UBN2

General Information

Gene Name       : UBN2
Gene ID             : ENSG00000157741.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UBN2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBN2ENSG00000157741.142.652.422.54ENCSR000AEF
HepG2UBN2ENSG00000157741.142.404.113.25ENCSR985KAT
K562UBN2ENSG00000157741.145.626.656.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBN2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • UBN2 RNA is bound by 31 proteins.  







eCLIP assay for UBN2 is not avaliable on ENCORE database.





31 proteins are bound to UBN2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7138992276138992347+3'-UTR5.3249711.32025K562TARDBP
chr7138992279138992353+3'-UTR3.229223.37451K562APOBEC3C
chr7138960839138960907+3'-UTR,CDS,intron-Proximal4.022247.58784HepG2BCLAF1
chr7138960871138960897+3'-UTR,CDS,intron-Proximal3.407784.89070K562UCHL5
chr7138992082138992218+3'-UTR4.099483.28485K562CPSF6
chr7138992177138992229+3'-UTR4.0905311.96832K562PUM2
chr7138987491138987558+3'-UTR3.058933.60923HepG2HNRNPL
chr7138989247138989323+3'-UTR3.555297.68044K562TARDBP
chr7138991843138991914+3'-UTR4.151454.51080HepG2HNRNPL
chr7138985092138985161+3'-UTR3.8391010.38566K562PUM2
chr7138992285138992396+3'-UTR3.194718.28086K562DDX55
chr7138982654138982686+3'-UTR3.797623.07287K562TIA1
chr7138989460138989529+3'-UTR4.4448816.43974K562TARDBP
chr7138921773138921845+5'-UTR,CDS,intron-Proximal3.365744.19763K562DDX24
chr7138916209138916265+5'-UTR,CDS,intron-Distal3.272133.59602K562UCHL5
chr7138921769138921845+5'-UTR,CDS,intron-Proximal3.090676.89640K562UCHL5
chr7138921775138921848+5'-UTR,CDS,intron-Proximal3.6863910.43407K562ZNF622
chr7138921770138921841+5'-UTR,CDS4.344367.09561HepG2BCLAF1
chr7138946156138946229+CDS3.188418.41511K562ZNF622
chr7138958742138958820+CDS3.866233.22245K562GRWD1
chr7138969204138969255+CDS3.360017.83156K562ZNF622
chr7138958761138958785+CDS3.878118.70187K562ZNF622
chr7138978638138978729+CDS,intron-Proximal3.860573.51789K562IGF2BP2
chr7138957105138957186+CDS4.924595.70640HepG2BCLAF1
chr7138968454138968506+CDS3.463305.39086K562UCHL5
chr7138958042138958158+CDS,intron-Proximal4.3005215.21824K562UCHL5
chr7138936698138936753+CDS,intron-Proximal3.999908.84023K562ZNF622
chr7138944007138944108+CDS,intron-Proximal3.616364.47780K562GPKOW
chr7138969051138969084+CDS3.240403.54074K562RBM15
chr7138978716138978811+CDS,intron-Proximal3.752914.58287K562PRPF8
chr7138936698138936741+CDS,intron-Proximal4.593114.78529HepG2BCLAF1
chr7138958684138958753+CDS3.834999.45155K562UCHL5
chr7138960842138960854+CDS,intron-Proximal3.333623.02345K562ZNF622
chr7138967857138967895+CDS3.508335.58962K562RBM15
chr7138943233138943277+CDS,intron-Proximal3.837625.06180HepG2BCLAF1
chr7138968780138968856+CDS3.517117.04350HepG2PCBP2
chr7138946002138946119+CDS3.477654.22460K562RBM15
chr7138968521138968562+CDS3.726574.76274K562UCHL5
chr7138967972138968035+CDS4.0266513.35322K562RBM15
chr7138969264138969317+CDS3.380178.65547K562ZNF622
chr7138946047138946235+CDS3.917547.80656HepG2GRWD1
chr7138958757138958816+CDS5.176485.34688K562DDX24
chr7138946395138946478+CDS3.883453.14999HepG2GRWD1
chr7138960854138960894+CDS,intron-Proximal3.397185.53307K562ZNF622
chr7138946207138946251+CDS3.728303.68471HepG2BCLAF1
chr7138944036138944089+CDS5.261627.39496HepG2BCLAF1
chr7138967929138967972+CDS4.0696514.01720K562RBM15
chr7138954176138954238+CDS4.442357.53358HepG2BCLAF1
chr7138944022138944118+CDS,intron-Proximal3.537304.06415K562TRA2A
chr7138946237138946409+CDS3.291286.79439K562RBM15
