NOMO1

General Information

Gene Name       : NOMO1
Gene ID             : ENSG00000103512.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NOMO1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NOMO1ENSG00000103512.1458.9140.4749.69ENCSR000AEF
HepG2NOMO1ENSG00000103512.14318.87246.01282.44ENCSR985KAT
K562NOMO1ENSG00000103512.1465.1271.5868.35ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NOMO1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NOMO1 RNA is bound by 12 proteins.  







eCLIP assay for NOMO1 is not avaliable on ENCORE database.





12 proteins are bound to NOMO1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161498947314989523+3'-UTR,CDS3.072245.83767HepG2LARP4
chr161498990514989975+3'-UTR3.371026.51194HepG2IGF2BP1
chr161498983114989969+3'-UTR6.0737816.02117HepG2UPF1
chr161497257514972655+CDS,intron-Proximal3.791327.11719HepG2RPS3
chr161496042114960511+CDS3.278398.66500HepG2LIN28B
chr161497035014970406+CDS,intron-Proximal4.217414.16554HepG2PPIG
chr161497830314978356+CDS,intron-Proximal3.975044.16174HepG2PRPF8
chr161495850214958544+CDS3.694906.46801HepG2SND1
chr161497381714973891+CDS,intron-Proximal4.396705.01214HepG2BUD13
chr161498066114980721+CDS,intron-Proximal3.384257.92562HepG2RPS3
chr161497021214970263+CDS,intron-Proximal3.352758.40553HepG2RPS3
chr161495145614951514+CDS,intron-Proximal3.665904.01314HepG2IGF2BP1
chr161497052714970622+CDS3.600917.86100HepG2RPS3
chr161498295214982980+CDS,intron-Proximal4.342049.09952HepG2IGF2BP1
chr161498066414980716+CDS3.202508.19360HepG2IGF2BP1
chr161495146614951508+CDS3.986459.51448HepG2LIN28B
chr161497035914970427+CDS,intron-Proximal4.9284924.42872HepG2PRPF8
chr161495686914956888+CDS,intron-Proximal4.390646.18596HepG2LIN28B
chr161498071614980720+CDS,intron-Proximal3.502549.45698HepG2IGF2BP1
chr161495150814951515+CDS,intron-Proximal4.627477.54763HepG2LIN28B
chr161498937614989447+CDS3.112897.14637HepG2RPS3
chr161496757714967679+intron-Distal3.361876.07779HepG2SUGP2
chr161496844914968508+intron-Distal4.040373.35169HepG2U2AF2
chr161498289714982930+intron-Proximal3.904533.01266HepG2SF3B4
chr161497272114972783+intron-Proximal3.316383.05460HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NOMO1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NOMO1 is not available on ENCORE database.

  • 123 RBPs can affect the levels of NOMO1.  








The Knockdown/knockout RNA-Seq assay for NOMO1 is not available on ENCORE database.





