CRIM1

General Information

Gene Name       : CRIM1
Gene ID             : ENSG00000150938.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CRIM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CRIM1ENSG00000150938.92.292.592.44ENCSR000AEF
HepG2CRIM1ENSG00000150938.948.1246.6947.41ENCSR985KAT
K562CRIM1ENSG00000150938.90.020.010.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CRIM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CRIM1 RNA is bound by 44 proteins.  







eCLIP assay for CRIM1 is not avaliable on ENCORE database.





44 proteins are bound to CRIM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr23677615936776211+3'-UTR3.4064718.29492HepG2DDX6
chr23677805236778146+3'-UTR3.2844417.75530HepG2ZC3H11A
chr23677653536776587+3'-UTR4.663504.23131HepG2IGF2BP1
chr23677717836777254+3'-UTR3.8227811.27526HepG2IGF2BP1
chr23677616136776220+3'-UTR3.239523.17663HepG2AKAP1
chr23677615336776232+3'-UTR3.9814710.30645HepG2UPF1
chr23677614536776220+3'-UTR3.388678.28565HepG2FASTKD2
chr23677637436776413+3'-UTR3.065195.15873HepG2IGF2BP1
chr23677636236776398+3'-UTR3.275404.08649HepG2FAM120A
chr23677805336778124+3'-UTR4.610759.09881HepG2TIAL1
chr23677642536776473+3'-UTR3.732265.60238HepG2IGF2BP1
chr23677613436776211+3'-UTR3.7613116.65598HepG2PCBP2
chr23677652636776579+3'-UTR4.341085.69187HepG2TIA1
chr23660546036605532+3'-UTR,CDS,intron-Distal,intron-Proximal3.964548.64802HepG2U2AF2
chr23677617736776227+3'-UTR3.9815918.87439HepG2FAM120A
chr23677731536777357+3'-UTR3.634064.91480HepG2IGF2BP1
chr23677614536776221+3'-UTR3.3011513.41368HepG2LARP4
chr23677805436778084+3'-UTR5.0499242.57245HepG2DDX55
chr23677614436776220+3'-UTR3.8085317.01791HepG2GTF2F1
chr23677716336777251+3'-UTR4.482555.94177HepG2SRSF7
chr23677805536778132+3'-UTR5.5641512.74791HepG2TIA1
chr23660596236606023+3'-UTR,intron-Distal,intron-Proximal4.215824.95101HepG2HNRNPC
chr23677808436778123+3'-UTR4.8342345.66037HepG2DDX55
chr23677652836776587+3'-UTR4.448205.44843HepG2IGF2BP3
chr23677670336776772+3'-UTR3.409385.34980HepG2FUBP3
chr23660573336605792+3'-UTR,intron-Distal,intron-Proximal5.020315.51392HepG2CDC40
chr23677704436777105+3'-UTR3.288085.65230HepG2FUBP3
chr23677805236778133+3'-UTR5.5135116.30390HepG2DDX6
chr23677662636776688+3'-UTR3.072933.84386HepG2IGF2BP3
chr23658329136583362+5'-UTR3.177183.41847HepG2GTF2F1
chr23658326536583326+5'-UTR3.883968.93039HepG2HNRNPM
chr23658328336583409+5'-UTR3.6527738.94985HepG2DDX3X
chr23658322136583265+5'-UTR3.3720512.30789HepG2EIF3H
chr23658328536583359+5'-UTR3.661318.68281HepG2DHX30
chr23658316436583248+5'-UTR3.1154012.74376HepG2SDAD1
chr23658320936583298+5'-UTR3.9155122.89630HepG2RPS3
chr23658307836583123+5'-UTR3.8639838.90087HepG2DDX3X
chr23658329836583400+5'-UTR4.5321220.29778HepG2RPS3
chr23666975836669827+CDS3.882609.66778HepG2PPIG
chr23674065236740748+CDS,intron-Proximal3.1760710.45192HepG2BUD13
chr23670406836704204+CDS3.4412025.68683HepG2BCLAF1
chr23658343836583522+CDS3.265778.70244HepG2SDAD1
chr23673946936739528+CDS3.439935.86107HepG2PPIG
chr23670407936704157+CDS3.260667.33264HepG2GRWD1
chr23669167636691792+CDS,intron-Proximal4.377408.88184HepG2LIN28B
chr23673727236737279+CDS3.411824.85828HepG2BCLAF1
chr23662375636623819+CDS,intron-Distal,intron-Proximal3.6163610.83723HepG2PPIG
chr23670408036704163+CDS5.0428633.83404HepG2LIN28B
chr23666860736668642+CDS5.130355.99789HepG2RPS3
chr23674069736740752+CDS,intron-Proximal3.268326.92117HepG2SND1
chr23670416136704211+CDS4.466169.41951HepG2PPIG
chr23676466236764722+CDS,intron-Proximal4.9425911.17766HepG2PRPF8
chr23658349336583559+CDS3.3839030.44381HepG2DDX3X
chr23662375836623876+CDS,intron-Distal3.5520521.80090HepG2BCLAF1
chr23674939136749452+CDS3.396927.91657HepG2PPIG