chr7138945996138946092+CDS,intron-Proximal3.272139.12920K562UCHL5
chr7138944009138944115+CDS,intron-Proximal3.209827.67473K562ZNF800
chr7138958676138958684+CDS,intron-Proximal3.476063.95937K562UCHL5
chr7138958044138958158+CDS,intron-Proximal3.6990015.02015K562ZNF622
chr7138967963138968010+CDS3.518823.61820HepG2HLTF
chr7138968799138968870+CDS3.750504.02740K562PCBP1
chr7138964063138964111+CDS,intron-Proximal3.257164.34695HepG2BCLAF1
chr7138968876138968980+CDS3.608447.19958K562IGF2BP1
chr7138944089138944117+CDS,intron-Proximal4.720394.70478HepG2BCLAF1
chr7138968134138968182+CDS3.830746.37184K562RBM15
chr7138969136138969185+CDS3.233824.86973K562UCHL5
chr7138944021138944095+CDS3.371477.15230K562UCHL5
chr7138960842138960894+CDS,intron-Proximal3.791043.56019HepG2GRWD1
chr7138969264138969360+CDS,intron-Proximal3.788994.45914HepG2PRPF8
chr7138958738138958820+CDS3.568545.80880HepG2GRWD1
chr7138958042138958155+CDS,intron-Proximal3.659937.65986K562ZNF800
chr7138943229138943333+CDS,intron-Proximal3.105928.58389K562DDX24
chr7138964054138964117+CDS,intron-Proximal3.993206.86590K562SF3B4
chr7138957067138957105+CDS,intron-Proximal3.469145.15500HepG2BCLAF1
chr7138958785138958819+CDS3.505598.21285K562ZNF622
chr7138944095138944117+CDS,intron-Proximal4.013065.08388K562UCHL5
chr7138944022138944103+CDS4.011415.74135K562DDX24
chr7138968791138968856+CDS3.640114.54958K562IGF2BP2
chr7138936708138936743+CDS3.801233.25205K562GRWD1
chr7138954238138954274+CDS,intron-Proximal3.359826.20035HepG2BCLAF1
chr7138936701138936740+CDS,intron-Proximal3.744234.40383K562UCHL5
chr7138958042138958160+CDS,intron-Proximal5.6301110.24913HepG2BCLAF1
chr7138943277138943368+CDS4.415548.80935HepG2BCLAF1
chr7138945996138946046+CDS,intron-Proximal5.367439.10017HepG2BCLAF1
chr7138957139138957188+CDS,intron-Proximal4.018066.68017K562UCHL5
chr7138958679138958756+CDS5.7400111.17302HepG2BCLAF1
chr7138936753138936801+CDS3.119915.44868K562ZNF622
chr7138936741138936807+CDS,intron-Proximal3.583558.25092HepG2BCLAF1
chr7138916590138916695+CDS,intron-Distal4.222284.35343K562SRSF1
chr7138968882138968989+CDS4.119873.06084HepG2HNRNPK
chr7138946046138946176+CDS4.2934715.25564HepG2BCLAF1
chr7138960865138960893+CDS3.891563.67607K562YBX3
chr7138978713138978763+CDS,intron-Proximal3.743035.06115HepG2PRPF8
chr7138924903138925055+intron-Distal4.353694.79477K562KHSRP
chr7138966194138966296+intron-Distal3.506236.58258HepG2PCBP2
chr7138971313138971370+intron-Distal3.950013.66668K562KHSRP
chr7138916126138916209+intron-Distal3.731777.85262K562UCHL5
chr7138916054138916219+intron-Distal3.151208.61034K562BUD13
chr7138972293138972373+intron-Distal3.996283.30440HepG2QKI
chr7138916063138916112+intron-Distal3.936204.49723K562ZNF800
chr7138915991138916087+intron-Distal4.292063.71264HepG2FXR2
chr7138976549138976598+intron-Distal4.682174.15474K562XRCC6
chr7138933752138933842+intron-Distal3.372235.52832K562TARDBP
chr7138970213138970258+intron-Distal3.359183.68294K562PUM2
chr7138969332138969456+intron-Distal,intron-Proximal4.2849913.80525K562KHSRP
chr7138954307138954458+intron-Distal,intron-Proximal4.318503.66668K562KHSRP
chr7138921873138921976+intron-Distal,intron-Proximal4.100917.05160K562PRPF8
chr7138916059138916126+intron-Distal4.266437.23632K562UCHL5
chr7138964005138964054+intron-Proximal5.522646.90654K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBN2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBN2 is not available on ENCORE database.

  • 106 RBPs can affect the levels of UBN2.  








