SNRPB

General Information

Gene Name       : SNRPB
Gene ID             : ENSG00000125835.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SNRPB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNRPBENSG00000125835.1854.40131.0592.73ENCSR000AEF
HepG2SNRPBENSG00000125835.18441.93266.63354.28ENCSR985KAT
K562SNRPBENSG00000125835.18243.50125.16184.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNRPB is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNRPB RNA is bound by 33 proteins.  







eCLIP assay for SNRPB is not avaliable on ENCORE database.





33 proteins are bound to SNRPB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2024422972442348-3'-UTR,intron-Distal,intron-Proximal,polyA_signal4.807124.25353HepG2TIA1
chr2024432822443337-3'-UTR,CDS,intron-Distal5.6564666.07047HepG2RPS3
chr2024432812443335-3'-UTR,CDS,intron-Distal,intron-Proximal3.7616540.84022HepG2LARP4
chr2024438342443880-3'-UTR,CDS,intron-Distal,intron-Proximal3.836145.83621K562AQR
chr2024423042442350-3'-UTR,intron-Distal,intron-Proximal,polyA_signal3.447044.88668HepG2AKAP1
chr2024423472442425-3'-UTR,CDS,intron-Distal3.8940115.43032K562PCBP1
chr2024433372443359-3'-UTR,CDS,intron-Distal5.7789724.59154HepG2RPS3
chr2024424432442486-3'-UTR,intron-Distal3.9618239.93078HepG2LARP4
chr2024433772443434-3'-UTR,CDS,intron-Distal,intron-Proximal5.874888.83608K562AQR
chr2024423132442384-3'-UTR,intron-Distal3.2316614.65880K562GEMIN5
chr2024424012442442-3'-UTR,CDS,intron-Distal3.911277.22017K562LARP4
chr2024433592443386-3'-UTR,CDS,intron-Distal4.7751120.30258HepG2RPS3
chr2024433352443380-3'-UTR,CDS,intron-Distal3.9094122.48251HepG2LARP4
chr2024437452443760-3'-UTR,CDS,intron-Distal4.0133514.40246HepG2LARP4
chr2024423072442345-3'-UTR,intron-Distal,polyA_signal5.8972546.07565HepG2LARP4
chr2024464512446465-3'-UTR,CDS,intron-Distal3.421609.52333HepG2G3BP1
chr2024432162443251-3'-UTR,intron-Distal,intron-Proximal4.086303.54514K562TIA1
chr2024438372443893-3'-UTR,CDS,intron-Distal,intron-Proximal4.413897.26476HepG2AQR
chr2024423072442349-3'-UTR,intron-Distal,polyA_signal4.221909.18060K562APOBEC3C
chr2024430862443123-3'-UTR,intron-Distal3.199635.11990K562AQR
chr2024444022444422-3'-UTR,CDS,intron-Distal4.217715.23270K562GEMIN5
chr2024424122442470-3'-UTR,CDS,intron-Distal3.038555.00875K562BUD13
chr2024431572443186-3'-UTR,intron-Distal,intron-Proximal4.639915.50285K562PRPF8
chr2024463542446385-3'-UTR,CDS,intron-Distal3.017774.67981HepG2LIN28B
chr2024432842443362-3'-UTR,CDS,intron-Distal4.5589328.58135K562RPS3
chr2024445242444545-3'-UTR,CDS,intron-Distal3.062224.55076K562LIN28B
chr2024424142442492-3'-UTR,CDS,intron-Distal6.1028683.40165HepG2SUB1
chr2024431782443266-3'-UTR,CDS,intron-Distal,intron-Proximal4.3147314.93802K562AQR
chr2024438622443872-3'-UTR,CDS,intron-Distal4.2599215.36066HepG2RPS3
chr2024423402442418-3'-UTR,CDS,intron-Distal6.05464400.00000K562PUM2
chr2024463112446361-3'-UTR,CDS,intron-Distal,intron-Proximal5.5798011.04988HepG2AQR
