USP15

General Information

Gene Name       : USP15
Gene ID             : ENSG00000135655.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USP15)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878USP15ENSG00000135655.1572.9959.3166.15ENCSR000AEF
HepG2USP15ENSG00000135655.1517.6623.4520.55ENCSR985KAT
K562USP15ENSG00000135655.15109.57119.33114.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
USP1566310S1Submitted, ENCORE2BGHcLV43-59, Submitted, ENCORE2BGKcLV42-99, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
USP15K562CRISPRUSP15-BGKcLV42-99,USP15-BGKcLV42-100NT-BGKcLV42-1,NT-BGKcLV42-290.5,91.8SequencedENCORE2
USP15HepG2CRISPRUSP15-BGHcLV43-59,USP15-BGHcLV43-60NT-BGHcLV43-1,NT-BGHcLV43-284.3,88.4SequencedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
USP15Product_ID: 66310S
Lot_ID: 1
Source: Cell Signaling Technology
Target Name: USP15-human		 USP15-HEPG2-CRISPR-66310S.png<br>Caption: Western blot following CRISPR against USP15 in HepG2 whole cell lysate using USP15 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against USP15. USP15 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 CST_66310S_1_USP15.png<br>Caption: IP-WB analysis of 66310S whole cell lysate using the USP15 specific antibody, 66310S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the USP15-specific antibody, 66310S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 USP15-K562-CRISPR-66310S.png<br>Caption: Western blot following CRISPR against USP15 in K562 whole cell lysate using USP15 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against USP15. USP15 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for USP15 is not avaliable on ENCORE database.



Proteins bound to RNA
  • USP15 RNA is bound by 38 proteins.  







eCLIP assay for USP15 is not avaliable on ENCORE database.





38 proteins are bound to USP15 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr126272940062729434+3'-UTR,intron-Distal3.859443.19904K562TIA1
chr126279938062799471+3'-UTR,intron-Distal3.600845.78824K562FAM120A
chr126273014362730206+3'-UTR,intron-Distal4.406195.54754K562IGF2BP1
chr126272928962729360+3'-UTR,intron-Distal4.489795.66560K562TIA1
chr126271965962719723+3'-UTR,CDS,intron-Distal,intron-Proximal3.214183.87268K562SRSF1
chr126272904162729125+3'-UTR,intron-Distal3.408243.57974K562IGF2BP1
chr126273016062730260+3'-UTR,intron-Distal3.293525.68494K562MATR3
chr126269961162699648+5'-UTR,intron-Distal4.779663.53569K562LIN28B
chr126268795962688088+5'-UTR,CDS,intron-Proximal3.128848.67313K562ZNF800
chr126265419062654290+5'-UTR,CDS,intron-Proximal4.325095.11007HepG2GRWD1
chr126265416262654283+5'-UTR,CDS3.656077.68150HepG2NCBP2
chr126265416962654284+5'-UTR,CDS3.195514.92351K562DDX3X
chr126268799962688088+5'-UTR,CDS,intron-Proximal3.958218.08603HepG2BCLAF1
chr126270856262708619+5'-UTR,CDS,intron-Proximal3.428144.84256K562U2AF2
chr126265416962654299+5'-UTR,CDS,intron-Proximal3.937433.41051HepG2SRSF1
chr126268791062687999+5'-UTR,CDS,intron-Proximal3.377535.53463K562SF3B4
chr126270857062708585+5'-UTR,CDS,intron-Proximal3.142436.73967K562ZNF622
chr126269969862699782+5'-UTR,intron-Distal3.1983414.55001K562AQR
chr126271539462715457+CDS,intron-Proximal3.220306.46022K562KHSRP
chr126265421462654245+CDS3.215636.34926K562SRSF1
chr126278464062784760+CDS,intron-Proximal3.622937.17964K562ZNF800
chr126274916162749246+CDS3.203635.94265K562GRWD1
chr126277784462777907+CDS,intron-Proximal4.5118416.61815K562U2AF2
chr126278564262785708+CDS,intron-Proximal3.412885.20150K562GPKOW
chr126265423262654271+CDS3.3887217.16618K562UCHL5
chr126271524762715331+CDS5.102546.71715HepG2BCLAF1
chr126274914262749227+CDS3.023627.54748K562YBX3
chr126274923762749257+CDS,intron-Proximal3.427168.15127K562ZNF622
chr126274919662749258+CDS,intron-Proximal4.728304.34038HepG2BCLAF1
chr126271521262715273+CDS,intron-Proximal3.326789.20570K562SF3B4
chr126270864662708733+CDS,intron-Proximal3.2256810.44194K562GPKOW
chr126277784362777905+CDS,intron-Proximal4.484863.77802HepG2U2AF2
chr126269656762696605+CDS,intron-Proximal3.830516.77282K562SRSF1
chr126271524362715329+CDS,intron-Proximal3.3664521.17927K562ZNF622
chr126265420062654232+CDS3.011737.04888K562UCHL5
chr126278558262785638+CDS,intron-Proximal3.863383.56057K562U2AF2
chr126274299362743075+CDS,intron-Distal,intron-Proximal3.105669.08033K562SF3B4
chr126277538662775517+CDS,intron-Proximal3.192768.38944K562PRPF8
chr126278468162784760+CDS,intron-Proximal3.7774713.49775K562DDX24
