The Knockdown/knockout RNA-Seq assay for CA1 is not available on ENCORE database.
121 RBPs can affect the gene expression of CA1 :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
CA1 | ENSG00000133742.9 | 263.85460 | 838.45200 | -1.66800 | 22.29210 | 19.08510 | K562 | AARS | |
CA1 | ENSG00000133742.9 | 2282.65840 | 469.20450 | 2.28230 | 5.29740 | 2.93280 | K562 | ADAR | |
CA1 | ENSG00000133742.9 | 1208.56910 | 621.70200 | 0.95890 | 22.31620 | 20.81340 | K562 | AGGF1 | |
CA1 | ENSG00000133742.9 | 582.43110 | 362.42910 | 0.68430 | 3.52380 | 1.79700 | K562 | AKAP1 | |
CA1 | ENSG00000133742.9 | 1104.72660 | 683.11320 | 0.69340 | 7.01660 | 5.27260 | K562 | AKAP8 | |
CA1 | ENSG00000133742.9 | 1611.97990 | 646.89840 | 1.31710 | 30.00420 | 27.41900 | K562 | AKAP8L | |
CA1 | ENSG00000133742.9 | 1027.51280 | 1351.92260 | -0.39590 | 3.57650 | 2.14730 | K562 | APOBEC3C | |
CA1 | ENSG00000133742.9 | 4792.64510 | 1234.13440 | 1.95720 | 77.14000 | 74.42870 | K562 | AQR | |
CA1 | ENSG00000133742.9 | 1178.00880 | 678.73210 | 0.79530 | 14.40150 | 12.12480 | K562 | ATP5C1 | |
CA1 | ENSG00000133742.9 | 1030.51670 | 459.52230 | 1.16510 | 3.50400 | 2.28900 | K562 | CCAR1 | |
CA1 | ENSG00000133742.9 | 469.49520 | 743.00260 | -0.66230 | 7.68580 | 5.71610 | K562 | CCDC124 | |
CA1 | ENSG00000133742.9 | 3078.25650 | 1848.26990 | 0.73580 | 3.33270 | 1.66530 | K562 | CEBPZ | |
CA1 | ENSG00000133742.9 | 2791.88720 | 2086.68030 | 0.41990 | 2.84690 | 1.38960 | K562 | CKAP4 | |
CA1 | ENSG00000133742.9 | 4220.42270 | 966.50160 | 2.12640 | 21.73900 | 18.97850 | K562 | CNOT7 | |
CA1 | ENSG00000133742.9 | 3207.26850 | 1708.49080 | 0.90850 | 22.71090 | 20.42980 | K562 | CPSF6 | |
CA1 | ENSG00000133742.9 | 1446.89290 | 491.15790 | 1.55860 | 4.97680 | 2.44060 | K562 | CPSF7 | |
CA1 | ENSG00000133742.9 | 1210.15450 | 501.83250 | 1.26980 | 5.23210 | 2.74490 | K562 | YBX3 | |
CA1 | ENSG00000133742.9 | 6310.93310 | 1883.72860 | 1.74420 | 93.94560 | 90.29590 | K562 | CELF1 | |
CA1 | ENSG00000133742.9 | 543.47200 | 729.42580 | -0.42460 | 3.08540 | 1.52950 | K562 | DDX19B | |
CA1 | ENSG00000133742.9 | 4141.78100 | 2124.73800 | 0.96290 | 6.39080 | 4.51460 | K562 | DDX21 | |
CA1 | ENSG00000133742.9 | 500.21120 | 857.86260 | -0.77820 | 4.81870 | 3.06150 | K562 | DDX27 | |
CA1 | ENSG00000133742.9 | 552.00930 | 772.02590 | -0.48400 | 3.72720 | 1.31420 | K562 | DDX28 | |
CA1 | ENSG00000133742.9 | 2529.78780 | 1529.84420 | 0.72550 | 20.57740 | 18.95440 | K562 | DDX47 | |
CA1 | ENSG00000133742.9 | 1369.69200 | 514.52060 | 1.41250 | 20.19190 | 16.61800 | K562 | DHX30 | |
CA1 | ENSG00000133742.9 | 533.50180 | 696.17590 | -0.38400 | 3.41120 | 2.42450 | K562 | DKC1 | |
CA1 | ENSG00000133742.9 | 2571.66720 | 523.73730 | 2.29570 | 15.52360 | 11.93950 | K562 | DNAJC2 | |
CA1 | ENSG00000133742.9 | 1436.56050 | 747.77880 | 0.94180 | 10.13210 | 7.80180 | K562 | EEF2 | |
CA1 | ENSG00000133742.9 | 317.13890 | 872.90000 | -1.46070 | 36.29290 | 34.26520 | K562 | EIF2S2 | |
