SLC25A23

General Information

Gene Name       : SLC25A23
Gene ID             : ENSG00000125648.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A23)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A23ENSG00000125648.1438.3247.7543.03ENCSR000AEF
HepG2SLC25A23ENSG00000125648.1424.5221.2722.89ENCSR985KAT
K562SLC25A23ENSG00000125648.1446.4347.4446.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A23 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A23 RNA is bound by 14 proteins.  







eCLIP assay for SLC25A23 is not avaliable on ENCORE database.





14 proteins are bound to SLC25A23 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1964412426441292-3'-UTR,intron-Distal,intron-Proximal3.713898.16517K562IGF2BP2
chr1964415206441612-3'-UTR,intron-Distal5.1026521.61236K562IGF2BP2
chr1964416466441666-3'-UTR,intron-Distal4.445548.98739K562IGF2BP2
chr1964410496441088-3'-UTR,intron-Distal3.672386.98354K562IGF2BP2
chr1964415756441658-3'-UTR,intron-Distal5.042736.13324HepG2IGF2BP1
chr1964415566441686-3'-UTR,intron-Distal5.1604611.49570HepG2DDX59
chr1964410886441123-3'-UTR,intron-Distal4.8713112.05835K562IGF2BP2
chr1964402776440326-3'-UTR,intron-Distal5.0695915.91473K562IGF2BP2
chr1964412466441411-3'-UTR,CDS,intron-Distal,intron-Proximal3.162926.64722K562IGF2BP1
chr1964416976441740-3'-UTR,intron-Distal5.237505.53421K562PCBP1
chr1964411536441215-3'-UTR,intron-Distal4.4291413.85330K562IGF2BP2
chr1964415676441663-3'-UTR,intron-Distal3.9317813.88679K562PCBP1
chr1964416686441744-3'-UTR,intron-Distal4.817375.76838K562IGF2BP1
chr1964411236441153-3'-UTR,intron-Distal5.8398411.77010K562IGF2BP2
chr1964415216441610-3'-UTR,intron-Distal4.071643.34232HepG2PCBP2
chr1964411586441210-3'-UTR,intron-Distal3.394306.71887K562TIA1
chr1964414236441520-3'-UTR,CDS,intron-Distal,intron-Proximal6.4529821.82915K562IGF2BP2
chr1964413356441410-3'-UTR,CDS,intron-Distal,intron-Proximal3.153055.20254K562IGF2BP2
chr1964415956441652-3'-UTR,intron-Distal3.948715.07173K562HNRNPK
chr1964414856441557-3'-UTR,CDS,intron-Distal4.925127.33375K562IGF2BP1
chr1964409046440983-3'-UTR,intron-Distal4.189716.55932K562IGF2BP1
chr1964416126441646-3'-UTR,intron-Distal5.1431714.13936K562IGF2BP2
chr1964408166440860-3'-UTR,intron-Distal4.293428.00923K562IGF2BP2
chr1964416266441666-3'-UTR,intron-Distal3.576773.41711K562DROSHA
chr1964596816459765-5'-UTR,intron-Distal,intron-Proximal7.5632130.90104HepG2DDX3X
chr1964595076459720-5'-UTR,CDS,intron-Distal3.638224.36276HepG2LARP4
chr1964595456459704-5'-UTR,CDS,intron-Distal5.6639011.37564K562GEMIN5
chr1964595676459681-5'-UTR,CDS,intron-Distal4.4868725.83866HepG2DDX3X
chr1964574636457518-CDS,intron-Distal,intron-Proximal3.874884.98250K562AQR
chr1964442416444311-CDS,intron-Distal,intron-Proximal3.455327.24294K562YBX3
chr1964575126457524-CDS,intron-Distal,intron-Proximal3.343258.31323K562YBX3
chr1964420786442123-CDS,intron-Distal3.366864.93097K562YBX3
chr1964575246457551-CDS,intron-Distal3.8956012.15043K562YBX3
chr1964420806442135-CDS,intron-Distal4.148423.71984K562METAP2
chr1964575516457601-CDS,intron-Distal3.9993211.49162K562YBX3
chr1964544106454486-CDS,intron-Distal,intron-Proximal3.157384.94039K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A23 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A23 is not available on ENCORE database.

  • 116 RBPs can affect the levels of SLC25A23.  