chr126277770762777790+CDS,intron-Proximal4.062415.94293HepG2BCLAF1
chr126274924262749305+CDS,intron-Proximal3.003015.78875K562PRPF8
chr126265426962654285+CDS,intron-Proximal3.1158217.05410K562ZNF622
chr126278566462785680+CDS,intron-Proximal4.136865.83621K562AQR
chr126278470962784755+CDS3.4075313.36473K562ZNF622
chr126269661462696660+CDS3.3229915.73719K562ZNF622
chr126278682662786864+CDS,intron-Proximal3.706654.47780K562GPKOW
chr126278471962784759+CDS3.291073.27569HepG2BCLAF1
chr126269666762696703+CDS,intron-Proximal3.1510910.55732K562ZNF622
chr126278514362785197+CDS3.081609.72347K562ZNF622
chr126268804662688089+CDS,intron-Proximal3.7616917.02803K562UCHL5
chr126274299862743036+CDS,intron-Distal,intron-Proximal5.8401315.59486K562U2AF2
chr126274299462743041+CDS,intron-Distal,intron-Proximal3.630065.86162K562U2AF1
chr126271532962715383+CDS3.3554314.24825K562ZNF622
chr126278374262783769+CDS,intron-Proximal3.653326.36421K562ZNF622
chr126278344062783498+CDS,intron-Proximal3.884434.58287K562PRPF8
chr126278612762786169+CDS,intron-Proximal3.655447.86459K562RBM15
chr126270867662708697+CDS3.222768.95936K562ZNF622
chr126277762162777664+CDS4.121204.72754K562YBX3
chr126278499762785038+CDS3.437067.06500K562UCHL5
chr126278693362786967+CDS4.081606.14226K562ZNF622
chr126278464362784706+CDS,intron-Proximal3.438445.45876HepG2BCLAF1
chr126265427162654285+CDS,intron-Proximal3.8634312.81756K562UCHL5
chr126278687862786923+CDS3.872824.93978HepG2BCLAF1
chr126274925562749276+CDS,intron-Proximal3.153073.93669K562AQR
chr126277781462777894+CDS,intron-Proximal4.0754227.75893K562SF3B4
chr126278368662783736+CDS4.1115710.03782K562ZNF622
chr126277784062777895+CDS,intron-Proximal4.087686.38018K562U2AF1
chr126277531962775370+CDS3.810053.68471HepG2BCLAF1
chr126278562062785675+CDS,intron-Proximal4.650996.37031K562RBM15
chr126269656862696607+CDS,intron-Proximal3.5417512.48866K562DDX24
chr126277775962777774+CDS3.269644.00731K562UCHL5
chr126268804162688088+CDS,intron-Proximal3.7121117.65634K562DDX24
chr126278499062785053+CDS3.4919311.06731K562ZNF622
chr126277781562777892+CDS,intron-Proximal3.9810820.89143K562EFTUD2
chr126269656762696697+CDS,intron-Proximal4.8193611.47391HepG2BCLAF1
chr126278359562783675+CDS5.246158.32277K562LIN28B
chr126278494362784990+CDS3.7312410.58978K562ZNF622
chr126273532562735380+intron-Distal3.694095.54542K562HNRNPM
chr126271546362715578+intron-Distal,intron-Proximal3.566964.00685K562TIA1
chr126270887862708937+intron-Distal3.609526.57673K562KHSRP
chr126273258062732595+intron-Distal3.988766.71166K562EXOSC5
chr126271973362719805+intron-Distal,intron-Proximal5.021294.86719K562RBM22
chr126272000262720064+intron-Distal3.541629.06665K562KHSRP
chr126268815162688197+intron-Distal,intron-Proximal5.265428.94695K562KHSRP
chr126279231562792386+intron-Distal3.815379.83956K562KHSRP
chr126278573762785790+intron-Distal,intron-Proximal3.187806.06633K562KHSRP
chr126268296662683040+intron-Distal4.149468.30916K562HNRNPM
chr126273339262733424+intron-Distal4.815356.73731K562EXOSC5
chr126273949962739560+intron-Distal3.343814.70733K562HNRNPL
chr126273283462732917+intron-Distal4.031847.54819K562HNRNPM
chr126268778062687865+intron-Distal,intron-Proximal3.307644.56724K562KHSRP
chr126273786562737947+intron-Distal4.115394.24993K562HNRNPL
chr126270895062708996+intron-Distal3.148103.73266K562KHSRP
chr126268573962685818+intron-Distal3.319995.57520K562EXOSC5
chr126268363662683680+intron-Distal4.1250513.54595K562EXOSC5
chr126268476062684841+intron-Distal3.224423.32889K562MATR3
chr126278544262785491+intron-Distal3.152836.28168K562KHSRP
chr126271994362720002+intron-Distal3.7104514.70992K562KHSRP
chr126268153862681576+intron-Distal3.901748.78192K562EXOSC5
chr126274235562742425+intron-Distal4.3335610.28391K562KHSRP
chr126273620562736236+intron-Distal4.4030213.67834K562EXOSC5
chr126276148562761546+intron-Distal3.189233.09339K562MATR3
chr126270875562708803+intron-Distal,intron-Proximal4.135683.12843K562PRPF8
chr126268283562682905+intron-Distal6.1195031.68398K562EXOSC5
chr126267080062670873+intron-Distal3.240766.04536K562KHSRP
chr126268264962682683+intron-Distal5.4166819.73896K562EXOSC5
chr126268250062682538+intron-Distal4.6008311.25934K562EXOSC5
chr126277880262778923+intron-Distal5.6735229.58246K562QKI
chr126273431462734344+intron-Distal3.185783.56409K562MATR3
chr126276200562762066+intron-Distal3.696276.13002K562EXOSC5
chr126273266462732749+intron-Distal3.022344.26172K562MATR3
chr126273427662734303+intron-Distal3.448126.95020K562MATR3
chr126278549162785507+intron-Distal,intron-Proximal3.542234.10408K562KHSRP