CA1 | ENSG00000133742.9 | 374.24120 | 773.26620 | -1.04700 | 11.58950 | 9.29760 | K562 | EIF3D | |
CA1 | ENSG00000133742.9 | 585.33770 | 383.80520 | 0.60880 | 2.02080 | 1.31670 | K562 | EIF4A3 | |
CA1 | ENSG00000133742.9 | 2440.46960 | 1532.10980 | 0.67150 | 15.82670 | 13.68990 | K562 | EIF4G2 | |
CA1 | ENSG00000133742.9 | 1981.33270 | 1324.63040 | 0.58080 | 4.41420 | 2.31490 | K562 | ESF1 | |
CA1 | ENSG00000133742.9 | 2908.44850 | 3907.04430 | -0.42580 | 3.57030 | 2.10630 | K562 | EXOSC5 | |
CA1 | ENSG00000133742.9 | 402.73720 | 643.24540 | -0.67550 | 4.63820 | 2.41930 | K562 | FAM120A | |
CA1 | ENSG00000133742.9 | 2522.89450 | 1245.87530 | 1.01780 | 21.04380 | 18.47330 | K562 | FIP1L1 | |
CA1 | ENSG00000133742.9 | 1314.22100 | 1738.54230 | -0.40370 | 3.51540 | 2.54830 | K562 | FMR1 | |
CA1 | ENSG00000133742.9 | 1229.44920 | 2214.71700 | -0.84910 | 6.30900 | 3.16860 | K562 | FXR2 | |
CA1 | ENSG00000133742.9 | 526.88470 | 363.25360 | 0.53640 | 4.09910 | 2.31990 | K562 | G3BP1 | |
CA1 | ENSG00000133742.9 | 849.05870 | 512.52760 | 0.72810 | 4.66190 | 3.69110 | K562 | G3BP2 | |
CA1 | ENSG00000133742.9 | 2476.20690 | 861.84170 | 1.52250 | 35.07670 | 31.93940 | K562 | GLRX3 | |
CA1 | ENSG00000133742.9 | 3152.49890 | 1631.10840 | 0.95050 | 20.88970 | 18.58350 | K562 | GPKOW | |
CA1 | ENSG00000133742.9 | 2771.67700 | 1163.18490 | 1.25260 | 34.67880 | 31.89230 | K562 | GRSF1 | |
CA1 | ENSG00000133742.9 | 1103.24400 | 797.25420 | 0.46850 | 4.19120 | 1.65230 | K562 | GRWD1 | |
CA1 | ENSG00000133742.9 | 2722.13670 | 868.31200 | 1.64840 | 8.49780 | 5.40170 | K562 | HNRNPA0 | |
CA1 | ENSG00000133742.9 | 2524.82030 | 808.94190 | 1.64200 | 13.60600 | 11.51320 | K562 | HNRNPA1 | |
CA1 | ENSG00000133742.9 | 1582.01780 | 916.87940 | 0.78690 | 12.75000 | 11.54530 | K562 | HNRNPC | |
CA1 | ENSG00000133742.9 | 1253.77750 | 819.01920 | 0.61420 | 7.38190 | 5.44800 | K562 | HNRNPF | |
CA1 | ENSG00000133742.9 | 2273.18290 | 1382.51040 | 0.71730 | 2.48930 | 1.49260 | K562 | HNRNPL | |
CA1 | ENSG00000133742.9 | 457.90630 | 1024.70430 | -1.16210 | 15.68740 | 13.06460 | K562 | HNRNPM | |
CA1 | ENSG00000133742.9 | 1814.76530 | 895.73000 | 1.01850 | 15.41190 | 13.40630 | K562 | HNRNPU | |
CA1 | ENSG00000133742.9 | 1330.72510 | 1689.20690 | -0.34410 | 2.87240 | 2.06200 | K562 | HSPD1 | |
CA1 | ENSG00000133742.9 | 1304.36750 | 480.17280 | 1.44160 | 18.31240 | 15.04330 | K562 | ILF3 | |
CA1 | ENSG00000133742.9 | 1319.30400 | 463.81490 | 1.50810 | 24.93060 | 21.36050 | K562 | KHDRBS1 | |
CA1 | ENSG00000133742.9 | 1330.06310 | 1764.81640 | -0.40800 | 5.17030 | 2.59700 | K562 | CCAR2 | |
CA1 | ENSG00000133742.9 | 977.06960 | 686.55830 | 0.50900 | 3.70590 | 2.73240 | K562 | KIF1C | |
CA1 | ENSG00000133742.9 | 555.30500 | 888.60860 | -0.67830 | 4.49240 | 2.66280 | K562 | LARP7 | |
CA1 | ENSG00000133742.9 | 1463.23760 | 930.44470 | 0.65310 | 7.26500 | 4.70110 | K562 | LIN28B | |