123 RBPs can affect the gene expression of NOMO1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NOMO1ENSG00000103512.108802.4716015164.63120-0.7847010.501708.86080HepG2ABCF1
NOMO1ENSG00000103512.1014234.2221012659.925600.169002.824802.21190HepG2ACO1
NOMO1ENSG00000103512.1025446.3904017228.867800.562505.986905.23920HepG2AKAP1
NOMO1ENSG00000103512.1022845.0762016061.815300.508105.164103.75560HepG2AKAP8
NOMO1ENSG00000103512.1010714.0685012719.11240-0.247504.415203.46190HepG2AKAP8L
NOMO1ENSG00000103512.1020025.0076017004.717300.235804.263703.44500HepG2AUH
NOMO1ENSG00000103512.1026433.6319011131.599901.2476041.6694039.85850HepG2BOP1
NOMO1ENSG00000103512.1014098.9416011358.464300.311702.835401.58700HepG2BUD13
NOMO1ENSG00000103512.1018321.2399012401.317400.5629012.8296011.37210HepG2CALR
NOMO1ENSG00000103512.1010083.7238013543.51310-0.425604.579803.59800HepG2CIRBP
NOMO1ENSG00000103512.1010812.0764012656.82190-0.227305.398604.52700HepG2CKAP4
NOMO1ENSG00000103512.1015789.1019010219.336700.6275010.406909.15710HepG2CPSF6
NOMO1ENSG00000103512.1016373.1309012484.347700.391104.981103.52380HepG2CPSF7
NOMO1ENSG00000103512.105232.196606704.65170-0.357703.766202.52980HepG2CSTF2
NOMO1ENSG00000103512.1021577.8270015301.887000.4957014.9866013.72530HepG2CELF1
NOMO1ENSG00000103512.1020328.4258016451.555800.3052010.433909.13690HepG2DAZAP1
NOMO1ENSG00000103512.107577.5694011708.45540-0.6277030.0461028.03820HepG2DDX19B
NOMO1ENSG00000103512.106115.859909985.76710-0.707308.518606.42050HepG2DDX27
NOMO1ENSG00000103512.1024407.4648016503.480400.564507.029006.07350HepG2DDX3X
NOMO1ENSG00000103512.1027180.0062014177.941400.9388015.3902014.09390HepG2DDX6
NOMO1ENSG00000103512.105296.1021012112.02700-1.1934084.8067082.50390HepG2DKC1
NOMO1ENSG00000103512.109091.1545010861.98770-0.256806.589605.64300HepG2DNAJC2
NOMO1ENSG00000103512.107606.0616010985.49730-0.530407.009605.61230HepG2EEF2
NOMO1ENSG00000103512.1014826.3280010242.655500.533504.679903.23330HepG2AGO1
NOMO1ENSG00000103512.1021791.6723013628.497100.677109.918608.83770HepG2EIF2S1
NOMO1ENSG00000103512.107695.2147010503.76320-0.448907.490205.86840HepG2EIF3G
NOMO1ENSG00000103512.1010525.7124015060.55810-0.516905.062104.20040HepG2EIF4A3
NOMO1ENSG00000103512.1010372.2843014664.58450-0.499603.831203.02640HepG2EIF4B
NOMO1ENSG00000103512.1022306.4192015548.911100.520507.637706.31320HepG2EIF4G2
NOMO1ENSG00000103512.108522.3097013133.81220-0.624008.343106.59490HepG2ESF1
NOMO1ENSG00000103512.1011476.8178019524.02180-0.7665039.6684037.88980HepG2ETF1
NOMO1ENSG00000103512.109800.6759012370.69650-0.336004.142303.12010HepG2EWSR1
NOMO1ENSG00000103512.109740.870007970.669800.289203.659302.29520HepG2FAM120A
NOMO1ENSG00000103512.1020844.7807015311.793500.444903.911303.00860HepG2FIP1L1
NOMO1ENSG00000103512.1015682.6593010359.716100.598109.768008.33830HepG2FUBP3
NOMO1ENSG00000103512.1019209.0350012727.522700.593704.865803.41210HepG2FUS
NOMO1ENSG00000103512.1010838.1115015197.08520-0.487705.609904.64720HepG2FXR1
NOMO1ENSG00000103512.1011221.5656014096.67620-0.329102.518301.88180HepG2G3BP1
NOMO1ENSG00000103512.1010575.0592014966.53780-0.501106.098404.76500HepG2G3BP2
NOMO1ENSG00000103512.1018965.2408012086.391100.6499026.9189024.39770HepG2HDGF
NOMO1ENSG00000103512.104105.3290011063.68810-1.4303056.4612054.33920HepG2HNRNPA1
NOMO1ENSG00000103512.1018425.7324015120.285400.285106.238604.93150HepG2HNRNPA2B1
NOMO1ENSG00000103512.109800.1629012306.32630-0.328503.705902.91350HepG2HNRNPC
NOMO1ENSG00000103512.1020993.6145014276.143200.556208.548007.37280HepG2HNRNPK
NOMO1ENSG00000103512.1018053.0158014985.583400.268608.742507.60990HepG2HNRNPL