chr126273420462734245+intron-Distal3.598773.98203K562MATR3
chr126273571462735769+intron-Distal5.400328.03988K562EXOSC5
chr126271807962718125+intron-Distal3.220307.55882K562KHSRP
chr126268349862683556+intron-Distal3.272383.68431K562TARDBP
chr126271816762718192+intron-Distal3.005534.99341K562KHSRP
chr126269741562697471+intron-Distal3.096704.13566K562KHDRBS1
chr126269677262696841+intron-Distal,intron-Proximal4.130367.05160K562PRPF8
chr126273530462735373+intron-Distal3.870517.91188K562MATR3
chr126271174362711783+intron-Distal3.856813.66668K562KHSRP
chr126273209762732121+intron-Distal5.182278.04096K562EXOSC5
chr126266853062668697+intron-Distal3.457658.04915K562KHDRBS1
chr126268317062683204+intron-Distal4.265964.03833K562HNRNPM
chr126273404762734093+intron-Distal5.164778.36716K562EXOSC5
chr126268268362682723+intron-Distal6.0807617.32358K562EXOSC5
chr126273444562734538+intron-Distal4.7532810.19483K562MATR3
chr126273277562732823+intron-Distal5.3962419.40963K562EXOSC5
chr126279415162794253+intron-Distal3.906583.82544K562HNRNPL
chr126265442062654516+intron-Distal3.346053.72904K562EXOSC5
chr126274074262740800+intron-Distal3.179075.78064K562KHSRP
chr126279121362791278+intron-Distal4.091998.11145K562KHSRP
chr126271625962716394+intron-Distal3.722787.91188K562MATR3
chr126274425862744314+intron-Distal3.858703.69885K562KHDRBS1
chr126279238662792467+intron-Distal3.617406.85960K562KHSRP
chr126268255062682607+intron-Distal4.8903814.17115K562EXOSC5
chr126273600462736040+intron-Distal4.825735.76606K562EXOSC5
chr126276149262761563+intron-Distal4.607849.69330K562EXOSC5
chr126279216862792224+intron-Distal3.654147.71234K562KHSRP
chr126273285162732927+intron-Distal3.786305.47496K562MATR3
chr126273618962736205+intron-Distal3.6668310.98514K562EXOSC5
chr126275701962757218+intron-Distal4.1463612.38111K562HNRNPL
chr126273450962734538+intron-Distal5.203188.03988K562EXOSC5
chr126274309262743134+intron-Distal,intron-Proximal4.060864.49024K562AQR
chr126268949762689552+intron-Distal3.922083.06411K562KHDRBS1
chr126268284262682906+intron-Distal4.9833620.70631K562HNRNPM
chr126273474762734763+intron-Distal4.933247.38793K562EXOSC5
chr126273194862732004+intron-Distal5.9752716.32087K562EXOSC5
chr126278658662786635+intron-Distal3.683694.10408K562KHSRP
chr126276092862761002+intron-Distal5.8457414.65278K562EXOSC5
chr126271822162718278+intron-Distal3.529755.38829K562KHSRP
chr126273450062734548+intron-Distal4.468494.78076K562HNRNPM
chr126273229062732337+intron-Distal4.178853.47525K562MATR3
chr126274231662742355+intron-Distal4.465085.19823K562KHSRP
chr126268438662684478+intron-Distal3.720306.25598K562KHSRP
chr126268405962684096+intron-Distal5.6078411.00067K562EXOSC5
chr126271989362719912+intron-Distal3.217619.23785K562KHSRP
chr126268386862683888+intron-Distal5.068458.36716K562EXOSC5
chr126273638362736445+intron-Distal5.088977.02715K562MATR3
chr126273506162735095+intron-Distal5.036477.38793K562EXOSC5
chr126271548562715559+intron-Distal,intron-Proximal4.8578622.68271K562PTBP1
chr126265474462654795+intron-Distal4.081477.75103K562HNRNPM
chr126279050662790566+intron-Distal5.3708811.51466K562KHSRP
chr126273270462732756+intron-Distal5.8560827.35239K562EXOSC5
chr126274080062740835+intron-Distal5.1607410.05887K562KHSRP
chr126268348062683547+intron-Distal5.009485.14653K562EIF4G2
chr126273566362735742+intron-Distal3.488553.89977K562MATR3
chr126269596762696058+intron-Distal3.170303.68839K562KHSRP
chr126275209862752179+intron-Distal3.338823.93901K562KHSRP
chr126273423262734293+intron-Distal4.6626216.70120K562EXOSC5
chr126268826362688336+intron-Distal4.006135.98773K562KHSRP
chr126267501662675107+intron-Distal5.554059.44534K562PTBP1
chr126268336962683400+intron-Distal5.3694710.34009K562EXOSC5
chr126265617362656276+intron-Distal3.322713.51693K562KHDRBS1
chr126270880662708878+intron-Distal5.2913515.54337K562KHSRP
chr126273291562732934+intron-Distal3.825738.78073K562EXOSC5
chr126276237862762424+intron-Distal4.566604.80466K562EXOSC5
chr126268290562682990+intron-Distal6.5364724.03439K562EXOSC5
chr126275985162759934+intron-Distal4.2924516.34185K562EXOSC5
chr126268213962682190+intron-Distal6.0184527.02343K562EXOSC5
chr126268940262689497+intron-Distal3.297203.90716K562KHDRBS1
chr126273500362735032+intron-Distal5.196277.71416K562EXOSC5
chr126273287962732915+intron-Distal4.9628612.22458K562EXOSC5
chr126271232862712490+intron-Distal3.918469.61755K562MATR3
chr126273598762736050+intron-Distal4.536803.72005K562MATR3
