RFNG

General Information

Gene Name       : RFNG
Gene ID             : ENSG00000169733.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RFNG)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RFNGENSG00000169733.110.844.932.88ENCSR000AEF
HepG2RFNGENSG00000169733.1164.0915.4839.79ENCSR985KAT
K562RFNGENSG00000169733.1113.376.089.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RFNG is not avaliable on ENCORE database.



Proteins bound to RNA
  • RFNG RNA is bound by 26 proteins.  







eCLIP assay for RFNG is not avaliable on ENCORE database.





26 proteins are bound to RFNG RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr178000609280006192-3'-UTR,intron-Distal5.4109132.84818HepG2UPF1
chr178000603480006092-3'-UTR,intron-Distal5.577829.75816HepG2UPF1
chr178000621080006285-3'-UTR,intron-Distal,intron-Proximal4.1835215.17402HepG2LSM11
chr178000579880005890-3'-UTR,intron-Distal4.8740414.47702K562UPF1
chr178000620080006284-3'-UTR,intron-Distal,intron-Proximal5.2787120.09140HepG2UPF1
chr178000633580006440-3'-UTR,intron-Distal,intron-Proximal3.9471118.91718HepG2AKAP1
chr178000629980006415-3'-UTR,intron-Distal,intron-Proximal6.1249936.99160HepG2UPF1
chr178000652380006563-3'-UTR,intron-Distal,intron-Proximal3.305587.13222HepG2UPF1
chr178000610480006184-3'-UTR,intron-Distal5.2408019.60964HepG2AKAP1
chr178000589080006021-3'-UTR,intron-Distal4.5891018.35369K562UPF1
chr178000580680005866-3'-UTR,intron-Distal5.9846216.74558HepG2AKAP1
chr178000856080008630-3'-UTR,5'-UTR,CDS,intron-Distal3.237434.79623HepG2UCHL5
chr178000581780005864-3'-UTR,intron-Distal4.5645011.60568HepG2UPF1
chr178000641580006511-3'-UTR,intron-Distal,intron-Proximal4.7326319.62181HepG2UPF1
chr178000592280006010-3'-UTR,intron-Distal5.2086616.34865HepG2AKAP1
chr178000603380006105-3'-UTR,intron-Distal3.9673810.80611HepG2LSM11
chr178000602180006329-3'-UTR,intron-Distal,intron-Proximal4.2213524.04690K562UPF1
chr178000620480006292-3'-UTR,intron-Distal,intron-Proximal3.316716.96309HepG2ZC3H11A
chr178000619080006263-3'-UTR,intron-Distal,intron-Proximal4.1849512.62672HepG2AKAP1
chr178000857680008661-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1689010.11979HepG2AQR
chr178000593080005988-3'-UTR,intron-Distal5.7694015.41547HepG2UPF1
chr178000635680006416-3'-UTR,intron-Distal,intron-Proximal4.3505015.51437HepG2LSM11
chr178000602980006096-3'-UTR,intron-Distal5.1537918.84814HepG2AKAP1
chr178000854580008610-3'-UTR,5'-UTR,CDS,intron-Distal3.2523014.39484HepG2PPIG
chr178000622780006275-3'-UTR,intron-Distal,intron-Proximal3.966325.19325HepG2LARP4
chr178000586480005920-3'-UTR,intron-Distal5.8154915.92060HepG2UPF1
chr178000634780006386-3'-UTR,intron-Distal,intron-Proximal3.434184.96603K562UPF1
chr178000651380006554-3'-UTR,intron-Distal,intron-Proximal3.629927.68538HepG2AKAP1
chr178000628580006348-3'-UTR,intron-Distal,intron-Proximal3.555699.18020HepG2LSM11
chr178000860080008707-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0347316.74304HepG2PRPF8
chr178000643780006491-3'-UTR,intron-Distal3.259093.71240HepG2PABPN1