chr2024423062442340-3'-UTR,intron-Distal,polyA_signal7.16569400.00000K562PUM2
chr2024433042443388-3'-UTR,CDS,intron-Distal3.303825.85678K562FMR1
chr2024425372442576-3'-UTR,intron-Distal4.8157648.13170HepG2LARP4
chr2024444732444535-3'-UTR,CDS,intron-Distal4.8697570.02734HepG2RPS3
chr2024443952444441-3'-UTR,CDS,intron-Distal6.0054016.80190K562RPS3
chr2024463552446384-3'-UTR,CDS,intron-Distal3.240415.17813K562LIN28B
chr2024443712444424-3'-UTR,CDS,intron-Distal,intron-Proximal3.536935.97015HepG2EFTUD2
chr2024424202442464-3'-UTR,CDS,intron-Distal3.944759.04524K562AQR
chr2024423452442404-3'-UTR,intron-Distal5.2486970.39649HepG2LARP4
chr2024445042444562-3'-UTR,CDS,intron-Distal,intron-Proximal4.6267610.88673HepG2AQR
chr2024437352443807-3'-UTR,CDS,intron-Distal3.9292420.67983HepG2G3BP1
chr2024431682443204-3'-UTR,intron-Distal,intron-Proximal3.849317.53528HepG2EFTUD2
chr2024424042442443-3'-UTR,CDS,intron-Distal3.6038341.00514HepG2LARP4
chr2024425202442576-3'-UTR,intron-Distal3.5526621.88028HepG2DDX55
chr2024433232443403-3'-UTR,CDS,intron-Distal4.3059522.82498HepG2G3BP1
chr2024437342443766-3'-UTR,CDS,intron-Distal,intron-Proximal4.7710025.53306HepG2RPS3
chr2024423072442345-3'-UTR,intron-Distal,polyA_signal3.6445932.09376K562PABPC4
chr2024438362443872-3'-UTR,CDS,intron-Distal3.022137.38586HepG2PPIG
chr2024438242443873-3'-UTR,CDS,intron-Distal4.5497522.83236HepG2G3BP1
chr2024432302443321-3'-UTR,CDS,intron-Distal,intron-Proximal4.8937223.46466HepG2PRPF8
chr2024424202442440-3'-UTR,CDS,intron-Distal3.5280418.60450HepG2RPS3
chr2024444852444525-3'-UTR,CDS,intron-Distal4.6730913.04923K562RPS3
chr2024444022444427-3'-UTR,CDS,intron-Distal3.0467111.97576HepG2DDX55
chr2024423232442340-3'-UTR,intron-Distal3.291538.47737K562YBX3
chr2024433992443402-3'-UTR,CDS,intron-Distal3.1417111.06851HepG2LARP4
chr2024425032442537-3'-UTR,intron-Distal5.5520737.70639HepG2LARP4
chr2024463612446430-3'-UTR,CDS,intron-Distal3.3262513.69867HepG2G3BP1
chr2024437662443814-3'-UTR,CDS,intron-Distal4.8104732.96098HepG2RPS3
chr2024443942444471-3'-UTR,CDS,intron-Distal5.01641400.00000HepG2RPS3
chr2024463062446356-3'-UTR,CDS,intron-Distal,intron-Proximal5.1007312.60993K562AQR
chr2024425102442553-3'-UTR,intron-Distal3.895254.77875HepG2SUB1
chr2024425052442579-3'-UTR,CDS,intron-Distal4.2940712.14680K562PABPC4
chr2024432812443320-3'-UTR,CDS,intron-Distal,intron-Proximal3.0639610.91560K562DDX55
chr2024432182443257-3'-UTR,intron-Distal,intron-Proximal3.827443.03597HepG2TIA1
chr2024464252446486-3'-UTR,CDS,intron-Distal,intron-Proximal3.4112012.67044HepG2AQR
chr2024423092442347-3'-UTR,intron-Distal,polyA_signal4.9573215.18786HepG2SUB1
chr2024432812443344-3'-UTR,CDS,intron-Distal,intron-Proximal5.2927110.74347K562PCBP1
chr2024423262442451-3'-UTR,CDS,intron-Distal4.5861219.54509HepG2PCBP1
chr2024433752443411-3'-UTR,CDS,intron-Distal,intron-Proximal3.207366.12954HepG2PRPF8
chr2024436992443761-3'-UTR,CDS,intron-Distal,intron-Proximal5.3536227.87851HepG2PRPF8
