SRP72

General Information

Gene Name       : SRP72
Gene ID             : ENSG00000174780.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SRP72)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SRP72ENSG00000174780.16121.34114.36117.85ENCSR000AEF
HepG2SRP72ENSG00000174780.1672.5973.9773.28ENCSR985KAT
K562SRP72ENSG00000174780.16133.82209.06171.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SRP72A304-594A1BGHcLV41-91, Submitted, ENCORE2BGKcLV37-35, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SRP72K562CRISPRSRP72-BGKcLV37-35,SRP72-BGKcLV37-36NT-BGKcLV37-1,NT-BGKcLV37-260.9,54.1SubmittingENCORE2
SRP72HepG2CRISPRBGHcLV36-33,BGHcLV36-34BGHcLV36-1,BGHcLV36-20.0,0.0NotSatisfiedENCORE2
SRP72HepG2CRISPRSRP72-BGHcLV41-91,SRP72-BGHcLV41-92NT-BGHcLV41-1,NT-BGHcLV41-284.5,87.5SubmittingENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
SRP72Product_ID: A304-594A
Lot_ID: 1
Source: Bethyl Labs
Target Name: SRP72-human		 SRP72-HEPG2-CRISPR-A304-594A.png<br>Caption: Western blot following CRISPR against SRP72 in HepG2 whole cell lysate using SRP72 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SRP72. SRP72 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 SRP72-K562-CRISPR-A304-594A.png<br>Caption: Western blot following CRISPR against SRP72 in K562 whole cell lysate using SRP72 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SRP72. SRP72 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for SRP72 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SRP72 RNA is bound by 25 proteins.  







eCLIP assay for SRP72 is not avaliable on ENCORE database.





25 proteins are bound to SRP72 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr45736832957368380+3'-UTR4.101277.73013K562IGF2BP1
chr45736869257368755+3'-UTR3.4460017.72283K562UPF1
chr45736887557368929+3'-UTR3.651255.23915K562IGF2BP1
chr45736814757368187+3'-UTR3.189317.82552K562PABPC4
chr45734061257340655+3'-UTR,intron-Proximal4.176913.85435K562PRPF8
chr45736906757369137+3'-UTR3.367567.00311K562YBX3
chr45736829257368329+3'-UTR4.180404.24698K562IGF2BP1
chr45736827157368334+3'-UTR4.388957.36168HepG2SUB1
chr45736808157368138+3'-UTR5.1163561.88992K562PABPC4
chr45736809857368142+3'-UTR3.297733.71253K562LIN28B
chr45736804157368086+3'-UTR3.737774.43122HepG2SUB1
chr45736815457368194+3'-UTR5.368227.84269K562IGF2BP1
chr45736880457368814+3'-UTR3.505874.31744K562YBX3
chr45736901857369113+3'-UTR3.436104.06768K562NOLC1
chr45736886157368930+3'-UTR3.897645.35486K562UPF1
chr45736804657368110+3'-UTR3.261293.37451K562APOBEC3C
chr45736805157368081+3'-UTR4.2598212.35914K562PABPC4
chr45736904257369149+3'-UTR6.7656327.85165K562IGF2BP1
chr45736878757368856+3'-UTR3.538479.01626K562UPF1
chr45736903057369089+3'-UTR4.244673.65220HepG2SUB1
chr45733377157333911+5'-UTR,CDS,intron-Proximal3.4890312.35407K562DDX3X
chr45733389257333949+CDS,intron-Proximal4.367473.95187HepG2AQR
chr45736151157361567+CDS,intron-Proximal3.846025.75231K562AQR
chr45733788957337931+CDS3.5435724.82238K562YBX3
chr45733587657335900+CDS3.661859.13328K562YBX3
chr45735673557356805+CDS3.839757.81467HepG2U2AF2
chr45736152157361562+CDS,intron-Proximal4.203583.75533K562TRA2A
chr45734465557344670+CDS,intron-Distal,intron-Proximal3.922595.06180HepG2BCLAF1
chr45736672857366837+CDS3.023408.59315HepG2BCLAF1
chr45735658457356600+CDS3.605435.73361K562YBX3
chr45733590657335939+CDS4.0061826.27769K562YBX3
chr45734282457342888+CDS,intron-Proximal3.443473.39008HepG2AQR
chr45735412857354160+CDS3.145963.55800HepG2BCLAF1
