LCAT

General Information

Gene Name : LCAT
Gene ID : ENSG00000213398.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LCAT)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LCAT	ENSG00000213398.7	0.58	2.34	1.46	ENCSR000AEF
HepG2	LCAT	ENSG00000213398.7	49.20	21.50	35.35	ENCSR985KAT
K562	LCAT	ENSG00000213398.7	4.01	3.39	3.70	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LCAT is not avaliable on ENCORE database.

Proteins bound to RNA

LCAT RNA is bound by 27 proteins.

eCLIP assay for LCAT is not avaliable on ENCORE database.

27 proteins are bound to LCAT RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	67976658	67976671	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.05410	5.07457	HepG2	BCLAF1
chr16	67976478	67976544	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.15341	18.78707	HepG2	EFTUD2
chr16	67976229	67976267	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.19351	3.25089	HepG2	AQR
chr16	67974036	67974111	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.73407	10.10753	HepG2	PABPN1
chr16	67974135	67974208	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.18229	7.10571	HepG2	LSM11
chr16	67974145	67974203	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11579	4.15208	K562	RBM15
chr16	67976274	67976327	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.18329	6.35686	HepG2	PABPN1
chr16	67974346	67974421	-	3'-UTR,CDS,intron-Distal	4.80157	6.38747	HepG2	AQR
chr16	67976565	67976622	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01703	8.66679	HepG2	BUD13
chr16	67974188	67974193	-	3'-UTR,CDS,intron-Distal	3.03462	3.60157	HepG2	GRWD1
chr16	67976584	67976649	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11434	6.91339	HepG2	PABPN1
chr16	67973975	67974036	-	3'-UTR,CDS,intron-Distal	4.00561	7.42587	HepG2	PABPN1
chr16	67976574	67976607	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.26382	6.39282	HepG2	GRWD1
chr16	67976519	67976604	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.08948	15.72115	HepG2	PRPF8
chr16	67974153	67974200	-	3'-UTR,CDS,intron-Distal	3.55552	7.57890	HepG2	RBM15
chr16	67976658	67976670	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.31843	10.72269	HepG2	PPIG
chr16	67976482	67976511	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.12083	9.30359	HepG2	BUD13
chr16	67976573	67976632	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22943	17.98460	HepG2	PPIG
chr16	67976470	67976491	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.40777	16.69785	HepG2	PPIG
chr16	67974156	67974204	-	3'-UTR,CDS,intron-Distal	4.46250	3.19682	HepG2	PABPN1
chr16	67977096	67977217	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.08773	17.99486	HepG2	GTF2F1
chr16	67977118	67977171	-	5'-UTR,intron-Distal,intron-Proximal	3.13116	8.80574	HepG2	XRN2
chr16	67977093	67977179	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.44681	7.22162	HepG2	SUPV3L1
chr16	67977108	67977184	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.75824	23.69285	HepG2	RBFOX2
chr16	67976957	67977009	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.15801	6.94111	HepG2	UCHL5
chr16	67976801	67976856	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.42731	4.14504	HepG2	PABPN1
chr16	67976764	67976814	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.37172	9.58230	HepG2	GRWD1
chr16	67976957	67977004	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.02494	20.07664	HepG2	GRWD1
chr16	67977327	67977394	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal,polyA_site	4.12510	12.84492	HepG2	PRPF4
chr16	67977089	67977195	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.38443	8.53255	K562	PRPF8
chr16	67977080	67977192	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.61548	5.55220	K562	CSTF2T
chr16	67976871	67976879	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.45308	6.58996	HepG2	GRWD1
chr16	67977344	67977363	-	5'-UTR,intron-Distal,intron-Proximal	4.58056	4.50934	HepG2	RBFOX2
chr16	67977076	67977152	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.24413	15.49396	HepG2	PRPF8
chr16	67977112	67977169	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.67411	5.83675	HepG2	SF3B4
