GABPB1-AS1

General Information

Gene Name       : GABPB1-AS1
Gene ID             : ENSG00000244879.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GABPB1-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GABPB1-AS1ENSG00000244879.710.397.669.03ENCSR000AEF
HepG2GABPB1-AS1ENSG00000244879.712.8113.9113.36ENCSR985KAT
K562GABPB1-AS1ENSG00000244879.713.2111.6212.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GABPB1-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GABPB1-AS1 RNA is bound by 8 proteins.  







eCLIP assay for GABPB1-AS1 is not avaliable on ENCORE database.





8 proteins are bound to GABPB1-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr155065894850659006+intron-Distal3.893757.46127HepG2ILF3
chr155065301150653066+intron-Distal3.766353.18711HepG2ILF3
chr155064782850647878+intron-Distal,intron-Proximal3.353907.57062HepG2RBM15
chr155064781950647898+intron-Distal,intron-Proximal4.452065.14525HepG2SRSF9
chr155065361450653680+intron-Distal3.549644.30020K562KHDRBS1
chr155064783450647894+intron-Distal,intron-Proximal3.686456.81103HepG2PPIG
chr155064782350647890+intron-Distal,intron-Proximal3.043527.47003HepG2GRWD1
chr155064784350647902+intron-Distal4.270964.15208K562RBM15
chr155065405950654101+intron-Distal4.272783.93614HepG2AQR
chr155064774850647826+intron-Proximal4.338787.88170HepG2RBM15
chr155064767150647800+intron-Proximal3.7031913.92650HepG2NCBP2
chr155064829350648332+intron-Proximal3.496763.40321HepG2GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GABPB1-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GABPB1-AS1 is not available on ENCORE database.

  • 127 RBPs can affect the levels of GABPB1-AS1.  








The Knockdown/knockout RNA-Seq assay for GABPB1-AS1 is not available on ENCORE database.