chr45735090157351016+CDS,intron-Proximal3.615023.85040HepG2IGF2BP1
chr45735246657352527+CDS,intron-Proximal3.777345.09028HepG2U2AF2
chr45734049157340542+CDS3.102513.39306HepG2GRWD1
chr45734471457344763+CDS,intron-Distal,intron-Proximal3.810004.57435K562SF3B4
chr45735756257357625+CDS,intron-Proximal3.089153.80334HepG2U2AF2
chr45735102657351076+CDS,intron-Proximal4.131423.31283K562PRPF8
chr45734449657344581+CDS,intron-Distal,intron-Proximal3.502793.96535HepG2AQR
chr45734940257349436+CDS,intron-Distal3.020787.50511K562YBX3
chr45736670157366717+CDS,intron-Proximal3.703007.25346K562UCHL5
chr45735680557356892+CDS,intron-Proximal3.802158.77242HepG2U2AF2
chr45736152157361561+CDS,intron-Proximal4.5478315.56361K562UCHL5
chr45734029557340368+CDS,intron-Proximal3.562486.81103HepG2PPIG
chr45736786257367961+CDS3.5015210.27007K562UCHL5
chr45733582857335876+CDS3.163489.70805K562YBX3
chr45734453257344592+CDS,intron-Distal,intron-Proximal3.040374.43994HepG2U2AF2
chr45733390957333921+CDS,intron-Proximal4.292565.97994K562AQR
chr45734475957344809+CDS,intron-Distal4.627859.47159HepG2BCLAF1
chr45735674157356842+CDS,intron-Proximal3.837133.47425HepG2U2AF1
chr45734044357340491+CDS,intron-Proximal3.238703.79741HepG2GRWD1
chr45733788557337889+CDS,intron-Proximal3.9590722.18456K562YBX3
chr45733788857337980+CDS3.018608.85468HepG2BCLAF1
chr45734285057342871+CDS,intron-Proximal3.173926.98093K562BUD13
chr45736152357361556+CDS3.018176.80995K562ZNF622
chr45734024757340343+CDS3.753313.73851K562FXR1
chr45735673457356744+CDS3.565525.11155K562YBX3
chr45734285357342895+CDS,intron-Proximal3.619168.69914K562AQR
chr45734934257349374+CDS,intron-Distal3.161354.91034K562YBX3
chr45735770357357715+CDS3.447864.89070K562UCHL5
chr45734049657340582+CDS,intron-Proximal3.470313.98203HepG2PRPF8
chr45734055657340600+CDS,intron-Proximal4.192589.78712K562AQR
chr45735771557357734+CDS3.715898.06634K562UCHL5
chr45734931657349363+CDS,intron-Distal3.241306.19339HepG2BCLAF1
chr45735638257356454+intron-Distal,intron-Proximal3.021323.28806K562KHSRP
chr45735104657351155+intron-Distal,intron-Proximal4.984328.49499K562KHSRP
chr45734569957345714+intron-Distal3.090063.84371HepG2HNRNPC
chr45734571457345753+intron-Distal3.260924.25372HepG2HNRNPC
chr45735738657357510+intron-Distal,intron-Proximal4.770076.80456K562KHSRP
chr45735350557353594+intron-Distal4.336854.69074K562PTBP1
chr45733599157336096+intron-Distal,intron-Proximal4.040373.35169HepG2U2AF2
chr45735124757351343+intron-Distal3.512785.40624K562KHSRP
chr45734484257344952+intron-Distal,intron-Proximal3.893395.28701K562PRPF8
chr45735115557351213+intron-Distal3.723513.25538K562KHSRP
chr45735351357353603+intron-Distal4.108617.79655HepG2PTBP1
chr45735273857352820+intron-Distal4.405174.22101K562PRPF8
chr45735258957352671+intron-Distal,intron-Proximal3.488774.72639K562KHSRP
chr45734268057342779+intron-Distal,intron-Proximal4.484325.41654K562KHSRP
chr45735773757357787+intron-Proximal5.421107.28294K562AQR
chr45735660857356682+intron-Proximal3.874363.45805K562KHSRP
chr45733803257338087+intron-Proximal3.942173.12843K562PRPF8
chr45736156757361595+intron-Proximal3.331153.04871K562AQR
chr45734289557342920+intron-Proximal4.077676.32052K562AQR
chr45733392157333953+intron-Proximal5.445567.28294K562AQR
chr45735419357354217+intron-Proximal3.901583.71397K562KHSRP
chr45735421757354261+intron-Proximal4.297594.79379K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SRP72 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SRP72 is not available on ENCORE database.