chr16	67977988	67978029	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.47761	3.55754	HepG2	U2AF2
chr16	67976877	67976927	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.16346	3.60305	HepG2	SF3B4
chr16	67977184	67977260	-	5'-UTR,intron-Distal,intron-Proximal	4.98554	32.83587	HepG2	PRPF4
chr16	67977155	67977203	-	5'-UTR,intron-Distal,intron-Proximal	3.72657	4.12529	K562	GTF2F1
chr16	67977114	67977166	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.77832	3.01428	K562	UCHL5
chr16	67977177	67977220	-	5'-UTR,intron-Distal,intron-Proximal	4.07067	13.86499	HepG2	FAM120A
chr16	67976874	67976878	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.43770	8.68543	HepG2	PPIG
chr16	67976771	67976801	-	5'-UTR,CDS,intron-Distal	3.75909	4.77549	HepG2	PABPN1
chr16	67977009	67977066	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.71552	5.27922	HepG2	UCHL5
chr16	67977121	67977202	-	5'-UTR,intron-Distal,intron-Proximal	3.03526	10.91643	HepG2	PPIG
chr16	67977114	67977177	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.49895	20.33741	HepG2	FAM120A
chr16	67977146	67977184	-	5'-UTR,intron-Distal,intron-Proximal	4.93293	31.65292	HepG2	PRPF4
chr16	67977417	67977461	-	3'-UTR,5'-UTR,intron-Distal	3.26324	5.98058	HepG2	RBFOX2
chr16	67977152	67977186	-	5'-UTR,intron-Distal,intron-Proximal	3.40733	18.41311	HepG2	PRPF8
chr16	67977184	67977229	-	5'-UTR,intron-Distal,intron-Proximal	4.67886	18.01244	HepG2	RBFOX2
chr16	67977088	67977191	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.05391	14.14667	K562	UPF1
chr16	67976958	67977048	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.57447	29.61829	HepG2	PPIG
chr16	67977116	67977220	-	5'-UTR,intron-Distal,intron-Proximal	3.07920	3.42485	K562	AKAP8L
chr16	67977239	67977292	-	5'-UTR,intron-Distal,intron-Proximal	3.61745	5.63456	HepG2	RBFOX2
chr16	67977461	67977518	-	3'-UTR,5'-UTR,intron-Distal	3.21448	6.22577	HepG2	RBFOX2
chr16	67977090	67977194	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.29104	11.57272	HepG2	AQR
chr16	67977413	67977481	-	3'-UTR,5'-UTR,intron-Distal	3.46727	8.82289	HepG2	HNRNPK
chr16	67977089	67977162	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.13765	15.17890	HepG2	EFTUD2
chr16	67976768	67976813	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.01552	4.17466	K562	DDX24
chr16	67977178	67977250	-	5'-UTR,intron-Distal,intron-Proximal	3.72463	8.18461	HepG2	PCBP2
chr16	67977122	67977175	-	5'-UTR,intron-Distal,intron-Proximal	3.00514	4.28712	HepG2	RBM5
chr16	67976763	67976817	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.92608	22.40499	HepG2	PPIG
chr16	67977004	67977074	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.31412	19.25416	HepG2	GRWD1
chr16	67977102	67977178	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.21191	3.27618	K562	RBFOX2
chr16	67977088	67977146	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.06058	30.62740	HepG2	PRPF4
chr16	67976767	67976822	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.80308	8.74079	HepG2	PRPF4
chr16	67977192	67977208	-	5'-UTR,intron-Distal,intron-Proximal	3.39027	3.27079	HepG2	XRN2
chr16	67977070	67977121	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.13396	9.14877	HepG2	PPIG
chr16	67977815	67977853	-	3'-UTR,CDS,intron-Distal	3.28537	12.80713	HepG2	PRPF8
chr16	67975466	67975522	-	intron-Distal	4.10757	4.51536	HepG2	HNRNPC
chr16	67977585	67977642	-	3'-UTR,intron-Distal,intron-Proximal	3.63601	23.30624	HepG2	RBFOX2
chr16	67977618	67977658	-	3'-UTR,intron-Distal,intron-Proximal	3.16803	5.12765	HepG2	RBM15
chr16	67977686	67977730	-	3'-UTR,intron-Distal	3.51048	6.64595	HepG2	RBFOX2
chr16	67977664	67977714	-	3'-UTR,intron-Distal	3.83964	5.15405	HepG2	PRPF4
chr16	67977689	67977714	-	3'-UTR,intron-Distal	3.23107	4.72062	HepG2	PRPF8
chr16	67978106	67978132	-	3'-UTR,intron-Distal,intron-Proximal	3.41174	4.84286	HepG2	PRPF4
chr16	67978052	67978121	-	3'-UTR,intron-Distal,intron-Proximal	4.32244	19.31252	HepG2	HNRNPK
chr16	67976493	67976548	-	intron-Distal,intron-Proximal	4.26148	4.96473	HepG2	SUPV3L1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for LCAT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LCAT is not available on ENCORE database.
111 RBPs can affect the levels of LCAT.