NOMO1ENSG00000103512.1013804.4220011055.034400.320302.873702.23360HepG2HNRNPLL
NOMO1ENSG00000103512.1013720.3636012487.391700.135702.660201.94080HepG2ILF2
NOMO1ENSG00000103512.108094.2506015202.39790-0.9093016.5325014.99710HepG2MAGOH
NOMO1ENSG00000103512.1018727.4477012388.646100.5960011.394109.86850HepG2MSI2
NOMO1ENSG00000103512.1014896.3102010403.681100.517808.083606.05350HepG2NAA15
NOMO1ENSG00000103512.1020304.7133015647.107900.375803.263802.57750HepG2NCBP2
NOMO1ENSG00000103512.1025152.7041013933.789900.8520014.6593013.03700HepG2PABPC4
NOMO1ENSG00000103512.1014896.5861012100.596700.299806.364905.16170HepG2PARN
NOMO1ENSG00000103512.109433.9016014364.68100-0.6066024.6316023.12160HepG2PCBP1
NOMO1ENSG00000103512.1017448.8157013213.636600.4010010.612909.24150HepG2PRPF4
NOMO1ENSG00000103512.108521.7900012665.28260-0.571704.108402.63810HepG2PRPF6
NOMO1ENSG00000103512.106235.511908232.53370-0.400803.907102.96650HepG2PRPF8
NOMO1ENSG00000103512.1011208.8766014616.56390-0.3830010.145509.22610HepG2PTBP1
NOMO1ENSG00000103512.1012793.1632015573.06760-0.283702.868302.26240HepG2PUF60
NOMO1ENSG00000103512.1021345.4375016519.635400.369606.539605.52430HepG2PUM2
NOMO1ENSG00000103512.107984.5843012894.90380-0.6915036.2979034.55070HepG2PUS1
NOMO1ENSG00000103512.1025100.4302015830.176600.6649020.5957019.11630HepG2QKI
NOMO1ENSG00000103512.107782.8152011625.77640-0.579003.457402.67130HepG2RAVER1
NOMO1ENSG00000103512.1019080.4052016194.528000.236502.848701.98030HepG2RBM15
NOMO1ENSG00000103512.1011060.9917016318.40040-0.5610016.8245015.76730HepG2RBM22
NOMO1ENSG00000103512.1021503.8063014366.873700.5817011.8415010.50640HepG2RBM25
NOMO1ENSG00000103512.109659.6432012527.24320-0.375003.890502.69960HepG2RBM27
NOMO1ENSG00000103512.106100.7389010172.67650-0.7376010.476708.46470HepG2RCC2
NOMO1ENSG00000103512.109172.1514016266.86230-0.8266045.0545043.47030HepG2NELFE
NOMO1ENSG00000103512.109459.1143015150.31710-0.6796031.8308030.16150HepG2RECQL
NOMO1ENSG00000103512.1010520.7872014499.65260-0.462807.070306.05380HepG2RPLP0
NOMO1ENSG00000103512.109111.6815011553.40270-0.342503.417002.52850HepG2RPS2
NOMO1ENSG00000103512.108579.5929012621.24210-0.556904.641103.60740HepG2RPS3A
NOMO1ENSG00000103512.109196.1214011793.55480-0.358903.643202.40420HepG2RPS5
NOMO1ENSG00000103512.1013531.8311010886.859000.313708.932307.87670HepG2SAFB2
NOMO1ENSG00000103512.1012350.1510015217.79450-0.301207.041706.16710HepG2SF3B4
NOMO1ENSG00000103512.1017442.9036014933.295400.224006.136005.15670HepG2SLBP
NOMO1ENSG00000103512.1010256.0270012695.89860-0.3079010.808309.67080HepG2SMN1
NOMO1ENSG00000103512.1018964.3371012175.134200.639305.151704.07480HepG2SNRNP70
NOMO1ENSG00000103512.1014630.8814018430.91080-0.3331010.521209.71430HepG2SRFBP1
NOMO1ENSG00000103512.1014405.6505015884.05630-0.140902.188401.75450HepG2SRSF1
NOMO1ENSG00000103512.1019029.7466015376.807900.307407.609606.63960HepG2SRSF5
NOMO1ENSG00000103512.1014160.1348012922.503100.131801.774701.31540HepG2SRSF9
NOMO1ENSG00000103512.106171.4799016002.18130-1.37460126.03730123.98130HepG2SSB
NOMO1ENSG00000103512.1013485.7719017424.59320-0.369702.825901.53180HepG2SSRP1
NOMO1ENSG00000103512.107723.0572010979.55610-0.507604.104002.74120HepG2STIP1
NOMO1ENSG00000103512.1012496.4571017641.71620-0.497504.020502.40880HepG2SUGP2
NOMO1ENSG00000103512.1016087.0983010336.067500.6381012.8720010.96580HepG2SUPT6H
NOMO1ENSG00000103512.107258.4563010624.27820-0.549606.295405.33610HepG2SUPV3L1
NOMO1ENSG00000103512.1022001.2767014277.135800.6238020.3881019.06220HepG2TAF15
NOMO1ENSG00000103512.1023853.4837010775.805601.1463033.7391031.75380HepG2TARDBP
NOMO1ENSG00000103512.1019977.0555013118.820700.6066013.3978011.59060HepG2TIA1
