SURF4

General Information

Gene Name       : SURF4
Gene ID             : ENSG00000148248.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SURF4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SURF4ENSG00000148248.1338.4950.0544.27ENCSR000AEF
HepG2SURF4ENSG00000148248.13228.29198.23213.26ENCSR985KAT
K562SURF4ENSG00000148248.13104.0799.55101.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SURF4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SURF4 RNA is bound by 34 proteins.  







eCLIP assay for SURF4 is not avaliable on ENCORE database.





34 proteins are bound to SURF4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9136229176136229192-3'-UTR,intron-Distal3.014714.93449HepG2FAM120A
chr9136230311136230356-3'-UTR,CDS,intron-Distal,intron-Proximal3.096384.79993K562IGF2BP2
chr9136230178136230232-3'-UTR,intron-Distal,intron-Proximal3.2926138.77060K562UPF1
chr9136229795136229832-3'-UTR,intron-Distal3.2085313.03521K562FAM120A
chr9136230231136230278-3'-UTR,intron-Distal,intron-Proximal4.5093229.54374HepG2AKAP1
chr9136228418136228458-3'-UTR,intron-Distal3.197886.74417HepG2LARP4
chr9136229671136229699-3'-UTR,intron-Distal,intron-Proximal5.8126988.23387K562UPF1
chr9136230615136230692-3'-UTR,CDS,intron-Distal,intron-Proximal3.850917.09030K562SF3B4
chr9136229059136229139-3'-UTR,intron-Distal3.2383111.77640K562FAM120A
chr9136229314136229338-3'-UTR,intron-Distal4.2908114.90816HepG2AKAP1
chr9136229174136229200-3'-UTR,intron-Distal4.8395153.97510K562UPF1
chr9136230232136230278-3'-UTR,intron-Distal,intron-Proximal3.8173238.82246K562UPF1
chr9136229561136229586-3'-UTR,intron-Distal6.71805400.00000HepG2GRSF1
chr9136230119136230141-3'-UTR,intron-Distal4.9114622.38074HepG2AKAP1
chr9136229200136229221-3'-UTR,intron-Distal4.7531331.25891K562UPF1
chr9136228966136228993-3'-UTR,intron-Distal4.6285942.46930K562UPF1
chr9136228501136228521-3'-UTR,intron-Distal3.426564.41684HepG2FAM120A
chr9136229699136229723-3'-UTR,intron-Distal,intron-Proximal6.0602554.79604K562UPF1
chr9136228903136228949-3'-UTR,intron-Distal3.018124.79746HepG2FAM120A
chr9136229045136229076-3'-UTR,intron-Distal3.0155511.36740HepG2IGF2BP3
chr9136229801136229829-3'-UTR,intron-Distal5.2547828.72159HepG2LIN28B
chr9136229533136229542-3'-UTR,intron-Distal6.9717885.22909HepG2UPF1
chr9136229079136229142-3'-UTR,intron-Distal3.470269.47633HepG2IGF2BP3
chr9136229514136229534-3'-UTR,intron-Distal5.3114142.06337HepG2GRSF1
chr9136230734136230798-3'-UTR,CDS,intron-Distal3.5666111.19814HepG2U2AF2
chr9136229024136229051-3'-UTR,intron-Distal6.4628069.09672HepG2UPF1
chr9136230239136230281-3'-UTR,intron-Distal,intron-Proximal4.062783.44480HepG2TIA1
chr9136230386136230449-3'-UTR,CDS,intron-Distal,intron-Proximal3.8206716.63767HepG2SND1
chr9136229672136229718-3'-UTR,intron-Distal,intron-Proximal5.9247461.70936HepG2AKAP1
chr9136229346136229384-3'-UTR,intron-Distal3.3892729.48808K562UPF1
chr9136229367136229383-3'-UTR,intron-Distal3.9138115.72391HepG2FAM120A
chr9136229143136229176-3'-UTR,intron-Distal3.373538.66136HepG2FAM120A
chr9136229071136229143-3'-UTR,intron-Distal3.1184319.93078HepG2FAM120A
chr9136230249136230261-3'-UTR,intron-Distal,intron-Proximal4.062448.53392K562FAM120A
chr9136229617136229710-3'-UTR,intron-Distal,intron-Proximal4.0485126.75666K562AKAP1
chr9136230300136230355-3'-UTR,CDS,intron-Distal,intron-Proximal3.156166.25464HepG2IGF2BP1
chr9136229492136229543-3'-UTR,intron-Distal3.2168215.14278HepG2XPO5
chr9136230194136230287-3'-UTR,intron-Distal,intron-Proximal3.3430528.61636HepG2PCBP2
chr9136229586136229620-3'-UTR,intron-Distal6.01668400.00000HepG2GRSF1
chr9136228927136228966-3'-UTR,intron-Distal5.2184754.76030K562UPF1
chr9136229895136229940-3'-UTR,intron-Distal4.9928244.54795HepG2UPF1
chr9136230391136230445-3'-UTR,CDS,intron-Distal,intron-Proximal3.744678.65309K562SND1
chr9136229447136229617-3'-UTR,intron-Distal3.8947550.91446K562AKAP1
chr9136230016136230064-3'-UTR,intron-Distal,intron-Proximal3.473623.91928HepG2TIAL1