chr2024433902443426-3'-UTR,CDS,intron-Distal,intron-Proximal4.632734.28193HepG2AQR
chr2024425112442574-3'-UTR,intron-Distal3.591488.52739K562DDX6
chr2024424522442486-3'-UTR,intron-Distal3.441879.22394K562PABPC4
chr2024433722443397-3'-UTR,CDS,intron-Distal5.139304.55547K562PCBP1
chr2024443922444448-3'-UTR,CDS,intron-Distal,intron-Proximal3.3279118.98217HepG2G3BP1
chr2024483172448367-3'-UTR,5'-UTR,CDS,intron-Distal4.9972823.74031HepG2DDX3X
chr2024483092448378-3'-UTR,5'-UTR,CDS,intron-Distal3.2601911.89286HepG2LARP4
chr2024482662448285-3'-UTR,5'-UTR,CDS,intron-Distal4.1721048.69575K562YBX3
chr2024482122448255-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.320157.53999HepG2AQR
chr2024513322451422-5'-UTR,CDS,intron-Distal,intron-Proximal3.094197.51848K562PUM2
chr2024513542451409-5'-UTR,intron-Distal,intron-Proximal5.3664916.52681K562GEMIN5
chr2024482632448309-3'-UTR,5'-UTR,CDS,intron-Distal3.5647010.01098HepG2LARP4
chr2024483742448405-5'-UTR,CDS,intron-Distal,intron-Proximal3.145965.62228HepG2G3BP1
chr2024483662448405-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.8104747.34561K562DDX3X
chr2024513332451433-5'-UTR,CDS,intron-Distal,intron-Proximal4.2470126.73429K562RPS3
chr2024482852448312-3'-UTR,5'-UTR,CDS,intron-Distal4.7177545.55716K562YBX3
chr2024513352451433-5'-UTR,CDS,intron-Distal,intron-Proximal4.2216022.91786HepG2RPS3
chr2024513332451347-5'-UTR,CDS,intron-Distal3.515146.76273HepG2G3BP1
chr2024513332451415-5'-UTR,CDS,intron-Distal,intron-Proximal3.5836712.66166K562DROSHA
chr2024482982448373-3'-UTR,5'-UTR,CDS,intron-Distal7.8393764.03973K562LIN28B
chr2024483692448429-5'-UTR,CDS,intron-Distal,intron-Proximal3.141144.87883K562BUD13
chr2024513322451432-5'-UTR,CDS,intron-Distal,intron-Proximal3.1390012.14695K562APOBEC3C
chr2024482622448266-3'-UTR,5'-UTR,CDS,intron-Distal4.3226537.15461K562YBX3
chr2024513312451360-5'-UTR,CDS,intron-Distal3.5490810.00757K562PABPC4
chr2024513602451431-5'-UTR,intron-Distal,intron-Proximal3.2383414.79043K562PABPC4
chr2024483662448412-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.344676.69747HepG2PRPF8
chr2024513332451352-5'-UTR,CDS,intron-Distal4.1726959.13414K562DDX3X
chr2024513522451429-5'-UTR,intron-Distal,intron-Proximal3.7567579.47586K562DDX3X
chr2024482652448299-3'-UTR,5'-UTR,CDS,intron-Distal3.953484.10177HepG2SUB1
chr2024513562451436-5'-UTR,intron-Distal,intron-Proximal3.783785.44376K562NCBP2
chr2024513442451432-5'-UTR,intron-Distal,intron-Proximal3.953668.47750K562EIF3G
chr2024483732448405-5'-UTR,CDS,intron-Distal,intron-Proximal3.304543.44876HepG2DDX3X
chr2024512162451402-5'-UTR,CDS,intron-Distal,intron-Proximal4.5482010.55900HepG2AQR
chr2024513332451424-5'-UTR,CDS,intron-Distal,intron-Proximal3.1601426.98758HepG2DDX55
chr2024483852448409-5'-UTR,CDS,intron-Distal,intron-Proximal3.598974.38394K562DROSHA
chr2024483772448427-5'-UTR,CDS,intron-Distal,intron-Proximal3.908277.44609HepG2AQR