NOMO1ENSG00000103512.107596.8130011878.76510-0.6449016.5646015.52640HepG2TIAL1
NOMO1ENSG00000103512.1015832.3744011985.028400.4015011.6522010.61090HepG2TRIM56
NOMO1ENSG00000103512.1018253.3913015215.143400.262603.194702.24960HepG2TUFM
NOMO1ENSG00000103512.1010996.5721013096.12640-0.252102.447701.85400HepG2U2AF1
NOMO1ENSG00000103512.1010386.0380016105.59180-0.632908.114406.65180HepG2UBE2L3
NOMO1ENSG00000103512.107849.377106275.982300.322602.608701.87270HepG2UCHL5
NOMO1ENSG00000103512.1018143.5334012426.939900.5459023.2579021.62150HepG2UPF1
NOMO1ENSG00000103512.106629.614309728.17790-0.553204.501003.20270HepG2UPF2
NOMO1ENSG00000103512.1013666.3519011997.716200.187802.984802.36710HepG2UTP3
NOMO1ENSG00000103512.103669.0869010458.44140-1.5112046.9966044.38980HepG2XRN2
NOMO1ENSG00000103512.1025747.4740013667.249500.9136089.4734087.53170HepG2ZNF622
NOMO1ENSG00000103512.102024.939402512.52420-0.311304.960904.23780K562AGGF1
NOMO1ENSG00000103512.101683.162801283.324700.391205.503503.31000K562AKAP1
NOMO1ENSG00000103512.101699.303702491.55360-0.552106.683105.83510K562AQR
NOMO1ENSG00000103512.102045.695901537.138500.412203.595102.60200K562BOP1
NOMO1ENSG00000103512.101960.803201300.387300.592407.787205.95170K562DDX3X
NOMO1ENSG00000103512.104344.138602641.475100.7176015.7768014.33560K562DDX47
NOMO1ENSG00000103512.103133.255902287.914600.453508.580407.41920K562EIF2S2
NOMO1ENSG00000103512.102392.474601007.528801.247607.259605.59160K562EIF3A
NOMO1ENSG00000103512.103143.700101749.543000.845406.440004.76470K562EIF3D
NOMO1ENSG00000103512.102166.415801190.803000.8633018.3416016.23190K562EIF3G
NOMO1ENSG00000103512.101595.180601281.726800.315503.318001.34740K562FUBP3
NOMO1ENSG00000103512.102246.610801412.902600.6690015.6400014.30960K562FXR1
NOMO1ENSG00000103512.10851.398801141.47760-0.423002.454001.79420K562G3BP2
NOMO1ENSG00000103512.102555.842303048.81860-0.254502.241101.55730K562GRSF1
NOMO1ENSG00000103512.101646.001402059.95390-0.323602.328901.34960K562HNRNPA1
NOMO1ENSG00000103512.10879.678301504.91290-0.7746012.2306011.04890K562HNRNPC
NOMO1ENSG00000103512.101594.091702281.37100-0.517208.425806.87860K562HNRNPU
NOMO1ENSG00000103512.101994.996901576.025300.340002.959301.71720K562IGF2BP3
NOMO1ENSG00000103512.101784.733801356.617600.395604.635203.03670K562NCBP2
NOMO1ENSG00000103512.102104.983802452.76400-0.220603.660502.81510K562NSUN2
NOMO1ENSG00000103512.101986.010102519.16610-0.343102.909202.06500K562PPIG
NOMO1ENSG00000103512.101972.959001581.649100.318802.539501.89930K562PTBP1
NOMO1ENSG00000103512.103116.913902593.095500.265302.022801.54470K562PUS1
NOMO1ENSG00000103512.103019.379601619.702400.8984012.9172011.13030K562RPS19
NOMO1ENSG00000103512.102023.849501421.972900.509104.920603.53810K562RPS3
NOMO1ENSG00000103512.102501.773501893.404800.401904.510703.12070K562SAFB
NOMO1ENSG00000103512.102587.021801222.434601.081405.469203.59930K562SF1
NOMO1ENSG00000103512.102306.182501550.652900.572508.775807.52340K562SRSF1
NOMO1ENSG00000103512.101581.289001965.85730-0.314104.192502.73250K562SRSF7
NOMO1ENSG00000103512.103106.024002131.395800.543209.474907.95130K562SYNCRIP
NOMO1ENSG00000103512.101187.567401569.12590-0.402002.980002.24590K562TARDBP
NOMO1ENSG00000103512.102407.381502833.87500-0.235303.145901.78660K562TROVE2
NOMO1ENSG00000103512.101431.324701106.147300.371702.419401.40730K562U2AF1
NOMO1ENSG00000103512.101302.356301629.44220-0.323302.291801.37300K562UCHL5
NOMO1ENSG00000103512.101794.422502225.35390-0.310502.980102.07290K562WDR3
NOMO1ENSG00000103512.102330.466002807.01510-0.268402.273701.50360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NOMO1 is not available on ENCORE database.