chr9136229534136229561-3'-UTR,intron-Distal6.76667400.00000HepG2GRSF1
chr9136229394136229435-3'-UTR,intron-Distal3.449867.36929K562YBX3
chr9136230084136230154-3'-UTR,intron-Distal3.8437922.55625K562FAM120A
chr9136230240136230270-3'-UTR,intron-Distal,intron-Proximal6.3800337.11299HepG2UPF1
chr9136229356136229441-3'-UTR,intron-Distal4.5696429.93719K562AKAP1
chr9136229897136229907-3'-UTR,intron-Distal3.3397417.51090HepG2AKAP1
chr9136229974136230002-3'-UTR,intron-Distal,intron-Proximal5.3319233.05812K562UPF1
chr9136229743136229774-3'-UTR,intron-Distal,intron-Proximal5.4069542.44833K562UPF1
chr9136229596136229727-3'-UTR,intron-Distal,intron-Proximal4.2738651.91934K562FAM120A
chr9136230212136230233-3'-UTR,intron-Distal,intron-Proximal3.273285.34614K562PABPC4
chr9136229022136229051-3'-UTR,intron-Distal3.7345311.39755HepG2FAM120A
chr9136230114136230168-3'-UTR,intron-Distal3.459829.36652HepG2IGF2BP1
chr9136228508136228563-3'-UTR,intron-Distal3.428958.17991HepG2LIN28B
chr9136229462136229502-3'-UTR,intron-Distal5.8563272.16923HepG2GRSF1
chr9136229947136229963-3'-UTR,intron-Distal4.3202434.17849K562UPF1
chr9136230592136230633-3'-UTR,CDS,intron-Distal,intron-Proximal4.0168212.81096HepG2SND1
chr9136229882136229910-3'-UTR,intron-Distal5.4223956.76914K562UPF1
chr9136229479136229515-3'-UTR,intron-Distal3.7861611.47723HepG2FAM120A
chr9136230043136230060-3'-UTR,intron-Distal,intron-Proximal4.5011629.92133HepG2AKAP1
chr9136229316136229367-3'-UTR,intron-Distal3.3664615.12504HepG2FAM120A
chr9136230731136230795-3'-UTR,CDS,intron-Distal3.409915.30462K562U2AF2
chr9136229369136229383-3'-UTR,intron-Distal6.4302856.25492HepG2UPF1
chr9136229462136229522-3'-UTR,intron-Distal4.3664119.79727K562FAM120A
chr9136230116136230177-3'-UTR,intron-Distal7.48513130.32237HepG2UPF1
chr9136229541136229612-3'-UTR,intron-Distal6.6025185.09860HepG2AKAP1
chr9136230014136230061-3'-UTR,intron-Distal,intron-Proximal3.0031011.05909HepG2LIN28B
chr9136229724136229748-3'-UTR,intron-Distal,intron-Proximal3.026244.88659HepG2LIN28B
chr9136230007136230055-3'-UTR,intron-Distal,intron-Proximal3.7779310.83615K562AKAP1
chr9136228987136229009-3'-UTR,intron-Distal5.3665123.82067HepG2AKAP1
chr9136228735136228781-3'-UTR,intron-Distal3.642295.42526K562IGF2BP2
chr9136229281136229311-3'-UTR,intron-Distal4.5027829.54316K562UPF1
chr9136229751136229795-3'-UTR,intron-Distal3.5592214.11287K562FAM120A
chr9136229017136229050-3'-UTR,intron-Distal5.0865229.16928HepG2AKAP1
chr9136229175136229229-3'-UTR,intron-Distal3.8710917.16463K562FAM120A
chr9136229538136229593-3'-UTR,intron-Distal6.01665400.00000K562UPF1
chr9136229647136229666-3'-UTR,intron-Distal,intron-Proximal7.82314252.63617HepG2UPF1
chr9136230176136230215-3'-UTR,intron-Distal6.3507159.71636HepG2AKAP1
chr9136229981136229995-3'-UTR,intron-Distal,intron-Proximal3.672578.10650K562FAM120A
chr9136229365136229385-3'-UTR,intron-Distal5.4662530.47507HepG2AKAP1
chr9136229515136229532-3'-UTR,intron-Distal3.847555.93919HepG2FAM120A
chr9136228892136228932-3'-UTR,intron-Distal6.0217512.29813K562AKAP1
chr9136228902136228927-3'-UTR,intron-Distal4.9575944.27919K562UPF1
chr9136230233136230260-3'-UTR,intron-Distal,intron-Proximal3.418916.16065K562PABPC4
chr9136230141136230164-3'-UTR,intron-Distal5.2483431.02706HepG2AKAP1
chr9136230110136230132-3'-UTR,intron-Distal3.7844119.40851HepG2FAM120A
chr9136229619136229650-3'-UTR,intron-Distal,intron-Proximal6.26991400.00000K562UPF1
chr9136229910136229947-3'-UTR,intron-Distal4.9789475.94654K562UPF1
chr9136229829136229846-3'-UTR,intron-Distal4.9826723.75695HepG2LIN28B
chr9136230015136230043-3'-UTR,intron-Distal,intron-Proximal4.6755235.94746HepG2AKAP1
chr9136229601136229700-3'-UTR,intron-Distal,intron-Proximal3.5103030.78933HepG2FAM120A
chr9136229542136229558-3'-UTR,intron-Distal6.4845780.68892HepG2UPF1
chr9136230132136230146-3'-UTR,intron-Distal3.7870321.63537HepG2FAM120A
chr9136229615136229636-3'-UTR,intron-Distal8.18195240.86120HepG2UPF1