chr126279026862790320+intron-Distal,intron-Proximal3.131913.07751K562KHSRP
chr126271974062719797+intron-Distal,intron-Proximal3.220738.93979K562EFTUD2
chr126277886562778943+intron-Distal4.862635.11295K562U2AF2
chr126265434762654589+intron-Distal,intron-Proximal3.635774.24981K562MATR3
chr126268274562682771+intron-Distal5.186978.36716K562EXOSC5
chr126278533062785410+intron-Distal3.342027.68575K562KHSRP
chr126277696362777079+intron-Distal3.364144.25660K562HNRNPL
chr126277875162778789+intron-Distal4.218803.50357HepG2QKI
chr126271974362719826+intron-Distal,intron-Proximal3.4076110.36480K562PRPF8
chr126274299462742998+intron-Distal,intron-Proximal5.6583913.68678K562U2AF2
chr126268558362685656+intron-Distal5.240975.58025K562HNRNPM
chr126273569962735765+intron-Distal3.645638.48883K562HNRNPM
chr126270822262708250+intron-Distal3.770073.02234K562KHSRP
chr126268268162682735+intron-Distal5.077278.41046K562HNRNPM
chr126269858262698624+intron-Distal3.964544.49024K562AQR
chr126278132362781376+intron-Distal3.371983.73364K562SAFB2
chr126271630762716383+intron-Distal3.330325.29274K562PTBP1
chr126273377662733826+intron-Distal4.772156.35761K562HNRNPM
chr126273214562732172+intron-Distal3.476323.43829K562EXOSC5
chr126273446162734509+intron-Distal5.3192617.76358K562EXOSC5
chr126268348862683544+intron-Distal5.7364626.68744K562EXOSC5
chr126273635762736432+intron-Distal3.9493113.56495K562EXOSC5
chr126268307262683113+intron-Distal4.243267.01277K562EXOSC5
chr126268237262682472+intron-Distal6.7377424.70740K562EXOSC5
chr126273740562737550+intron-Distal3.776035.62061K562HNRNPK
chr126273333862733353+intron-Distal4.155043.30696K562EXOSC5
chr126268952062689617+intron-Distal3.925804.07784K562SAFB2
chr126273424562734276+intron-Distal3.820749.48716K562MATR3
chr126270827662708348+intron-Distal4.077097.99418K562KHSRP
chr126266748362667591+intron-Distal3.632326.81104K562TARDBP
chr126277875062778802+intron-Distal5.233569.72850K562QKI
chr126265431562654408+intron-Distal,intron-Proximal3.644316.38859K562EFTUD2
chr126273409362734147+intron-Distal4.8779012.22629K562EXOSC5
chr126273629262736330+intron-Distal4.812746.41216K562EXOSC5
chr126268306662683121+intron-Distal4.658905.04868K562HNRNPM
chr126274083562740899+intron-Distal5.6349331.22187K562KHSRP
chr126274089962740942+intron-Distal3.600914.13620K562KHSRP
chr126277508662775130+intron-Distal3.237273.73266K562KHSRP
chr126276082262760919+intron-Distal5.384937.88580K562HNRNPM
chr126277720462777368+intron-Distal4.911717.67538K562HNRNPL
chr126273616862736233+intron-Distal3.081584.12287K562MATR3
chr126276447762764616+intron-Distal4.133843.50357HepG2QKI
chr126278401162784129+intron-Distal4.211799.40001K562KHSRP
chr126273516062735177+intron-Distal4.465794.80399K562EXOSC5
chr126268299362683051+intron-Distal6.3039920.00565K562EXOSC5
chr126273591062735987+intron-Distal4.990816.01663K562MATR3
chr126268327662683316+intron-Distal4.249737.31365K562EXOSC5
chr126271974162719795+intron-Distal,intron-Proximal4.1927715.18902K562KHSRP
chr126279061962790713+intron-Distal3.077105.17344K562HNRNPL
chr126273403562734110+intron-Distal4.5719911.19912K562MATR3
chr126277885762778930+intron-Distal3.450383.80334HepG2U2AF2
chr126277877962778920+intron-Distal4.649304.84906K562U2AF1
chr126271979562719855+intron-Distal,intron-Proximal4.2300719.49264K562KHSRP
chr126270161362701710+intron-Distal3.767035.35441K562HNRNPL
chr126276504162765107+intron-Distal4.640084.30178K562PTBP1
chr126269070262690820+intron-Distal3.567224.70071K562SAFB2
chr126271654362716623+intron-Distal3.001624.74790K562RBFOX2
chr126271219362712328+intron-Distal5.5747712.95819K562MATR3
chr126279115162791213+intron-Distal4.416056.13339K562KHSRP
chr126276086262760917+intron-Distal4.545078.80920K562EXOSC5
chr126268162762681659+intron-Distal3.334844.74379K562EXOSC5
chr126269670662696824+intron-Distal,intron-Proximal6.3797215.90046K562AQR
chr126277864462778746+intron-Distal3.7180718.39147K562KHSRP
chr126273283562732879+intron-Distal4.9897810.29529K562EXOSC5
chr126275911062759156+intron-Distal4.957257.06134K562EXOSC5
chr126277884062778916+intron-Distal5.009055.20135HepG2QKI
chr126271986662719893+intron-Distal3.580147.21887K562KHSRP
chr126268326662683322+intron-Distal3.093893.18966K562MATR3
chr126273531162735373+intron-Distal5.5601218.42033K562EXOSC5
chr126273462862734677+intron-Distal6.3130619.66775K562EXOSC5
chr126273531762735379+intron-Distal4.224053.79098HepG2SUGP2
chr126273230562732345+intron-Distal5.8038312.65719K562EXOSC5
chr126268497962685066+intron-Distal4.209553.47525K562MATR3