127 RBPs can affect the gene expression of GABPB1-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GABPB1-AS1ENSG00000244879.3263.03560546.14240-1.054002.190701.71110HepG2AKAP1
GABPB1-AS1ENSG00000244879.3381.00080715.36130-0.9089015.2651013.66860HepG2AKAP8L
GABPB1-AS1ENSG00000244879.3711.171901063.55560-0.580609.152208.02430HepG2AUH
GABPB1-AS1ENSG00000244879.3303.64570527.19290-0.795907.136206.22760HepG2BOP1
GABPB1-AS1ENSG00000244879.3714.62930483.977300.562204.363003.51630HepG2CPSF6
GABPB1-AS1ENSG00000244879.3753.56750562.375800.422103.380802.15900HepG2CPSF7
GABPB1-AS1ENSG00000244879.3356.34270252.878200.494702.664601.60620HepG2CSTF2
GABPB1-AS1ENSG00000244879.3520.09000716.33830-0.461904.530703.74370HepG2CELF1
GABPB1-AS1ENSG00000244879.3303.84740441.04390-0.537604.094002.70420HepG2DDX1
GABPB1-AS1ENSG00000244879.3761.08870516.191000.560105.246403.98190HepG2DDX24
GABPB1-AS1ENSG00000244879.3447.51130304.913100.553403.314601.78730HepG2DDX28
GABPB1-AS1ENSG00000244879.3531.05440402.280300.400602.034001.36060HepG2DDX55
GABPB1-AS1ENSG00000244879.3234.90650449.23720-0.935402.047901.50960HepG2DDX6
GABPB1-AS1ENSG00000244879.3720.93330439.421900.714206.217503.41470HepG2EIF3H
GABPB1-AS1ENSG00000244879.3708.86880477.682800.569401.862801.33430HepG2EIF4A3
GABPB1-AS1ENSG00000244879.3960.45170464.845001.046903.070602.34860HepG2EIF4B
GABPB1-AS1ENSG00000244879.3272.21840695.77390-1.3539022.9333020.75110HepG2EWSR1
GABPB1-AS1ENSG00000244879.3760.46700471.980000.688106.131003.63280HepG2EXOSC9
GABPB1-AS1ENSG00000244879.3509.57780689.45640-0.436202.417101.69320HepG2FIP1L1
GABPB1-AS1ENSG00000244879.32310.24560484.837102.252402.876201.84010HepG2FTO
GABPB1-AS1ENSG00000244879.3660.89100261.276901.338705.551404.44920HepG2FUBP3
GABPB1-AS1ENSG00000244879.3657.13380446.933600.556001.910301.35260HepG2G3BP1
GABPB1-AS1ENSG00000244879.31040.33500474.208901.133406.538605.16170HepG2G3BP2
GABPB1-AS1ENSG00000244879.3203.97490386.87710-0.923503.628802.59170HepG2GEMIN5
GABPB1-AS1ENSG00000244879.3327.66990624.25250-0.929906.834705.21830HepG2GNB2L1
GABPB1-AS1ENSG00000244879.3877.76770548.586300.678005.631804.74010HepG2GPKOW
GABPB1-AS1ENSG00000244879.3465.66930679.75530-0.545706.422805.01460HepG2HDGF
GABPB1-AS1ENSG00000244879.3579.25600465.772200.314502.450801.77340HepG2HNRNPF
GABPB1-AS1ENSG00000244879.3897.41990452.081200.989105.862804.87490HepG2HNRNPK
GABPB1-AS1ENSG00000244879.3865.43210701.654300.302602.948102.25420HepG2HNRNPL
GABPB1-AS1ENSG00000244879.3846.95780456.883200.890404.660503.32640HepG2KHSRP
GABPB1-AS1ENSG00000244879.3494.14230650.86000-0.397403.619702.45250HepG2KIF1C
GABPB1-AS1ENSG00000244879.3428.88130611.41590-0.511602.942401.77230HepG2LARP7
GABPB1-AS1ENSG00000244879.31184.12970495.961901.2554010.763009.55540HepG2NCBP2
GABPB1-AS1ENSG00000244879.3394.19940552.88130-0.488002.801901.37440HepG2NIP7
GABPB1-AS1ENSG00000244879.31169.39380464.238001.3327024.1539022.26790HepG2NSUN2
GABPB1-AS1ENSG00000244879.3744.73720441.923600.752803.735302.90460HepG2PABPC4
GABPB1-AS1ENSG00000244879.3700.56770382.382300.8734013.6685012.48260HepG2PCBP1
GABPB1-AS1ENSG00000244879.3480.49900677.09470-0.494803.571401.60620HepG2PES1
GABPB1-AS1ENSG00000244879.3600.06660389.077800.625006.685605.90800HepG2PTBP1
GABPB1-AS1ENSG00000244879.3510.22520729.09610-0.515002.010801.49110HepG2PUF60
GABPB1-AS1ENSG00000244879.3517.59100773.39980-0.579406.040605.06230HepG2PUM2
GABPB1-AS1ENSG00000244879.3536.83070725.17300-0.433904.655803.89670HepG2PUS1
GABPB1-AS1ENSG00000244879.3974.98080421.403201.2101024.1876022.60490HepG2QKI
GABPB1-AS1ENSG00000244879.3361.41500620.86690-0.780602.016201.40510HepG2RAVER1
GABPB1-AS1ENSG00000244879.3837.127701020.64100-0.286002.529402.02810HepG2RBM22
GABPB1-AS1ENSG00000244879.31017.15590737.239100.464204.054302.83570HepG2RBM27
GABPB1-AS1ENSG00000244879.3350.00530598.66790-0.774405.467003.96740HepG2RCC2