chr9136229700136229708-3'-UTR,intron-Distal,intron-Proximal5.930448.93122HepG2FAM120A
chr9136230164136230176-3'-UTR,intron-Distal5.6043832.39440HepG2AKAP1
chr9136230605136230637-3'-UTR,CDS,intron-Distal,intron-Proximal3.6114810.48228K562SND1
chr9136229383136229433-3'-UTR,intron-Distal7.0396991.21835HepG2UPF1
chr9136229051136229071-3'-UTR,intron-Distal3.3848416.35064HepG2FAM120A
chr9136229104136229139-3'-UTR,intron-Distal6.8098684.85677HepG2UPF1
chr9136230164136230232-3'-UTR,intron-Distal,intron-Proximal3.2005813.24944K562FAM120A
chr9136229147136229177-3'-UTR,intron-Distal8.1105975.86769HepG2UPF1
chr9136229793136229846-3'-UTR,intron-Distal4.9914073.09206K562UPF1
chr9136229385136229410-3'-UTR,intron-Distal5.4403736.89255HepG2AKAP1
chr9136229558136229609-3'-UTR,intron-Distal7.41557400.00000HepG2UPF1
chr9136228880136228903-3'-UTR,intron-Distal4.7322723.48422HepG2AKAP1
chr9136229636136229647-3'-UTR,intron-Distal,intron-Proximal8.08759223.02982HepG2UPF1
chr9136229437136229448-3'-UTR,intron-Distal5.5995818.80827HepG2AKAP1
chr9136229336136229369-3'-UTR,intron-Distal6.3923356.76438HepG2UPF1
chr9136229652136229672-3'-UTR,intron-Distal,intron-Proximal6.1801262.66780HepG2AKAP1
chr9136230177136230229-3'-UTR,intron-Distal7.14656100.08041HepG2UPF1
chr9136230163136230224-3'-UTR,intron-Distal3.5227918.86716HepG2FAM120A
chr9136228389136228452-3'-UTR,intron-Distal4.308793.98716K562IGF2BP1
chr9136229452136229462-3'-UTR,intron-Distal6.0767648.53443HepG2GRSF1
chr9136229650136229671-3'-UTR,intron-Distal,intron-Proximal5.7027385.08456K562UPF1
chr9136228910136228964-3'-UTR,intron-Distal5.2394847.71177HepG2AKAP1
chr9136230146136230163-3'-UTR,intron-Distal3.8921522.98230HepG2FAM120A
chr9136228885136228902-3'-UTR,intron-Distal5.7051933.15329K562UPF1
chr9136230376136230445-3'-UTR,CDS,intron-Distal,intron-Proximal3.8265129.76612HepG2RPS3
chr9136229383136229425-3'-UTR,intron-Distal3.2981912.70673HepG2FAM120A
chr9136229142136229196-3'-UTR,intron-Distal4.9813710.11773HepG2IGF2BP3
chr9136230481136230528-3'-UTR,CDS,intron-Distal3.814598.39507K562SND1
chr9136230393136230425-3'-UTR,CDS,intron-Distal,intron-Proximal3.117483.97768HepG2IGF2BP3
chr9136228981136229019-3'-UTR,intron-Distal3.238125.96191HepG2STAU2
chr9136229384136229439-3'-UTR,intron-Distal3.6389730.33177K562UPF1
chr9136229699136229718-3'-UTR,intron-Distal,intron-Proximal6.0179569.07421HepG2UPF1
chr9136229945136229961-3'-UTR,intron-Distal3.8670820.58338HepG2AKAP1
chr9136229051136229068-3'-UTR,intron-Distal6.3259271.63318HepG2UPF1
chr9136229545136229624-3'-UTR,intron-Distal3.2479614.18394HepG2STAU2
chr9136230099136230138-3'-UTR,intron-Distal3.512617.17588HepG2IGF2BP3
chr9136229748136229801-3'-UTR,intron-Distal4.3986118.09703HepG2LIN28B
chr9136229459136229538-3'-UTR,intron-Distal6.16281400.00000K562UPF1
chr9136228907136228956-3'-UTR,intron-Distal4.744036.05696K562IGF2BP1
chr9136228977136229012-3'-UTR,intron-Distal3.350859.12349HepG2FAM120A
chr9136230484136230536-3'-UTR,CDS,intron-Distal3.302016.74069K562PABPC4
chr9136228503136228550-3'-UTR,intron-Distal5.3745439.64676K562UPF1
chr9136229502136229514-3'-UTR,intron-Distal5.0104638.15619HepG2GRSF1
chr9136230215136230231-3'-UTR,intron-Distal,intron-Proximal5.4699639.20832HepG2AKAP1
chr9136230245136230271-3'-UTR,intron-Distal,intron-Proximal3.952548.35679HepG2FAM120A
chr9136230583136230685-3'-UTR,CDS,intron-Distal,intron-Proximal3.7549611.01755K562BUD13
chr9136229050136229075-3'-UTR,intron-Distal4.8563040.52042HepG2AKAP1
chr9136228521136228562-3'-UTR,intron-Distal3.447278.93588HepG2FAM120A
chr9136229091136229174-3'-UTR,intron-Distal4.2816078.90091K562UPF1
chr9136229134136229176-3'-UTR,intron-Distal5.1006043.83636HepG2AKAP1
chr9136229409136229415-3'-UTR,intron-Distal4.290107.91182K562FAM120A
chr9136230016136230059-3'-UTR,intron-Distal,intron-Proximal6.3999761.13857HepG2UPF1
chr9136229083136229104-3'-UTR,intron-Distal6.2447980.35769HepG2UPF1
chr9136229139136229175-3'-UTR,intron-Distal3.1734014.04790K562FAM120A