chr126265431362654379+intron-Proximal5.274306.13333K562RBM22
chr126278568062785744+intron-Proximal3.598678.65113K562AQR
chr126270871062708743+intron-Proximal4.860599.04436K562AQR
chr126278571162785755+intron-Proximal4.751116.15361K562PRPF8
chr126278619862786251+intron-Proximal3.935263.01046K562RBM22
chr126278621362786253+intron-Proximal4.413883.12843K562PRPF8
chr126278569462785745+intron-Proximal4.066785.91788K562RBM22
chr126274927662749297+intron-Proximal4.292565.97994K562AQR
chr126270851262708561+intron-Proximal4.499786.27552K562KHSRP
chr126268813162688151+intron-Proximal4.378578.75493K562KHSRP
chr126265428462654339+intron-Proximal3.358795.46476K562AQR
chr126270872762708779+intron-Proximal4.698304.44893K562RBM22
chr126278700162787069+intron-Proximal5.050576.13333K562RBM22
chr126277815562778182+intron-Proximal3.504294.91684K562CSTF2T
chr126270869762708738+intron-Proximal4.064383.49003K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for USP15 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USP15 is not available on ENCORE database.

  • 90 RBPs can affect the levels of USP15.  








The Knockdown/knockout RNA-Seq assay for USP15 is not available on ENCORE database.





90 RBPs can affect the gene expression of USP15 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USP15ENSG00000135655.9756.41720543.749400.476105.646604.83980HepG2ACO1
USP15ENSG00000135655.91322.75600786.340000.750207.136806.32670HepG2AKAP1
USP15ENSG00000135655.9911.61070617.441300.562006.337205.23190HepG2CALR
USP15ENSG00000135655.9659.63580543.704500.278702.218101.61240HepG2CKAP4
USP15ENSG00000135655.9366.99190539.37730-0.555503.535802.28970HepG2CPSF7
USP15ENSG00000135655.9651.16490464.830300.486203.562502.80030HepG2DDX21
USP15ENSG00000135655.9978.29130753.319500.376901.971601.43520HepG2DDX3X
USP15ENSG00000135655.9740.24360582.759200.345002.020301.34870HepG2DDX55
USP15ENSG00000135655.9318.02340443.22760-0.478904.186803.41580HepG2DNAJC2
USP15ENSG00000135655.9374.03860622.09410-0.733904.571103.81950HepG2EIF2S1
USP15ENSG00000135655.9577.10740438.902000.394802.657401.59820HepG2EIF3G
USP15ENSG00000135655.91147.83590750.577200.612709.644808.26510HepG2EIF4G1
USP15ENSG00000135655.9462.91070719.01350-0.635305.725304.57440HepG2EIF4G2
USP15ENSG00000135655.9418.07840306.284100.448802.550201.79440HepG2FUBP3
USP15ENSG00000135655.9354.72380693.49680-0.967208.124806.98620HepG2FXR1
USP15ENSG00000135655.9342.45780451.50810-0.398802.165301.58800HepG2HNRNPA1
USP15ENSG00000135655.9581.11130748.24800-0.364703.281402.50490HepG2HNRNPF
USP15ENSG00000135655.9314.57250498.88440-0.665307.100506.16480HepG2HNRNPU
USP15ENSG00000135655.9569.99070736.81210-0.370402.687001.97320HepG2IGF2BP1
USP15ENSG00000135655.9418.54020509.59660-0.284001.952501.32340HepG2ILF2
USP15ENSG00000135655.91234.27250697.657000.823003.623202.90970HepG2MATR3
USP15ENSG00000135655.9772.60430552.047000.484802.467501.48520HepG2PCBP2
USP15ENSG00000135655.9764.36120635.391800.266502.108701.61900HepG2PTBP1
USP15ENSG00000135655.91077.00740532.752301.015407.429006.30590HepG2RAVER1
USP15ENSG00000135655.91128.12360905.287500.317402.830002.30730HepG2RBM22
USP15ENSG00000135655.9510.92630360.504700.503003.505602.82250HepG2RPS19
USP15ENSG00000135655.9680.86660541.873400.329302.002801.31390HepG2RPS2
USP15ENSG00000135655.9673.36530444.895200.597804.487103.51370HepG2RRP9
USP15ENSG00000135655.9329.76450444.28790-0.430103.241202.55450HepG2SAFB2
USP15ENSG00000135655.91218.79020667.963600.867507.936606.75330HepG2SF3A3
USP15ENSG00000135655.91301.72310963.405700.434102.127101.44460HepG2SNRNP70
USP15ENSG00000135655.91449.963801022.487500.503808.725407.97270HepG2SRFBP1
USP15ENSG00000135655.91440.45500690.507201.0607029.9332028.74410HepG2SRSF1
USP15ENSG00000135655.9604.77180735.12420-0.281602.141801.52050HepG2SRSF7
USP15ENSG00000135655.91103.91540887.758900.314302.082501.62130HepG2SSB
USP15ENSG00000135655.9614.20950484.818400.341202.209401.75240HepG2TIAL1
USP15ENSG00000135655.9383.78490489.08900-0.349802.602102.05160HepG2TRIM56
USP15ENSG00000135655.9933.36420565.659700.722403.171402.50130HepG2U2AF1
USP15ENSG00000135655.9473.33460592.38140-0.323702.511501.84060HepG2UPF1
USP15ENSG00000135655.9289.52130531.40470-0.876104.806503.46690HepG2UPF2
USP15ENSG00000135655.9788.43690571.921300.463105.042904.27470HepG2UTP3
USP15ENSG00000135655.9866.39480585.873000.564303.372802.20080HepG2XRCC6
USP15ENSG00000135655.9717.15010494.306500.536806.691305.72160HepG2ZC3H8
USP15ENSG00000135655.9945.75590651.506400.537608.742307.91020HepG2ZNF622
