RNF44

General Information

Gene Name       : RNF44
Gene ID             : ENSG00000146083.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNF44)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNF44ENSG00000146083.113.277.105.18ENCSR000AEF
HepG2RNF44ENSG00000146083.1128.4511.4719.96ENCSR985KAT
K562RNF44ENSG00000146083.1128.3613.8221.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNF44 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RNF44 RNA is bound by 41 proteins.  







eCLIP assay for RNF44 is not avaliable on ENCORE database.





41 proteins are bound to RNF44 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5175958584175958632-3'-UTR,CDS,intron-Distal,intron-Proximal4.273804.25090K562IGF2BP2
chr5175957635175957652-3'-UTR,CDS,intron-Distal,intron-Proximal7.2678022.28433HepG2PCBP2
chr5175954164175954222-3'-UTR,intron-Distal4.571295.90266HepG2IGF2BP1
chr5175956809175956819-3'-UTR,CDS,intron-Distal,intron-Proximal3.143543.28764HepG2LARP4
chr5175955410175955500-3'-UTR,intron-Distal4.6624412.77891HepG2AKAP1
chr5175957148175957197-3'-UTR,CDS,intron-Distal4.614036.99355K562LIN28B
chr5175957023175957112-3'-UTR,CDS,intron-Distal,intron-Proximal4.3818526.00304K562PRPF8
chr5175956799175956888-3'-UTR,CDS,intron-Distal,intron-Proximal3.5343216.88917HepG2EFTUD2
chr5175957994175958032-3'-UTR,CDS,intron-Distal,intron-Proximal4.2041211.58353K562AQR
chr5175957044175957089-3'-UTR,CDS,intron-Distal,intron-Proximal4.8619938.53960HepG2PRPF8
chr5175957081175957113-3'-UTR,CDS,intron-Distal,intron-Proximal5.434559.67229HepG2PCBP2
chr5175956249175956297-3'-UTR,CDS,intron-Distal,intron-Proximal4.1848811.01649K562PRPF8
chr5175958601175958645-3'-UTR,CDS,intron-Distal,intron-Proximal3.274293.87732K562U2AF1
chr5175953861175953946-3'-UTR,intron-Distal4.284116.46185HepG2FUBP3
chr5175955674175955747-3'-UTR,intron-Distal5.1934032.86210HepG2UPF1
chr5175956084175956137-3'-UTR,CDS,intron-Distal4.0370610.42568K562SMNDC1
chr5175955003175955083-3'-UTR,intron-Distal5.4979039.29661K562UPF1
chr5175953965175954005-3'-UTR,intron-Distal3.875773.08510HepG2ZC3H11A
chr5175955912175955958-3'-UTR,intron-Distal,intron-Proximal3.6218914.62331HepG2EFTUD2
chr5175958973175959006-3'-UTR,CDS,intron-Distal,intron-Proximal3.606213.59112HepG2PPIG
chr5175955191175955231-3'-UTR,intron-Distal5.3380917.60288K562UPF1
chr5175956080175956121-3'-UTR,CDS,intron-Distal3.677996.94346HepG2BUD13
chr5175954697175954750-3'-UTR,intron-Distal5.060296.65399HepG2AKAP1
chr5175956527175956563-3'-UTR,CDS,intron-Distal4.021914.96634HepG2PPIG
chr5175955018175955096-3'-UTR,intron-Distal3.530807.69474HepG2RBFOX2
chr5175955719175955753-3'-UTR,intron-Distal3.497833.45841K562HNRNPK
chr5175955105175955166-3'-UTR,intron-Distal5.6467912.24108HepG2AKAP1
chr5175953771175953830-3'-UTR,intron-Distal5.483698.03171K562ZC3H11A
chr5175956584175956651-3'-UTR,CDS,intron-Distal,intron-Proximal4.0412811.64759HepG2PPIG
chr5175954685175954763-3'-UTR,intron-Distal3.1684813.36859HepG2DDX59
chr5175956791175956846-3'-UTR,CDS,intron-Distal,intron-Proximal4.8003754.89657K562SF3B4