GABPB1-AS1ENSG00000244879.3688.45630433.014900.668804.747504.07360HepG2NELFE
GABPB1-AS1ENSG00000244879.3955.17110403.278801.2439029.1479027.53110HepG2RECQL
GABPB1-AS1ENSG00000244879.3788.61210501.625600.652603.360802.61840HepG2RPLP0
GABPB1-AS1ENSG00000244879.3468.92790694.05790-0.565703.040401.91270HepG2RPS5
GABPB1-AS1ENSG00000244879.31071.04130762.528000.490103.166501.77080HepG2SART3
GABPB1-AS1ENSG00000244879.3283.69170867.57520-1.6127022.8664020.86550HepG2SF3A3
GABPB1-AS1ENSG00000244879.3874.76890518.167900.755408.211907.05700HepG2SF3B1
GABPB1-AS1ENSG00000244879.31135.83380405.099001.4873043.6486041.84060HepG2SF3B4
GABPB1-AS1ENSG00000244879.3881.83700699.075600.335003.511502.73700HepG2SLBP
GABPB1-AS1ENSG00000244879.3402.87110501.00460-0.314502.265001.67340HepG2SMN1
GABPB1-AS1ENSG00000244879.3393.20270972.29320-1.306105.062103.14970HepG2SNRNP200
GABPB1-AS1ENSG00000244879.3534.52240422.827900.338102.100001.67220HepG2SRSF1
GABPB1-AS1ENSG00000244879.3548.63700719.86810-0.391903.636702.93690HepG2SRSF5
GABPB1-AS1ENSG00000244879.3898.33230343.986501.3848011.0532010.07950HepG2SRSF9
GABPB1-AS1ENSG00000244879.3750.320701000.84620-0.415603.532002.96860HepG2SSB
GABPB1-AS1ENSG00000244879.3681.20810818.69530-0.265202.202101.63580HepG2SUCLG1
GABPB1-AS1ENSG00000244879.3294.18250465.62900-0.662505.162303.89710HepG2SUPT6H
GABPB1-AS1ENSG00000244879.31271.56330380.033001.7423011.7985010.76610HepG2TAF15
GABPB1-AS1ENSG00000244879.3785.62230349.221101.1696020.4269018.23840HepG2TIA1
GABPB1-AS1ENSG00000244879.3307.86850468.72930-0.606404.939204.31070HepG2TIAL1
GABPB1-AS1ENSG00000244879.3457.24220589.83500-0.367401.877401.34880HepG2U2AF1
GABPB1-AS1ENSG00000244879.3557.63230769.40470-0.464405.415004.48900HepG2UPF1
GABPB1-AS1ENSG00000244879.3574.17030742.83290-0.371603.585802.91920HepG2UTP3
GABPB1-AS1ENSG00000244879.3310.66820846.20050-1.4456042.4446040.96730HepG2ZNF622
GABPB1-AS1ENSG00000244879.3975.34750619.904300.653803.633402.12900HepG2ZRANB2
GABPB1-AS1ENSG00000244879.3197.96170296.77870-0.584203.111001.85060K562AARS
GABPB1-AS1ENSG00000244879.3791.07240605.435200.385702.605001.42750K562ABCF1
GABPB1-AS1ENSG00000244879.3260.885701032.69160-1.9849064.4824061.80300K562AGGF1
GABPB1-AS1ENSG00000244879.3437.931601134.68940-1.3735028.7340025.29010K562AKAP8
GABPB1-AS1ENSG00000244879.3259.497701074.54210-2.0499048.5131045.26120K562AKAP8L
GABPB1-AS1ENSG00000244879.3583.69200759.51910-0.379903.071701.76310K562APOBEC3C
GABPB1-AS1ENSG00000244879.3503.993701127.41490-1.1615023.1345020.32830K562ATP5C1
GABPB1-AS1ENSG00000244879.3492.278901234.18910-1.3260032.9488029.65850K562CCDC124
GABPB1-AS1ENSG00000244879.3709.52220473.528400.583305.360203.23700K562CEBPZ
GABPB1-AS1ENSG00000244879.31472.406101058.577200.475905.155403.81550K562CELF1
GABPB1-AS1ENSG00000244879.3798.364501211.62830-0.601803.530101.86790K562DDX19B
GABPB1-AS1ENSG00000244879.3194.77760309.65880-0.668904.380503.02810K562DDX3X
GABPB1-AS1ENSG00000244879.3495.98290723.90210-0.545506.299205.37300K562DDX47
GABPB1-AS1ENSG00000244879.3458.861101156.41160-1.3335036.6266033.27040K562DKC1
GABPB1-AS1ENSG00000244879.3303.50240203.767100.574703.087201.66880K562DNAJC21
GABPB1-AS1ENSG00000244879.3280.62520390.34160-0.476102.283001.35420K562EIF3D
GABPB1-AS1ENSG00000244879.3219.65950366.97170-0.740406.197505.02360K562EIF3G
GABPB1-AS1ENSG00000244879.3783.45760462.868500.759205.688603.28830K562ESF1
GABPB1-AS1ENSG00000244879.3172.56930282.35980-0.710402.895501.57210K562EWSR1
GABPB1-AS1ENSG00000244879.3298.03160435.27120-0.546402.849001.98750K562FIP1L1
GABPB1-AS1ENSG00000244879.3427.23320281.968100.599403.625202.30910K562FKBP4
GABPB1-AS1ENSG00000244879.3648.42910336.576000.945909.628707.81380K562FTO
GABPB1-AS1ENSG00000244879.3204.98470336.41390-0.714703.930503.22810K562FXR1