CA1 | ENSG00000133742.9 | 396.37320 | 818.13020 | -1.04550 | 7.74190 | 5.13760 | K562 | LSM11 | |
CA1 | ENSG00000133742.9 | 534.35820 | 399.32440 | 0.42010 | 2.29550 | 1.52580 | K562 | MAGOH | |
CA1 | ENSG00000133742.9 | 954.57700 | 398.55420 | 1.26000 | 25.01040 | 22.20020 | K562 | MATR3 | |
CA1 | ENSG00000133742.9 | 2608.12240 | 1592.17750 | 0.71190 | 12.36380 | 10.44070 | K562 | METAP2 | |
CA1 | ENSG00000133742.9 | 2321.45460 | 1633.09520 | 0.50730 | 6.20140 | 4.52740 | K562 | MSI2 | |
CA1 | ENSG00000133742.9 | 2947.61710 | 906.08410 | 1.70170 | 58.77760 | 55.97410 | K562 | MTPAP | |
CA1 | ENSG00000133742.9 | 865.26250 | 539.08960 | 0.68250 | 2.92690 | 2.01600 | K562 | NAA15 | |
CA1 | ENSG00000133742.9 | 4312.24670 | 1675.82650 | 1.36350 | 5.32840 | 3.20840 | K562 | NOL12 | |
CA1 | ENSG00000133742.9 | 3314.35750 | 1006.90940 | 1.71870 | 59.98650 | 57.28610 | K562 | NSUN2 | |
CA1 | ENSG00000133742.9 | 1349.20810 | 757.90600 | 0.83190 | 8.28220 | 5.27840 | K562 | PA2G4 | |
CA1 | ENSG00000133742.9 | 1635.87700 | 576.25650 | 1.50520 | 4.59620 | 3.23130 | K562 | PABPN1 | |
CA1 | ENSG00000133742.9 | 1098.04720 | 460.78110 | 1.25270 | 9.59550 | 5.94480 | K562 | PARN | |
CA1 | ENSG00000133742.9 | 8223.33870 | 4969.72970 | 0.72650 | 10.61440 | 8.98920 | K562 | PCBP3 | |
CA1 | ENSG00000133742.9 | 999.11370 | 684.55100 | 0.54540 | 4.19900 | 1.88220 | K562 | PES1 | |
CA1 | ENSG00000133742.9 | 400.83520 | 886.30150 | -1.14480 | 6.96190 | 4.41710 | K562 | PKM | |
CA1 | ENSG00000133742.9 | 1929.24110 | 1414.24860 | 0.44790 | 4.29710 | 3.24410 | K562 | PPIG | |
CA1 | ENSG00000133742.9 | 522.59160 | 702.97100 | -0.42780 | 2.84420 | 2.08520 | K562 | PRPF8 | |
CA1 | ENSG00000133742.9 | 458.86450 | 822.14650 | -0.84130 | 7.42230 | 5.80370 | K562 | PSIP1 | |
CA1 | ENSG00000133742.9 | 88.73760 | 387.94900 | -2.12830 | 17.78480 | 16.17330 | K562 | PTBP1 | |
CA1 | ENSG00000133742.9 | 1103.77320 | 641.62200 | 0.78250 | 9.26650 | 8.32310 | K562 | PUS1 | |
CA1 | ENSG00000133742.9 | 1576.80050 | 625.10080 | 1.33470 | 39.81420 | 37.46340 | K562 | RBM15 | |
CA1 | ENSG00000133742.9 | 3073.80330 | 1103.14960 | 1.47830 | 11.67130 | 8.59120 | K562 | RBM17 | |
CA1 | ENSG00000133742.9 | 244.09630 | 362.65590 | -0.57120 | 3.13220 | 1.62600 | K562 | RBM34 | |
CA1 | ENSG00000133742.9 | 184.99680 | 391.58460 | -1.08180 | 5.36040 | 3.77390 | K562 | NELFE | |
CA1 | ENSG00000133742.9 | 2097.06330 | 788.92500 | 1.41030 | 4.35400 | 1.66500 | K562 | DROSHA | |
CA1 | ENSG00000133742.9 | 1030.43290 | 358.88420 | 1.52160 | 13.75360 | 10.67050 | K562 | RPS10 | |
CA1 | ENSG00000133742.9 | 447.97060 | 715.91580 | -0.67640 | 5.12650 | 4.01200 | K562 | RPS19 | |
CA1 | ENSG00000133742.9 | 1946.29010 | 2597.96120 | -0.41670 | 3.83290 | 2.62990 | K562 | RPS3 | |
CA1 | ENSG00000133742.9 | 2451.54100 | 718.60720 | 1.77030 | 32.78020 | 28.89550 | K562 | RRP9 | |
CA1 | ENSG00000133742.9 | 2196.47650 | 934.31210 | 1.23310 | 3.97190 | 1.76610 | K562 | SAFB2 | |