chr2024483952448404-5'-UTR,CDS,intron-Distal3.452954.40261K562APOBEC3C
chr2024513442451413-5'-UTR,intron-Distal,intron-Proximal4.3055466.91144HepG2DDX3X
chr2024512882451335-5'-UTR,CDS,intron-Distal3.5068210.86331HepG2PRPF8
chr2024482522448292-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5745713.11699HepG2G3BP1
chr2024483252448370-3'-UTR,5'-UTR,CDS,intron-Distal4.2438228.40132HepG2LIN28B
chr2024513652451430-5'-UTR,intron-Distal,intron-Proximal3.4180522.74688HepG2LARP4
chr2024513322451365-5'-UTR,CDS,intron-Distal3.4343916.14522HepG2LARP4
chr2024482042448255-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.0692512.18707HepG2PRPF8
chr2024514092451435-5'-UTR,intron-Distal,intron-Proximal4.614134.79919K562GEMIN5
chr2024511952451263-intron-Distal4.761547.63242K562EFTUD2
chr2024443792444392-intron-Distal,intron-Proximal5.7538911.25363K562AQR
chr2024443522444379-intron-Distal,intron-Proximal4.8957911.12698K562AQR
chr2024436912443734-intron-Distal,intron-Proximal5.4479615.39065K562AQR
chr2024436412443664-intron-Distal,intron-Proximal4.020127.17192K562SSB
chr2024436302443682-intron-Distal,intron-Proximal4.60383400.00000HepG2NIP7
chr2024436112443651-intron-Distal,intron-Proximal3.4820457.52840HepG2DKC1
chr2024481522448212-intron-Distal,intron-Proximal5.6044311.77419HepG2AQR
chr2024480762448219-intron-Distal,intron-Proximal3.536358.82495K562EFTUD2
chr2024436352443663-intron-Distal,intron-Proximal5.15251400.00000HepG2NOLC1
chr2024511662451285-intron-Distal4.6466823.02395HepG2EFTUD2
chr2024480952448154-intron-Distal,intron-Proximal3.878176.99774HepG2EFTUD2
chr2024512642451297-intron-Distal3.574774.42776HepG2BUD13
chr2024436512443682-intron-Distal,intron-Proximal3.5359050.62941HepG2DKC1
chr2024443792444392-intron-Distal,intron-Proximal5.083525.90930HepG2AQR
chr2024443532444379-intron-Distal,intron-Proximal5.301576.90190HepG2AQR
chr2024481552448227-intron-Distal,intron-Proximal3.863233.05512HepG2PRPF4
chr2024508602450915-intron-Distal4.186414.13881HepG2PRPF4
chr2024484272448469-intron-Distal,intron-Proximal4.654204.27476HepG2AQR
chr2024436172443682-intron-Distal,intron-Proximal4.1937615.21605K562AATF
chr2024436352443662-intron-Distal,intron-Proximal4.3814323.85692HepG2LARP7
chr2024438962443965-intron-Distal,intron-Proximal5.692919.51601HepG2SF3B4
chr2024511462451270-intron-Distal3.204435.25094K562PRPF8
chr2024439082443965-intron-Distal,intron-Proximal5.0509310.52912K562SF3B4
chr2024511932451281-intron-Distal3.083927.06076HepG2PRPF4
chr2024481682448206-intron-Distal,intron-Proximal4.448844.83107HepG2EFTUD2
chr2024462932446353-intron-Distal,intron-Proximal3.185818.04193HepG2PRPF8
chr2024437062443733-intron-Distal,intron-Proximal4.235953.95187HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNRPB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNRPB is not available on ENCORE database.

  • 113 RBPs can affect the levels of SNRPB.  








The Knockdown/knockout RNA-Seq assay for SNRPB is not available on ENCORE database.