The Knockdown/knockout RNA-Seq assay for SLC25A23 is not available on ENCORE database.





116 RBPs can affect the gene expression of SLC25A23 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A23ENSG00000125648.10687.43180984.07870-0.517604.728203.36090HepG2AATF
SLC25A23ENSG00000125648.10857.965501322.90120-0.6247012.9865011.87280HepG2ACO1
SLC25A23ENSG00000125648.10889.672401842.04380-1.0500014.2102013.10330HepG2AKAP1
SLC25A23ENSG00000125648.101091.666401329.01480-0.283803.041502.24140HepG2AKAP8L
SLC25A23ENSG00000125648.101344.441902569.37160-0.9344018.2132016.87830HepG2BOP1
SLC25A23ENSG00000125648.102868.737302358.859800.282202.038201.43800HepG2CPSF6
SLC25A23ENSG00000125648.101152.669502116.32030-0.8766017.6388015.14070HepG2CPSF7
SLC25A23ENSG00000125648.10990.366401574.82530-0.6692012.9152011.72490HepG2CELF1
SLC25A23ENSG00000125648.101631.658701223.437800.415307.594606.32780HepG2DDX19B
SLC25A23ENSG00000125648.10836.122301117.35220-0.418304.652203.17120HepG2DDX1
SLC25A23ENSG00000125648.10867.202301764.39060-1.0247015.5441014.18200HepG2DDX3X
SLC25A23ENSG00000125648.101135.732301515.99650-0.416602.787702.16760HepG2DDX6
SLC25A23ENSG00000125648.101731.316101265.626300.451907.417806.40980HepG2DKC1
SLC25A23ENSG00000125648.101284.197601887.07720-0.555305.191302.68360HepG2EIF3H
SLC25A23ENSG00000125648.10965.051401292.60220-0.421604.187903.16060HepG2EWSR1
SLC25A23ENSG00000125648.10804.125501584.16880-0.9782013.048909.81620HepG2FMR1
SLC25A23ENSG00000125648.10422.314701472.07280-1.801508.717607.36580HepG2FUBP3
SLC25A23ENSG00000125648.10707.957701015.22150-0.520104.406303.11310HepG2GNB2L1
SLC25A23ENSG00000125648.101856.310802674.05190-0.526604.929204.09040HepG2GPKOW
SLC25A23ENSG00000125648.101953.926201666.529500.229402.132401.49640HepG2HNRNPF
SLC25A23ENSG00000125648.10968.012101526.69910-0.657307.861806.73160HepG2HNRNPK
SLC25A23ENSG00000125648.101223.042001542.22030-0.334504.775303.90760HepG2HNRNPL
SLC25A23ENSG00000125648.101345.055801790.41840-0.412604.617503.42100HepG2HNRNPM
SLC25A23ENSG00000125648.101559.593401248.463200.320904.312003.41670HepG2ILF2
SLC25A23ENSG00000125648.10979.294601625.50770-0.731106.798905.78490HepG2MAGOH
SLC25A23ENSG00000125648.101667.694402100.13150-0.332603.285302.40760HepG2MSI2
SLC25A23ENSG00000125648.10648.687801672.95830-1.3668024.9814023.21280HepG2NCBP2
SLC25A23ENSG00000125648.10684.63070899.42870-0.393703.071501.58200HepG2NIP7
SLC25A23ENSG00000125648.101418.613201678.88930-0.243001.944701.30280HepG2NOL12
SLC25A23ENSG00000125648.10469.02720671.73610-0.518202.243401.45800HepG2PABPC1
SLC25A23ENSG00000125648.101157.334301489.57100-0.364102.516601.82500HepG2PABPC4
SLC25A23ENSG00000125648.101012.394501209.76880-0.257002.446901.64570HepG2PARN
SLC25A23ENSG00000125648.101042.340701652.84250-0.6651014.8014013.57820HepG2PCBP1
SLC25A23ENSG00000125648.101383.085501090.127100.343302.516201.80990HepG2PPIL4
SLC25A23ENSG00000125648.102564.807801994.640100.362605.929104.84090HepG2PRPF4
SLC25A23ENSG00000125648.10307.64140825.06300-1.423307.395706.15050HepG2PRPF8
SLC25A23ENSG00000125648.102386.689001602.708000.574408.605807.63090HepG2PUF60
SLC25A23ENSG00000125648.101154.915601701.41690-0.5589012.9506011.86570HepG2PUM1