The Knockdown/knockout RNA-Seq assay for LCAT is not available on ENCORE database.

111 RBPs can affect the gene expression of LCAT :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LCAT	ENSG00000213398.3	221.11220	452.03490	-1.03170	6.34220	4.78950	HepG2	AATF
LCAT	ENSG00000213398.3	648.35230	923.31360	-0.51000	7.28950	6.39940	HepG2	ACO1
LCAT	ENSG00000213398.3	534.25560	336.67520	0.66610	5.14020	3.84180	HepG2	ADAR
LCAT	ENSG00000213398.3	223.71370	1133.56680	-2.34110	13.58410	12.49760	HepG2	AKAP1
LCAT	ENSG00000213398.3	1109.33700	589.68280	0.91160	7.79460	6.17710	HepG2	BCCIP
LCAT	ENSG00000213398.3	661.54050	491.87570	0.42740	2.80010	2.19870	HepG2	BOP1
LCAT	ENSG00000213398.3	1106.23570	793.62920	0.47900	2.92810	1.92410	HepG2	CCAR1
LCAT	ENSG00000213398.3	2150.65540	891.04280	1.27110	25.74250	23.71480	HepG2	CIRBP
LCAT	ENSG00000213398.3	829.66990	451.55160	0.87750	10.01060	8.78290	HepG2	CPSF6
LCAT	ENSG00000213398.3	506.47730	345.25770	0.55270	4.03110	2.79910	HepG2	YBX3
LCAT	ENSG00000213398.3	272.31940	463.10330	-0.76600	2.89100	1.49520	HepG2	CSTF2T
LCAT	ENSG00000213398.3	525.84380	728.22920	-0.46980	4.36540	3.59070	HepG2	CELF1
LCAT	ENSG00000213398.3	1168.51840	782.87900	0.57770	11.92800	10.56410	HepG2	DAZAP1
LCAT	ENSG00000213398.3	616.30500	853.89110	-0.47040	6.44170	5.24880	HepG2	DDX19B
LCAT	ENSG00000213398.3	699.66580	498.09230	0.49020	3.88150	3.09140	HepG2	DDX21
LCAT	ENSG00000213398.3	385.65460	579.81170	-0.58830	3.98880	3.07770	HepG2	DDX55
LCAT	ENSG00000213398.3	1070.79080	764.63860	0.48570	3.86470	2.67830	HepG2	DDX5
LCAT	ENSG00000213398.3	503.59950	933.07510	-0.88970	4.26650	3.51250	HepG2	DDX6
LCAT	ENSG00000213398.3	634.75170	326.97910	0.95690	11.58480	9.76090	HepG2	DHX30
LCAT	ENSG00000213398.3	1437.27560	883.33740	0.70220	14.62410	13.32490	HepG2	DKC1
LCAT	ENSG00000213398.3	542.85120	339.01280	0.67910	7.22640	6.13310	HepG2	DNAJC21
LCAT	ENSG00000213398.3	765.98460	462.36790	0.72820	6.30210	4.96410	HepG2	EEF2
LCAT	ENSG00000213398.3	705.89660	470.72130	0.58450	5.80250	4.32390	HepG2	EIF3G
LCAT	ENSG00000213398.3	1611.83740	990.55880	0.70230	6.85470	5.84660	HepG2	EIF4A3
LCAT	ENSG00000213398.3	989.60710	772.48410	0.35730	4.15890	3.17170	HepG2	EIF4G1
LCAT	ENSG00000213398.3	1047.66440	739.96770	0.50150	2.15580	1.43020	HepG2	EIF4G2
LCAT	ENSG00000213398.3	1747.47470	1195.48510	0.54760	10.22790	9.19050	HepG2	ETF1
LCAT	ENSG00000213398.3	666.53680	902.16180	-0.43670	2.95710	2.09660	HepG2	EWSR1