113 RBPs can affect the gene expression of SNRPB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNRPBENSG00000125835.132358.580503037.02060-0.364703.674602.44940HepG2AATF
SNRPBENSG00000125835.133753.526704676.72150-0.317305.505404.45790HepG2AKAP8L
SNRPBENSG00000125835.133365.444706424.06770-0.9327011.100309.60810HepG2ASCC1
SNRPBENSG00000125835.136399.113708066.20960-0.334007.291706.26370HepG2AUH
SNRPBENSG00000125835.132415.234403534.12170-0.549206.134804.85700HepG2BCLAF1
SNRPBENSG00000125835.131374.364702264.81570-0.7206013.9875012.48060HepG2CALR
SNRPBENSG00000125835.133755.051404653.73380-0.309605.667504.77790HepG2CKAP4
SNRPBENSG00000125835.131077.818401507.40490-0.484001.913101.33000HepG2CPSF6
SNRPBENSG00000125835.133132.098402441.135800.359505.454504.02500HepG2YBX3
SNRPBENSG00000125835.132230.475303109.91870-0.479503.363501.81270HepG2CSTF2T
SNRPBENSG00000125835.135138.518405698.94300-0.149301.999701.35350HepG2DAZAP1
SNRPBENSG00000125835.131818.810503349.90200-0.8811018.3664016.81240HepG2DDX21
SNRPBENSG00000125835.132318.344903278.84380-0.500107.568306.07110HepG2DDX24
SNRPBENSG00000125835.135733.479607436.91760-0.375302.810402.17990HepG2DDX3X
SNRPBENSG00000125835.131770.376402444.71750-0.465602.825001.45650HepG2DDX52
SNRPBENSG00000125835.132044.075903101.00090-0.601307.816206.20720HepG2DDX5
SNRPBENSG00000125835.131729.524102311.94530-0.418704.478903.24380HepG2DHX30
SNRPBENSG00000125835.132744.865504453.76030-0.6983010.584109.43500HepG2DKC1
SNRPBENSG00000125835.132032.153202916.25860-0.521103.069702.10160HepG2EEF2
SNRPBENSG00000125835.131790.675002430.57600-0.440802.373301.34890HepG2EFTUD2
SNRPBENSG00000125835.132343.067403085.36550-0.397002.649001.56960HepG2AGO1
SNRPBENSG00000125835.134179.306206141.32080-0.555304.378303.64220HepG2EIF2S1
SNRPBENSG00000125835.132587.986303163.91310-0.289902.984301.86680HepG2EIF3G
SNRPBENSG00000125835.133872.611606785.85510-0.809208.751107.61840HepG2EIF4A3
SNRPBENSG00000125835.133638.006105622.79800-0.6281020.3541018.52840HepG2EIF4G1
SNRPBENSG00000125835.132396.475303441.84740-0.522302.595901.53610HepG2ESF1
SNRPBENSG00000125835.133545.877009261.40030-1.38510105.72170103.06390HepG2ETF1
SNRPBENSG00000125835.132629.473303328.79060-0.340202.904701.60470HepG2FKBP4
SNRPBENSG00000125835.132690.395104177.22040-0.6347011.045909.52150HepG2FUBP3
SNRPBENSG00000125835.133920.954906352.51280-0.696107.341606.28170HepG2G3BP1
SNRPBENSG00000125835.134163.879406746.14120-0.696105.978704.65790HepG2G3BP2
SNRPBENSG00000125835.132409.305803538.81000-0.554605.750904.26880HepG2GNB2L1
SNRPBENSG00000125835.131070.320201708.53810-0.674703.178802.49800HepG2GPKOW
SNRPBENSG00000125835.132949.098902194.323600.426402.632101.30210HepG2HNRNPA0
SNRPBENSG00000125835.131383.897502420.02190-0.806308.281007.24930HepG2HNRNPA1
SNRPBENSG00000125835.133938.678605237.73870-0.411208.966307.46570HepG2HNRNPA2B1
SNRPBENSG00000125835.131481.550202691.80490-0.8615016.4179014.86780HepG2HNRNPC
SNRPBENSG00000125835.136106.679405191.145600.234205.469504.54960HepG2HNRNPL
SNRPBENSG00000125835.13857.295701630.50950-0.927505.139104.30870HepG2HNRNPLL
SNRPBENSG00000125835.131415.164802674.00990-0.9180034.5615032.63660HepG2HNRNPU
SNRPBENSG00000125835.134534.351706456.60930-0.509904.012303.21280HepG2IGF2BP2
SNRPBENSG00000125835.132437.273702731.41640-0.164402.424001.73240HepG2ILF2