chr23677162236771676+CDS,intron-Proximal4.309485.05356HepG2PRPF8
chr23674932736749352+CDS3.406387.01246HepG2BCLAF1
chr23672646036726487+CDS4.405357.09561HepG2BCLAF1
chr23658344736583542+CDS3.103137.67315HepG2RPS3
chr23670416336704205+CDS3.281364.27261HepG2GRWD1
chr23672636436726416+CDS4.6377514.21310HepG2BCLAF1
chr23666840136668462+CDS3.667205.64032HepG2EIF3H
chr23670417136704241+CDS,intron-Proximal3.870909.00124HepG2PRPF8
chr23674463436744743+CDS,intron-Proximal3.6165616.55493HepG2PRPF8
chr23674088736740945+CDS,intron-Proximal3.162804.46036HepG2PRPF8
chr23662391536623964+CDS,intron-Distal,intron-Proximal5.072514.35676HepG2PRPF8
chr23658358636583628+CDS3.114344.86573HepG2EIF3H
chr23666858636668636+CDS4.640318.40228HepG2PPIG
chr23677156736771630+CDS3.398139.00189HepG2BCLAF1
chr23658971436589772+intron-Distal4.000127.48149HepG2XPO5
chr23659054136590598+intron-Distal4.7100912.28772HepG2QKI
chr23660417336604251+intron-Distal3.865803.17235HepG2HNRNPK
chr23658411336584166+intron-Distal4.056584.51896HepG2XPO5
chr23667274836672788+intron-Distal4.299464.61447HepG2SUGP2
chr23660426636604314+intron-Distal3.495804.92676HepG2XPO5
chr23672923236729324+intron-Distal3.350004.09021HepG2HNRNPL
chr23672352436723627+intron-Distal4.406525.61812HepG2CSTF2
chr23667356136673600+intron-Distal4.506985.04879HepG2SUGP2
chr23660088836600940+intron-Distal3.264104.04583HepG2XPO5
chr23675456136754623+intron-Distal4.8708020.47576HepG2QKI
chr23664451636644598+intron-Distal4.600526.08171HepG2QKI
chr23672149836721545+intron-Distal4.385093.50357HepG2QKI
chr23660626436606359+intron-Distal,intron-Proximal3.388539.57775HepG2U2AF2
chr23659615436596243+intron-Distal4.8367520.88239HepG2QKI
chr23673586936735962+intron-Distal3.638835.32632HepG2QKI
chr23676233136762439+intron-Distal3.423985.89725HepG2FAM120A
chr23664440936644472+intron-Distal5.391505.07733HepG2PTBP1
chr23668295636683047+intron-Distal3.116773.63033HepG2HNRNPU
chr23662394336623990+intron-Distal,intron-Proximal4.788306.84364HepG2TIAL1
chr23676233136762440+intron-Distal5.176127.82868HepG2PRPF4
chr23672217436722279+intron-Distal4.214334.17759HepG2QKI
chr23667015636670199+intron-Distal3.392574.08528HepG2SUGP2
chr23667369836673739+intron-Distal4.403765.31529HepG2SUGP2
chr23668146436681540+intron-Distal3.3430410.79740HepG2HNRNPL
chr23674639536746463+intron-Distal5.8155010.69221HepG2XPO5
chr23661612136616229+intron-Distal3.737003.04956HepG2HNRNPL
chr23663906136639177+intron-Distal6.2633722.24894HepG2CSTF2
chr23673330136733371+intron-Distal3.192976.61683HepG2HNRNPL
chr23664462936644685+intron-Distal3.744263.30286HepG2PTBP1
chr23676187936761947+intron-Distal4.179414.41148HepG2GTF2F1
chr23667096136670995+intron-Distal3.881213.54208HepG2SUGP2
chr23658463836584683+intron-Distal4.733665.37406HepG2HNRNPM
chr23660645036606518+intron-Distal5.015737.22648HepG2CSTF2
chr23663887436638948+intron-Distal3.181093.10946HepG2SFPQ
chr23675018936750281+intron-Distal5.2962510.05440HepG2UPF1
chr23659048236590541+intron-Distal4.1155815.99770HepG2QKI
chr23674810336748160+intron-Distal4.151343.97018HepG2HNRNPM
chr23660637136606450+intron-Distal6.2929220.21891HepG2CSTF2
chr23662448236624537+intron-Distal3.151453.76460HepG2HNRNPL
chr23666682836666907+intron-Distal3.220203.27276HepG2HNRNPL
chr23666701836667099+intron-Distal3.269433.28644HepG2QKI
chr23662749636627624+intron-Distal3.109823.12015HepG2SAFB
chr23659066636590809+intron-Distal3.781526.07399HepG2SFPQ
chr23658396936584028+intron-Distal3.884768.18836HepG2NKRF
chr23672158436721637+intron-Distal3.673493.10834HepG2CSTF2
chr23673337136733439+intron-Distal4.6673011.19329HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CRIM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CRIM1 is not available on ENCORE database.