chr5175953849175953892-3'-UTR,intron-Distal6.011969.28899K562PABPC4
chr5175955100175955166-3'-UTR,intron-Distal4.8018359.21122K562UPF1
chr5175958621175958657-3'-UTR,CDS,intron-Distal,intron-Proximal4.8923410.08262K562AQR
chr5175953775175953847-3'-UTR,intron-Distal3.771577.17500HepG2FUBP3
chr5175954353175954423-3'-UTR,intron-Distal4.0493129.69075K562UPF1
chr5175953731175953762-3'-UTR,intron-Distal4.440083.66896HepG2FUBP3
chr5175958604175958629-3'-UTR,CDS,intron-Distal3.201694.96240HepG2DDX59
chr5175955896175955939-3'-UTR,intron-Distal,intron-Proximal3.806219.22287HepG2UPF1
chr5175954722175954743-3'-UTR,intron-Distal4.9345515.84155HepG2HNRNPK
chr5175955500175955566-3'-UTR,intron-Distal5.067198.32932HepG2AKAP1
chr5175958586175958658-3'-UTR,CDS,intron-Distal,intron-Proximal3.5874411.09224K562BUD13
chr5175955460175955535-3'-UTR,intron-Distal5.1296715.97458HepG2UPF1
chr5175955667175955774-3'-UTR,intron-Distal4.9088122.07205HepG2AKAP1
chr5175957077175957106-3'-UTR,CDS,intron-Distal,intron-Proximal3.296353.72310K562HNRNPK
chr5175956080175956125-3'-UTR,CDS,intron-Distal5.2644610.93557HepG2EFTUD2
chr5175957592175957645-3'-UTR,CDS,intron-Distal,intron-Proximal4.622015.80053HepG2LARP4
chr5175956816175956869-3'-UTR,CDS,intron-Distal,intron-Proximal3.648264.51000K562SMNDC1
chr5175958961175959010-3'-UTR,CDS,intron-Distal,intron-Proximal3.006069.45851HepG2PRPF8
chr5175958940175959014-3'-UTR,CDS,intron-Distal,intron-Proximal3.9969018.43638HepG2EFTUD2
chr5175955747175955771-3'-UTR,intron-Distal5.7233711.83696HepG2UPF1
chr5175955617175955640-3'-UTR,intron-Distal3.7640710.02205K562UPF1
chr5175954698175954749-3'-UTR,intron-Distal4.0036115.09755HepG2PCBP2
chr5175956080175956134-3'-UTR,CDS,intron-Distal6.2929216.97896HepG2SF3A3
chr5175954372175954422-3'-UTR,intron-Distal4.786936.78870K562HNRNPK
chr5175954700175954722-3'-UTR,intron-Distal3.7573510.77057HepG2HNRNPK
chr5175955773175955840-3'-UTR,intron-Distal3.108263.38121HepG2IGF2BP3
chr5175956777175956820-3'-UTR,CDS,intron-Distal,intron-Proximal3.544784.97070HepG2PCBP2
chr5175957652175957696-3'-UTR,CDS,intron-Distal,intron-Proximal4.959679.62214HepG2PCBP2
chr5175956042175956082-3'-UTR,CDS,intron-Distal,intron-Proximal4.959889.56916K562SF3B4
chr5175957849175957881-3'-UTR,CDS,intron-Distal,intron-Proximal3.381645.02497HepG2DDX59
chr5175956082175956135-3'-UTR,CDS,intron-Distal6.4290628.99197K562SF3B4
chr5175955075175955168-3'-UTR,intron-Distal3.2854910.45781K562AKAP1
chr5175955796175955837-3'-UTR,intron-Distal3.186933.19579K562HNRNPK
chr5175954917175954948-3'-UTR,intron-Distal4.280584.25109HepG2AKAP1
chr5175957708175957744-3'-UTR,CDS,intron-Distal,intron-Proximal3.052156.17838K562ZNF622
chr5175956599175956645-3'-UTR,CDS,intron-Distal,intron-Proximal3.628076.77066K562UCHL5
chr5175958965175959006-3'-UTR,CDS,intron-Distal,intron-Proximal3.809373.67894HepG2AQR
chr5175957848175957854-3'-UTR,CDS,intron-Distal,intron-Proximal4.315943.51789K562IGF2BP2
chr5175954489175954570-3'-UTR,intron-Distal3.6593325.12675K562PUM2