  • 116 RBPs can affect the levels of SRP72.  








The Knockdown/knockout RNA-Seq assay for SRP72 is not available on ENCORE database.





116 RBPs can affect the gene expression of SRP72 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SRP72ENSG00000174780.111876.174302373.62470-0.339305.281404.25360HepG2AKAP8L
SRP72ENSG00000174780.112991.912903554.63720-0.248603.753902.97630HepG2AUH
SRP72ENSG00000174780.111417.232402186.27620-0.625405.653004.29430HepG2BCCIP
SRP72ENSG00000174780.112431.563603397.04820-0.482405.951905.11390HepG2BOP1
SRP72ENSG00000174780.113167.665504441.60050-0.487703.733302.58770HepG2CCAR1
SRP72ENSG00000174780.112039.224902361.99200-0.212002.938702.25790HepG2CKAP4
SRP72ENSG00000174780.112411.569003125.45690-0.374109.133407.91010HepG2DAZAP1
SRP72ENSG00000174780.11914.044002121.40280-1.2147023.8563022.14330HepG2DDX21
SRP72ENSG00000174780.112489.007003812.83660-0.615307.261106.29280HepG2DDX3X
SRP72ENSG00000174780.111587.150401997.07560-0.331503.125801.68840HepG2DDX52
SRP72ENSG00000174780.111798.717303275.41730-0.8647011.5207010.36420HepG2DDX6
SRP72ENSG00000174780.111808.837802260.35620-0.321504.689403.84970HepG2DKC1
SRP72ENSG00000174780.111437.282502023.80060-0.493708.423107.24870HepG2DNAJC21
SRP72ENSG00000174780.111294.065602006.03350-0.6324018.7413017.19020HepG2DNAJC2
SRP72ENSG00000174780.111894.231702382.85950-0.331102.481601.60540HepG2EEF2
SRP72ENSG00000174780.111979.098803148.62720-0.669908.347707.35620HepG2EIF2S1
SRP72ENSG00000174780.111539.214901934.40960-0.329702.137101.33400HepG2EIF3D
SRP72ENSG00000174780.111831.977003479.54950-0.9255013.0528011.68930HepG2EIF4A3
SRP72ENSG00000174780.111943.756703387.93220-0.801608.032006.89060HepG2EIF4B
SRP72ENSG00000174780.113548.355303083.342600.202602.378001.59250HepG2EIF4G1
SRP72ENSG00000174780.113058.963304081.28350-0.416009.099508.11450HepG2ETF1
SRP72ENSG00000174780.111305.399201728.76550-0.405304.686203.12770HepG2FAM120A
SRP72ENSG00000174780.112588.392603419.65100-0.401803.085902.27750HepG2FIP1L1
SRP72ENSG00000174780.112554.985903510.88200-0.458504.482703.61640HepG2FXR1
SRP72ENSG00000174780.111695.664403256.77240-0.9416014.4044012.94260HepG2G3BP1
SRP72ENSG00000174780.112754.593403457.59300-0.327902.592801.73310HepG2G3BP2
SRP72ENSG00000174780.111430.988902067.56680-0.530904.779703.43950HepG2GNB2L1
SRP72ENSG00000174780.112633.672603535.20100-0.424703.603602.88190HepG2GPKOW
SRP72ENSG00000174780.111941.026002255.55570-0.216702.496601.56410HepG2HDGF
SRP72ENSG00000174780.111262.294302043.19030-0.6948010.998009.84020HepG2HNRNPA1
SRP72ENSG00000174780.111384.627002272.70590-0.7149011.244909.92590HepG2HNRNPC
SRP72ENSG00000174780.112482.908703009.36300-0.277404.009003.16190HepG2HNRNPF
SRP72ENSG00000174780.112153.059003297.97650-0.615208.537307.36260HepG2HNRNPK
SRP72ENSG00000174780.112408.506602847.09170-0.241404.310303.48260HepG2HNRNPL
SRP72ENSG00000174780.112146.807803373.71130-0.652108.800807.74730HepG2HNRNPLL
SRP72ENSG00000174780.111688.173402257.67760-0.419408.017707.02650HepG2HNRNPU