  • 100 RBPs can affect the levels of CRIM1.  








The Knockdown/knockout RNA-Seq assay for CRIM1 is not available on ENCORE database.





100 RBPs can affect the gene expression of CRIM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CRIM1ENSG00000150938.5827.527303034.50470-1.8746049.9061047.15200HepG2ABCF1
CRIM1ENSG00000150938.53895.913502678.583300.540409.282108.30100HepG2ACO1
CRIM1ENSG00000150938.55470.803204428.619700.304801.967101.50890HepG2AKAP1
CRIM1ENSG00000150938.51865.648202738.63100-0.553807.456205.26940HepG2ATP5C1
CRIM1ENSG00000150938.51888.103602537.09470-0.426203.285002.26550HepG2BCCIP
CRIM1ENSG00000150938.52543.095003481.31660-0.453004.537503.56040HepG2CIRBP
CRIM1ENSG00000150938.53451.051902536.349000.444203.411902.65630HepG2CPSF6
CRIM1ENSG00000150938.53014.856602499.179800.270502.503601.45320HepG2CPSF7
CRIM1ENSG00000150938.52132.640901567.051300.444504.358503.04060HepG2CSTF2
CRIM1ENSG00000150938.51997.227102671.43880-0.419602.679301.35460HepG2CSTF2T
CRIM1ENSG00000150938.58167.047703956.185501.0456052.2181050.15050HepG2CELF1
CRIM1ENSG00000150938.51843.778502477.41280-0.426209.615308.24010HepG2DDX19B
CRIM1ENSG00000150938.51982.351602918.51560-0.5580011.697009.57460HepG2DDX1
CRIM1ENSG00000150938.51172.424701889.59800-0.688608.781406.51880HepG2DDX28
CRIM1ENSG00000150938.53420.202404242.17600-0.310702.271801.70000HepG2DDX3X
CRIM1ENSG00000150938.51978.480202494.52540-0.334402.262401.55650HepG2DDX55
CRIM1ENSG00000150938.51702.976002797.76180-0.7162010.588708.76170HepG2DDX5
CRIM1ENSG00000150938.54494.830403644.368100.302501.909701.38750HepG2DDX6
CRIM1ENSG00000150938.52098.082202760.17130-0.395704.209703.01220HepG2DHX30
CRIM1ENSG00000150938.5992.584302562.73860-1.3684064.8324062.71910HepG2DKC1
CRIM1ENSG00000150938.52490.315502836.38210-0.187702.709802.06340HepG2DNAJC2
CRIM1ENSG00000150938.52586.879103222.04720-0.316802.473601.59950HepG2EEF2
CRIM1ENSG00000150938.52064.475502686.01010-0.379703.307302.09210HepG2EFTUD2
CRIM1ENSG00000150938.52185.557702718.61070-0.314903.342102.17050HepG2EIF3G
CRIM1ENSG00000150938.51909.511503871.29420-1.0196015.7873014.27390HepG2EIF4A3
CRIM1ENSG00000150938.55117.492503769.478500.441002.946002.23740HepG2EIF4B
CRIM1ENSG00000150938.53095.405604196.70440-0.439109.976708.58040HepG2EIF4G1
CRIM1ENSG00000150938.51865.602502628.77490-0.494705.561704.06110HepG2ESF1
CRIM1ENSG00000150938.51375.367402617.66120-0.9285020.8756018.76740HepG2EWSR1
CRIM1ENSG00000150938.53142.141302337.714200.426504.608203.06660HepG2FAM120A
CRIM1ENSG00000150938.53933.545202743.471200.519707.659705.93560HepG2FASTKD2
CRIM1ENSG00000150938.55749.623103064.161200.9079014.2847012.75690HepG2FIP1L1
CRIM1ENSG00000150938.53050.507202082.101700.550908.133706.82260HepG2FUBP3
CRIM1ENSG00000150938.55441.893203623.509900.586606.507205.51010HepG2G3BP1
CRIM1ENSG00000150938.51730.229502328.80550-0.428604.145503.03780HepG2GEMIN5
CRIM1ENSG00000150938.53962.150802768.555200.517106.028904.50540HepG2GNB2L1
CRIM1ENSG00000150938.52070.443802875.44200-0.473802.165601.59550HepG2GPKOW