chr5175956648175956747-3'-UTR,CDS,intron-Distal,intron-Proximal3.6052913.79463HepG2PRPF8
chr5175953782175953839-3'-UTR,intron-Distal3.679444.95741HepG2ZC3H11A
chr5175959368175959518-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1961420.15185HepG2DDX3X
chr5175955091175955168-3'-UTR,intron-Distal4.7432321.09488HepG2UPF1
chr5175954362175954410-3'-UTR,intron-Distal3.650165.85178HepG2IGF2BP1
chr5175955684175955742-3'-UTR,intron-Distal3.888548.10945K562AKAP1
chr5175953842175953958-3'-UTR,intron-Distal3.627788.67954K562KHSRP
chr5175953788175953897-3'-UTR,intron-Distal4.6546421.76955K562PUM2
chr5175954575175954607-3'-UTR,intron-Distal3.324254.14725HepG2DDX59
chr5175957854175957877-3'-UTR,CDS,intron-Distal,intron-Proximal3.226704.37904K562IGF2BP2
chr5175954917175954944-3'-UTR,intron-Distal4.161504.53890K562PCBP1
chr5175957975175958020-3'-UTR,CDS,intron-Distal3.236894.15212HepG2DDX59
chr5175957046175957087-3'-UTR,CDS,intron-Distal,intron-Proximal4.049053.14999HepG2GRWD1
chr5175954699175954792-3'-UTR,intron-Distal4.9305312.95348K562PCBP1
chr5175954427175954482-3'-UTR,intron-Distal3.799485.88582HepG2PCBP2
chr5175955485175955518-3'-UTR,intron-Distal5.250578.17882K562FAM120A
chr5175957082175957100-3'-UTR,CDS,intron-Distal,intron-Proximal3.742485.59712K562ILF3
chr5175957089175957110-3'-UTR,CDS,intron-Distal4.6828819.73018HepG2PRPF8
chr5175955702175955745-3'-UTR,intron-Distal3.392175.36626HepG2EFTUD2
chr5175957591175957649-3'-UTR,CDS,intron-Distal,intron-Proximal3.471073.19579K562HNRNPK
chr5175955688175955760-3'-UTR,intron-Distal4.292719.31157K562PCBP1
chr5175957059175957106-3'-UTR,CDS,intron-Distal,intron-Proximal4.5539712.86373HepG2DDX59
chr5175957979175958022-3'-UTR,CDS,intron-Distal4.037977.93174K562YBX3
chr5175955765175955835-3'-UTR,intron-Distal3.1415815.86796K562UPF1
chr5175954211175954248-3'-UTR,intron-Distal4.3076516.16162K562UPF1
chr5175957924175957952-3'-UTR,CDS,intron-Distal,intron-Proximal4.520414.42259HepG2DDX59
chr5175955022175955091-3'-UTR,intron-Distal4.9769218.92797HepG2UPF1
chr5175957904175957983-3'-UTR,CDS,intron-Distal,intron-Proximal3.375736.31035K562IGF2BP2
chr5175957848175957883-3'-UTR,CDS,intron-Distal,intron-Proximal4.460445.00478HepG2PCBP2
chr5175954558175954620-3'-UTR,intron-Distal3.210064.92519HepG2IGF2BP1
chr5175958462175958490-3'-UTR,CDS,intron-Distal,intron-Proximal3.966554.59413K562PCBP1
chr5175954402175954469-3'-UTR,intron-Distal3.710656.84506HepG2HNRNPK
chr5175954749175954792-3'-UTR,intron-Distal4.4806810.39320HepG2PCBP2
chr5175957723175957746-3'-UTR,CDS,intron-Distal,intron-Proximal4.016766.58258HepG2PCBP2
chr5175955672175955765-3'-UTR,intron-Distal3.9157826.59459K562UPF1
chr5175955087175955163-3'-UTR,intron-Distal3.1988016.50633K562FAM120A
chr5175955015175955088-3'-UTR,intron-Distal3.666287.51661K562RBFOX2
chr5175956084175956138-3'-UTR,CDS,intron-Distal4.8900412.35741K562PRPF8
chr5175958000175958086-3'-UTR,CDS,intron-Distal,intron-Proximal5.209724.62947HepG2AQR
chr5175957938175957980-3'-UTR,CDS,intron-Distal4.601727.70131HepG2PCBP2