SRP72ENSG00000174780.112425.618902963.36420-0.288903.089802.32750HepG2IGF2BP1
SRP72ENSG00000174780.112147.359103310.40760-0.624407.597106.53540HepG2IGF2BP2
SRP72ENSG00000174780.111933.430302306.13700-0.254304.322503.42650HepG2ILF2
SRP72ENSG00000174780.111872.375002159.65920-0.205902.732401.71840HepG2KIF1C
SRP72ENSG00000174780.113243.872404688.56720-0.531404.528903.45520HepG2LARP4
SRP72ENSG00000174780.112271.780803512.10840-0.628507.445806.38370HepG2MAGOH
SRP72ENSG00000174780.112825.524103531.73890-0.321902.149901.58960HepG2MATR3
SRP72ENSG00000174780.111826.195702767.75750-0.599909.459808.04730HepG2MSI2
SRP72ENSG00000174780.112570.562703440.84060-0.420702.549901.62300HepG2MTPAP
SRP72ENSG00000174780.112148.709103614.90960-0.750509.873508.72030HepG2NCBP2
SRP72ENSG00000174780.112183.016803099.18970-0.505609.118507.76260HepG2NOL12
SRP72ENSG00000174780.112246.836303219.21410-0.518805.203204.22520HepG2PABPC4
SRP72ENSG00000174780.112439.024803306.13540-0.438809.678908.65480HepG2PCBP1
SRP72ENSG00000174780.111308.408601599.69800-0.290002.669901.46240HepG2PKM
SRP72ENSG00000174780.111163.542501658.38960-0.511304.355103.36570HepG2PRPF8
SRP72ENSG00000174780.112260.308603364.10830-0.5737015.0326013.95490HepG2PTBP1
SRP72ENSG00000174780.111969.329102958.41150-0.587109.142508.14350HepG2PUF60
SRP72ENSG00000174780.112761.258003140.44180-0.185602.868602.26740HepG2PUM1
SRP72ENSG00000174780.111565.874902406.46340-0.6199017.7544016.43680HepG2PUS1
SRP72ENSG00000174780.112345.461003643.42970-0.6354014.4655013.19490HepG2QKI
SRP72ENSG00000174780.113502.230702486.744400.493902.575901.89490HepG2RAVER1
SRP72ENSG00000174780.112535.159803411.18020-0.428207.678806.91540HepG2RBM22
SRP72ENSG00000174780.112177.557703306.64010-0.6027010.324209.08180HepG2RBM25
SRP72ENSG00000174780.112163.555803743.93630-0.7912028.3963027.03670HepG2NELFE
SRP72ENSG00000174780.112604.924903486.95550-0.420709.148108.12650HepG2RECQL
SRP72ENSG00000174780.112655.329403241.81050-0.287902.628201.95950HepG2RPLP0
SRP72ENSG00000174780.111330.715701882.21580-0.500206.234605.35340HepG2RPS19
SRP72ENSG00000174780.111665.380602252.48200-0.435703.950303.00220HepG2RPS2
SRP72ENSG00000174780.111469.892001896.83370-0.367902.046101.35820HepG2RPS3A
SRP72ENSG00000174780.111709.015102299.22750-0.428003.711402.45710HepG2RPS5
SRP72ENSG00000174780.112725.734902010.541400.4390010.461609.33300HepG2SAFB2
SRP72ENSG00000174780.111394.436603339.28310-1.2599032.7711030.66730HepG2SF3B1
SRP72ENSG00000174780.112270.968903502.48560-0.6251018.5932017.27360HepG2SF3B4
SRP72ENSG00000174780.111976.808402344.59680-0.246203.933203.18890HepG2SMN1
SRP72ENSG00000174780.112929.326303852.77140-0.395309.461508.68610HepG2SRFBP1
SRP72ENSG00000174780.112395.817702920.94930-0.285904.387403.63220HepG2SRSF5
SRP72ENSG00000174780.112265.615902956.59720-0.384007.105206.07240HepG2SRSF7
SRP72ENSG00000174780.112262.787002974.20780-0.394408.360107.49320HepG2SRSF9
SRP72ENSG00000174780.112727.091103345.06350-0.294705.151704.49450HepG2SSB