CRIM1ENSG00000150938.54160.954302557.421500.7021024.1155021.72530HepG2HDGF
CRIM1ENSG00000150938.53387.909303909.42870-0.206602.593701.68580HepG2HNRNPA2B1
CRIM1ENSG00000150938.52332.346803213.67070-0.462405.672104.70770HepG2HNRNPC
CRIM1ENSG00000150938.52499.024702847.34870-0.188302.073201.44650HepG2HNRNPF
CRIM1ENSG00000150938.54593.770403669.580300.324002.948702.22870HepG2HNRNPK
CRIM1ENSG00000150938.51983.910603192.42750-0.6863022.3726020.76880HepG2HNRNPU
CRIM1ENSG00000150938.52063.471202803.82640-0.442306.241805.19810HepG2IGF2BP1
CRIM1ENSG00000150938.52840.008503683.15030-0.375003.154102.43910HepG2IGF2BP2
CRIM1ENSG00000150938.53650.145103260.967500.162602.515901.81290HepG2ILF2
CRIM1ENSG00000150938.53901.968305121.94720-0.392502.702901.52640HepG2KHDRBS1
CRIM1ENSG00000150938.53875.405805458.18480-0.494103.909702.91850HepG2LARP4
CRIM1ENSG00000150938.51734.909903907.70400-1.1715023.3842021.58890HepG2MAGOH
CRIM1ENSG00000150938.54160.007102480.107000.7461015.6472013.90160HepG2MSI2
CRIM1ENSG00000150938.51520.768802797.94550-0.879604.449903.19960HepG2MTPAP
CRIM1ENSG00000150938.53232.779702082.513200.6343010.509408.19030HepG2NAA15
CRIM1ENSG00000150938.56974.594004218.128700.7254020.4041018.45610HepG2NOL12
CRIM1ENSG00000150938.56028.388203581.657800.7510010.796009.39240HepG2PABPC4
CRIM1ENSG00000150938.54371.895903160.018800.4682011.416109.88820HepG2PARN
CRIM1ENSG00000150938.53300.259402847.398900.212802.263501.59000HepG2PPIL4
CRIM1ENSG00000150938.52453.902103549.69370-0.532603.477002.12430HepG2PRPF6
CRIM1ENSG00000150938.51440.769004026.57310-1.4827052.5982050.41210HepG2PUF60
CRIM1ENSG00000150938.56248.291804271.262900.5487011.302309.99700HepG2PUM2
CRIM1ENSG00000150938.57038.218103999.474200.8153026.5476024.90400HepG2QKI
CRIM1ENSG00000150938.54752.333503488.688700.445907.436906.12640HepG2RBM15
CRIM1ENSG00000150938.52879.001304527.53220-0.6532017.3087016.23940HepG2RBM22
CRIM1ENSG00000150938.55457.288203629.844800.5882010.860809.58700HepG2RBM25
CRIM1ENSG00000150938.53964.038003270.271900.277502.444601.51810HepG2RBM27
CRIM1ENSG00000150938.51843.969703067.28060-0.7341012.7526011.47680HepG2RPLP0
CRIM1ENSG00000150938.52409.630903200.79450-0.409602.234201.38330HepG2RPS10
CRIM1ENSG00000150938.51652.612202545.08890-0.6230010.142009.05380HepG2RPS19
CRIM1ENSG00000150938.52594.486105397.55260-1.0569014.1746012.42170HepG2RPS3A
CRIM1ENSG00000150938.54194.699103078.735000.446104.920703.47610HepG2RPS5
CRIM1ENSG00000150938.55726.557503544.984900.691805.556903.41820HepG2RTF1
CRIM1ENSG00000150938.52290.585902843.02710-0.311705.777304.89920HepG2SAFB2
CRIM1ENSG00000150938.51513.321602377.51680-0.651705.341304.38710HepG2SF3A3
CRIM1ENSG00000150938.51785.355102716.24700-0.605402.685001.98990HepG2SF3B1
CRIM1ENSG00000150938.53271.606503844.77950-0.232903.249602.61540HepG2SF3B4
CRIM1ENSG00000150938.52403.335503315.49940-0.4642014.9128013.60220HepG2SMN1
CRIM1ENSG00000150938.56401.689403022.240501.0827012.9360011.26230HepG2SNRNP70