CA1 | ENSG00000133742.9 | 3025.35440 | 880.78890 | 1.78010 | 9.77860 | 6.86720 | K562 | SBDS | |
CA1 | ENSG00000133742.9 | 5277.46200 | 3511.77020 | 0.58750 | 4.63720 | 2.75170 | K562 | SDAD1 | |
CA1 | ENSG00000133742.9 | 994.42890 | 601.42110 | 0.72540 | 4.96300 | 2.87540 | K562 | SERBP1 | |
CA1 | ENSG00000133742.9 | 1995.66000 | 993.31180 | 1.00640 | 12.25330 | 10.63870 | K562 | SF3A3 | |
CA1 | ENSG00000133742.9 | 1775.34150 | 505.96310 | 1.81090 | 44.34650 | 40.45980 | K562 | SLBP | |
CA1 | ENSG00000133742.9 | 1067.99270 | 702.14850 | 0.60500 | 3.31910 | 1.49530 | K562 | SRP68 | |
CA1 | ENSG00000133742.9 | 3683.48850 | 1017.64680 | 1.85570 | 17.55550 | 15.49030 | K562 | SRPK2 | |
CA1 | ENSG00000133742.9 | 137.18650 | 380.28990 | -1.47100 | 11.80200 | 10.34830 | K562 | SRSF1 | |
CA1 | ENSG00000133742.9 | 4685.80620 | 1896.81960 | 1.30460 | 10.82490 | 8.48640 | K562 | SRSF7 | |
CA1 | ENSG00000133742.9 | 6280.62680 | 4338.57190 | 0.53360 | 10.39030 | 7.56080 | K562 | SRSF9 | |
CA1 | ENSG00000133742.9 | 1062.63640 | 375.80970 | 1.49950 | 41.28860 | 37.21950 | K562 | SSB | |
CA1 | ENSG00000133742.9 | 2959.79340 | 1634.73510 | 0.85630 | 14.69480 | 11.41170 | K562 | SSRP1 | |
CA1 | ENSG00000133742.9 | 2380.08570 | 1458.54980 | 0.70640 | 15.21740 | 12.32460 | K562 | SUCLG1 | |
CA1 | ENSG00000133742.9 | 2447.70410 | 741.76840 | 1.72230 | 8.23620 | 4.62490 | K562 | SUGP2 | |
CA1 | ENSG00000133742.9 | 2073.16170 | 723.72310 | 1.51820 | 4.83240 | 2.76630 | K562 | SUPT6H | |
CA1 | ENSG00000133742.9 | 1707.57960 | 680.37890 | 1.32740 | 8.48170 | 6.66210 | K562 | SUPV3L1 | |
CA1 | ENSG00000133742.9 | 1514.06970 | 3823.54470 | -1.33650 | 19.48540 | 17.40020 | K562 | SYNCRIP | |
CA1 | ENSG00000133742.9 | 1048.87930 | 620.36020 | 0.75760 | 7.73250 | 5.10720 | K562 | TFIP11 | |
CA1 | ENSG00000133742.9 | 258.91760 | 371.30310 | -0.52010 | 2.76540 | 1.94800 | K562 | TIA1 | |
CA1 | ENSG00000133742.9 | 2475.42190 | 790.72760 | 1.64630 | 15.49280 | 13.15180 | K562 | TIAL1 | |
CA1 | ENSG00000133742.9 | 1691.54420 | 840.41190 | 1.00910 | 2.47960 | 1.59280 | K562 | TRIM56 | |
CA1 | ENSG00000133742.9 | 5022.42470 | 3613.09430 | 0.47500 | 4.46470 | 2.20130 | K562 | TRNAU1AP | |
CA1 | ENSG00000133742.9 | 1616.67530 | 1089.08330 | 0.56980 | 4.86270 | 2.50400 | K562 | TUFM | |
CA1 | ENSG00000133742.9 | 876.13370 | 496.00210 | 0.82070 | 5.96950 | 4.22370 | K562 | U2AF1 | |
CA1 | ENSG00000133742.9 | 1226.26600 | 512.52510 | 1.25850 | 21.70110 | 19.42320 | K562 | U2AF2 | |
CA1 | ENSG00000133742.9 | 1060.72750 | 720.22190 | 0.55840 | 4.73260 | 3.36000 | K562 | UCHL5 | |
CA1 | ENSG00000133742.9 | 1945.97000 | 1067.63400 | 0.86600 | 12.53510 | 11.14490 | K562 | UPF1 | |
CA1 | ENSG00000133742.9 | 1582.53810 | 650.46070 | 1.28260 | 3.02780 | 1.65040 | K562 | UTP18 | |
CA1 | ENSG00000133742.9 | 2518.79000 | 913.56250 | 1.46310 | 10.35990 | 8.62570 | K562 | WDR3 | |
