957014.4916011.97860HepG2SSRP1
LIPAENSG00000107798.131017.013401450.16570-0.511903.572902.30810HepG2STIP1
LIPAENSG00000107798.132612.298704358.98390-0.7387033.3321031.58570HepG2SUCLG1
LIPAENSG00000107798.134944.777202314.879801.0949032.1938029.48590HepG2SUPT6H
LIPAENSG00000107798.135376.372302889.876600.8955015.2380013.87450HepG2SUPV3L1
LIPAENSG00000107798.136861.873502093.770601.7124064.6809062.06000HepG2TARDBP
LIPAENSG00000107798.134914.515007129.57300-0.536804.859903.76320HepG2TIA1
LIPAENSG00000107798.133655.763302786.232900.391805.514004.85670HepG2TIAL1
LIPAENSG00000107798.133213.753002811.158800.193002.446401.90910HepG2TRIM56
LIPAENSG00000107798.133871.692302932.857900.400603.604102.89090HepG2U2AF1
LIPAENSG00000107798.132963.232204014.20970-0.437903.853602.85910HepG2UBE2L3
LIPAENSG00000107798.13243.984401707.29540-2.8069047.1677044.32940HepG2UCHL5
LIPAENSG00000107798.136164.484005017.556700.296906.332105.34690HepG2UPF1
LIPAENSG00000107798.133823.947805157.37010-0.431609.587607.77630HepG2UTP18
LIPAENSG00000107798.133837.966204844.25860-0.335907.440606.53660HepG2UTP3
LIPAENSG00000107798.132341.175901493.160100.648805.231103.71650HepG2XPO5
LIPAENSG00000107798.132117.088703277.63790-0.630603.961802.44160HepG2XRCC5
LIPAENSG00000107798.132623.153603666.11370-0.482902.760601.70730HepG2XRCC6
LIPAENSG00000107798.131716.486202844.75970-0.728806.786005.66500HepG2XRN2
LIPAENSG00000107798.133253.553001971.816500.7224029.0677027.32370HepG2ZC3H8
LIPAENSG00000107798.139588.202005518.356300.7969057.3630055.70890HepG2ZNF622
LIPAENSG00000107798.1313.059800.686404.249902.293701.60210K562GRSF1
LIPAENSG00000107798.133.0050015.21780-2.340302.140701.41590K562SF3A3
LIPAENSG00000107798.130.9627014.54880-3.917603.327802.40730K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LIPA is not available on ENCORE database.






No RBPs affect the alternative splcing events of LIPA on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LIPA is not avaliable on ENCORE database.