SLC25A23ENSG00000125648.101337.364801700.12960-0.346303.354502.61750HepG2PUM2
SLC25A23ENSG00000125648.101725.643601347.442800.356805.587104.76790HepG2PUS1
SLC25A23ENSG00000125648.10353.196901104.93800-1.6454016.9997015.39690HepG2RAVER1
SLC25A23ENSG00000125648.101867.272502597.31390-0.476105.238304.10300HepG2RBM15
SLC25A23ENSG00000125648.101198.054301732.79800-0.532408.714607.91390HepG2RBM22
SLC25A23ENSG00000125648.102287.480401172.166600.964503.129101.40210HepG2RBM39
SLC25A23ENSG00000125648.101612.203001871.72270-0.215302.164301.67400HepG2NELFE
SLC25A23ENSG00000125648.101288.810101034.454000.317102.505301.91780HepG2RPS19
SLC25A23ENSG00000125648.101017.21980738.271400.462302.656101.87210HepG2RPS3A
SLC25A23ENSG00000125648.10848.897401129.28760-0.411803.493002.28120HepG2RPS5
SLC25A23ENSG00000125648.10517.34590816.09600-0.657602.741501.95780HepG2RRP9
SLC25A23ENSG00000125648.10477.64080695.19900-0.541503.278101.85940HepG2SART3
SLC25A23ENSG00000125648.101311.495801038.188700.337002.379701.50480HepG2SERBP1
SLC25A23ENSG00000125648.10781.836802368.77810-1.5992027.3979025.22450HepG2SF3A3
SLC25A23ENSG00000125648.101247.173702525.92290-1.0181020.5308018.80500HepG2SF3B1
SLC25A23ENSG00000125648.101239.211501750.97870-0.498708.756907.79590HepG2SF3B4
SLC25A23ENSG00000125648.102251.326901150.747800.968103.465801.96090HepG2SNRNP200
SLC25A23ENSG00000125648.101069.119202810.51130-1.3944018.2640016.30100HepG2SNRNP70
SLC25A23ENSG00000125648.101520.741801957.13350-0.364006.164805.49870HepG2SRFBP1
SLC25A23ENSG00000125648.101098.471701827.66450-0.7345018.7172017.71600HepG2SRSF1
SLC25A23ENSG00000125648.101552.898402717.73680-0.807408.781606.91590HepG2SRSF3
SLC25A23ENSG00000125648.10950.030701582.52650-0.7362016.4954015.14630HepG2SRSF5
SLC25A23ENSG00000125648.10942.942201486.92120-0.6571014.5163013.43170HepG2SRSF9
SLC25A23ENSG00000125648.101948.947901699.258600.197702.089801.62810HepG2SSB
SLC25A23ENSG00000125648.10730.115501032.67940-0.500202.655301.47830HepG2SUB1
SLC25A23ENSG00000125648.101402.129401799.69510-0.360105.560904.73530HepG2SUCLG1
SLC25A23ENSG00000125648.10507.636001065.34200-1.069504.643103.80150HepG2SUPV3L1
SLC25A23ENSG00000125648.103343.115302487.034100.426703.633302.81690HepG2TARDBP
SLC25A23ENSG00000125648.10475.73420713.94970-0.585702.303001.38740HepG2TFIP11
SLC25A23ENSG00000125648.10945.421301198.24670-0.341904.165603.50170HepG2TRIM56
SLC25A23ENSG00000125648.101274.592601565.89480-0.297002.059301.31650HepG2TUFM
SLC25A23ENSG00000125648.101496.169002219.88380-0.569206.992406.00310HepG2U2AF1
SLC25A23ENSG00000125648.10301.59600629.20500-1.060904.540203.56500HepG2UCHL5
SLC25A23ENSG00000125648.102918.939902100.750100.4744011.6854010.42910HepG2UPF1
SLC25A23ENSG00000125648.101472.884402028.18240-0.461506.661805.80100HepG2UTP3
SLC25A23ENSG00000125648.101480.450401968.44150-0.411006.827905.84970HepG2ZC3H8
SLC25A23ENSG00000125648.10348.584102310.41440-2.72860111.67910109.59230HepG2ZNF622
SLC25A23ENSG00000125648.101865.444402507.98700-0.427004.715903.12990K562AARS
SLC25A23ENSG00000125648.103260.690005683.49180-0.801602.810501.57680K562ABCF1
SLC25A23ENSG00000125648.101329.167001675.58400-0.334104.178002.28840K562AKAP1
SLC25A23ENSG00000125648.103074.879203858.22940-0.327403.067201.75930K562APOBEC3C