chr9136230010136230060-3'-UTR,intron-Distal,intron-Proximal4.6892568.32288K562UPF1
chr9136229452136229479-3'-UTR,intron-Distal3.363537.05063HepG2FAM120A
chr9136229463136229541-3'-UTR,intron-Distal5.6276157.99996HepG2AKAP1
chr9136229852136229864-3'-UTR,intron-Distal4.6994323.21013K562UPF1
chr9136229410136229437-3'-UTR,intron-Distal5.9884349.99286HepG2AKAP1
chr9136229176136229199-3'-UTR,intron-Distal4.7205128.61916HepG2AKAP1
chr9136229666136229699-3'-UTR,intron-Distal,intron-Proximal7.06552400.00000HepG2UPF1
chr9136229612136229640-3'-UTR,intron-Distal5.9985255.31133HepG2AKAP1
chr9136229459136229545-3'-UTR,intron-Distal3.1643511.66041HepG2STAU2
chr9136229609136229615-3'-UTR,intron-Distal8.39580185.88965HepG2UPF1
chr9136228529136228576-3'-UTR,intron-Distal6.3060554.64788HepG2UPF1
chr9136229471136229533-3'-UTR,intron-Distal6.58813400.00000HepG2UPF1
chr9136229068136229075-3'-UTR,intron-Distal6.1509873.18393HepG2UPF1
chr9136229907136229945-3'-UTR,intron-Distal3.7710235.87559HepG2AKAP1
chr9136230006136230058-3'-UTR,intron-Distal,intron-Proximal3.3263519.34609HepG2FAM120A
chr9136228843136228953-3'-UTR,intron-Distal3.7028627.80501K562FAM120A
chr9136228528136228579-3'-UTR,intron-Distal3.008535.90858HepG2STAU2
chr9136229903136229945-3'-UTR,intron-Distal4.0918217.48228K562FAM120A
chr9136229075136229082-3'-UTR,intron-Distal6.0886868.78196HepG2UPF1
chr9136229034136229134-3'-UTR,intron-Distal3.7005518.88157K562AKAP1
chr9136229593136229619-3'-UTR,intron-Distal5.9679777.44737K562UPF1
chr9136229338136229365-3'-UTR,intron-Distal5.0822526.23597HepG2AKAP1
chr9136229621136229688-3'-UTR,intron-Distal,intron-Proximal3.5990626.27403HepG2GRSF1
chr9136229078136229134-3'-UTR,intron-Distal4.8954853.67900HepG2AKAP1
chr9136242824136242960-5'-UTR,CDS,intron-Distal,intron-Proximal5.16829400.00000HepG2DDX3X
chr9136242855136242942-5'-UTR,intron-Distal,intron-Proximal4.4307154.76828K562DDX3X
chr9136242844136242929-5'-UTR,intron-Distal,intron-Proximal4.2082910.93663K562DROSHA
chr9136242872136242950-5'-UTR,intron-Distal,intron-Proximal3.614575.00233HepG2FTO
chr9136242843136242927-5'-UTR,intron-Distal,intron-Proximal3.7310439.86423HepG2RPS3
chr9136242833136242855-5'-UTR,CDS,intron-Distal3.3931319.59715K562DDX3X
chr9136242870136242930-5'-UTR,intron-Distal,intron-Proximal5.1994410.65289K562GEMIN5
chr9136231857136231903-CDS,intron-Distal,intron-Proximal4.6469621.57380K562SND1
chr9136231858136231971-CDS,intron-Distal,intron-Proximal3.276045.54036HepG2AQR
chr9136231800136231854-CDS,intron-Distal,intron-Proximal5.4853520.42106HepG2RPS3
chr9136232884136232903-CDS,intron-Distal4.080406.47873K562SND1
chr9136234227136234270-CDS,intron-Distal5.2483138.23683HepG2DDX3X
chr9136231793136231813-CDS,intron-Distal,intron-Proximal3.7757117.40919HepG2SND1
chr9136231743136231857-CDS,intron-Distal,intron-Proximal5.2933621.96356K562SND1
chr9136234302136234321-CDS,intron-Distal3.8714829.14003HepG2DDX3X
chr9136234135136234167-CDS,intron-Distal3.7976031.23959HepG2DDX3X
chr9136231749136231793-CDS,intron-Distal,intron-Proximal4.0485018.49027HepG2SND1
chr9136233475136233490-CDS,intron-Distal4.017397.05547K562SND1
chr9136233475136233483-CDS,intron-Distal5.173337.02967HepG2PRPF8
chr9136234270136234302-CDS,intron-Distal4.1662130.13487HepG2DDX3X
chr9136234236136234273-CDS,intron-Distal3.7918011.49162K562YBX3
chr9136234281136234302-CDS,intron-Distal4.399614.77486K562YBX3
chr9136242775136242796-CDS,intron-Distal3.216614.80460HepG2AQR
chr9136234306136234321-CDS,intron-Distal3.732826.85451K562YBX3
chr9136242740136242802-CDS,intron-Distal3.0907711.15870HepG2PRPF8
chr9136234134136234154-CDS,intron-Distal,intron-Proximal3.8461710.27034HepG2RPS3
chr9136233525136233551-CDS,intron-Distal3.7460317.94873HepG2DDX3X
chr9136242792136242833-CDS,intron-Distal3.0634020.91995K562DDX3X
chr9136242715136242808-CDS,intron-Distal3.2079112.00537HepG2EFTUD2
chr9136242793136242824-CDS,intron-Distal4.1651543.15916HepG2DDX3X
chr9136234112136234139-CDS,intron-Distal,intron-Proximal3.8955111.47124K562AQR