The Knockdown/knockout RNA-Seq assay for UBN2 is not available on ENCORE database.





106 RBPs can affect the gene expression of UBN2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBN2ENSG00000157741.101000.078401166.03840-0.221502.090801.54770HepG2ACO1
UBN2ENSG00000157741.10589.65950824.67210-0.483902.591801.68670HepG2BCCIP
UBN2ENSG00000157741.101114.94950886.782800.330201.972501.31320HepG2CIRBP
UBN2ENSG00000157741.10904.848501165.76080-0.365505.021204.17410HepG2CKAP4
UBN2ENSG00000157741.10734.308701097.06120-0.579208.615507.60160HepG2CELF1
UBN2ENSG00000157741.10922.418601179.64490-0.354904.824403.88580HepG2DAZAP1
UBN2ENSG00000157741.10842.389401078.40730-0.356304.675303.62810HepG2DDX19B
UBN2ENSG00000157741.101081.24550849.293300.348302.775701.86060HepG2DDX24
UBN2ENSG00000157741.101426.463701080.609800.400502.850802.21590HepG2DDX3X
UBN2ENSG00000157741.10531.54120810.79670-0.609203.935003.02830HepG2DDX55
UBN2ENSG00000157741.101824.284001209.939700.592302.724301.75430HepG2DDX59
UBN2ENSG00000157741.10626.96890809.29100-0.368304.102703.33960HepG2DNAJC2
UBN2ENSG00000157741.10694.89980899.05520-0.371602.237001.40680HepG2EEF2
UBN2ENSG00000157741.101346.75830986.165400.449503.218502.53000HepG2EIF4A3
UBN2ENSG00000157741.101338.67170960.175000.479302.082401.48160HepG2EIF4B
UBN2ENSG00000157741.102083.590701588.415700.391403.479602.81730HepG2ETF1
UBN2ENSG00000157741.101903.513901067.330600.834602.241501.33650HepG2FTO
UBN2ENSG00000157741.101012.32500548.036300.885204.056303.11160HepG2FUBP3
UBN2ENSG00000157741.101389.46780979.899500.503704.424803.28680HepG2G3BP2
UBN2ENSG00000157741.10434.71190649.86040-0.580104.459503.31270HepG2GEMIN5
UBN2ENSG00000157741.101027.532401415.32510-0.461902.601501.52590HepG2GRSF1
UBN2ENSG00000157741.10938.768001324.36450-0.496503.142701.52860HepG2HNRNPD
UBN2ENSG00000157741.101130.35970875.884200.367904.250003.38260HepG2HNRNPF
UBN2ENSG00000157741.101497.140401152.613900.377202.854102.21590HepG2HNRNPLL
UBN2ENSG00000157741.10654.18460920.16380-0.492202.184601.33930HepG2HNRNPM
UBN2ENSG00000157741.101211.64810862.495400.490305.538204.55140HepG2IGF2BP1
UBN2ENSG00000157741.101180.20110938.219100.330902.022501.43620HepG2IGF2BP2
UBN2ENSG00000157741.101035.449701456.61420-0.492403.445702.08930HepG2KHDRBS1
UBN2ENSG00000157741.101306.87940943.690600.469602.912501.88000HepG2KHSRP
UBN2ENSG00000157741.10785.820201065.89030-0.439806.634605.09230HepG2KIF1C
UBN2ENSG00000157741.101086.600801575.95030-0.536402.108501.39140HepG2LARP4
UBN2ENSG00000157741.101237.56600995.354300.314101.895501.34730HepG2MAGOH
UBN2ENSG00000157741.10782.045901000.92400-0.356001.981401.44280HepG2MATR3
UBN2ENSG00000157741.101483.178701024.500400.533704.591203.78640HepG2NCBP2
UBN2ENSG00000157741.10968.829601169.73160-0.271902.279701.58770HepG2NOL12
UBN2ENSG00000157741.101595.094201022.031000.642107.569906.37340HepG2NSUN2
UBN2ENSG00000157741.101298.60010912.379900.509204.219303.33920HepG2PABPC4
UBN2ENSG00000157741.101216.77880916.830900.408205.100804.08540HepG2PRPF4
UBN2ENSG00000157741.10907.460101185.31040-0.385405.579104.79820HepG2PUM1
UBN2ENSG00000157741.10995.564801187.68220-0.254602.597101.99480HepG2PUS1
UBN2ENSG00000157741.101523.76840947.918400.6847011.8884010.72640HepG2QKI
UBN2ENSG00000157741.101612.468601327.608100.280302.636202.12760HepG2RBM22
UBN2ENSG00000157741.101621.24150860.323500.9140011.221909.92360HepG2RBM25
UBN2ENSG00000157741.101205.85090974.115200.307803.197102.62410HepG2NELFE