LCAT	ENSG00000213398.3	1377.02470	927.38570	0.57020	3.96020	3.17110	HepG2	G3BP1
LCAT	ENSG00000213398.3	1438.87020	984.99350	0.54670	3.67110	2.63670	HepG2	G3BP2
LCAT	ENSG00000213398.3	529.13310	334.14700	0.66300	4.81720	3.63460	HepG2	GEMIN5
LCAT	ENSG00000213398.3	1813.60360	511.82180	1.82500	40.72690	38.62890	HepG2	GPKOW
LCAT	ENSG00000213398.3	649.09180	442.23270	0.55350	2.94550	1.79800	HepG2	GRSF1
LCAT	ENSG00000213398.3	694.65870	881.44510	-0.34360	3.56010	2.46200	HepG2	HDGF
LCAT	ENSG00000213398.3	782.62050	342.26070	1.19310	17.97180	16.55850	HepG2	HNRNPA1
LCAT	ENSG00000213398.3	822.76960	380.70390	1.11170	8.67410	7.49950	HepG2	HNRNPC
LCAT	ENSG00000213398.3	998.84720	555.58680	0.84620	15.66440	14.14040	HepG2	HNRNPF
LCAT	ENSG00000213398.3	540.16110	713.09850	-0.40070	3.73170	2.95670	HepG2	HNRNPL
LCAT	ENSG00000213398.3	1403.85010	488.44520	1.52300	8.09560	7.08200	HepG2	HNRNPLL
LCAT	ENSG00000213398.3	474.32830	652.06110	-0.45910	3.18260	2.16840	HepG2	HNRNPM
LCAT	ENSG00000213398.3	505.24640	378.18680	0.41780	3.27840	2.62210	HepG2	HNRNPU
LCAT	ENSG00000213398.3	1181.27980	547.08620	1.11040	22.14940	20.33830	HepG2	IGF2BP1
LCAT	ENSG00000213398.3	1727.42000	942.54350	0.87390	11.90840	10.61430	HepG2	IGF2BP2
LCAT	ENSG00000213398.3	1170.31450	838.47060	0.48100	3.11380	2.22950	HepG2	LARP4
LCAT	ENSG00000213398.3	348.55570	477.82200	-0.45510	2.79660	1.65670	HepG2	LARP7
LCAT	ENSG00000213398.3	741.40470	501.67210	0.56340	4.57830	3.00820	HepG2	LIN28B
LCAT	ENSG00000213398.3	1468.93510	1000.44590	0.55400	3.01500	2.33120	HepG2	MAGOH
LCAT	ENSG00000213398.3	261.77270	392.76100	-0.58530	2.56850	1.55240	HepG2	METAP2
LCAT	ENSG00000213398.3	924.32890	498.25350	0.89140	6.88140	5.32140	HepG2	MTPAP
LCAT	ENSG00000213398.3	946.06770	598.80280	0.65980	3.98710	2.27190	HepG2	NOLC1
LCAT	ENSG00000213398.3	921.27830	433.13430	1.08870	15.27040	13.67200	HepG2	NSUN2
LCAT	ENSG00000213398.3	816.62640	436.68200	0.90300	5.93000	4.59240	HepG2	PABPC1
LCAT	ENSG00000213398.3	1544.55590	916.47570	0.75290	8.58540	7.33230	HepG2	PABPC4
LCAT	ENSG00000213398.3	498.51650	337.31200	0.56350	5.05730	4.08900	HepG2	PPIL4
LCAT	ENSG00000213398.3	999.35540	568.79350	0.81300	15.76270	14.16250	HepG2	PRPF4
LCAT	ENSG00000213398.3	647.44330	1078.71570	-0.73650	12.91450	11.90580	HepG2	PTBP1
LCAT	ENSG00000213398.3	1837.42020	741.09540	1.30990	34.06280	32.26390	HepG2	PUF60
LCAT	ENSG00000213398.3	449.47680	786.75290	-0.80770	8.90040	7.96530	HepG2	PUM1
LCAT	ENSG00000213398.3	611.91250	786.14880	-0.36150	2.50770	1.86890	HepG2	PUM2