CRIM1ENSG00000150938.56884.402205113.738800.4289013.6616012.77410HepG2SRFBP1
CRIM1ENSG00000150938.53420.329004013.17640-0.230603.549303.03020HepG2SRSF1
CRIM1ENSG00000150938.54853.000303975.654400.287605.142904.33030HepG2SRSF5
CRIM1ENSG00000150938.52324.830102797.42330-0.267003.765902.97230HepG2SRSF7
CRIM1ENSG00000150938.54332.639303264.983500.4081010.108209.16940HepG2SRSF9
CRIM1ENSG00000150938.53066.504604440.03690-0.5340015.7312014.71410HepG2SSB
CRIM1ENSG00000150938.54255.541303045.216200.482702.995801.74010HepG2SUB1
CRIM1ENSG00000150938.58196.517703607.363001.1840060.4015058.20690HepG2TAF15
CRIM1ENSG00000150938.53895.778702673.833500.542905.566404.59140HepG2TARDBP
CRIM1ENSG00000150938.52161.223504301.37060-0.992906.243604.71290HepG2TBRG4
CRIM1ENSG00000150938.51240.346501664.37610-0.424203.204402.13680HepG2TFIP11
CRIM1ENSG00000150938.55468.848503314.501600.7223016.7052014.70610HepG2TIA1
CRIM1ENSG00000150938.51912.573003102.22600-0.6978015.4605014.44950HepG2TIAL1
CRIM1ENSG00000150938.55091.845403271.841900.638005.278103.29140HepG2TRA2A
CRIM1ENSG00000150938.52665.011203129.75780-0.231903.152202.55920HepG2TRIM56
CRIM1ENSG00000150938.54781.208303933.791400.281402.983102.07130HepG2TUFM
CRIM1ENSG00000150938.52103.629902621.29060-0.317402.494601.89620HepG2U2AF1
CRIM1ENSG00000150938.52804.116802108.499000.411208.896507.76420HepG2UPF1
CRIM1ENSG00000150938.51212.019902273.72110-0.907609.173607.30630HepG2UPF2
CRIM1ENSG00000150938.51139.629102444.44870-1.1009020.7377018.84180HepG2XRN2
CRIM1ENSG00000150938.51971.889302499.74050-0.342206.710305.73910HepG2ZC3H8
CRIM1ENSG00000150938.51328.730302318.93810-0.8034025.6984024.45670HepG2ZNF622
CRIM1ENSG00000150938.517.808302.148003.051403.021702.27540K562EIF2S2
CRIM1ENSG00000150938.514.740800.0000099999.999904.177902.58020K562STAU1
CRIM1ENSG00000150938.57.924000.0000099999.999902.450201.78190K562TARDBP
CRIM1ENSG00000150938.514.989802.378802.655602.419101.62040K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CRIM1 is not available on ENCORE database.





7 RBPs can affect the splicing of CRIM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECRIM1ENSG00000150938.5chr2+366237563662393036583068365837663666840036668643-0.136000.005220.07860excludedHepG2U2AF1
SECRIM1ENSG00000150938.5chr2+366237563662393036583068365837663666840036668643-0.203000.000100.01436excludedHepG2PRPF8
SECRIM1ENSG00000150938.5chr2+3676449436764689367492343674945636771518367716410.054000.004120.08292includedHepG2HNRNPK
SECRIM1ENSG00000150938.5chr2+367644943676468936749234367494563677151836771641-0.103000.000110.01391excludedHepG2TBRG4
SECRIM1ENSG00000150938.5chr2+3676449436764689367492343674945636771518367716410.181000.000020.00047includedHepG2U2AF2
SECRIM1ENSG00000150938.5chr2+3676449436764689367492343674945636771518367716410.157000.000260.01662includedHepG2SFPQ
SECRIM1ENSG00000150938.5chr2+3676449436764689367492343674945636771518367716410.061000.000520.07698includedHepG2RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CRIM1 is not avaliable on ENCORE database.