ZNF280A

General Information

Gene Name       : ZNF280A
Gene ID             : ENSG00000169548.3
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ZNF280A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF280AENSG00000169548.30.020.020.02ENCSR000AEF
HepG2ZNF280AENSG00000169548.31.331.771.55ENCSR985KAT
K562ZNF280AENSG00000169548.324.1527.4125.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF280A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF280A RNA is bound by 9 proteins.  







eCLIP assay for ZNF280A is not avaliable on ENCORE database.





9 proteins are bound to ZNF280A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr222286985222869977-3'-UTR,CDS,intron-Distal4.257895.29377K562GRWD1
chr222287453722874585-5'-UTR,intron-Distal3.354603.43213K562UCHL5
chr222287442622874601-5'-UTR,intron-Distal3.222444.62632K562DDX3X
chr222287435822874445-5'-UTR,intron-Distal3.042183.20348K562PRPF8
chr222286836822868454-CDS,intron-Distal3.134623.69775K562YBX3
chr222286981722869919-CDS,intron-Distal3.887927.40393K562SAFB2
chr222286952422869561-CDS,intron-Distal3.062333.04831K562RBM15
chr222286894622868993-CDS,intron-Distal3.099584.74569K562RBM15
chr222286885822868894-CDS,intron-Distal4.032893.81597K562RBM15
chr222287056822870634-intron-Distal4.974575.97091K562TARDBP
chr222287066822870752-intron-Distal4.414925.08344K562TARDBP
chr222287054622870614-intron-Distal4.779765.14653K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF280A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF280A is not available on ENCORE database.

  • 109 RBPs can affect the levels of ZNF280A.  








The Knockdown/knockout RNA-Seq assay for ZNF280A is not available on ENCORE database.