chr178000942080009450-5'-UTR,CDS,intron-Distal,intron-Proximal4.168133.38114HepG2GRWD1
chr178000941080009459-5'-UTR,CDS,intron-Distal,intron-Proximal4.078059.58474HepG2PPIG
chr178000909380009175-5'-UTR,CDS,intron-Distal,intron-Proximal3.0804813.09926HepG2PRPF8
chr178000925880009281-5'-UTR,intron-Distal,intron-Proximal3.948273.31322HepG2SF3B4
chr178000902880009103-5'-UTR,intron-Distal,intron-Proximal3.257957.69141K562RBM15
chr178000915080009171-5'-UTR,CDS,intron-Distal,intron-Proximal5.561999.96618HepG2AQR
chr178000963380009684-5'-UTR,CDS,intron-Distal,intron-Proximal5.4397835.13701HepG2DDX3X
chr178000912880009150-5'-UTR,intron-Distal,intron-Proximal5.518058.88638HepG2AQR
chr178000963380009679-5'-UTR,CDS,intron-Distal,intron-Proximal3.226305.22257HepG2UPF1
chr178000899380009065-5'-UTR,intron-Distal3.1841412.85279HepG2EFTUD2
chr178000779080007829-CDS,intron-Distal,intron-Proximal4.1188717.90528HepG2PPIG
chr178000773580007809-CDS,intron-Distal,intron-Proximal3.6936924.30239HepG2PRPF8
chr178000761180007667-CDS,intron-Distal,intron-Proximal4.3359311.83519HepG2PPIG
chr178000952480009561-CDS,intron-Distal,intron-Proximal3.216465.90734HepG2DDX3X
chr178000782980007855-CDS,intron-Distal3.196228.33070HepG2PPIG
chr178000833580008400-CDS,intron-Distal,intron-Proximal3.351605.40646K562RBM15
chr178000956180009633-CDS,intron-Distal,intron-Proximal5.0272366.11318HepG2DDX3X
chr178000840680008431-CDS,intron-Distal,intron-Proximal3.043145.24980HepG2GRWD1
chr178000661980006654-CDS,intron-Distal,intron-Proximal3.052324.25624HepG2AKAP1
chr178000770180007738-CDS,intron-Distal,intron-Proximal3.371785.86490HepG2SF3B4
chr178000662280006664-CDS,intron-Distal,intron-Proximal3.397863.77473HepG2PABPN1
chr178000755580007608-CDS,intron-Distal,intron-Proximal3.734846.02098HepG2PRPF4
chr178000774180007805-CDS,intron-Distal,intron-Proximal3.8941123.53564HepG2EFTUD2
chr178000853780008545-CDS,intron-Distal,intron-Proximal3.375277.38586HepG2PPIG
chr178000829080008354-CDS,intron-Distal,intron-Proximal3.7799512.29574HepG2PPIG
chr178000774180007801-CDS,intron-Distal,intron-Proximal3.080933.90490HepG2SRSF1
chr178000777480007836-CDS,intron-Distal,intron-Proximal3.808286.96023HepG2RBM15
chr178000776280007806-CDS,intron-Distal,intron-Proximal3.172046.70485HepG2GRWD1
chr178000696080006992-CDS,intron-Distal4.8736420.42599HepG2PPIG
chr178000841280008431-CDS,intron-Distal,intron-Proximal3.360955.54641HepG2PPIG
chr178000778080007805-CDS,intron-Distal,intron-Proximal3.967593.05875K562RBM15
chr178000946280009512-CDS,intron-Distal,intron-Proximal3.574884.54434HepG2UPF1
chr178000755280007611-CDS,intron-Distal,intron-Proximal4.4471324.21983HepG2PPIG
chr178000690780006960-CDS,intron-Distal4.6806922.89133HepG2PPIG
chr178000787680007948-CDS,intron-Distal,intron-Proximal3.704199.48308HepG2SF3B4
chr178000781280007860-CDS,intron-Distal,intron-Proximal4.097536.28172K562RBM15
chr178000773880007801-CDS,intron-Distal,intron-Proximal3.714837.24193HepG2SF3B4
chr178000787180007938-CDS,intron-Distal,intron-Proximal4.8885424.23298HepG2SF3A3