CA1 | ENSG00000133742.9 | 2034.68530 | 949.84930 | 1.09890 | 16.14950 | 14.33910 | K562 | WDR43 | |
CA1 | ENSG00000133742.9 | 2580.17770 | 1462.59820 | 0.81880 | 16.51040 | 13.82470 | K562 | WRN | |
CA1 | ENSG00000133742.9 | 1211.69780 | 733.58370 | 0.72390 | 7.89640 | 5.55820 | K562 | XRN2 | |
CA1 | ENSG00000133742.9 | 3951.87740 | 1390.10830 | 1.50720 | 50.58230 | 47.20530 | K562 | ZC3H8 | |
CA1 | ENSG00000133742.9 | 5197.91250 | 4065.06880 | 0.35460 | 3.73850 | 1.59190 | K562 | ZNF800 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for CA1 is not available on ENCORE database.
10 RBPs can affect the splicing of CA1 :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | CA1 | ENSG00000133742.9 | chr8 | - | 86254977 | 86255054 | | | 86253827 | 86253888 | 86290274 | 86290342 | -0.05200 | 0.00005 | 0.00349 | excluded | K562 | HNRNPU | |
SE | CA1 | ENSG00000133742.9 | chr8 | - | 86253827 | 86253888 | | | 86250480 | 86250678 | 86290274 | 86290342 | 0.05800 | 0.00002 | 0.00394 | included | K562 | CPSF6 | |
SE | CA1 | ENSG00000133742.9 | chr8 | - | 86253827 | 86253888 | | | 86250480 | 86250678 | 86290274 | 86290342 | -0.17300 | 0.00266 | 0.08372 | excluded | K562 | PTBP1 | |
A3SS | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250720 | | | 86250480 | 86250678 | 86290274 | 86290342 | 0.14100 | 0.01395 | 0.07029 | longer | K562 | AQR | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250678 | 86253827 | 86253888 | 86249173 | 86249292 | 86290274 | 86290342 | -0.28100 | 0.00033 | 0.01554 | 2included | K562 | PTBP1 | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250678 | 86253827 | 86253888 | 86249173 | 86249292 | 86290274 | 86290342 | 0.11900 | 0.00358 | 0.08021 | 1included | K562 | UCHL5 | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250678 | 86253827 | 86253888 | 86249173 | 86249292 | 86290274 | 86290342 | -0.13300 | 0.00350 | 0.05355 | 2included | K562 | PUS1 | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250678 | 86253827 | 86253888 | 86249173 | 86249292 | 86290274 | 86290342 | 0.11900 | 0.00287 | 0.06900 | 1included | K562 | XRN2 | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250678 | 86253827 | 86253888 | 86249173 | 86249292 | 86290274 | 86290342 | 0.14000 | 0.00343 | 0.06796 | 1included | K562 | SBDS | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86241917 | 86242073 | 86244718 | 86244781 | 86240457 | 86240905 | 86245753 | 86245849 | -0.20000 | 0.00006 | 0.00530 | 2included | K562 | SBDS | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86250480 | 86250678 | 86253827 | 86253888 | 86249173 | 86249292 | 86290274 | 86290342 | 0.12100 | 0.00586 | 0.09103 | 1included | K562 | FXR2 | |
MXE | CA1 | ENSG00000133742.9 | chr8 | - | 86249173 | 86249292 | 86253827 | 86253888 | 86245753 | 86245849 | 86290274 | 86290342 | 0.11500 | 0.00401 | 0.06962 | 1included | K562 | SUPV3L1 | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for CA1 is not avaliable on ENCORE database.