LCAT	ENSG00000213398.3	773.50050	1168.28460	-0.59490	4.77850	3.99050	HepG2	QKI
LCAT	ENSG00000213398.3	138.86290	443.56950	-1.67550	10.73840	9.41470	HepG2	RAVER1
LCAT	ENSG00000213398.3	859.14130	572.04260	0.58670	4.40640	2.17730	HepG2	RBM14
LCAT	ENSG00000213398.3	445.93420	1096.75730	-1.29830	29.93670	27.65660	HepG2	RBM15
LCAT	ENSG00000213398.3	818.24610	1060.29000	-0.37390	3.14770	2.43330	HepG2	RBM25
LCAT	ENSG00000213398.3	992.03850	467.88430	1.08410	13.13390	10.89620	HepG2	RCC2
LCAT	ENSG00000213398.3	813.92120	1200.51050	-0.56070	8.63830	7.77990	HepG2	NELFE
LCAT	ENSG00000213398.3	867.01520	1118.10610	-0.36690	4.13880	3.40500	HepG2	RECQL
LCAT	ENSG00000213398.3	810.96150	598.62520	0.43790	2.98380	2.27750	HepG2	RPLP0
LCAT	ENSG00000213398.3	798.66410	436.04370	0.87300	5.80240	4.46670	HepG2	RPS10
LCAT	ENSG00000213398.3	754.49210	531.38310	0.50570	3.61310	2.70220	HepG2	RPS2
LCAT	ENSG00000213398.3	871.07430	479.95850	0.85980	7.24290	5.95990	HepG2	RPS3A
LCAT	ENSG00000213398.3	282.10990	442.26960	-0.64870	4.04940	3.11970	HepG2	RRP9
LCAT	ENSG00000213398.3	817.40350	483.43710	0.75760	7.92160	6.78400	HepG2	SF3B1
LCAT	ENSG00000213398.3	763.63410	1123.08970	-0.55650	5.40260	4.62330	HepG2	SF3B4
LCAT	ENSG00000213398.3	1032.02720	710.69230	0.53810	9.20980	8.04690	HepG2	SLBP
LCAT	ENSG00000213398.3	569.52920	309.50940	0.87970	2.58380	1.33230	HepG2	SNRNP200
LCAT	ENSG00000213398.3	902.72650	1128.55270	-0.32210	3.56040	3.01400	HepG2	SRFBP1
LCAT	ENSG00000213398.3	739.66530	1172.25950	-0.66430	12.03260	11.19500	HepG2	SRSF1
LCAT	ENSG00000213398.3	341.33460	520.25730	-0.60800	2.52540	1.57240	HepG2	SRSF3
LCAT	ENSG00000213398.3	1126.10250	731.78060	0.62180	9.65690	8.58200	HepG2	SRSF5
LCAT	ENSG00000213398.3	1015.36610	545.87380	0.89530	17.57090	16.08600	HepG2	SRSF7
LCAT	ENSG00000213398.3	386.98000	953.69290	-1.30130	35.19190	33.64960	HepG2	SRSF9
LCAT	ENSG00000213398.3	2429.76460	979.83830	1.31010	63.57490	61.92980	HepG2	SSB
LCAT	ENSG00000213398.3	708.20990	417.62050	0.76190	5.97040	4.30400	HepG2	STIP1
LCAT	ENSG00000213398.3	658.42540	832.18750	-0.33790	2.93240	2.29620	HepG2	SUCLG1
LCAT	ENSG00000213398.3	952.46860	577.14540	0.72260	5.52150	4.61740	HepG2	SUPV3L1
LCAT	ENSG00000213398.3	588.47700	1053.66420	-0.84040	14.89360	13.74560	HepG2	TAF15
LCAT	ENSG00000213398.3	838.84140	476.20770	0.81670	9.15200	7.94280	HepG2	TARDBP
LCAT	ENSG00000213398.3	2254.91250	902.22300	1.32140	4.45060	3.12110	HepG2	TBRG4