chr5175954576175954619-3'-UTR,intron-Distal3.642075.58194HepG2HNRNPK
chr5175954672175954727-3'-UTR,intron-Distal3.944906.59266K562DROSHA
chr5175957606175957724-3'-UTR,CDS,intron-Distal,intron-Proximal3.192304.74199K562PUM1
chr5175955771175955852-3'-UTR,intron-Distal,intron-Proximal5.4178934.98205HepG2UPF1
chr5175957723175957744-3'-UTR,CDS,intron-Distal,intron-Proximal3.278323.12941K562UCHL5
chr5175954697175954762-3'-UTR,intron-Distal3.9490432.25573K562UPF1
chr5175957035175957103-3'-UTR,CDS,intron-Distal,intron-Proximal4.0677118.30811HepG2EFTUD2
chr5175959065175959125-3'-UTR,CDS,intron-Distal3.050654.57500K562PCBP1
chr5175956603175956638-3'-UTR,CDS,intron-Distal,intron-Proximal3.341324.70526K562DDX24
chr5175955774175955855-3'-UTR,intron-Distal,intron-Proximal3.8537610.48633HepG2AKAP1
chr5175956070175956142-3'-UTR,CDS,intron-Distal,intron-Proximal3.9802219.94074HepG2SF3B4
chr5175955024175955094-3'-UTR,intron-Distal4.332286.89360HepG2EIF3H
chr5175954684175954760-3'-UTR,intron-Distal3.511096.59901K562AKAP1
chr5175954679175954776-3'-UTR,intron-Distal5.4020822.09879K562HNRNPK
chr5175957603175957700-3'-UTR,CDS,intron-Distal,intron-Proximal3.316129.48037K562PCBP1
chr5175956253175956294-3'-UTR,CDS,intron-Distal,intron-Proximal3.6760311.94131HepG2PRPF8
chr5175954906175954948-3'-UTR,intron-Distal3.483544.34008K562HNRNPK
chr5175957583175957635-3'-UTR,CDS,intron-Distal,intron-Proximal5.4289918.15930HepG2PCBP2
chr5175954124175954171-3'-UTR,intron-Distal3.854494.00430HepG2UPF1
chr5175964210175964265-5'-UTR,intron-Distal3.444305.84843HepG2DDX3X
chr5175959145175959209-CDS,intron-Distal,intron-Proximal3.125935.48535HepG2EFTUD2
chr5175956240175956283-CDS,intron-Distal,intron-Proximal3.401114.63311K562AQR
chr5175956168175956248-CDS,intron-Distal,intron-Proximal3.817818.81681HepG2EFTUD2
chr5175956205175956247-CDS,intron-Distal,intron-Proximal3.502677.75987K562PRPF8
chr5175956214175956241-CDS,intron-Distal,intron-Proximal4.472877.82456K562SF3B4
chr5175956162175956180-CDS,intron-Distal3.332236.04408K562SF3B4
chr5175956163175956246-CDS,intron-Distal,intron-Proximal4.1064418.39513K562EFTUD2
chr5175962868175962931-intron-Distal4.102384.33692K562NONO
chr5175958380175958439-intron-Distal,intron-Proximal3.9337411.26073HepG2PRPF8
chr5175958392175958458-intron-Distal,intron-Proximal5.9357829.77777K562AQR
chr5175957032175957068-intron-Distal,intron-Proximal3.521569.75493K562AQR
chr5175958397175958451-intron-Distal,intron-Proximal4.319225.45992HepG2SUPV3L1
chr5175958458175958464-intron-Distal,intron-Proximal4.6968114.61777K562AQR
chr5175956650175956708-intron-Distal,intron-Proximal4.407447.00609HepG2RBM22
chr5175958961175959005-intron-Distal,intron-Proximal5.9943617.48131K562AQR
chr5175958050175958074-intron-Distal,intron-Proximal4.955115.69951K562AQR
chr5175956647175956726-intron-Distal,intron-Proximal4.7521324.01085K562EFTUD2
chr5175958856175958928-intron-Distal,intron-Proximal5.1164311.19401K562EFTUD2
chr5175959259175959302-intron-Distal,intron-Proximal3.138903.10770K562RBFOX2