chr178000771880007785-intron-Distal,intron-Proximal4.7817111.80638HepG2BUD13
chr178000745280007497-intron-Distal,intron-Proximal3.825506.64595HepG2RBFOX2
chr178000803580008095-intron-Distal3.262885.96307K562BUD13
chr178000800180008109-intron-Distal3.508534.13258K562RBFOX2
chr178000820380008239-intron-Distal,intron-Proximal3.513428.74772HepG2PPIG
chr178000738580007443-intron-Distal7.4029543.45491HepG2RBFOX2
chr178000809980008135-intron-Distal4.048897.22341K562RBM15
chr178000798980008126-intron-Distal4.3328020.69440HepG2PRPF4
chr178000812680008211-intron-Distal,intron-Proximal3.073876.34084HepG2PRPF4
chr178000774080007794-intron-Distal,intron-Proximal5.984798.62858HepG2RBM5
chr178000750680007530-intron-Distal,intron-Proximal3.700818.77679HepG2PRPF8
chr178000674880006833-intron-Distal,intron-Proximal3.470094.59716HepG2HNRNPK
chr178000802280008096-intron-Distal4.9434712.38769K562RBM15
chr178000819580008234-intron-Distal,intron-Proximal4.352594.70436K562RBM15
chr178000746480007512-intron-Distal,intron-Proximal4.346937.47792HepG2RBM22
chr178000731380007367-intron-Distal4.2433112.35230HepG2RBFOX2
chr178000801380008077-intron-Distal4.2730617.34528HepG2SF3A3
chr178000797380008022-intron-Distal,intron-Proximal5.113218.27082K562RBM15
chr178000751280007540-intron-Distal,intron-Proximal4.548753.59236HepG2AQR
chr178000866180008713-intron-Distal,intron-Proximal4.609578.99007HepG2AQR
chr178000774280007790-intron-Distal,intron-Proximal4.7786321.90392HepG2PPIG
chr178000801780008140-intron-Distal4.3606742.67295HepG2RBFOX2
chr178000799080008083-intron-Distal3.361536.89918K562PRPF8
chr178000813180008185-intron-Distal,intron-Proximal4.966298.64103HepG2GRWD1
chr178000877280008851-intron-Distal,intron-Proximal5.294678.53052K562RBM15
chr178000798880008076-intron-Distal3.6608629.66103HepG2EFTUD2
chr178000800180008093-intron-Distal3.739294.50798HepG2WDR43
chr178000803680008089-intron-Distal3.659084.45974HepG2GTF2F1
chr178000874680008805-intron-Distal,intron-Proximal3.095603.49558HepG2UCHL5
chr178000774780007792-intron-Distal,intron-Proximal3.334663.18246K562PRPF8
chr178000814080008205-intron-Distal,intron-Proximal3.8146413.47423HepG2RBFOX2
chr178000800480008079-intron-Distal3.398895.40597HepG2XPO5
chr178000684880006888-intron-Distal,intron-Proximal3.770933.82719HepG2RBM22
chr178000813580008195-intron-Distal,intron-Proximal4.6470510.06857K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RFNG is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RFNG is not available on ENCORE database.

  • 117 RBPs can affect the levels of RFNG.  








The Knockdown/knockout RNA-Seq assay for RFNG is not available on ENCORE database.





117 RBPs can affect the gene expression of RFNG :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RFNGENSG00000169733.72468.719501654.794900.577005.553604.26800HepG2ABCF1
RFNGENSG00000169733.7877.694901579.25080-0.8474024.8046023.39760HepG2ACO1
RFNGENSG00000169733.7624.10180478.063100.384502.295101.38510HepG2ADAR
RFNGENSG00000169733.71469.69310705.340801.059005.250603.95270HepG2BCCIP