LCAT	ENSG00000213398.3	585.98250	968.18270	-0.72440	10.02930	8.45850	HepG2	TIA1
LCAT	ENSG00000213398.3	1175.93630	367.47100	1.67800	48.25380	46.64310	HepG2	TIAL1
LCAT	ENSG00000213398.3	535.99260	370.76460	0.53160	5.31790	4.58750	HepG2	TRIM56
LCAT	ENSG00000213398.3	1111.41880	724.09630	0.61800	6.40210	4.98660	HepG2	TUFM
LCAT	ENSG00000213398.3	1126.20210	808.52590	0.47800	3.26100	2.58370	HepG2	U2AF1
LCAT	ENSG00000213398.3	896.57360	359.79700	1.31710	4.73850	3.42370	HepG2	U2AF2
LCAT	ENSG00000213398.3	2015.51470	1287.32130	0.64670	16.92890	15.48850	HepG2	UPF1
LCAT	ENSG00000213398.3	1065.15830	528.36140	1.01140	8.84100	7.01060	HepG2	UPF2
LCAT	ENSG00000213398.3	694.26670	429.91780	0.69130	4.70680	3.26230	HepG2	XPO5
LCAT	ENSG00000213398.3	176.86400	436.49230	-1.30330	7.41380	5.40240	HepG2	XRCC5
LCAT	ENSG00000213398.3	1537.61170	568.13780	1.43630	25.49220	23.40080	HepG2	XRN2
LCAT	ENSG00000213398.3	1118.73890	561.31740	0.99490	26.56260	24.87230	HepG2	ZC3H8
LCAT	ENSG00000213398.3	138.73030	81.02560	0.77570	2.68960	1.52590	K562	AARS
LCAT	ENSG00000213398.3	110.44600	231.14510	-1.06550	8.08240	7.04630	K562	DDX47
LCAT	ENSG00000213398.3	12.22750	45.35450	-1.89110	1.93090	1.35180	K562	G3BP2
LCAT	ENSG00000213398.3	152.30690	88.57290	0.78190	2.84820	2.24380	K562	HNRNPC
LCAT	ENSG00000213398.3	140.21710	205.38680	-0.55070	2.55820	1.83670	K562	NSUN2
LCAT	ENSG00000213398.3	91.23160	187.97000	-1.04290	5.15130	4.01470	K562	PCBP3
LCAT	ENSG00000213398.3	74.30920	144.17160	-0.95620	4.19250	3.20390	K562	POLR2G
LCAT	ENSG00000213398.3	56.86050	102.53020	-0.85060	2.32780	1.63770	K562	PRPF8
LCAT	ENSG00000213398.3	142.23000	79.42530	0.84050	3.08200	2.12140	K562	PSIP1
LCAT	ENSG00000213398.3	127.50980	80.95040	0.65540	2.35400	1.73380	K562	PTBP1
LCAT	ENSG00000213398.3	233.77860	326.03510	-0.47990	2.34380	1.36820	K562	PUM1
LCAT	ENSG00000213398.3	98.93510	175.36690	-0.82580	3.44090	2.84500	K562	PUS1
LCAT	ENSG00000213398.3	55.89220	104.43190	-0.90180	2.64590	1.85000	K562	RPS19
LCAT	ENSG00000213398.3	195.52000	103.33700	0.91990	2.65190	1.38690	K562	SFPQ
LCAT	ENSG00000213398.3	94.67630	144.61860	-0.61120	2.17050	1.44280	K562	SYNCRIP
LCAT	ENSG00000213398.3	167.59500	80.29980	1.06140	5.46780	4.45610	K562	TARDBP
LCAT	ENSG00000213398.3	149.18960	77.46620	0.94540	4.25940	3.21190	K562	TIA1
LCAT	ENSG00000213398.3	204.00630	311.04130	-0.60850	3.58270	2.57660	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LCAT is not available on ENCORE database.