chr5175958036175958096-intron-Distal,intron-Proximal6.0913914.18173K562SF3B4
chr5175958395175958441-intron-Distal,intron-Proximal3.888706.62272HepG2EFTUD2
chr5175958396175958461-intron-Distal,intron-Proximal3.495628.04897K562PRPF8
chr5175956862175956877-intron-Distal,intron-Proximal6.8747141.89205K562SF3B4
chr5175956819175956886-intron-Distal,intron-Proximal5.0212320.78857K562EFTUD2
chr5175956980175957081-intron-Distal,intron-Proximal4.3453921.48022K562EFTUD2
chr5175957756175957816-intron-Distal,intron-Proximal3.097563.37120HepG2SF3B4
chr5175958951175959002-intron-Distal,intron-Proximal3.677815.28154K562SF3B4
chr5175957549175957573-intron-Distal,intron-Proximal5.181138.38577HepG2PRPF8
chr5175956650175956695-intron-Distal,intron-Proximal3.9840512.48238K562SF3B4
chr5175956825175956878-intron-Distal,intron-Proximal5.6230332.92039HepG2SF3B4
chr5175956833175956877-intron-Distal,intron-Proximal3.023485.05690K562BUD13
chr5175958784175958907-intron-Distal,intron-Proximal5.474079.81467K562AATF
chr5175957760175957805-intron-Distal,intron-Proximal4.675356.67793HepG2EFTUD2
chr5175958032175958050-intron-Distal,intron-Proximal6.0622311.56697K562AQR
chr5175959268175959336-intron-Distal,intron-Proximal3.535087.82763K562BUD13
chr5175958043175958105-intron-Distal,intron-Proximal4.176233.74254HepG2SF3B4
chr5175958809175958852-intron-Distal,intron-Proximal5.041088.13161K562EFTUD2
chr5175956846175956862-intron-Distal,intron-Proximal7.2532356.00432K562SF3B4
chr5175957015175957077-intron-Distal,intron-Proximal4.5064316.12850K562SF3B4
chr5175958702175958768-intron-Distal,intron-Proximal4.502058.34684K562SF3B4
chr5175959232175959345-intron-Distal,intron-Proximal3.334645.25689HepG2RBFOX2
chr5175956907175956950-intron-Distal,intron-Proximal3.692914.29246HepG2SF3B4
chr5175956983175957023-intron-Distal,intron-Proximal5.408089.44873K562PRPF8
chr5175958694175958801-intron-Distal,intron-Proximal3.306157.83059K562BUD13
chr5175956645175956729-intron-Distal,intron-Proximal5.2571818.61680HepG2EFTUD2
chr5175959269175959332-intron-Distal,intron-Proximal4.215219.68074HepG2EFTUD2
chr5175958928175958994-intron-Distal,intron-Proximal4.6005814.78240K562EFTUD2
chr5175958646175958690-intron-Distal,intron-Proximal4.013687.80703K562SF3B4
chr5175958661175958692-intron-Distal,intron-Proximal3.186003.37120HepG2SF3B4
chr5175956828175956880-intron-Distal,intron-Proximal3.334783.00343HepG2GRWD1
chr5175958824175958883-intron-Distal,intron-Proximal3.694257.05173K562ZNF622
chr5175958039175958144-intron-Distal,intron-Proximal3.236574.48038K562PRPF8
chr5175956653175956695-intron-Distal,intron-Proximal4.115388.09250HepG2SF3B4
chr5175958397175958438-intron-Distal,intron-Proximal3.865194.86518HepG2BUD13
chr5175956879175956907-intron-Distal,intron-Proximal5.081717.57220HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNF44 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNF44 is not available on ENCORE database.

  • 96 RBPs can affect the levels of RNF44.  








The Knockdown/knockout RNA-Seq assay for RNF44 is not available on ENCORE database.