USP15ENSG00000135655.98438.091106771.138800.317407.319606.46110K562AGGF1
USP15ENSG00000135655.94981.189504244.555100.230802.982101.41560K562AKAP1
USP15ENSG00000135655.98440.703607045.720600.260502.491001.87100K562AKAP8L
USP15ENSG00000135655.97111.642508311.32660-0.224902.016601.50030K562AQR
USP15ENSG00000135655.93991.032704974.39060-0.317805.038103.16660K562BCCIP
USP15ENSG00000135655.94224.651104806.87480-0.186302.474101.56950K562BCLAF1
USP15ENSG00000135655.96444.242208061.49030-0.323005.824604.17430K562CPEB4
USP15ENSG00000135655.915376.8435013038.390100.237903.060802.03680K562CELF1
USP15ENSG00000135655.911226.203508341.583600.4284011.7253010.48440K562DDX47
USP15ENSG00000135655.98766.157007581.425700.209402.895301.99780K562DKC1
USP15ENSG00000135655.93657.017704724.27100-0.369407.225405.22140K562EIF2S1
USP15ENSG00000135655.94233.392506281.48880-0.569309.353308.15010K562EIF2S2
USP15ENSG00000135655.95033.632503973.340300.341105.368904.27520K562EIF3G
USP15ENSG00000135655.93076.167604493.41520-0.546707.884206.49940K562EIF4A3
USP15ENSG00000135655.98994.5651010604.61440-0.237603.162702.16070K562EIF4G2
USP15ENSG00000135655.95139.747806782.07650-0.400002.317001.54070K562FIP1L1
USP15ENSG00000135655.94290.513506592.76810-0.619704.546503.44720K562FMR1
USP15ENSG00000135655.94280.652103512.793100.285103.310501.82910K562FUS
USP15ENSG00000135655.93246.093804672.96960-0.5256012.6763011.47620K562FXR1
USP15ENSG00000135655.97209.559605079.730800.505104.013503.12240K562G3BP2
USP15ENSG00000135655.96521.493208371.36150-0.360303.468902.62480K562GRSF1
USP15ENSG00000135655.96687.324005197.036900.363604.095602.78970K562HNRNPA1
USP15ENSG00000135655.93311.890104290.10580-0.373404.556303.80880K562HNRNPC
USP15ENSG00000135655.92250.435503830.95650-0.7675015.5862012.87410K562HNRNPF
USP15ENSG00000135655.97343.299905246.152100.485105.468303.67330K562HNRNPK
USP15ENSG00000135655.94009.892205755.10320-0.5213011.532709.73230K562HNRNPU
USP15ENSG00000135655.96892.749809195.73490-0.415902.370101.63000K562HSPD1
USP15ENSG00000135655.99821.958907477.117200.393404.467803.38320K562KIF1C
USP15ENSG00000135655.93431.327304350.90280-0.342502.750001.30370K562LIN28B
USP15ENSG00000135655.93015.012803825.16040-0.343403.809201.93670K562LSM11
USP15ENSG00000135655.93988.028005519.91500-0.469006.679905.34690K562MAGOH
USP15ENSG00000135655.94314.815306039.29640-0.485103.379802.40820K562METAP2
USP15ENSG00000135655.94685.878605286.99510-0.174102.455301.69280K562MTPAP
USP15ENSG00000135655.99317.881305871.180000.666306.079704.57920K562NAA15
USP15ENSG00000135655.96594.070705874.446400.166603.502202.67230K562NSUN2
USP15ENSG00000135655.95665.936207698.29990-0.442202.668801.86620K562PPIG
USP15ENSG00000135655.92671.836903846.49770-0.525707.045505.48560K562PSIP1
USP15ENSG00000135655.93431.611405362.82970-0.6441013.0389011.65470K562PTBP1
USP15ENSG00000135655.99015.9421012058.53210-0.419509.260007.48540K562PUM2
USP15ENSG00000135655.911868.437306987.109300.7643014.8370013.61990K562PUS1
USP15ENSG00000135655.99455.836006808.144100.4738010.684009.54330K562RBM15
USP15ENSG00000135655.93756.907805143.14240-0.453105.505304.27140K562RBM22
USP15ENSG00000135655.94112.046405412.14080-0.396303.871202.55130K562NELFE
USP15ENSG00000135655.94563.966803913.455000.221703.621601.81490K562RPS10
USP15ENSG00000135655.94470.260005924.76410-0.406404.155802.90160K562RPS3
USP15ENSG00000135655.94818.219403355.733700.521803.532901.75560K562SERBP1
USP15ENSG00000135655.94769.968407723.53180-0.695303.160101.73180K562SFPQ
USP15ENSG00000135655.92632.523103326.71820-0.337703.208402.08320K562SRFBP1
USP15ENSG00000135655.96855.981405938.521600.207204.008602.90330K562SRPK2
USP15ENSG00000135655.97684.321605257.190700.5475010.367409.01380K562SRSF1
USP15ENSG00000135655.94535.149705720.27570-0.334904.004902.70470K562SRSF4
USP15ENSG00000135655.92950.584303797.04210-0.363902.732101.72170K562SUPV3L1
USP15ENSG00000135655.94687.896503956.764800.244502.562601.77470K562SYNCRIP
USP15ENSG00000135655.93594.236705320.98700-0.566007.448406.22380K562TARDBP
USP15ENSG00000135655.94157.949905132.59640-0.303803.499702.56330K562TIA1
USP15ENSG00000135655.96161.421804923.997800.323302.314901.32670K562U2AF1
USP15ENSG00000135655.97409.895305085.389200.5430010.889509.28700K562U2AF2
USP15ENSG00000135655.96254.819805329.794900.230802.123501.35810K562WDR3
USP15ENSG00000135655.98095.664705542.261700.5466021.6930019.66980K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USP15 is not available on ENCORE database.