19 RBPs can affect the splicing of LCAT :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	-0.06100	0.00038	0.00911	excluded	HepG2	U2AF1
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.11900	0.00016	0.02026	included	HepG2	PRPF8
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	-0.07700	0.00037	0.07710	excluded	HepG2	DKC1
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.12700	0.00009	0.00355	included	HepG2	HNRNPK
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	-0.05700	0.00009	0.01160	excluded	HepG2	TBRG4
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.09800	0.00053	0.07664	included	HepG2	TIA1
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	-0.08700	0.00000	0.00027	excluded	HepG2	FTO
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.14800	0.00003	0.00545	included	HepG2	DDX6
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.14400	0.00000	0.00034	included	HepG2	HNRNPL
SE	LCAT	ENSG00000213398.3	chr16	-	67976265	67976490	67973652	67974381	67976573	67976669	-0.13500	0.00000	0.00016	excluded	HepG2	SRSF1
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.10600	0.00019	0.01255	included	HepG2	SF3B4
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.13400	0.00021	0.02901	included	HepG2	TAF15
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	-0.32600	0.00045	0.06533	excluded	K562	ZC3H8
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.12000	0.00026	0.05753	included	HepG2	XRCC6
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.17500	0.00000	0.00010	included	HepG2	HNRNPC
SE	LCAT	ENSG00000213398.3	chr16	-	67974639	67974734	67973784	67974381	67976265	67976490	0.44700	0.00000	0.00000	included	K562	HNRNPC
A3SS	LCAT	ENSG00000213398.3	chr16	-	67976958	67977143	67976958	67977115	67977850	67978034	0.36500	0.00000	0.00000	longer	HepG2	PTBP1
A3SS	LCAT	ENSG00000213398.3	chr16	-	67976958	67977162	67976958	67977115	67977850	67978034	0.22800	0.00000	0.00010	longer	HepG2	KHSRP
A3SS	LCAT	ENSG00000213398.3	chr16	-	67976573	67976708	67976573	67976669	67976763	67976879	0.07900	0.00079	0.06846	longer	HepG2	RBM22
A3SS	LCAT	ENSG00000213398.3	chr16	-	67976958	67977162	67976958	67977115	67977850	67978034	0.33700	0.00000	0.00000	longer	HepG2	RBM22
A3SS	LCAT	ENSG00000213398.3	chr16	-	67976958	67977143	67976958	67977115	67977850	67978034	0.24700	0.00000	0.00002	longer	HepG2	G3BP1
A3SS	LCAT	ENSG00000213398.3	chr16	-	67976958	67977162	67976958	67977115	67977850	67978034	0.25400	0.00000	0.00009	longer	HepG2	SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LCAT

General Information

Functions

Localization

Domains (AlphaFold: LCAT)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LCAT is not avaliable on ENCORE database.

27 proteins are bound to LCAT RNA:

eCLIP assay for LCAT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LCAT is not available on ENCORE database.

111 RBPs can affect the gene expression of LCAT :

The Knockdown/knockout RNA-Seq assay for LCAT is not available on ENCORE database.

19 RBPs can affect the splicing of LCAT :

The Knockdown/knockout RNA-Seq assay for LCAT is not avaliable on ENCORE database.