HAGH

General Information

Gene Name : HAGH
Gene ID : ENSG00000063854.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HAGH)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HAGH	ENSG00000063854.12	4.93	13.55	9.24	ENCSR000AEF
HepG2	HAGH	ENSG00000063854.12	94.44	42.68	68.56	ENCSR985KAT
K562	HAGH	ENSG00000063854.12	12.68	13.15	12.91	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HAGH is not avaliable on ENCORE database.

Proteins bound to RNA

HAGH RNA is bound by 23 proteins.

CanvasJS.com

eCLIP assay for HAGH is not avaliable on ENCORE database.

23 proteins are bound to HAGH RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	1876731	1876802	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.49561	40.35376	HepG2	DDX3X
chr16	1876709	1876731	-	5'-UTR,CDS,intron-Distal	4.93294	22.63861	HepG2	DDX3X
chr16	1868688	1868773	-	intron-Distal	3.87060	12.96916	HepG2	XPO5
chr16	1859198	1859273	-	3'-UTR,intron-Distal,intron-Proximal	3.95899	12.73464	HepG2	LARP4
chr16	1867733	1867837	-	intron-Distal	3.88832	11.90884	HepG2	CSTF2T
chr16	1868321	1868406	-	intron-Distal	3.96671	11.24360	HepG2	CSTF2T
chr16	1867972	1868090	-	intron-Distal	4.07720	10.99059	HepG2	CSTF2T
chr16	1876510	1876566	-	5'-UTR,intron-Distal,intron-Proximal	5.39775	10.32974	HepG2	DDX3X
chr16	1867431	1867539	-	intron-Distal	4.05224	8.41080	HepG2	PRPF4
chr16	1872176	1872316	-	CDS,intron-Distal,intron-Proximal	3.18692	8.08800	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 54 entries

eCLIP assay for HAGH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HAGH is not available on ENCORE database.
108 RBPs can affect the levels of HAGH.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HAGH is not available on ENCORE database.

108 RBPs can affect the gene expression of HAGH :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HAGH	ENSG00000063854.8	751.09180	1909.92560	-1.34650	52.72920	51.06730	HepG2	NELFE
HAGH	ENSG00000063854.8	1813.10410	575.40760	1.65570	48.82780	47.20820	HepG2	TIAL1
HAGH	ENSG00000063854.8	653.20580	1517.24270	-1.21580	43.70170	42.03090	HepG2	SRSF9
HAGH	ENSG00000063854.8	1404.88540	386.79130	1.86070	43.79030	41.76560	HepG2	HNRNPLL
HAGH	ENSG00000063854.8	779.98780	1786.79380	-1.19580	42.21830	40.43400	HepG2	SF3B4
HAGH	ENSG00000063854.8	444.03740	1103.87630	-1.31380	36.58630	34.77670	HepG2	UTP3
HAGH	ENSG00000063854.8	493.17680	1097.43680	-1.15400	33.37720	31.83250	HepG2	ACO1
HAGH	ENSG00000063854.8	621.55060	1268.86640	-1.02960	28.52500	27.35700	HepG2	SRFBP1
HAGH	ENSG00000063854.8	495.79360	1123.43660	-1.18010	27.77020	26.46840	HepG2	RBM22
HAGH	ENSG00000063854.8	1013.10810	1864.99290	-0.88040	26.26990	25.13760	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 118 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HAGH is not available on ENCORE database.

15 RBPs can affect the splicing of HAGH :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224			1867168	1867272	1869897	1870015	-0.27500	0.00000	0.00001	excluded	K562	AKAP8L
SE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224			1867168	1867272	1869897	1870015	-0.27300	0.00000	0.00000	excluded	K562	RBM15
SE	HAGH	ENSG00000063854.8	chr16	-	1876507	1876603			1872865	1873038	1876712	1876842	0.34400	0.00000	0.00098	included	HepG2	PRPF4
MXE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224	1869897	1870015	1867168	1867272	1872865	1873038	0.26800	0.00000	0.00000	1included	K562	RBM15
MXE	HAGH	ENSG00000063854.8	chr16	-	1869897	1870015	1872865	1873038	1869115	1869224	1876507	1876603	0.13300	0.00000	0.00000	1included	HepG2	NCBP2
SE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224			1867168	1867272	1869897	1870015	-0.18000	0.00009	0.00411	excluded	K562	AGGF1
SE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224			1867168	1867272	1869897	1870015	-0.11900	0.00010	0.00292	excluded	HepG2	U2AF1
SE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224			1867168	1867272	1869897	1870015	0.12300	0.00012	0.00913	included	HepG2	SFPQ
MXE	HAGH	ENSG00000063854.8	chr16	-	1867168	1867272	1869115	1869224	1866893	1866995	1869897	1870015	-0.15100	0.00013	0.00871	2included	K562	AKAP8L
MXE	HAGH	ENSG00000063854.8	chr16	-	1869115	1869224	1869897	1870015	1867168	1867272	1872865	1873038	-0.06000	0.00014	0.01352	2included	HepG2	TBRG4

Showing 1 to 10 of 24 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HAGH

General Information

Functions

Localization

Domains (AlphaFold: HAGH)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HAGH is not avaliable on ENCORE database.

23 proteins are bound to HAGH RNA:

eCLIP assay for HAGH is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HAGH is not available on ENCORE database.

108 RBPs can affect the gene expression of HAGH :

The Knockdown/knockout RNA-Seq assay for HAGH is not available on ENCORE database.

15 RBPs can affect the splicing of HAGH :

The Knockdown/knockout RNA-Seq assay for HAGH is not avaliable on ENCORE database.