SNRPBENSG00000125835.133794.672006495.33240-0.775408.369306.54090HepG2KHSRP
SNRPBENSG00000125835.131575.375602940.94000-0.900603.641402.20190HepG2KRR1
SNRPBENSG00000125835.134096.201506852.15400-0.742307.062806.03040HepG2MAGOH
SNRPBENSG00000125835.134388.860607051.88700-0.684206.747705.77720HepG2NCBP2
SNRPBENSG00000125835.136498.999505651.087500.201602.259001.57020HepG2NOL12
SNRPBENSG00000125835.133434.162906278.27870-0.8704010.611709.21870HepG2PABPC4
SNRPBENSG00000125835.134317.274406698.53840-0.6337022.9030021.43630HepG2PCBP1
SNRPBENSG00000125835.133035.904802385.007000.348005.102504.13030HepG2PPIL4
SNRPBENSG00000125835.131548.791903123.45430-1.0120041.3573039.12350HepG2PRPF4
SNRPBENSG00000125835.131905.930803084.33630-0.694509.844208.43230HepG2PRPF8
SNRPBENSG00000125835.133512.687306816.27530-0.9564047.8719046.20130HepG2PTBP1
SNRPBENSG00000125835.134422.234505722.48510-0.371904.140403.32760HepG2PUM2
SNRPBENSG00000125835.133299.210204741.69770-0.523309.436108.41190HepG2PUS1
SNRPBENSG00000125835.133883.681207381.63610-0.9265033.5219031.73600HepG2QKI
SNRPBENSG00000125835.134368.663707740.75180-0.8253030.9757029.60960HepG2RBM22
SNRPBENSG00000125835.134336.515306699.52020-0.627506.489105.49670HepG2RBM25
SNRPBENSG00000125835.134949.723907585.64230-0.6159021.8386020.60040HepG2NELFE
SNRPBENSG00000125835.135061.194607065.38980-0.4813014.0081012.78670HepG2RECQL
SNRPBENSG00000125835.132497.899003897.02300-0.641708.792807.68290HepG2RPLP0
SNRPBENSG00000125835.131100.014402303.54810-1.066309.462408.40740HepG2RPS19
SNRPBENSG00000125835.133119.508503856.41440-0.305902.565501.79350HepG2RPS2
SNRPBENSG00000125835.131795.747003050.95080-0.7647010.205808.83480HepG2RRP9
SNRPBENSG00000125835.132859.793502381.337100.264004.328703.55440HepG2SAFB2
SNRPBENSG00000125835.134827.664007096.15260-0.5557018.2468016.93500HepG2SF3B4
SNRPBENSG00000125835.137418.242808742.77920-0.237005.002004.38420HepG2SRFBP1
SNRPBENSG00000125835.133423.361007407.03880-1.1135075.6019073.90990HepG2SRSF1
SNRPBENSG00000125835.134262.878905326.57990-0.321405.952905.08610HepG2SRSF5
SNRPBENSG00000125835.133142.171303554.35300-0.177801.888101.30150HepG2SRSF7
SNRPBENSG00000125835.133618.250406026.18570-0.7360032.3963030.91310HepG2SRSF9
SNRPBENSG00000125835.133375.289007590.60120-1.1692076.5840074.83790HepG2SSB
SNRPBENSG00000125835.135055.649306057.61860-0.260905.259004.44950HepG2SUCLG1
SNRPBENSG00000125835.131668.191303981.18780-1.2549026.5816024.87890HepG2SUPV3L1
SNRPBENSG00000125835.132592.776706658.26740-1.3606073.2213070.84060HepG2TAF15
SNRPBENSG00000125835.131034.574001589.83290-0.619802.659801.94670HepG2TARDBP
SNRPBENSG00000125835.133675.585406117.47600-0.7350011.7633010.06990HepG2TIA1
SNRPBENSG00000125835.131715.742502598.38300-0.598805.323104.67580HepG2TIAL1
SNRPBENSG00000125835.133284.080002621.521900.325005.759704.99980HepG2TRIM56
SNRPBENSG00000125835.133331.086802351.616200.502204.795303.79050HepG2UCHL5
SNRPBENSG00000125835.131999.679503068.32100-0.6177018.9800017.47080HepG2UPF1
SNRPBENSG00000125835.134196.484602962.342100.5023014.3165013.11550HepG2UTP3
SNRPBENSG00000125835.132694.124103082.51340-0.194302.817902.14080HepG2ZC3H8
SNRPBENSG00000125835.132835.923603374.56450-0.250904.823104.15190HepG2ZNF622
SNRPBENSG00000125835.134403.209802623.730900.7468028.3998026.67830K562AGGF1
SNRPBENSG00000125835.133697.594802730.110600.437503.359402.63860K562AKAP8L