chr9136231669136231719-CDS,intron-Distal,intron-Proximal4.3976610.40403K562PRPF8
chr9136234182136234291-CDS,intron-Distal3.7336631.10136HepG2RPS3
chr9136231670136231724-CDS,intron-Distal,intron-Proximal3.464544.83230K562AQR
chr9136232860136232891-CDS,intron-Distal,intron-Proximal3.341463.36366K562LIN28B
chr9136232860136232867-CDS,intron-Distal,intron-Proximal4.3149710.65286HepG2RPS3
chr9136234291136234322-CDS,intron-Distal,intron-Proximal3.6892212.34914HepG2RPS3
chr9136232860136232873-CDS,intron-Distal,intron-Proximal3.9300111.92869K562SND1
chr9136232873136232942-CDS,intron-Distal,intron-Proximal4.490833.93614HepG2AQR
chr9136234167136234189-CDS,intron-Distal3.4667013.15899HepG2DDX3X
chr9136231844136231903-CDS,intron-Distal,intron-Proximal4.4589533.36699HepG2SND1
chr9136231854136231904-CDS,intron-Distal,intron-Proximal5.4582726.90359HepG2RPS3
chr9136233436136233476-CDS,intron-Distal,intron-Proximal3.751243.09957HepG2AQR
chr9136232860136232869-CDS,intron-Distal,intron-Proximal3.6906813.78635HepG2SND1
chr9136232871136232882-CDS,intron-Distal3.491454.84058HepG2LIN28B
chr9136233525136233551-CDS,intron-Distal6.2543210.28736HepG2RPS3
chr9136231813136231843-CDS,intron-Distal,intron-Proximal3.7349018.16533HepG2SND1
chr9136233422136233484-CDS,intron-Distal,intron-Proximal3.6861511.14708K562PRPF8
chr9136234228136234236-CDS,intron-Distal3.089098.08912K562YBX3
chr9136232786136232862-CDS,intron-Distal,intron-Proximal4.5608614.10841K562AQR
chr9136231674136231743-CDS,intron-Distal,intron-Proximal5.2884516.86672HepG2PRPF8
chr9136232784136232831-intron-Distal,intron-Proximal3.042143.20463K562TIA1
chr9136233303136233370-intron-Distal3.225323.48223HepG2RBFOX2
chr9136233463136233475-intron-Distal,intron-Proximal4.7310014.41880K562AQR
chr9136232804136232848-intron-Distal,intron-Proximal3.944725.43815HepG2PRPF8
chr9136242137136242195-intron-Distal3.034707.07750HepG2EFTUD2
chr9136234892136234939-intron-Distal3.909683.76710K562NONO
chr9136234089136234112-intron-Distal,intron-Proximal5.3587914.99196K562AQR
chr9136237468136237527-intron-Distal5.0046114.03469HepG2HNRNPM
chr9136234329136234409-intron-Distal,intron-Proximal3.867399.39688HepG2SF3B4
chr9136242421136242485-intron-Distal4.8011211.24022HepG2EFTUD2
chr9136242132136242197-intron-Distal3.848486.09862K562NONO
chr9136233971136234019-intron-Distal3.751114.65388K562PRPF8
chr9136237556136237653-intron-Distal4.163167.08707K562NONO
chr9136235550136235654-intron-Distal5.1432619.53111K562RBFOX2
chr9136237471136237523-intron-Distal3.155694.40677K562HNRNPM
chr9136231511136231571-intron-Distal5.3514010.84270HepG2HNRNPC
chr9136242435136242473-intron-Distal4.067454.38582HepG2XRN2
chr9136237477136237529-intron-Distal4.225933.57432K562NONO
chr9136237953136237998-intron-Distal3.031417.61051HepG2HNRNPM
chr9136234021136234089-intron-Distal,intron-Proximal4.540076.01372K562AQR
chr9136232007136232065-intron-Distal4.810286.92529HepG2RBFOX2
chr9136242731136242775-intron-Distal3.408275.63071HepG2AQR
chr9136235543136235650-intron-Distal4.8654912.92345HepG2RBFOX2
chr9136235125136235162-intron-Distal3.941753.82910K562NONO
chr9136242298136242411-intron-Distal4.4366720.90728HepG2EFTUD2
chr9136237527136237563-intron-Distal3.450554.97523HepG2HNRNPM
chr9136234435136234494-intron-Distal,intron-Proximal4.318675.03032HepG2SF3B4
chr9136233433136233470-intron-Distal,intron-Proximal5.3649928.50929HepG2PRPF8
chr9136233449136233463-intron-Distal,intron-Proximal5.3311515.34985K562AQR
chr9136242300136242407-intron-Distal5.013564.22574K562XRN2
chr9136233389136233444-intron-Distal,intron-Proximal5.066785.50038K562RBM22
chr9136232796136232857-intron-Distal,intron-Proximal3.398435.87745K562BUD13
chr9136233403136233449-intron-Distal,intron-Proximal5.2592221.77316K562AQR
chr9136233470136233475-intron-Distal,intron-Proximal5.6165624.88330HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SURF4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SURF4 is not available on ENCORE database.