UBN2ENSG00000157741.101365.10840907.305700.5893010.604109.51740HepG2RECQL
UBN2ENSG00000157741.10431.67070710.16180-0.718207.495806.54410HepG2RPS19
UBN2ENSG00000157741.101043.543701535.04970-0.556803.929302.97690HepG2RPS3A
UBN2ENSG00000157741.10852.16330618.875300.461403.149802.31850HepG2RRP9
UBN2ENSG00000157741.101551.059001140.845400.443104.060803.22050HepG2SF3B1
UBN2ENSG00000157741.101138.71100911.257700.321403.372802.72840HepG2SF3B4
UBN2ENSG00000157741.101331.043501070.623500.314003.448002.67920HepG2SLBP
UBN2ENSG00000157741.10734.86960945.86070-0.364102.869702.21570HepG2SMN1
UBN2ENSG00000157741.103200.250401499.460601.0936053.8208052.34210HepG2SRFBP1
UBN2ENSG00000157741.101631.48500951.179900.7783017.3928016.42210HepG2SRSF1
UBN2ENSG00000157741.101778.005101227.595200.534303.992902.76690HepG2SRSF3
UBN2ENSG00000157741.101057.84710860.529100.297702.812602.11070HepG2SRSF7
UBN2ENSG00000157741.101359.06910773.856400.8124020.7566019.50220HepG2SRSF9
UBN2ENSG00000157741.101619.056601301.845100.314504.065203.46890HepG2SSB
UBN2ENSG00000157741.101805.42640855.024701.0782016.9490015.72890HepG2TAF15
UBN2ENSG00000157741.101284.09850785.580000.7088011.138209.49370HepG2TIA1
UBN2ENSG00000157741.10579.35010892.92990-0.624109.723308.76420HepG2TRIM56
UBN2ENSG00000157741.101383.661901140.759800.278402.047501.49820HepG2U2AF1
UBN2ENSG00000157741.101237.935201451.92080-0.230002.464601.89220HepG2UTP3
UBN2ENSG00000157741.101008.858501374.93320-0.446602.645301.57960HepG2XPO5
UBN2ENSG00000157741.10484.57020794.57770-0.713505.742704.71140HepG2XRN2
UBN2ENSG00000157741.101071.22890904.833000.243402.279801.66260HepG2ZC3H8
UBN2ENSG00000157741.102433.575103698.98590-0.6041017.6988016.38570K562AGGF1
UBN2ENSG00000157741.103032.361904064.57780-0.422704.674303.31680K562AKAP8
UBN2ENSG00000157741.102434.300503848.95060-0.6610010.948309.53290K562AKAP8L
UBN2ENSG00000157741.106042.307802981.022201.0192024.2876022.74080K562AQR
UBN2ENSG00000157741.102904.704204038.45310-0.475409.075807.29970K562ATP5C1
UBN2ENSG00000157741.103262.498602435.619000.421604.173603.09510K562BOP1
UBN2ENSG00000157741.103336.501604420.52990-0.405905.901204.14430K562CCDC124
UBN2ENSG00000157741.104754.942303406.979100.480802.522401.51750K562CNOT7
UBN2ENSG00000157741.106183.533704903.348100.334602.878401.88510K562CELF1
UBN2ENSG00000157741.103241.543404141.82140-0.353605.785804.46130K562DKC1
UBN2ENSG00000157741.102493.213701776.318200.489004.158102.86040K562EIF3D
UBN2ENSG00000157741.101440.124501914.61700-0.410903.142302.29620K562EIF3G
UBN2ENSG00000157741.102496.548101891.839100.400004.152703.14820K562EIF4A3
UBN2ENSG00000157741.105008.227003988.374400.328406.240404.84610K562EIF4G2
UBN2ENSG00000157741.101754.747202703.75620-0.623705.038503.86900K562FIP1L1
UBN2ENSG00000157741.101805.119001356.604700.412003.315002.06060K562FKBP4
UBN2ENSG00000157741.103287.647602635.184100.319102.695601.85290K562FMR1
UBN2ENSG00000157741.102768.840702233.705300.309702.206501.39460K562FTO
UBN2ENSG00000157741.101719.397802251.15670-0.388803.767402.06490K562G3BP1
UBN2ENSG00000157741.103122.578201950.480800.678806.355805.18720K562G3BP2
UBN2ENSG00000157741.103104.683802300.556500.432407.210905.42470K562GLRX3
UBN2ENSG00000157741.101998.006102898.84050-0.536907.570806.30580K562GRSF1
UBN2ENSG00000157741.102499.412501885.278800.406704.163702.84840K562HNRNPA1
UBN2ENSG00000157741.101977.310701563.306500.338803.347302.69910K562HNRNPC
UBN2ENSG00000157741.101120.803702223.73200-0.9884011.925309.65140K562HNRNPM