SLC25A23ENSG00000125648.101176.501803012.69570-1.3566035.4779033.58270K562AQR
SLC25A23ENSG00000125648.102391.479804716.67980-0.979908.970807.34540K562BOP1
SLC25A23ENSG00000125648.103410.821102331.909100.548506.917505.08000K562CCAR1
SLC25A23ENSG00000125648.103707.352805015.27770-0.435906.528505.32110K562CPSF6
SLC25A23ENSG00000125648.101033.113201366.81330-0.403804.646303.22360K562CSTF2
SLC25A23ENSG00000125648.103747.932305376.71210-0.5206010.408108.58340K562CELF1
SLC25A23ENSG00000125648.101199.750901579.58080-0.396805.864303.93860K562DDX27
SLC25A23ENSG00000125648.101392.845801697.71510-0.285602.441801.46540K562DDX3X
SLC25A23ENSG00000125648.103146.346505096.53130-0.6958024.9074023.14230K562DDX47
SLC25A23ENSG00000125648.101204.572201822.79610-0.597605.263603.45930K562EEF2
SLC25A23ENSG00000125648.101160.133801760.98530-0.602107.333805.78180K562EFTUD2
SLC25A23ENSG00000125648.102117.504402683.51730-0.341805.023204.09480K562EIF2S2
SLC25A23ENSG00000125648.101205.055902371.89860-0.976903.840502.63230K562EIF3A
SLC25A23ENSG00000125648.101405.699201773.65050-0.335402.870602.03400K562EIF4A3
SLC25A23ENSG00000125648.103361.156604372.57100-0.379507.071405.58580K562EIF4G2
SLC25A23ENSG00000125648.103309.796205102.74460-0.624503.439802.48270K562FMR1
SLC25A23ENSG00000125648.102388.777804324.95750-0.8564014.2081012.00290K562FTO
SLC25A23ENSG00000125648.101279.292601673.25590-0.387304.703802.27850K562FUBP3
SLC25A23ENSG00000125648.101568.282901844.51450-0.234102.387001.81750K562FXR1
SLC25A23ENSG00000125648.10584.571901114.60950-0.931107.647306.34890K562G3BP2
SLC25A23ENSG00000125648.101361.090301765.53930-0.375302.943701.47110K562GEMIN5
SLC25A23ENSG00000125648.102505.250803672.34600-0.5517011.902209.71640K562GLRX3
SLC25A23ENSG00000125648.103089.404204788.43100-0.6322010.878209.28090K562GPKOW
SLC25A23ENSG00000125648.102396.370703575.94310-0.577509.460208.03750K562GRSF1
SLC25A23ENSG00000125648.102202.454802744.13090-0.317203.163902.53140K562HNRNPC
SLC25A23ENSG00000125648.101111.515801743.54630-0.649503.266601.91230K562HNRNPK
SLC25A23ENSG00000125648.102501.965203043.04320-0.282503.370602.38680K562HNRNPU
SLC25A23ENSG00000125648.103519.230205538.53210-0.654202.197101.48660K562HSPD1
SLC25A23ENSG00000125648.103172.815603944.32390-0.314003.108602.23010K562KIF1C
SLC25A23ENSG00000125648.103530.768602783.277000.343102.932601.43270K562LIN28B
SLC25A23ENSG00000125648.103640.499204418.63230-0.279502.748401.84370K562MBNL1
SLC25A23ENSG00000125648.102818.418804674.01130-0.729807.930206.40620K562METAP2
SLC25A23ENSG00000125648.103598.388604660.67540-0.373204.139802.75850K562MSI2
SLC25A23ENSG00000125648.103046.951903860.94580-0.341606.260405.08580K562MTPAP
SLC25A23ENSG00000125648.101099.661801771.15500-0.6876012.041009.56740K562NCBP2
SLC25A23ENSG00000125648.103793.996504782.97420-0.334203.231501.60180K562NOL12
SLC25A23ENSG00000125648.103484.573404290.12230-0.300004.642203.70720K562NSUN2
SLC25A23ENSG00000125648.10939.035401632.52510-0.797904.101802.90500K562PCBP2
SLC25A23ENSG00000125648.102522.626203693.34980-0.550004.421903.37170K562PCBP3
SLC25A23ENSG00000125648.101822.717402832.75300-0.636105.054403.96880K562POLR2G
SLC25A23ENSG00000125648.10742.193501713.64980-1.2072023.6893021.48170K562PRPF8