109 RBPs can affect the gene expression of ZNF280A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF280AENSG00000169548.394.9718034.819501.447505.968705.14350HepG2ACO1
ZNF280AENSG00000169548.371.6269031.832101.169902.467301.96240HepG2AKAP1
ZNF280AENSG00000169548.369.4037035.001300.987502.614101.86550HepG2AKAP8L
ZNF280AENSG00000169548.341.9184083.05840-0.986502.539401.96290HepG2BOP1
ZNF280AENSG00000169548.3112.1279060.587100.888003.077002.26650HepG2CALR
ZNF280AENSG00000169548.390.1493025.021501.849106.626705.46470HepG2CIRBP
ZNF280AENSG00000169548.374.4455034.833801.095603.259502.54840HepG2CKAP4
ZNF280AENSG00000169548.384.1899029.058601.534604.366103.40170HepG2CNOT7
ZNF280AENSG00000169548.3125.7976056.455001.155803.703302.98130HepG2CELF1
ZNF280AENSG00000169548.358.5017032.213100.860702.098201.36420HepG2DDX19B
ZNF280AENSG00000169548.378.9404030.486501.372503.702202.98860HepG2DDX3X
ZNF280AENSG00000169548.3201.3673052.615401.9362011.6293010.17460HepG2DDX55
ZNF280AENSG00000169548.3148.7276044.019101.756409.157607.60870HepG2EIF3D
ZNF280AENSG00000169548.3100.1696027.094801.886306.292005.28530HepG2EIF4B
ZNF280AENSG00000169548.395.2640034.044301.484403.538302.59320HepG2EWSR1
ZNF280AENSG00000169548.3216.9877056.717601.9356011.6519010.22740HepG2FIP1L1
ZNF280AENSG00000169548.361.8748028.085101.139402.369301.72670HepG2FXR1
ZNF280AENSG00000169548.387.8227039.192101.163903.488102.46970HepG2GEMIN5
ZNF280AENSG00000169548.374.9256035.962701.058902.581001.60100HepG2GNB2L1
ZNF280AENSG00000169548.387.6074026.890201.703905.732104.11890HepG2GRSF1
ZNF280AENSG00000169548.396.9306049.936700.956802.638702.00540HepG2HNRNPA1
ZNF280AENSG00000169548.373.20550113.55080-0.633301.977401.36420HepG2HNRNPF
ZNF280AENSG00000169548.354.5199026.395901.046401.884401.30190HepG2HNRNPK
ZNF280AENSG00000169548.328.2453082.50780-1.546504.287103.51850HepG2HNRNPLL
ZNF280AENSG00000169548.385.9341039.140701.134502.874801.90580HepG2HNRNPM
ZNF280AENSG00000169548.389.4542026.466901.756906.229005.25360HepG2IGF2BP2
ZNF280AENSG00000169548.398.2233024.854101.982504.879603.58740HepG2IGF2BP3
ZNF280AENSG00000169548.379.8472035.242701.179803.142101.93220HepG2LARP7
ZNF280AENSG00000169548.356.6365028.095001.011301.915501.36420HepG2MAGOH
ZNF280AENSG00000169548.360.4802028.248701.098202.100501.54640HepG2MATR3
ZNF280AENSG00000169548.3131.9283046.067101.517804.577803.24530HepG2METAP2
ZNF280AENSG00000169548.369.1296028.911301.257602.993002.33520HepG2NCBP2
ZNF280AENSG00000169548.3121.8788048.301301.335204.354402.96400HepG2NONO
ZNF280AENSG00000169548.383.6816027.825701.588406.048805.20660HepG2PCBP1
ZNF280AENSG00000169548.3103.5810045.805601.177103.741402.33300HepG2PRPF6
ZNF280AENSG00000169548.397.9790028.318301.790607.973507.14340HepG2PTBP1
ZNF280AENSG00000169548.3115.7100060.957000.924503.162402.44530HepG2PUM2
ZNF280AENSG00000169548.371.2624035.469101.006502.756502.14140HepG2PUS1
ZNF280AENSG00000169548.3144.9025042.068601.784206.406705.35960HepG2RAVER1
ZNF280AENSG00000169548.3363.4346068.331402.4110019.6988018.57650HepG2RBM22
ZNF280AENSG00000169548.3105.3043031.511701.740507.233706.43030HepG2NELFE
ZNF280AENSG00000169548.385.7607042.836701.001402.687602.08050HepG2RPS19
ZNF280AENSG00000169548.3113.6480040.166001.500405.527004.45060HepG2RRP9
ZNF280AENSG00000169548.398.2259050.284600.965902.673002.01090HepG2SF3A3
ZNF280AENSG00000169548.366.6786029.474801.177602.952702.34590HepG2SF3B4
ZNF280AENSG00000169548.3106.1016057.309100.888503.145802.46680HepG2SMN1
ZNF280AENSG00000169548.348.2930090.87470-0.912102.014601.35230HepG2SNRNP70
ZNF280AENSG00000169548.3219.2103077.187401.5058013.0287012.15590HepG2SRFBP1
ZNF280AENSG00000169548.3107.3323030.768701.802507.783207.08310HepG2SRSF1
ZNF280AENSG00000169548.3191.5984087.858301.124705.050403.65970HepG2SRSF3
ZNF280AENSG00000169548.3150.3214056.735201.405604.866204.07390HepG2SRSF5
ZNF280AENSG00000169548.3130.7894064.527201.019204.429303.67750HepG2SUCLG1
ZNF280AENSG00000169548.324.5008053.63640-1.130402.300701.83600HepG2TIAL1
ZNF280AENSG00000169548.3332.1976048.525502.7751030.7751028.61230HepG2U2AF1
ZNF280AENSG00000169548.3130.8102057.814201.177902.320501.42650HepG2U2AF2
ZNF280AENSG00000169548.3145.4192043.054801.7559010.017608.99150HepG2UTP3
ZNF280AENSG00000169548.3116.2568046.236901.330105.140103.72110HepG2XRCC6
ZNF280AENSG00000169548.31614.025501107.064800.543805.778504.00850K562ABCF1
ZNF280AENSG00000169548.3327.09830454.05190-0.473103.682301.91770K562AKAP1
ZNF280AENSG00000169548.31100.20860769.124300.516405.179804.27320K562AKAP8L
ZNF280AENSG00000169548.32714.74620883.226001.6199030.4499028.69930K562AQR
ZNF280AENSG00000169548.3629.23540499.054600.334302.479701.57450K562BCLAF1
ZNF280AENSG00000169548.3777.50790562.791300.466202.453901.63610K562BOP1
ZNF280AENSG00000169548.31088.40180771.136100.497103.817102.08970K562BUD13
ZNF280AENSG00000169548.32195.72270815.344801.4291016.3796013.87440K562CNOT7
ZNF280AENSG00000169548.31135.68530598.399600.924304.110103.15380K562CPSF6