RFNGENSG00000169733.71196.38670615.811000.958007.328206.40980HepG2BOP1
RFNGENSG00000169733.7525.71810787.73120-0.583402.973902.17620HepG2CALR
RFNGENSG00000169733.71522.907801055.618400.528602.163901.31020HepG2CCAR1
RFNGENSG00000169733.72007.801201578.834000.346706.256905.32950HepG2CKAP4
RFNGENSG00000169733.7703.37320490.250600.520705.386903.96500HepG2YBX3
RFNGENSG00000169733.7678.37700435.471900.639402.843201.75440HepG2CSTF2
RFNGENSG00000169733.71201.26980911.725100.397805.697104.68800HepG2DAZAP1
RFNGENSG00000169733.71085.86060693.573700.646602.675901.91260HepG2DDX55
RFNGENSG00000169733.72029.489001510.896100.425607.236806.23830HepG2DKC1
RFNGENSG00000169733.7873.49650481.381200.859508.670007.48080HepG2DNAJC21
RFNGENSG00000169733.7922.56400477.142300.9511023.1370021.41810HepG2DNAJC2
RFNGENSG00000169733.71466.31520861.615200.7670010.294708.77290HepG2EIF4G2
RFNGENSG00000169733.71012.376601543.14490-0.608106.083804.84350HepG2EWSR1
RFNGENSG00000169733.71091.836801670.82450-0.613803.219702.39560HepG2FIP1L1
RFNGENSG00000169733.71031.94000640.691700.687602.996002.33340HepG2GPKOW
RFNGENSG00000169733.71246.59450640.143200.961404.664402.84610HepG2HNRNPA0
RFNGENSG00000169733.7885.66450485.993000.865703.346202.64370HepG2HNRNPA1
RFNGENSG00000169733.71584.87950973.439100.7031014.0645012.61290HepG2HNRNPF
RFNGENSG00000169733.71318.84240830.521800.6671015.1674013.70210HepG2HNRNPL
RFNGENSG00000169733.7929.06540537.007100.7907014.9755013.65640HepG2HNRNPU
RFNGENSG00000169733.71616.32740958.563000.7537013.7713012.28440HepG2IGF2BP1
RFNGENSG00000169733.7809.15150548.534300.560708.475107.26070HepG2ILF2
RFNGENSG00000169733.71402.35170721.184300.959303.683102.27580HepG2KHDRBS1
RFNGENSG00000169733.72086.075201115.805400.902606.529505.24250HepG2LARP4
RFNGENSG00000169733.7881.11150546.184600.689802.835701.60690HepG2LIN28B
RFNGENSG00000169733.71048.110001351.72200-0.367002.818302.00210HepG2MSI2
RFNGENSG00000169733.7773.03020470.646500.715802.780201.35880HepG2NIP7
RFNGENSG00000169733.7811.61300457.737400.826205.896303.83640HepG2NOLC1
RFNGENSG00000169733.71251.79700637.270100.973905.590004.00500HepG2NONO
RFNGENSG00000169733.7793.84000542.243600.549801.962501.32750HepG2NSUN2
RFNGENSG00000169733.71251.46320690.938600.856903.669202.63570HepG2PABPC1
RFNGENSG00000169733.71150.05190478.966701.2636033.5982031.29480HepG2PPIL4
RFNGENSG00000169733.71756.15800862.998001.0249020.8714019.43710HepG2PUF60
RFNGENSG00000169733.71514.17340916.099700.7249019.9206018.62380HepG2PUM1
RFNGENSG00000169733.71169.09410915.437300.352802.564801.91880HepG2PUM2
RFNGENSG00000169733.71525.092901927.92930-0.338201.741701.30640HepG2RBM22
RFNGENSG00000169733.71156.15790627.796700.880904.368303.10210HepG2RBM27
RFNGENSG00000169733.71041.64990509.803801.030805.921904.36610HepG2RCC2
RFNGENSG00000169733.71498.476801048.581700.515002.536301.87790HepG2RPLP0
RFNGENSG00000169733.7954.73060563.090600.761602.161301.32430HepG2RPS10
RFNGENSG00000169733.71343.68010751.057700.839105.086004.28140HepG2RPS19
RFNGENSG00000169733.71657.85230578.902201.5178023.7486021.61640HepG2RPS2