31 RBPs can affect the splicing of USP15 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUSP15ENSG00000135655.9chr12+6274300162743088627196526271971462749111627492560.126000.000280.00750includedK562SRSF1
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.105000.000000.00000excludedK562SRSF1
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.122000.004100.06356excludedK562SF3B4
SEUSP15ENSG00000135655.9chr12+627833846278347962783210627832946278357662783768-0.144000.000000.00000excludedK562SF3B4
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.060000.000820.03222excludedK562PRPF8
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.187000.000290.01402excludedK562PRPF8
SEUSP15ENSG00000135655.9chr12+6276817062768316627492086274925662775270627754440.107000.000380.07553includedK562WDR3
SEUSP15ENSG00000135655.9chr12+6276817062768316627492086274925662775270627754440.140000.000090.00475includedK562AKAP8L
SEUSP15ENSG00000135655.9chr12+626997006269983962696570626967016270857062708697-0.062000.000000.00000excludedK562AKAP8L
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.097000.000020.00397excludedK562XRCC6
SEUSP15ENSG00000135655.9chr12+6274300162743088627196526271971462749111627492560.203000.003900.04349includedHepG2U2AF2
SEUSP15ENSG00000135655.9chr12+6276817062768316627490476274925662775270627753610.053000.000990.01210includedK562AQR
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.173000.000020.00041excludedK562AQR
SEUSP15ENSG00000135655.9chr12+627833846278347962783210627832946278357662783768-0.197000.000000.00000excludedK562AQR
SEUSP15ENSG00000135655.9chr12+627900746279017862786832627869826279496662795055-0.094000.000000.00000excludedK562AQR
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.133000.000000.00000excludedK562FXR1
SEUSP15ENSG00000135655.9chr12+6276817062768316627492086274925662775270627754440.100000.000060.01907includedK562HNRNPA1
SEUSP15ENSG00000135655.9chr12+6274300162743088627196526271971462749111627492560.255000.000350.05605includedK562DROSHA
SEUSP15ENSG00000135655.9chr12+626997006269983962696570626967016270857062708697-0.076000.000000.00000excludedK562PUS1
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.163000.000020.00065excludedK562PUS1
SEUSP15ENSG00000135655.9chr12+6274300162743088627196526271971462749111627492560.242000.002230.08122includedHepG2SFPQ
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.372000.001810.09110excludedHepG2FTO
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.264000.000010.00122excludedK562EFTUD2
SEUSP15ENSG00000135655.9chr12+6274300162743088627196526271971462749111627492560.299000.000030.01053includedHepG2HNRNPUL1
SEUSP15ENSG00000135655.9chr12+6278321062783294627778586277808362783576627836530.229000.000200.04892includedK562FXR2
SEUSP15ENSG00000135655.9chr12+626997006269983962696570626967016270857062708697-0.057000.000000.00000excludedK562UTP18
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.149000.000380.01640excludedK562UTP18
SEUSP15ENSG00000135655.9chr12+627430016274308862719652627197146274911162749256-0.223000.000000.00001excludedK562U2AF2
SEUSP15ENSG00000135655.9chr12+627833846278347962783210627832946278357662783768-0.055000.000000.00021excludedK562U2AF2
SEUSP15ENSG00000135655.9chr12+6276817062768316627492086274925662775270627754440.102000.003520.07027includedK562RBM15
SEUSP15ENSG00000135655.9chr12+626997006269983962696570626967016270857062708697-0.065000.000000.00000excludedK562RBM15
SEUSP15ENSG00000135655.9chr12+626997006269983962696570626967016270857062708697-0.062000.000000.00000excludedK562AGGF1
SEUSP15ENSG00000135655.9chr12+627833846278347962783210627832946278357662783768-0.073000.000000.00009excludedK562SF3B1
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.093000.000000.00018excludedK562HNRNPK
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.108000.000000.00000excludedK562EIF3G
SEUSP15ENSG00000135655.9chr12+627681706276831662749208627492566277527062775444-0.089000.000040.00310excludedK562PTBP1
SEUSP15ENSG00000135655.9chr12+627430016274308862715244627153906274911162749256-0.097000.000140.03286excludedK562NPM1
A3SSUSP15ENSG00000135655.9chr12+6278356262783768627835766278376862783384627834790.080000.004460.08769longerHepG2U2AF2
A3SSUSP15ENSG00000135655.9chr12+627860516278624662786208627862466278559562785666-0.149000.000230.06313shorterK562HNRNPUL1
A3SSUSP15ENSG00000135655.9chr12+6278603562786167627860516278616762785595627856660.099000.000000.00000longerK562AQR
RIUSP15ENSG00000135655.9chr12+6278341362783653627834136278347962783562627836530.579000.002570.03846includedK562SF3B4
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.133000.000010.00023includedK562SF3B4
RIUSP15ENSG00000135655.9chr12+6278341362783653627834136278347962783562627836530.426000.000240.00202includedK562PUS1