ZNF280AENSG00000169548.31967.549501421.495700.468906.382804.91350K562CELF1
ZNF280AENSG00000169548.31249.01580867.229400.526205.280103.21760K562DDX19B
ZNF280AENSG00000169548.3589.56000340.426400.792207.512705.38920K562DNAJC21
ZNF280AENSG00000169548.3925.33670429.938101.1057016.0873013.67400K562EFTUD2
ZNF280AENSG00000169548.3874.76550460.375100.926009.309007.26520K562EIF3D
ZNF280AENSG00000169548.3956.98610480.683300.9933015.0689013.06600K562EIF4A3
ZNF280AENSG00000169548.3896.44450588.717900.606506.869204.83360K562EXOSC5
ZNF280AENSG00000169548.3740.40110558.380000.407003.028201.35040K562FASTKD2
ZNF280AENSG00000169548.31513.05400608.874801.3131026.6725023.98500K562FMR1
ZNF280AENSG00000169548.3941.97270516.083900.868008.384106.70060K562FTO
ZNF280AENSG00000169548.3679.36470461.437000.558005.528203.56950K562FUS
ZNF280AENSG00000169548.3749.95590499.891800.585106.833905.94360K562FXR1
ZNF280AENSG00000169548.3959.82220522.375600.877608.026806.69710K562G3BP2
ZNF280AENSG00000169548.3843.44220571.317200.561905.220304.13610K562GPKOW
ZNF280AENSG00000169548.31563.106801005.176100.636908.445107.10990K562GRSF1
ZNF280AENSG00000169548.31137.26740712.274800.675002.987201.70590K562HNRNPA2B1
ZNF280AENSG00000169548.31075.21340521.642501.0434017.6029016.17890K562HNRNPC
ZNF280AENSG00000169548.3893.38970654.583900.448602.959501.99440K562HNRNPM
ZNF280AENSG00000169548.31351.566501078.943600.324902.318601.58570K562HSPD1
ZNF280AENSG00000169548.3735.52730545.890500.430102.512601.55030K562IGF2BP2
ZNF280AENSG00000169548.31250.89720744.584100.748404.426902.60390K562ILF2
ZNF280AENSG00000169548.3897.34880552.161500.700506.251203.48080K562KHSRP
ZNF280AENSG00000169548.3973.56670487.852400.996709.714507.85080K562KRR1
ZNF280AENSG00000169548.3781.57970573.840000.445603.759802.77090K562MAGOH
ZNF280AENSG00000169548.31284.24080557.672301.2033024.1569021.56780K562METAP2
ZNF280AENSG00000169548.32301.936601232.372600.9013016.4620013.95910K562MSI2
ZNF280AENSG00000169548.31066.47280742.030300.523203.668602.74750K562MTPAP
ZNF280AENSG00000169548.3952.38450640.915700.571303.786002.71230K562NAA15
ZNF280AENSG00000169548.3770.69840479.980700.683107.988605.92390K562NCBP2
ZNF280AENSG00000169548.31916.912401264.613600.600007.601705.12450K562NOL12
ZNF280AENSG00000169548.3700.16590423.527100.725106.357904.24210K562NONO
ZNF280AENSG00000169548.31432.53180824.475600.796905.049704.08320K562NSUN2
ZNF280AENSG00000169548.31375.74100783.310400.812506.026404.19290K562PABPC1
ZNF280AENSG00000169548.3970.21720510.599400.9260013.1506010.90850K562PCBP2
ZNF280AENSG00000169548.32100.86880748.846401.4881031.3109028.76320K562PCBP3
ZNF280AENSG00000169548.31602.724901187.989700.431905.118703.24850K562PNPT1
ZNF280AENSG00000169548.31617.00140574.385901.4931018.6957016.72000K562POLR2G
ZNF280AENSG00000169548.31611.94470418.378201.9458050.9937048.03270K562PRPF8
ZNF280AENSG00000169548.3852.20730557.511800.612107.071206.04590K562PTBP1
ZNF280AENSG00000169548.32334.547501261.476000.8879016.2745014.26000K562PUF60
ZNF280AENSG00000169548.32285.851001341.688700.7686016.2037013.53910K562PUM1
ZNF280AENSG00000169548.31899.807201314.680100.531009.336207.55380K562PUM2
ZNF280AENSG00000169548.31204.49310762.748100.659006.980206.16310K562PUS1
ZNF280AENSG00000169548.3809.52560534.658500.598405.806004.53120K562RBM22
ZNF280AENSG00000169548.3551.74800426.823600.370302.234401.34700K562RCC2
ZNF280AENSG00000169548.3639.45940963.25200-0.591104.938003.55090K562RPS3
ZNF280AENSG00000169548.3918.33750569.834800.688402.472801.36330K562SF1
ZNF280AENSG00000169548.31526.53170813.527200.9079022.0624019.96080K562SF3A3
ZNF280AENSG00000169548.31135.57410543.369101.0633013.5326011.30620K562SF3B1
ZNF280AENSG00000169548.3516.82280348.678900.567704.029902.48630K562SLBP
ZNF280AENSG00000169548.31569.83640654.390401.262308.201005.68360K562SNRNP200
ZNF280AENSG00000169548.3585.63660417.739400.487303.373901.53420K562SRP68
ZNF280AENSG00000169548.3794.74570538.385700.561806.444504.36670K562SSB
ZNF280AENSG00000169548.31370.47670954.995300.521003.073101.74290K562STAU1
ZNF280AENSG00000169548.3850.76490405.134601.0703012.8508010.63970K562SUPV3L1
ZNF280AENSG00000169548.3594.48450369.273200.686905.490203.18530K562TFIP11
ZNF280AENSG00000169548.3867.62260506.451200.776507.401105.45550K562U2AF1
ZNF280AENSG00000169548.31011.33750523.021300.9512017.0056014.97130K562U2AF2
ZNF280AENSG00000169548.3670.87650428.758000.645805.396903.92780K562UCHL5
ZNF280AENSG00000169548.31213.69410874.207900.473307.034505.94760K562UPF1
ZNF280AENSG00000169548.31345.12850773.359400.798404.632402.79780K562UTP18
ZNF280AENSG00000169548.31144.27710748.033800.613207.727006.22050K562WDR3
ZNF280AENSG00000169548.31423.587901046.377100.444004.600902.92740K562WRN
ZNF280AENSG00000169548.3680.90220436.552800.641205.447303.54130K562XRN2
ZNF280AENSG00000169548.31538.82260995.024200.628908.100006.50350K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF280A is not available on ENCORE database.