RFNGENSG00000169733.71660.05480759.884701.127306.986105.72750HepG2RPS3A
RFNGENSG00000169733.71181.42190478.226201.3047037.8359035.88110HepG2SAFB2
RFNGENSG00000169733.71237.33340715.529300.790102.804101.48420HepG2SART3
RFNGENSG00000169733.71715.15230827.458501.0515039.7770037.77990HepG2SLBP
RFNGENSG00000169733.7856.92630557.688700.6196010.193209.08390HepG2SMN1
RFNGENSG00000169733.71096.25590585.806100.904004.318803.10400HepG2SMNDC1
RFNGENSG00000169733.71004.63200559.068200.845503.114601.42400HepG2SND1
RFNGENSG00000169733.71082.358702177.42810-1.008409.372208.59990HepG2SRFBP1
RFNGENSG00000169733.7809.731701549.26800-0.9361010.9853010.17890HepG2SRSF1
RFNGENSG00000169733.71411.06370852.071900.7276015.8127014.48800HepG2SRSF5
RFNGENSG00000169733.71283.93160956.360100.424806.224905.24780HepG2SRSF7
RFNGENSG00000169733.7621.109701260.49060-1.0211012.0878011.07800HepG2SRSF9
RFNGENSG00000169733.73530.661001890.353400.9012025.3157024.11350HepG2SSB
RFNGENSG00000169733.71137.26460661.440900.781802.842501.72450HepG2STIP1
RFNGENSG00000169733.71668.35780969.051600.7837018.8609017.47070HepG2SUCLG1
RFNGENSG00000169733.7997.28530690.321600.530602.033301.44070HepG2SUPV3L1
RFNGENSG00000169733.7691.701201392.79560-1.009807.615806.76130HepG2TAF15
RFNGENSG00000169733.7911.42270596.286800.612002.228701.56810HepG2TARDBP
RFNGENSG00000169733.72453.79010521.787902.2334055.2286053.53290HepG2TIAL1
RFNGENSG00000169733.71267.11540526.468201.2670040.6750038.83390HepG2TRIM56
RFNGENSG00000169733.71733.41750843.094901.039805.447604.17190HepG2TUFM
RFNGENSG00000169733.7771.089801428.97760-0.890007.863406.80860HepG2U2AF1
RFNGENSG00000169733.71477.04830892.391100.726902.038101.32550HepG2UBE2L3
RFNGENSG00000169733.7841.62420407.711901.0455012.0041010.43880HepG2UCHL5
RFNGENSG00000169733.7831.787801354.64150-0.7036014.4082013.20260HepG2UTP3
RFNGENSG00000169733.71360.79510680.699600.999304.374602.98530HepG2XPO5
RFNGENSG00000169733.71809.95100679.549501.4132019.2390017.39910HepG2XRN2
RFNGENSG00000169733.71230.96940991.263400.312403.884303.11120HepG2ZC3H8
RFNGENSG00000169733.71261.398101543.14550-0.290904.199603.56410HepG2ZNF622
RFNGENSG00000169733.71068.45770572.681000.899604.318202.66850HepG2ZRANB2
RFNGENSG00000169733.71555.63280791.648100.9745023.6003022.05620K562AGGF1
RFNGENSG00000169733.7608.01960463.955300.390003.346001.66130K562AKAP1
RFNGENSG00000169733.71353.77570869.986800.637808.561106.57460K562AKAP8
RFNGENSG00000169733.71456.15580823.766700.821804.676903.82050K562AKAP8L
RFNGENSG00000169733.71224.11480864.369100.501904.038302.91630K562ATP5C1
RFNGENSG00000169733.7465.56090282.623100.720007.072605.50740K562BCLAF1
RFNGENSG00000169733.7329.83610205.890800.679803.093001.72990K562CIRBP
RFNGENSG00000169733.7403.40340214.411700.911708.307006.35220K562CSTF2
RFNGENSG00000169733.7828.04100596.379500.473404.191002.67960K562DDX21
RFNGENSG00000169733.7336.23520247.824200.440102.757101.44020K562DDX27
RFNGENSG00000169733.7734.06600470.125800.642806.995805.23900K562DDX3X
RFNGENSG00000169733.7952.89670660.210700.529307.080706.10530K562DDX47