  • 104 RBPs can affect the levels of SURF4.  








The Knockdown/knockout RNA-Seq assay for SURF4 is not available on ENCORE database.





104 RBPs can affect the gene expression of SURF4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SURF4ENSG00000148248.94938.081006850.38340-0.472203.804201.79660HepG2AARS
SURF4ENSG00000148248.94078.240406169.38000-0.597209.864107.99940HepG2AATF
SURF4ENSG00000148248.98334.2426010536.71160-0.338303.032002.04470HepG2ABCF1
SURF4ENSG00000148248.96474.101108858.61980-0.4524015.2526014.06870HepG2ACO1
SURF4ENSG00000148248.95303.810806522.41120-0.298402.468101.52600HepG2ADAR
SURF4ENSG00000148248.97489.5718014855.04580-0.9880016.4971015.30910HepG2AKAP1
SURF4ENSG00000148248.96566.125908899.99110-0.4388011.7783010.34050HepG2AKAP8L
SURF4ENSG00000148248.910184.7042012290.96710-0.271202.036101.35850HepG2ASCC1
SURF4ENSG00000148248.99048.1472011201.89390-0.308006.467805.48750HepG2AUH
SURF4ENSG00000148248.96460.445005370.563800.266502.323901.77010HepG2BOP1
SURF4ENSG00000148248.96453.677407892.33510-0.290303.395502.04010HepG2BUD13
SURF4ENSG00000148248.97761.5078010305.02900-0.408902.901501.90290HepG2CCAR1
SURF4ENSG00000148248.96840.8750011677.37350-0.7715013.2601011.70740HepG2CIRBP
SURF4ENSG00000148248.97458.438608856.39520-0.247805.905204.99990HepG2CKAP4
SURF4ENSG00000148248.93665.473205656.24430-0.625804.393803.42580HepG2CNOT7
SURF4ENSG00000148248.94527.265606317.40720-0.480703.556601.94150HepG2CSTF2T
SURF4ENSG00000148248.96485.047908192.81650-0.337208.888507.54790HepG2DDX19B
SURF4ENSG00000148248.95425.367506805.10000-0.326903.470302.71840HepG2DDX21
SURF4ENSG00000148248.910952.1132014229.28870-0.377703.412402.72620HepG2DDX3X
SURF4ENSG00000148248.98751.821007202.149200.281102.569501.31780HepG2DDX47
SURF4ENSG00000148248.94992.246705991.65420-0.263302.739401.39130HepG2DDX52
SURF4ENSG00000148248.94674.485006872.23950-0.556006.499405.37370HepG2DDX55
SURF4ENSG00000148248.97970.3023012224.95200-0.617106.897305.95720HepG2DDX6
SURF4ENSG00000148248.94444.224108475.22120-0.9313049.7277047.78960HepG2DKC1
SURF4ENSG00000148248.96308.353307991.10020-0.341104.704303.20120HepG2EIF2S2
SURF4ENSG00000148248.94022.656405802.52350-0.528506.178104.86640HepG2EIF3D
SURF4ENSG00000148248.94958.007806427.20130-0.374405.126203.71250HepG2EIF3G
SURF4ENSG00000148248.98605.3233012984.82070-0.593506.527305.54410HepG2EIF4A3
SURF4ENSG00000148248.97440.1305010184.80860-0.4530012.7397011.20220HepG2EIF4G1
SURF4ENSG00000148248.96935.220509125.84030-0.396004.967703.54250HepG2ESF1
SURF4ENSG00000148248.97833.8419012861.65220-0.7153030.5829028.96080HepG2ETF1
SURF4ENSG00000148248.96139.9713010639.02310-0.7931011.328809.92140HepG2FIP1L1
SURF4ENSG00000148248.93259.966504938.99760-0.599402.382001.44590HepG2FTO
SURF4ENSG00000148248.97063.200109008.46380-0.351004.229703.26840HepG2FUBP3
SURF4ENSG00000148248.910661.6506013103.60780-0.297502.384601.74050HepG2FXR1
SURF4ENSG00000148248.97264.8606012154.21940-0.7425010.465609.21330HepG2G3BP1
SURF4ENSG00000148248.910650.4774012904.95830-0.277002.202301.41290HepG2G3BP2
SURF4ENSG00000148248.97386.105908457.26440-0.195402.825701.83830HepG2HDGF
SURF4ENSG00000148248.95872.539407375.36180-0.328703.534602.75850HepG2HNRNPC
SURF4ENSG00000148248.99693.3065012310.27930-0.344803.594402.80460HepG2HNRNPK
SURF4ENSG00000148248.96059.243507339.00870-0.276403.283002.25510HepG2HNRNPM
SURF4ENSG00000148248.95629.208107326.59430-0.380209.352708.28810HepG2HNRNPU
SURF4ENSG00000148248.99823.4477012354.03660-0.330702.820502.13970HepG2IGF2BP2
SURF4ENSG00000148248.95983.4727011595.59020-0.954504.522903.27490HepG2IGF2BP3
SURF4ENSG00000148248.96133.063407483.85960-0.287207.806606.64150HepG2ILF2
SURF4ENSG00000148248.99342.9977012426.91340-0.411502.981601.93490HepG2KHSRP
SURF4ENSG00000148248.95796.8337013181.15710-1.1851024.0628022.35810HepG2MATR3
SURF4ENSG00000148248.910472.8765013491.32080-0.365403.118202.44830HepG2NCBP2