UBN2ENSG00000157741.102480.466503665.92430-0.563605.345404.25690K562HSPD1
UBN2ENSG00000157741.102813.691004084.74040-0.537808.418706.77520K562KIF1C
UBN2ENSG00000157741.102904.249302111.385600.459902.210101.38680K562KRR1
UBN2ENSG00000157741.102824.346803910.06770-0.469305.720603.97580K562MAK16
UBN2ENSG00000157741.103312.748304575.93520-0.466007.112905.52780K562MBNL1
UBN2ENSG00000157741.103273.947902687.455600.284706.468905.39090K562NSUN2
UBN2ENSG00000157741.102903.547302202.023700.398904.382003.14450K562PCBP2
UBN2ENSG00000157741.103867.834302753.417600.490204.796603.70400K562PCBP3
UBN2ENSG00000157741.102919.361802111.932000.467006.824205.57570K562POLR2G
UBN2ENSG00000157741.101794.327003069.08740-0.774408.255706.66170K562PPIG
UBN2ENSG00000157741.101597.538502404.21510-0.589707.378106.33070K562PTBP1
UBN2ENSG00000157741.105574.331304351.703600.357104.289603.28050K562PUF60
UBN2ENSG00000157741.102566.183203817.18860-0.572907.657106.80030K562PUS1
UBN2ENSG00000157741.102326.301803719.20420-0.6770016.5735015.10880K562RBM15
UBN2ENSG00000157741.101166.245801644.44050-0.495703.919402.94310K562RPS19
UBN2ENSG00000157741.102037.845502518.00720-0.305202.192701.31120K562RPS3
UBN2ENSG00000157741.103361.504802651.789100.342002.346501.58990K562SF3A3
UBN2ENSG00000157741.103358.451802351.737200.514004.882603.56570K562SF3B1
UBN2ENSG00000157741.101497.789301116.291000.424003.719502.23300K562SLBP
UBN2ENSG00000157741.103757.210102716.811200.4676013.9189012.03590K562SRPK2
UBN2ENSG00000157741.103232.953302356.818300.455904.319803.44030K562SRSF1
UBN2ENSG00000157741.102702.951802296.720100.234902.502901.39370K562SRSF7
UBN2ENSG00000157741.104382.290703244.982100.433404.021002.46390K562STAU1
UBN2ENSG00000157741.102168.474601563.174700.472104.207102.93050K562SUPV3L1
UBN2ENSG00000157741.102566.805302033.353000.336003.080101.39220K562TBRG4
UBN2ENSG00000157741.102820.050301890.969100.576505.806904.10200K562U2AF1
UBN2ENSG00000157741.103663.729701952.855000.9076025.1688022.76240K562U2AF2
UBN2ENSG00000157741.103113.041702438.285600.352403.956402.90330K562WDR3
UBN2ENSG00000157741.102907.678002535.508000.197502.633101.80680K562WDR43
UBN2ENSG00000157741.104240.576603532.490800.263502.562101.32480K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBN2 is not available on ENCORE database.





5 RBPs can affect the splicing of UBN2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUBN2ENSG00000157741.10chr7+138966729138966801138964063138964106138967769138969320-0.606000.000040.00079excludedK562AQR
SEUBN2ENSG00000157741.10chr7+138936701138936803138921750138921843138943233138943371-0.183000.000010.00029excludedK562PUS1
SEUBN2ENSG00000157741.10chr7+138966750138966801138964063138964106138967769138969320-0.369000.000540.01018excludedK562PUS1
SEUBN2ENSG00000157741.10chr7+138966750138966801138964063138964106138967769138969320-0.485000.000080.00908excludedK562HNRNPL
SEUBN2ENSG00000157741.10chr7+138966750138966801138964063138964106138967769138969320-0.329000.000540.02142excludedK562UTP18
SEUBN2ENSG00000157741.10chr7+138936701138936803138921750138921843138943233138943371-0.118000.004090.07863excludedK562RBM15
A3SSUBN2ENSG00000157741.10chr7+1389586481389588201389586761389588201389580421389581560.145000.000010.00007longerK562AQR
A3SSUBN2ENSG00000157741.10chr7+1389580261389581561389580421389581561389570671389571860.177000.000010.00008longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBN2 is not avaliable on ENCORE database.