RFNGENSG00000169733.7454.27920237.219500.937306.069004.67220K562EFTUD2
RFNGENSG00000169733.7595.07600375.169000.665402.655501.67520K562EIF3A
RFNGENSG00000169733.7416.20930253.837000.713302.933701.86590K562EIF3D
RFNGENSG00000169733.7264.61610132.822200.994307.633906.31830K562EIF3G
RFNGENSG00000169733.7560.51870428.753700.386502.930401.59350K562EWSR1
RFNGENSG00000169733.7414.96920299.597300.469902.505401.69930K562FIP1L1
RFNGENSG00000169733.7341.46780510.80450-0.581002.733502.13170K562FXR1
RFNGENSG00000169733.723.81870102.46500-2.105006.394905.22050K562G3BP2
RFNGENSG00000169733.7751.89570478.771600.651102.624601.44820K562HNRNPA2B1
RFNGENSG00000169733.7508.26130192.312801.402004.227002.84390K562IGF2BP2
RFNGENSG00000169733.7328.28810195.522400.747504.777303.12380K562IGF2BP3
RFNGENSG00000169733.71196.74340874.148900.453104.652303.53440K562KIF1C
RFNGENSG00000169733.7519.49760322.291900.688602.965901.37150K562LSM11
RFNGENSG00000169733.7325.29110201.901100.688004.741103.63450K562MAGOH
RFNGENSG00000169733.71090.42590836.835100.381802.299901.34950K562MAK16
RFNGENSG00000169733.7307.24960201.459200.608803.785502.69180K562MATR3
RFNGENSG00000169733.71273.58200979.277800.379003.775202.68600K562MBNL1
RFNGENSG00000169733.7398.05350234.113300.765703.178001.76550K562NONO
RFNGENSG00000169733.7805.32490652.104700.304402.869502.11120K562NSUN2
RFNGENSG00000169733.7891.59470418.792401.090106.370104.68170K562PABPN1
RFNGENSG00000169733.7531.03360340.162700.642504.987003.83270K562PPIG
RFNGENSG00000169733.7908.14460497.900200.867003.939102.08720K562PPP1R8
RFNGENSG00000169733.7504.25800323.664900.639603.051902.09620K562PSIP1
RFNGENSG00000169733.7589.035301006.60270-0.773103.360602.46150K562PUF60
RFNGENSG00000169733.71384.97870816.800700.7617010.114509.12280K562PUS1
RFNGENSG00000169733.71348.36440795.973400.7603010.256809.13980K562RBM15
RFNGENSG00000169733.7332.46220187.992900.822404.520503.41600K562RBM22
RFNGENSG00000169733.7337.79690183.345900.881503.151701.63780K562RBM34
RFNGENSG00000169733.7626.77250235.031201.415006.247105.01230K562RPS19
RFNGENSG00000169733.7414.06440273.419700.598603.130602.05780K562RPS3
RFNGENSG00000169733.7739.23770382.997900.948604.289002.69710K562SF1
RFNGENSG00000169733.7173.67140106.395300.706802.865901.99510K562SF3B4
RFNGENSG00000169733.7917.87210466.919300.975004.860102.93850K562SFPQ
RFNGENSG00000169733.765.62540121.95960-0.894103.057701.37670K562SND1
RFNGENSG00000169733.7441.06120280.164100.654603.170502.05410K562SRFBP1
RFNGENSG00000169733.7371.09490192.341100.948008.241407.03080K562SRSF1
RFNGENSG00000169733.7415.22700263.934100.653604.311402.95030K562SRSF4
RFNGENSG00000169733.7420.05830181.710601.2088010.918808.68460K562SRSF5
RFNGENSG00000169733.7305.85560423.91370-0.470902.208401.47360K562SYNCRIP
RFNGENSG00000169733.7484.88950194.610401.317003.701102.87860K562TARDBP
RFNGENSG00000169733.7481.36270187.737201.3583014.7373012.72810K562TIA1
RFNGENSG00000169733.7431.07010184.347501.225405.101403.52690K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RFNG is not available on ENCORE database.