SURF4ENSG00000148248.94434.408105593.77890-0.335103.430901.85770HepG2NIP7
SURF4ENSG00000148248.97335.1947010236.55330-0.480809.976408.55930HepG2NOL12
SURF4ENSG00000148248.97571.704805170.207200.550303.159102.20620HepG2PABPC1
SURF4ENSG00000148248.96430.841507251.97200-0.173402.241701.47150HepG2PARN
SURF4ENSG00000148248.911195.4600012619.87140-0.172802.683702.08440HepG2PCBP1
SURF4ENSG00000148248.94247.729405299.66540-0.319202.926402.09670HepG2PRPF8
SURF4ENSG00000148248.98495.4369012840.78480-0.5960023.0726021.78340HepG2PTBP1
SURF4ENSG00000148248.98876.1103010373.26600-0.224905.505204.72830HepG2PUM1
SURF4ENSG00000148248.96784.0642013907.75280-1.0357046.4471044.48290HepG2QKI
SURF4ENSG00000148248.92827.972706851.18380-1.2766013.9266012.45420HepG2RAVER1
SURF4ENSG00000148248.97741.9070011064.74900-0.5152010.523309.01130HepG2RBM15
SURF4ENSG00000148248.94926.5567010749.88220-1.1257060.4180058.62390HepG2RBM22
SURF4ENSG00000148248.98325.7474012621.85240-0.6003012.5065011.13600HepG2RBM25
SURF4ENSG00000148248.97933.8864014290.89810-0.8490038.4662036.96130HepG2NELFE
SURF4ENSG00000148248.98015.7997013309.41710-0.7315036.3880034.64500HepG2RECQL
SURF4ENSG00000148248.95620.679309485.82210-0.7550015.5916014.22410HepG2RPLP0
SURF4ENSG00000148248.93444.569405646.41400-0.7130015.3925014.10600HepG2RPS19
SURF4ENSG00000148248.95534.837106880.03570-0.313903.071102.22820HepG2RPS2
SURF4ENSG00000148248.95632.814207023.25050-0.318303.066101.93370HepG2RPS5
SURF4ENSG00000148248.93848.411105242.29790-0.445904.396403.43020HepG2RRP9
SURF4ENSG00000148248.98879.366006524.608200.4445015.7976014.44780HepG2SAFB2
SURF4ENSG00000148248.97917.5005013369.64290-0.7558032.0837030.46410HepG2SF3B4
SURF4ENSG00000148248.910967.719609369.809500.227105.513204.57980HepG2SLBP
SURF4ENSG00000148248.96572.701607608.71470-0.211204.916404.09910HepG2SMN1
SURF4ENSG00000148248.96221.3992012141.45670-0.9646070.0177068.36840HepG2SRFBP1
SURF4ENSG00000148248.98735.3559013954.71530-0.6758025.7078024.58490HepG2SRSF1
SURF4ENSG00000148248.98147.6451011352.64810-0.4786017.1186015.95600HepG2SRSF9
SURF4ENSG00000148248.97937.9593010541.41500-0.4092012.2817011.35240HepG2SSB
SURF4ENSG00000148248.93663.370804942.22080-0.432003.024601.87190HepG2STIP1
SURF4ENSG00000148248.98712.8154010972.69570-0.332709.840608.78900HepG2SUCLG1
SURF4ENSG00000148248.99359.145207181.988800.381904.800303.57880HepG2SUPT6H
SURF4ENSG00000148248.94307.282006840.71200-0.667409.261208.14580HepG2SUPV3L1
SURF4ENSG00000148248.95205.5666012542.21710-1.2687073.9428071.55320HepG2TAF15
SURF4ENSG00000148248.96678.786605199.035900.361203.776102.94470HepG2TARDBP
SURF4ENSG00000148248.98081.6975011525.46440-0.512109.758408.20740HepG2TIA1
SURF4ENSG00000148248.94193.321407118.84950-0.7636021.5745020.42330HepG2TIAL1
SURF4ENSG00000148248.99506.767707182.815200.4043011.0736010.05810HepG2TRIM56
SURF4ENSG00000148248.96425.363909099.67170-0.502006.912405.93070HepG2U2AF1
SURF4ENSG00000148248.97964.2951010105.21160-0.343502.588501.77890HepG2UBE2L3
SURF4ENSG00000148248.92520.598304040.67980-0.680809.800008.37190HepG2UCHL5
SURF4ENSG00000148248.98430.3634010068.31700-0.256205.154404.37950HepG2UTP3
SURF4ENSG00000148248.94791.691306739.00210-0.492003.433202.00920HepG2XRCC5
SURF4ENSG00000148248.94947.092907079.21250-0.5170020.8285019.30020HepG2ZC3H8
SURF4ENSG00000148248.98365.892706969.905200.263302.396501.84420K562AQR
SURF4ENSG00000148248.92304.079102892.32020-0.328002.708101.66760K562CCAR1
SURF4ENSG00000148248.93673.712904505.24410-0.294402.604601.36490K562CIRBP
SURF4ENSG00000148248.96118.959906871.71000-0.167401.989801.42060K562DDX47
SURF4ENSG00000148248.92435.337503237.88970-0.410903.786102.18530K562DHX30
SURF4ENSG00000148248.98666.064207551.372100.198502.554201.71720K562DKC1
SURF4ENSG00000148248.97509.111005810.378700.369907.136006.06030K562EIF2S2
SURF4ENSG00000148248.95751.224404157.082400.468206.131404.91890K562EIF4A3
SURF4ENSG00000148248.97288.096408590.22890-0.237203.491202.43840K562EIF4G2