SNRPBENSG00000125835.13726.98090988.57270-0.443403.331702.37330K562BOP1
SNRPBENSG00000125835.13945.353201447.26520-0.614407.070705.19690K562CCAR1
SNRPBENSG00000125835.131881.826002414.80220-0.359804.086102.23250K562CEBPZ
SNRPBENSG00000125835.133012.860102596.159700.214702.315501.31240K562CPEB4
SNRPBENSG00000125835.135542.463406782.11640-0.291204.083502.88940K562CELF1
SNRPBENSG00000125835.13848.757301456.51940-0.779104.175201.51750K562DDX55
SNRPBENSG00000125835.131169.191501620.15420-0.470604.264602.55610K562DHX30
SNRPBENSG00000125835.131082.188601556.32310-0.524205.545103.63680K562DNAJC21
SNRPBENSG00000125835.13992.871401472.14220-0.568203.361202.24350K562EIF3A
SNRPBENSG00000125835.131737.242101384.864500.327003.699802.78930K562EIF3G
SNRPBENSG00000125835.131931.251702336.69370-0.274902.190201.45650K562EIF4A3
SNRPBENSG00000125835.134817.098405515.05360-0.195202.601201.68750K562EIF4G2
SNRPBENSG00000125835.132734.708302039.680900.422906.111804.03790K562EWSR1
SNRPBENSG00000125835.131154.464101481.56800-0.359903.349301.57220K562FASTKD2
SNRPBENSG00000125835.13798.321801497.27550-0.907308.483906.34150K562FKBP4
SNRPBENSG00000125835.13823.965001069.51530-0.376302.654501.81750K562FMR1
SNRPBENSG00000125835.133334.515302430.059200.456405.715704.89110K562FXR1
SNRPBENSG00000125835.13586.089301334.39460-1.1870014.2569012.37420K562G3BP2
SNRPBENSG00000125835.13775.969301003.55960-0.371102.745001.95350K562GPKOW
SNRPBENSG00000125835.13757.901701723.75630-1.1855027.8492026.03640K562HNRNPC
SNRPBENSG00000125835.133086.887602427.829400.346403.714502.46450K562HNRNPL
SNRPBENSG00000125835.133285.698604497.98170-0.453103.977602.89960K562HNRNPU
SNRPBENSG00000125835.133460.805102897.330700.256302.216901.48730K562KIF1C
SNRPBENSG00000125835.13424.98090856.93510-1.011809.726307.85990K562KRR1
SNRPBENSG00000125835.134663.539705878.34470-0.334003.533002.25550K562MSI2
SNRPBENSG00000125835.132292.771902594.27240-0.178202.594501.86860K562NSUN2
SNRPBENSG00000125835.131221.767302045.69010-0.743602.701101.48180K562PABPC1
SNRPBENSG00000125835.132731.102001881.398800.537602.303501.41710K562PABPN1
SNRPBENSG00000125835.132368.004501949.033000.280802.364901.46420K562PCBP2
SNRPBENSG00000125835.132040.539303082.94770-0.595406.520905.24200K562PCBP3
SNRPBENSG00000125835.131872.589302364.67220-0.336603.593002.67390K562POLR2G
SNRPBENSG00000125835.132988.840001900.780300.652902.409601.64660K562PPIG
SNRPBENSG00000125835.133345.575002066.637000.6949010.401108.93970K562PRPF8
SNRPBENSG00000125835.132786.532702128.499000.388504.715103.87070K562PTBP1
SNRPBENSG00000125835.135206.134106270.94460-0.268504.340303.13210K562PUM2
SNRPBENSG00000125835.134418.662602707.522900.7065011.4497010.39310K562PUS1
SNRPBENSG00000125835.133655.602702638.071300.470508.693707.66860K562RBM15
SNRPBENSG00000125835.131085.270302105.07420-0.9558013.3714011.55060K562RPS19
SNRPBENSG00000125835.13691.15940954.44900-0.465603.045802.02470K562SF3B1
SNRPBENSG00000125835.131775.746101387.045900.356303.792002.78540K562SF3B4
SNRPBENSG00000125835.131177.519201594.12260-0.437003.990502.45210K562SLBP
SNRPBENSG00000125835.131738.532601337.021600.378703.375602.21500K562SRFBP1
SNRPBENSG00000125835.132006.390602476.60540-0.303803.776102.39840K562SRSF7
SNRPBENSG00000125835.131970.313302691.50500-0.450006.697404.29840K562SRSF9