34 RBPs can affect the splicing of RFNG :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERFNGENSG00000169733.7chr17-8000875280008892800085378000864080009169800092180.058000.000890.02448includedHepG2HNRNPK
SERFNGENSG00000169733.7chr17-8000888780009065800085378000864080009169800092180.088000.000200.02513includedHepG2SRSF7
SERFNGENSG00000169733.7chr17-800088878000906580008537800086408000916980009218-0.057000.001470.06477excludedHepG2PCBP1
SERFNGENSG00000169733.7chr17-8000880280008892800085378000864080009169800092180.170000.000100.00551includedK562UTP18
A3SSRFNGENSG00000169733.7chr17-8000827780008449800082778000843180008537800086400.095000.000000.00110longerHepG2TIAL1
A3SSRFNGENSG00000169733.7chr17-8000827780008449800082778000843180008537800086400.165000.000020.00017longerK562AQR
A3SSRFNGENSG00000169733.7chr17-8000827780008463800082778000843180008537800086400.122000.000150.05246longerHepG2PCBP2
RIRFNGENSG00000169733.7chr17-800075528000843180007552800078828000827780008431-0.203000.000010.00084excludedHepG2AKAP1
RIRFNGENSG00000169733.7chr17-800075528000843180007552800078828000827780008431-0.209000.000010.00119excludedHepG2HNRNPL
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.202000.000020.00422includedHepG2TBRG4
RIRFNGENSG00000169733.7chr17-800075528000843180007552800078828000827780008431-0.223000.001500.07274excludedK562DROSHA
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.273000.000160.00524includedHepG2PCBP2
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.174000.001390.02996includedHepG2PCBP2
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.286000.000000.00001includedK562PUS1
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.099000.000000.00000includedK562PUS1
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.142000.005730.03490includedK562PUS1
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.145000.001020.01393includedHepG2SF3A3
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.145000.000770.01085includedHepG2SF3A3
RIRFNGENSG00000169733.7chr17-800085378000921880008537800086408000916980009218-0.215000.004200.07455excludedK562HNRNPC
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.066000.000000.00000includedHepG2U2AF2
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.163000.002320.05125includedHepG2UCHL5
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.405000.000000.00000includedHepG2PRPF8
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.364000.000000.00000includedHepG2PRPF8
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.251000.000000.00004includedHepG2PRPF8
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.279000.000000.00000includedK562AGGF1
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.072000.000000.00001includedK562AGGF1
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080008887800092180.266000.000200.00426includedHepG2PCBP1
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.225000.000000.00009includedHepG2PCBP1
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.113000.000240.00488includedHepG2PCBP1
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080008887800092180.190000.001040.01382includedHepG2QKI
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.074000.004060.04282includedHepG2QKI
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.092000.001770.03769includedK562RBM22
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.306000.000000.00000includedK562AKAP8L
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.080000.000000.00000includedK562AKAP8L
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.148000.003830.03529includedK562AKAP8L
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.190000.000190.00257includedK562AKAP8L
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.263000.000000.00001includedHepG2TAF15
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.149000.000720.00911includedHepG2TAF15
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.076000.000000.00000includedHepG2U2AF1
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.174000.001070.01353includedK562RBM15
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.096000.000000.00000includedK562RBM15
RIRFNGENSG00000169733.7chr17-800075528000843180007552800078828000827780008431-0.387000.002020.09746excludedK562EIF3G
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.197000.007850.09821includedHepG2TIAL1
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.265000.003580.05555includedHepG2TIAL1
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.056000.000000.00002includedK562SBDS
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.099000.000800.01191includedHepG2NCBP2
RIRFNGENSG00000169733.7chr17-800075528000843180007552800078828000827780008431-0.196000.001290.06364excludedHepG2HNRNPU
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080008887800092180.227000.000030.00052includedHepG2SF3B4
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.215000.000000.00001includedHepG2SF3B4
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.213000.000000.00000includedHepG2SF3B4
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.258000.000000.00001includedHepG2FUBP3
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.115000.000570.01344includedHepG2FUBP3
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.256000.000000.00000includedHepG2RBM22
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.199000.000000.00003includedHepG2RBM22
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.054000.000020.00074includedHepG2SRSF9
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.155000.000040.00147includedHepG2SRSF9
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.254000.000000.00009includedHepG2SRSF9
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.249000.000000.00000includedHepG2HNRNPK
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.203000.000020.00049includedHepG2HNRNPK
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.090000.000800.02142includedHepG2PTBP1
RIRFNGENSG00000169733.7chr17-8000577780006992800057778000668380006906800069920.075000.000000.00002includedK562UTP18
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.158000.003980.04348includedK562UTP18
RIRFNGENSG00000169733.7chr17-8000755280008431800075528000788280008277800084310.332000.000220.00349includedK562EFTUD2
RIRFNGENSG00000169733.7chr17-8000755280007882800075528000771880007793800078820.537000.000010.00017includedK562EFTUD2
RIRFNGENSG00000169733.7chr17-8000853780009218800085378000864080009169800092180.235000.002290.01424includedK562AQR
RIRFNGENSG00000169733.7chr17-800075528000843180007552800078828000827780008431-0.363000.001940.03615excludedK562PTBP1
RIRFNGENSG00000169733.7chr17-800085378000921880008537800086408000916980009218-0.219000.003450.05057excludedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RFNG is not avaliable on ENCORE database.