GABPB1-AS1ENSG00000244879.3522.74720380.316400.458802.286201.65150K562G3BP2
GABPB1-AS1ENSG00000244879.3619.68850411.441100.590803.103601.89260K562GLRX3
GABPB1-AS1ENSG00000244879.3565.94120358.617800.658103.008701.88630K562HNRNPA1
GABPB1-AS1ENSG00000244879.31544.654701000.035500.627104.063502.13160K562HNRNPAB
GABPB1-AS1ENSG00000244879.3479.18550324.678300.561503.882403.19000K562HNRNPC
GABPB1-AS1ENSG00000244879.3205.06050358.05140-0.804104.939103.65670K562HNRNPM
GABPB1-AS1ENSG00000244879.3777.53390397.097200.9693015.7901013.75510K562HNRNPU
GABPB1-AS1ENSG00000244879.3417.53540590.08660-0.499003.229502.37280K562HSPD1
GABPB1-AS1ENSG00000244879.3805.37760544.618500.564303.399401.30890K562IGF2BP1
GABPB1-AS1ENSG00000244879.31611.86440975.150500.724902.974101.49680K562ILF2
GABPB1-AS1ENSG00000244879.3347.65610191.306800.861706.387804.15350K562KHDRBS1
GABPB1-AS1ENSG00000244879.3447.923801140.42890-1.3483027.5722024.07590K562KIF1C
GABPB1-AS1ENSG00000244879.3359.430901091.61330-1.6027033.8690029.94910K562MAK16
GABPB1-AS1ENSG00000244879.3395.201801277.55850-1.6927045.5507041.99320K562MBNL1
GABPB1-AS1ENSG00000244879.3912.69270432.579801.0771018.4482016.62480K562MTPAP
GABPB1-AS1ENSG00000244879.3291.70920895.46970-1.6181021.6219018.46210K562NAA15
GABPB1-AS1ENSG00000244879.31084.62940480.617201.1741035.9140033.73390K562NSUN2
GABPB1-AS1ENSG00000244879.3207.00970382.48650-0.885706.361603.64940K562PA2G4
GABPB1-AS1ENSG00000244879.3256.87050402.41630-0.647603.963201.77070K562PABPC4
GABPB1-AS1ENSG00000244879.3728.01560449.454500.695703.714302.74870K562PCBP3
GABPB1-AS1ENSG00000244879.3550.00170344.781700.673705.318504.21040K562POLR2G
GABPB1-AS1ENSG00000244879.3119.34440354.77480-1.5718015.0718013.30890K562PRPF8
GABPB1-AS1ENSG00000244879.3770.74890939.16390-0.285102.240401.50700K562PUF60
GABPB1-AS1ENSG00000244879.3165.780501065.79620-2.6846070.1387067.29460K562PUS1
GABPB1-AS1ENSG00000244879.3228.919601038.33740-2.1814064.4884061.55460K562RBM15
GABPB1-AS1ENSG00000244879.3740.38050504.831800.552404.917502.79400K562RBM17
GABPB1-AS1ENSG00000244879.3189.86710361.10780-0.927404.913803.06500K562RBM25
GABPB1-AS1ENSG00000244879.3162.76040361.37150-1.150708.584107.13130K562RPS19
GABPB1-AS1ENSG00000244879.3180.14580362.73530-1.009806.477404.46820K562RRP9
GABPB1-AS1ENSG00000244879.3181.18380307.09980-0.761302.805401.71490K562SAFB
GABPB1-AS1ENSG00000244879.3827.89860474.272900.8036012.3536010.73060K562SF3A3
GABPB1-AS1ENSG00000244879.3733.30530354.353001.049107.893506.20180K562SF3B1
GABPB1-AS1ENSG00000244879.3380.81660208.689600.867606.927804.93870K562SLBP
GABPB1-AS1ENSG00000244879.3601.90230485.905300.308802.330801.46290K562SRPK2
GABPB1-AS1ENSG00000244879.3709.32540485.846000.545803.730602.36350K562SRSF7
GABPB1-AS1ENSG00000244879.3778.46310571.052200.446902.910601.51170K562SSRP1
GABPB1-AS1ENSG00000244879.3828.41240522.268400.665503.230701.85630K562STAU1
GABPB1-AS1ENSG00000244879.3498.37150343.486900.536903.141202.05700K562SUPV3L1
GABPB1-AS1ENSG00000244879.3163.24210345.77700-1.082804.428903.38410K562SYNCRIP
GABPB1-AS1ENSG00000244879.3641.56600373.355300.780903.774001.96250K562TAF15
GABPB1-AS1ENSG00000244879.3645.34710381.017700.760109.176207.70660K562U2AF2
GABPB1-AS1ENSG00000244879.3538.38640363.544500.566403.834702.61740K562UCHL5
GABPB1-AS1ENSG00000244879.3733.29810509.610000.524906.148005.12680K562UPF1
GABPB1-AS1ENSG00000244879.3340.482001080.45930-1.6660016.2968012.73780K562UTP18
GABPB1-AS1ENSG00000244879.3686.82940436.054900.655306.853705.43820K562WDR3
GABPB1-AS1ENSG00000244879.3599.53040453.462300.402803.740802.76630K562WDR43
GABPB1-AS1ENSG00000244879.3850.40630666.915100.350502.527201.71000K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GABPB1-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GABPB1-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GABPB1-AS1 is not avaliable on ENCORE database.