SURF4ENSG00000148248.93859.824304773.43510-0.306503.361101.94780K562EXOSC5
SURF4ENSG00000148248.95790.037104647.723100.316902.966602.08660K562FIP1L1
SURF4ENSG00000148248.92887.178903642.01960-0.335102.598901.51300K562FKBP4
SURF4ENSG00000148248.95734.462904323.180500.407508.384707.40220K562FXR1
SURF4ENSG00000148248.94020.851002899.967400.471406.258705.06670K562GPKOW
SURF4ENSG00000148248.93425.221104194.15710-0.292203.024602.40350K562HNRNPC
SURF4ENSG00000148248.95087.732103823.230500.412102.663201.75050K562HNRNPM
SURF4ENSG00000148248.95388.011006323.52490-0.231006.108705.06040K562NSUN2
SURF4ENSG00000148248.95178.010304318.778600.261702.711101.37460K562PCBP1
SURF4ENSG00000148248.94962.593406071.78460-0.291002.113601.38580K562PCBP3
SURF4ENSG00000148248.93841.127204657.20940-0.277903.078502.23230K562POLR2G
SURF4ENSG00000148248.96940.096305276.679200.395204.347103.28750K562PPIG
SURF4ENSG00000148248.94399.256203346.819000.394403.961503.06510K562PRPF8
SURF4ENSG00000148248.95254.679404292.250700.291803.193002.48520K562PTBP1
SURF4ENSG00000148248.912208.842809372.515300.381304.512503.47560K562PUF60
SURF4ENSG00000148248.94193.258503408.974600.298602.089801.38440K562RPS19
SURF4ENSG00000148248.96286.019003798.193600.726702.961201.70140K562SF1
SURF4ENSG00000148248.93995.637803233.582900.305203.531402.56170K562SF3B4
SURF4ENSG00000148248.95920.522204207.924500.492508.162906.95820K562SRSF1
SURF4ENSG00000148248.95347.910104258.505000.328502.892002.16910K562TARDBP
SURF4ENSG00000148248.94822.710204107.858700.231402.197301.47460K562TIA1
SURF4ENSG00000148248.95287.395905966.23520-0.174302.591401.76970K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SURF4 is not available on ENCORE database.





11 RBPs can affect the splicing of SURF4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.144000.000010.01114excludedK562TAF15
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.166000.000000.00000excludedK562SF3B4
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.120000.000000.00000excludedK562PUS1
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.126000.000020.00073excludedK562U2AF1
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.059000.000270.05981excludedK562SBDS
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.072000.000010.00086excludedK562UTP18
SESURF4ENSG00000148248.9chr9-136231715136231902136228324136230635136232860136232904-0.144000.000000.00000excludedK562RBM15
SESURF4ENSG00000148248.9chr9-136231715136231902136230430136230635136232860136232904-0.066000.000060.00299excludedK562AGGF1
SESURF4ENSG00000148248.9chr9-1362317151362319221362304301362306351362328601362329040.052000.001910.06529includedK562PTBP1
A3SSSURF4ENSG00000148248.9chr9-1362328601362330061362328601362329041362334741362335510.197000.000000.00000longerK562U2AF2
A3SSSURF4ENSG00000148248.9chr9-1362328601362330061362328601362329041362334741362335510.055000.000460.02824longerK562SF3B4
A3SSSURF4ENSG00000148248.9chr9-1362317151362319551362317151362319021362328601362330660.092000.000000.00000longerK562AQR
A3SSSURF4ENSG00000148248.9chr9-1362328601362330061362328601362329041362334741362335510.101000.000000.00000longerK562AQR
A3SSSURF4ENSG00000148248.9chr9-136231790136231979136231790136231955136232860136233066-0.627000.002690.01673shorterK562AQR
A3SSSURF4ENSG00000148248.9chr9-1362328601362330061362328601362329041362334741362335510.139000.000000.00000longerK562U2AF1
MXESURF4ENSG00000148248.9chr9-136232860136232904136234134136234321136230063136230635136242792136242930-0.118000.000000.000012includedHepG2U2AF1
MXESURF4ENSG00000148248.9chr9-136232860136232904136233474136233551136230063136230635136234134136234321-0.201000.004920.054592includedK562U2AF2
MXESURF4ENSG00000148248.9chr9-136232860136232904136234134136234321136230063136230635136242792136242930-0.128000.002120.051852includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SURF4 is not avaliable on ENCORE database.