SRP72ENSG00000174780.112633.296103321.96780-0.335207.364106.43090HepG2SUCLG1
SRP72ENSG00000174780.111534.531302139.87960-0.479703.719702.95170HepG2SUPV3L1
SRP72ENSG00000174780.112403.172203288.43740-0.452505.118904.17750HepG2TARDBP
SRP72ENSG00000174780.111756.903602711.44170-0.626002.693601.63920HepG2TBRG4
SRP72ENSG00000174780.112450.979403019.39160-0.300903.133102.24790HepG2TIA1
SRP72ENSG00000174780.111214.497102193.62630-0.8530019.6300018.51930HepG2TIAL1
SRP72ENSG00000174780.111706.473702213.37450-0.375206.507605.70820HepG2TRIM56
SRP72ENSG00000174780.112291.834902890.17310-0.334703.654502.63440HepG2TUFM
SRP72ENSG00000174780.11778.049901264.13300-0.700207.509606.25540HepG2UCHL5
SRP72ENSG00000174780.112335.466602993.94080-0.358307.017305.98910HepG2UPF1
SRP72ENSG00000174780.111337.989601959.63000-0.550503.497402.36130HepG2UPF2
SRP72ENSG00000174780.111370.061902106.47500-0.620606.579305.47750HepG2XRN2
SRP72ENSG00000174780.112329.080002778.02160-0.254304.231103.42800HepG2ZC3H8
SRP72ENSG00000174780.112944.685203292.75990-0.161202.268401.75850HepG2ZNF622
SRP72ENSG00000174780.115638.977608751.91340-0.6342010.782109.73610K562AQR
SRP72ENSG00000174780.114564.472005346.88090-0.228203.013101.63490K562BCCIP
SRP72ENSG00000174780.114074.205905167.03280-0.342807.459505.85950K562BCLAF1
SRP72ENSG00000174780.116161.317907898.16720-0.358303.074701.56000K562BUD13
SRP72ENSG00000174780.117556.9130010829.78330-0.519103.054701.93020K562CNOT7
SRP72ENSG00000174780.118934.6896010663.52500-0.255203.876702.55940K562CPEB4
SRP72ENSG00000174780.116362.891807808.93850-0.295403.465402.58540K562CPSF6
SRP72ENSG00000174780.113157.336803919.96440-0.312104.456703.07560K562CSTF2
SRP72ENSG00000174780.115609.688506654.48450-0.246403.528802.15750K562DDX21
SRP72ENSG00000174780.1111953.1589010497.430500.187302.293701.50660K562DKC1
SRP72ENSG00000174780.115482.697706702.70540-0.289904.578003.68120K562EIF2S2
SRP72ENSG00000174780.114758.706003008.282900.661504.669303.33050K562EIF3A
SRP72ENSG00000174780.115765.273404896.252200.235602.735201.94290K562EIF3G
SRP72ENSG00000174780.113851.952505332.90150-0.469306.171604.95500K562EIF4A3
SRP72ENSG00000174780.1110007.6733011782.30590-0.235503.295302.27280K562EIF4G2
SRP72ENSG00000174780.116714.307108150.76740-0.279702.593001.77290K562FIP1L1
SRP72ENSG00000174780.115466.023007945.25820-0.539607.555006.10300K562FMR1
SRP72ENSG00000174780.114988.439906734.25730-0.432904.317103.15170K562FTO
SRP72ENSG00000174780.118135.143705953.389800.450403.328202.53930K562G3BP2
SRP72ENSG00000174780.115852.246507455.67710-0.349304.035003.08060K562GPKOW
SRP72ENSG00000174780.115679.212408932.18780-0.6533013.8171012.10810K562GRSF1
SRP72ENSG00000174780.115294.353206746.93600-0.349804.469403.10910K562HNRNPA1
SRP72ENSG00000174780.113347.328305859.51960-0.8078012.5712011.37340K562HNRNPC
SRP72ENSG00000174780.113964.834205231.84790-0.400104.068502.65310K562HNRNPF
SRP72ENSG00000174780.117472.642609971.86450-0.416205.916904.31030K562HNRNPL
SRP72ENSG00000174780.115298.490207393.75590-0.480707.135805.75760K562MAGOH