SLC25A23ENSG00000125648.103066.805802460.414400.317702.982202.03810K562PSIP1
SLC25A23ENSG00000125648.103692.879504770.76440-0.369504.498303.46260K562PUF60
SLC25A23ENSG00000125648.103549.484404971.95080-0.4862011.015009.08960K562PUM2
SLC25A23ENSG00000125648.10624.549201063.39130-0.767802.951501.48090K562RAVER1
SLC25A23ENSG00000125648.10768.336201056.82450-0.459904.663102.85870K562RBM25
SLC25A23ENSG00000125648.102749.721502244.874600.292602.940601.91660K562RCC2
SLC25A23ENSG00000125648.10982.607401745.30800-0.8288010.177108.59360K562RPS19
SLC25A23ENSG00000125648.101366.667502287.85990-0.743303.262201.92800K562SF1
SLC25A23ENSG00000125648.102164.581004232.86190-0.9675031.9302029.53610K562SF3A3
SLC25A23ENSG00000125648.102497.156704553.69470-0.8668012.3270010.19630K562SF3B1
SLC25A23ENSG00000125648.10679.032101158.63080-0.7709012.7619010.83540K562SF3B4
SLC25A23ENSG00000125648.103132.868004336.62290-0.4691010.580008.88600K562SRPK2
SLC25A23ENSG00000125648.101046.106701351.24500-0.369304.233002.60090K562SSB
SLC25A23ENSG00000125648.10781.855401658.75940-1.0851016.8256014.31640K562SUPV3L1
SLC25A23ENSG00000125648.103202.761102366.499200.436504.040102.89390K562TIAL1
SLC25A23ENSG00000125648.10646.664901080.00610-0.739907.266105.33550K562U2AF1
SLC25A23ENSG00000125648.10572.837601115.54620-0.9616018.0249015.91960K562U2AF2
SLC25A23ENSG00000125648.101362.768801755.80470-0.365602.972401.90910K562UCHL5
SLC25A23ENSG00000125648.103431.993504548.88660-0.406504.981404.04810K562UPF1
SLC25A23ENSG00000125648.103086.761504943.75010-0.679508.542206.53480K562UTP3
SLC25A23ENSG00000125648.103172.224203892.37280-0.295203.100802.17590K562WDR3
SLC25A23ENSG00000125648.102949.421904047.38110-0.456606.264105.04380K562WDR43
SLC25A23ENSG00000125648.102613.757403393.82910-0.376804.006402.93510K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A23 is not available on ENCORE database.





9 RBPs can affect the splicing of SLC25A23 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A23ENSG00000125648.10chr19-6455962645610364545696454728645643064565420.067000.003640.09684includedK562PRPF8
SESLC25A23ENSG00000125648.10chr19-645399164540996444161644431264543336454486-0.182000.001680.05468excludedK562PRPF8
SESLC25A23ENSG00000125648.10chr19-6438734643883264384576438545644416164442900.526000.003080.07327includedK562AKAP8L
SESLC25A23ENSG00000125648.10chr19-645399164540996444161644431264543336454486-0.120000.000900.01121excludedK562AQR
SESLC25A23ENSG00000125648.10chr19-645596264561036454569645472864564306456542-0.054000.000460.04578excludedHepG2SRSF7
SESLC25A23ENSG00000125648.10chr19-643873464388326438457643854564441616444290-0.403000.000400.02264excludedK562HNRNPK
SESLC25A23ENSG00000125648.10chr19-645399164540996444161644431264543336454486-0.185000.000830.01659excludedK562HNRNPC
MXESLC25A23ENSG00000125648.10chr19-64523226452490645399164540996444161644431264543336454486-0.169000.001050.030442includedHepG2MATR3
MXESLC25A23ENSG00000125648.10chr19-64523226452490645399164540996444161644431264543336454486-0.169000.002080.054512includedK562UCHL5
MXESLC25A23ENSG00000125648.10chr19-64523226452490645399164540996444161644431264543336454486-0.247000.000030.001792includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A23 is not avaliable on ENCORE database.