13 RBPs can affect the splicing of ZNF280A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.150000.000200.00564excludedK562SRSF1
SEZNF280AENSG00000169548.3chr22-2287103822871239228680592287002522874431228746130.094000.000000.00044includedK562LARP4
SEZNF280AENSG00000169548.3chr22-228710102287123922868059228700252287443122874613-0.091000.000560.09065excludedK562APOBEC3C
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.169000.001100.02439excludedK562U2AF1
SEZNF280AENSG00000169548.3chr22-2287103822871239228680592287002522874431228746130.097000.000000.00055includedK562HNRNPUL1
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.106000.000000.00008excludedK562EIF4G2
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.176000.000240.00609excludedK562U2AF2
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.144000.001750.05776excludedK562TARDBP
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.192000.000050.07298excludedK562QKI
SEZNF280AENSG00000169548.3chr22-228710382287123922868059228700252287443122874613-0.162000.000010.00107excludedK562PTBP1
SEZNF280AENSG00000169548.3chr22-2287106422871239228680592287002522874431228746130.059000.000120.03159includedK562NPM1
A3SSZNF280AENSG00000169548.3chr22-2287103822871268228710382287123922874431228746130.189000.020800.09859longerK562AQR
MXEZNF280AENSG00000169548.3chr22-2287018922870426228710382287123922868059228700252287443122874613-0.329000.011140.099272includedK562U2AF2
MXEZNF280AENSG00000169548.3chr22-2287018922870426228710382287123922868059228700252287443122874613-0.333000.003780.052562includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF280A is not avaliable on ENCORE database.