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.318000.000000.00000includedK562PUS1
RIUSP15ENSG00000135655.9chr12+6278342262783653627834226278347962783576627836530.090000.004370.04537includedHepG2SF3A3
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.069000.000160.02300includedK562NSUN2
RIUSP15ENSG00000135655.9chr12+6278341362783653627834136278347962783576627836530.084000.000040.00060includedHepG2U2AF2
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.154000.008060.05039includedHepG2U2AF2
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.057000.000560.03874includedK562NPM1
RIUSP15ENSG00000135655.9chr12+6278341362783653627834136278347962783562627836530.501000.000000.00011includedK562AGGF1
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.142000.000000.00000includedK562AGGF1
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.197000.000000.00000includedK562BUD13
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.168000.000000.00000includedK562AKAP8L
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.101000.000000.00101includedK562WDR3
RIUSP15ENSG00000135655.9chr12+6278341362783653627834136278347962783562627836530.560000.000000.00001includedK562RBM15
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.137000.000000.00000includedK562RBM15
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.053000.000290.02258includedK562SBDS
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.243000.004630.06202includedHepG2SRSF9
RIUSP15ENSG00000135655.9chr12+6278341362783653627834136278347962783562627836530.376000.002900.03434includedK562UTP18
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.216000.000000.00000includedK562UTP18
RIUSP15ENSG00000135655.9chr12+6277762062778083627776206277777962777858627780830.073000.000000.00000includedK562AQR
MXEUSP15ENSG00000135655.9chr12+62719652627197146274300162743088627152446271539062749111627492560.080000.001700.047241includedK562RBM15
MXEUSP15ENSG00000135655.9chr12+6271965262719714627430016274308862715244627153906274911162749256-0.151000.000210.006122includedK562DROSHA
MXEUSP15ENSG00000135655.9chr12+62719652627197146274300162743088627152446271539062749111627492560.086000.000600.013761includedK562PUS1
MXEUSP15ENSG00000135655.9chr12+6274300162743088627491116274925662719652627197146277527062775444-0.116000.001080.021492includedK562PUS1
MXEUSP15ENSG00000135655.9chr12+6269975162699839627060666270609062696570626967016270857062708697-0.114000.007210.090302includedK562PUS1
MXEUSP15ENSG00000135655.9chr12+62715244627153906271965262719714627085706270869762743001627430880.151000.000000.000011includedK562HNRNPA1
MXEUSP15ENSG00000135655.9chr12+62719652627197146274300162743088627152446271539062749111627492560.095000.000020.008741includedK562HNRNPA1
MXEUSP15ENSG00000135655.9chr12+62719612627197146274300162743088627152446271539062749111627492560.162000.000130.001551includedK562AQR
MXEUSP15ENSG00000135655.9chr12+62719652627197146274300162743088627152446271539062749111627492560.076000.003040.023661includedK562AQR
MXEUSP15ENSG00000135655.9chr12+62719659627197146274300162743088627152446271539062749111627492560.160000.000170.001931includedK562AQR
MXEUSP15ENSG00000135655.9chr12+62719567627197146274300162743088627152446271539062749111627492560.154000.000240.002611includedK562AQR
MXEUSP15ENSG00000135655.9chr12+62785572627856666278605162786167627849366278520962786832627869820.054000.000000.000001includedK562AQR
MXEUSP15ENSG00000135655.9chr12+62719612627197146274300162743088627152446271539062749111627492560.214000.000000.000031includedK562U2AF2
MXEUSP15ENSG00000135655.9chr12+62784936627852096278559562785666627846436278475962786051627861670.071000.007640.076671includedK562U2AF2
MXEUSP15ENSG00000135655.9chr12+62719652627197146274300162743088627152446271539062749111627492560.111000.000000.000131includedK562U2AF2
MXEUSP15ENSG00000135655.9chr12+6271965262719714627430016274308862715244627153906274911162749256-0.116000.000450.051622includedK562XRCC6
MXEUSP15ENSG00000135655.9chr12+6276817062768316627748886277500062749208627492566277527062775444-0.103000.000060.020682includedK562EIF4G2
MXEUSP15ENSG00000135655.9chr12+6276817062768316627749036277500062749208627492566277527062775444-0.088000.000320.064362includedK562EIF4G2
MXEUSP15ENSG00000135655.9chr12+6276817062768316627749156277500062749208627492566277527062775444-0.133000.000020.010422includedK562EIF4G2
MXEUSP15ENSG00000135655.9chr12+6269975162699839627060666270609062696570626967016270857062708697-0.136000.003080.090002includedK562AKAP8L
MXEUSP15ENSG00000135655.9chr12+6269970062699839627060666270609062696570626967016270857062708697-0.131000.002960.087552includedK562AKAP8L
MXEUSP15ENSG00000135655.9chr12+6278559562785666627860516278616762784936627852096278683262786982-0.169000.004150.057182includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for USP15 is not avaliable on ENCORE database.