SNRPBENSG00000125835.132405.568502037.026900.239802.019801.32760K562TIA1
SNRPBENSG00000125835.132637.428301999.467900.399403.164401.98420K562TRA2A
SNRPBENSG00000125835.131119.417401335.47610-0.254602.081601.38620K562U2AF2
SNRPBENSG00000125835.132114.243402750.76970-0.379707.198606.10360K562UPF1
SNRPBENSG00000125835.131795.578502353.73440-0.390504.440803.32130K562WDR3
SNRPBENSG00000125835.133936.656605383.69390-0.451605.884204.55180K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNRPB is not available on ENCORE database.





26 RBPs can affect the splicing of SNRPB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESNRPBENSG00000125835.13chr20-244635324464652444392244454524513332451378-0.058000.000620.01362excludedHepG2U2AF1
SESNRPBENSG00000125835.13chr20-244635324464652444392244454524513332451378-0.073000.000760.01121excludedHepG2U2AF2
SESNRPBENSG00000125835.13chr20-2447837244796124463532446465244825224484040.069000.000000.00000includedK562HNRNPC
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.158000.000000.00943shorterK562GEMIN5
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.210000.000000.00260shorterK562GPKOW
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.173000.000010.06146shorterK562RPS3
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.215000.000000.00118shorterHepG2SLTM
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.162000.000010.00740shorterK562EIF3G
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.553000.000000.00000shorterHepG2HNRNPK
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.099000.000040.02042shorterHepG2AKAP1
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.083000.000070.06888shorterHepG2NOL12
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.265000.000000.00000shorterK562SUPV3L1
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.150000.000000.00030shorterK562FXR1
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.104000.000100.04893shorterHepG2IGF2BP3
A3SSSNRPBENSG00000125835.13chr20-244230524424692442305244243924432812443407-0.235000.000000.00000shorterHepG2DDX55
A3SSSNRPBENSG00000125835.13chr20-2442279244258524422792442439244328124434070.094000.000030.00845longerHepG2TAF15
A3SSSNRPBENSG00000125835.13chr20-2444392244463824443922444545244635324464650.108000.000000.00000longerK562AQR
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.129000.000000.00200shorterHepG2BCCIP
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.120000.000000.00298shorterHepG2DDX3X
A3SSSNRPBENSG00000125835.13chr20-2442279244258524422792442439244328124434070.108000.000010.01281longerHepG2SSB
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.146000.000020.01096shorterK562TARDBP
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.407000.000000.00000shorterK562HNRNPK
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.194000.000000.00003shorterK562SRSF1
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.232000.000000.00002shorterK562METAP2
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.140000.000000.00000shorterHepG2HNRNPL
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.142000.000000.00028shorterHepG2UCHL5
A3SSSNRPBENSG00000125835.13chr20-244227924425852442279244243924432812443407-0.135000.000000.00010shorterHepG2PCBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SNRPB is not avaliable on ENCORE database.