19 RBPs can affect the splicing of NOMO1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENOMO1ENSG00000103512.10chr16+1495107314951179149477931494788314951361149514080.143000.001160.08987includedHepG2SRSF7
SENOMO1ENSG00000103512.10chr16+149510731495117914947793149478831495136114951408-0.141000.000370.04778excludedHepG2PCBP2
SENOMO1ENSG00000103512.10chr16+1495107314951179149477931494788314951361149514080.170000.004040.08993includedHepG2SF3A3
A3SSNOMO1ENSG00000103512.10chr16+1496887414969111149688921496911114966066149661860.123000.000030.00433longerHepG2SF3A3
A3SSNOMO1ENSG00000103512.10chr16+149688741496911114968892149691111496609014966186-0.172000.000030.01867shorterHepG2HNRNPUL1
A3SSNOMO1ENSG00000103512.10chr16+1496887414969111149688921496911114966090149661860.328000.000150.09514longerHepG2RBM5
A3SSNOMO1ENSG00000103512.10chr16+149688741496906114968892149690611496609014966186-0.114000.001950.04545shorterHepG2U2AF2
A3SSNOMO1ENSG00000103512.10chr16+1497253814972691149725771497269114970520149706470.056000.000220.00177longerK562AQR
A3SSNOMO1ENSG00000103512.10chr16+1496887414969111149688921496911114966090149661860.162000.010210.05384longerK562AQR
A3SSNOMO1ENSG00000103512.10chr16+1496237514962492149624041496249214960358149605480.341000.000000.00002longerK562AQR
A3SSNOMO1ENSG00000103512.10chr16+149688741496908714968892149690871496609014966186-0.132000.000560.08306shorterHepG2SFPQ
A5SSNOMO1ENSG00000103512.10chr16+1497257714972779149725771497269114973871149739990.057000.000000.00200longerHepG2DKC1
A5SSNOMO1ENSG00000103512.10chr16+1497253814972779149725381497269114973871149739990.245000.000000.00000longerK562AQR
A5SSNOMO1ENSG00000103512.10chr16+149725771497277914972577149726911497387114973999-0.091000.000220.08513shorterK562EIF3G
A5SSNOMO1ENSG00000103512.10chr16+1497253814972779149725381497269114973871149739990.082000.000000.00007longerHepG2TIAL1
A5SSNOMO1ENSG00000103512.10chr16+1497257714972779149725771497269114973871149739990.071000.000000.00002longerHepG2SSB
A5SSNOMO1ENSG00000103512.10chr16+1497253814972779149725381497269114973871149739990.063000.000080.04001longerHepG2HNRNPA1
A5SSNOMO1ENSG00000103512.10chr16+149725771497277914972577149726911497387114973999-0.112000.000110.07054shorterK562IGF2BP2
A5SSNOMO1ENSG00000103512.10chr16+1497257714972779149725771497269114973871149739990.073000.000000.00042longerHepG2XRN2
A5SSNOMO1ENSG00000103512.10chr16+149725771497277914972577149726911497387114973999-0.092000.001790.08277shorterK562SRSF1
A5SSNOMO1ENSG00000103512.10chr16+1497257714972779149725771497269114973871149739990.165000.000000.00005longerHepG2FTO
A5SSNOMO1ENSG00000103512.10chr16+1497257714972779149725771497269114973871149739990.086000.000000.00047longerHepG2U2AF1
MXENOMO1ENSG00000103512.10chr16+1498295214983072149888541498894714980617149807191498937014990017-0.145000.000220.013002includedK562LIN28B

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NOMO1 is not avaliable on ENCORE database.