SRP72ENSG00000174780.115248.540407277.54640-0.471507.052505.62220K562METAP2
SRP72ENSG00000174780.116043.078907669.03110-0.343808.572307.22330K562MTPAP
SRP72ENSG00000174780.117117.521208521.16800-0.259708.598207.38580K562NSUN2
SRP72ENSG00000174780.115703.009207375.12210-0.370903.234702.33540K562PCBP3
SRP72ENSG00000174780.114276.154105656.99540-0.403706.019704.84180K562POLR2G
SRP72ENSG00000174780.113958.668805253.47550-0.408304.393003.21340K562PSIP1
SRP72ENSG00000174780.116181.391707183.47080-0.216702.008601.42600K562PTBP1
SRP72ENSG00000174780.1110540.0076013397.70850-0.346106.521705.03090K562PUM2
SRP72ENSG00000174780.1111488.908909674.648400.247902.237401.73840K562PUS1
SRP72ENSG00000174780.114879.775106888.28150-0.497306.684605.30940K562RBM22
SRP72ENSG00000174780.114002.893904792.16320-0.259602.646301.67770K562RCC2
SRP72ENSG00000174780.115052.312907248.76980-0.520806.452604.70190K562NELFE
SRP72ENSG00000174780.115687.495104426.105300.361703.057202.19790K562RPS19
SRP72ENSG00000174780.116175.423708407.94190-0.4452010.423808.91560K562SF3A3
SRP72ENSG00000174780.113200.027907090.38570-1.1478022.9881020.16560K562SF3B1
SRP72ENSG00000174780.114183.742706191.80830-0.5656011.494509.67780K562SF3B4
SRP72ENSG00000174780.117217.614908614.09310-0.255206.193304.85990K562SRPK2
SRP72ENSG00000174780.115112.786006052.15390-0.243302.372901.40840K562SRSF4
SRP72ENSG00000174780.112777.441104207.51380-0.599206.083604.53260K562SUPV3L1
SRP72ENSG00000174780.116914.506305674.078900.285103.535502.60690K562SYNCRIP
SRP72ENSG00000174780.114613.615707127.20700-0.627409.220407.82570K562TARDBP
SRP72ENSG00000174780.115334.156006874.97380-0.366105.020803.86670K562TIA1
SRP72ENSG00000174780.113899.053205053.08030-0.374003.219602.20370K562TIAL1
SRP72ENSG00000174780.117167.441405961.004200.265803.101202.25060K562U2AF2
SRP72ENSG00000174780.117705.985109035.16040-0.229604.387903.50360K562UPF1
SRP72ENSG00000174780.115990.072407731.12540-0.368104.883903.70450K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SRP72 is not available on ENCORE database.





5 RBPs can affect the splicing of SRP72 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESRP72ENSG00000174780.11chr4+573428365734286857340445573405575734454457344669-0.104000.000000.00000excludedK562SF3B4
SESRP72ENSG00000174780.11chr4+573428365734286857340416573405575734454457344669-0.092000.000000.00000excludedK562AQR
SESRP72ENSG00000174780.11chr4+573428365734286857340445573405575734454457344669-0.089000.000000.00010excludedK562SF3B1
MXESRP72ENSG00000174780.11chr4+5734283657342868573493045734943657340445573405575735090157351030-0.076000.008740.092142includedK562U2AF1
MXESRP72ENSG00000174780.11chr4+57344544573446695735090157351030573404455734055757352490573525630.088000.000000.000001includedK562AQR
MXESRP72ENSG00000174780.11chr4+57342836573428685734930457349436573404455734055757350901573510300.092000.000110.005651includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SRP72 is not avaliable on ENCORE database.