96 RBPs can affect the gene expression of RNF44 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNF44ENSG00000146083.72198.523902846.88040-0.372803.049302.05870HepG2ABCF1
RNF44ENSG00000146083.71513.108601106.717300.451104.022602.84520HepG2ADAR
RNF44ENSG00000146083.71870.676402279.64210-0.285203.681402.91030HepG2AUH
RNF44ENSG00000146083.71307.055901673.25680-0.356303.517802.66290HepG2CALR
RNF44ENSG00000146083.71024.837801442.06400-0.492702.051401.37890HepG2CIRBP
RNF44ENSG00000146083.71862.507501551.485100.263502.642802.01250HepG2CELF1
RNF44ENSG00000146083.71908.106901668.435000.193502.018301.37030HepG2DAZAP1
RNF44ENSG00000146083.7545.572101092.03610-1.0012015.9321014.46420HepG2DDX21
RNF44ENSG00000146083.7845.906401069.28370-0.338102.658401.76440HepG2DDX24
RNF44ENSG00000146083.71187.332101757.06550-0.565402.487101.89130HepG2DDX3X
RNF44ENSG00000146083.73003.217102148.899900.482802.375801.46980HepG2DDX59
RNF44ENSG00000146083.71571.351502239.20140-0.511005.471604.09700HepG2DDX5
RNF44ENSG00000146083.72226.612401510.077500.560104.398403.63380HepG2DDX6
RNF44ENSG00000146083.71099.071201714.91290-0.6419013.8508012.57290HepG2DKC1
RNF44ENSG00000146083.71634.068001114.377700.552105.521104.55720HepG2DNAJC21
RNF44ENSG00000146083.71172.929501557.30280-0.408902.310201.46630HepG2EEF2
RNF44ENSG00000146083.7712.486601031.68030-0.534105.803004.32390HepG2EIF3G
RNF44ENSG00000146083.71610.527402162.58000-0.425203.519801.52900HepG2EIF3H
RNF44ENSG00000146083.7935.679101603.13220-0.776803.962503.20180HepG2EIF4A3
RNF44ENSG00000146083.72771.123601561.535700.827408.171007.01810HepG2EIF4B
RNF44ENSG00000146083.71168.749401645.83460-0.493908.750307.41930HepG2EIF4G1
RNF44ENSG00000146083.7909.736901150.95610-0.339302.575701.59750HepG2GNB2L1
RNF44ENSG00000146083.7535.355901292.13810-1.271203.940302.26310HepG2HLTF
RNF44ENSG00000146083.71791.775301341.971600.416906.810405.75320HepG2HNRNPF
RNF44ENSG00000146083.71598.510701983.07440-0.311003.041602.04640HepG2HNRNPM
RNF44ENSG00000146083.71600.955201243.164700.364805.286304.46940HepG2HNRNPU
RNF44ENSG00000146083.71575.594601321.462100.253702.086001.45110HepG2IGF2BP1
RNF44ENSG00000146083.71691.935301269.847300.413908.271607.06900HepG2ILF2
RNF44ENSG00000146083.7796.761701131.17880-0.505603.111801.30190HepG2LSM11
RNF44ENSG00000146083.71380.657802326.08230-0.7525013.9162012.25220HepG2MSI2
RNF44ENSG00000146083.7769.344501019.75820-0.406503.216601.69330HepG2NIP7
RNF44ENSG00000146083.72022.855401654.405600.290002.152201.47790HepG2NOL12
RNF44ENSG00000146083.71565.710501230.488800.347504.591603.53180HepG2PARN
RNF44ENSG00000146083.7891.004701773.74730-0.9933031.3415029.30250HepG2PRPF4
RNF44ENSG00000146083.72941.500001676.341400.8111035.7289034.08780HepG2PUM1
RNF44ENSG00000146083.72332.174201675.158900.477306.624505.60300HepG2PUM2
RNF44ENSG00000146083.71267.245801825.73150-0.5268011.5509010.44060HepG2PUS1
RNF44ENSG00000146083.73625.710302187.668900.7288020.5993019.45350HepG2RBM22
RNF44ENSG00000146083.71025.615501254.26530-0.290402.189301.47280HepG2RPS2
RNF44ENSG00000146083.71407.397401107.078300.346204.908604.09120HepG2SAFB2
RNF44ENSG00000146083.72474.822102026.283600.288402.264201.62330HepG2SF3B1
RNF44ENSG00000146083.72232.904501631.885000.452304.220003.51460HepG2SF3B4
RNF44ENSG00000146083.71777.160801514.084500.231002.651601.96250HepG2SLBP
RNF44ENSG00000146083.71919.343101255.721700.612003.765702.63610HepG2SMNDC1
RNF44ENSG00000146083.74793.329902470.855200.9559050.8210049.37950HepG2SRFBP1
RNF44ENSG00000146083.7777.079601703.46940-1.132307.124206.44860HepG2SRSF1
RNF44ENSG00000146083.74151.509802180.258100.9290010.006708.00610HepG2SRSF3
RNF44ENSG00000146083.71816.915401559.166100.220602.101201.54690HepG2SRSF5
RNF44ENSG00000146083.71808.652201318.431800.456008.117207.02960HepG2SRSF7
RNF44ENSG00000146083.71376.528302145.22390-0.6401016.7783015.73840HepG2SSB
RNF44ENSG00000146083.71313.258201995.28780-0.603407.541806.42070HepG2TARDBP
RNF44ENSG00000146083.71047.71570663.009600.660002.668301.68720HepG2TFIP11
RNF44ENSG00000146083.71520.456501218.771200.319004.155803.49270HepG2TRIM56
RNF44ENSG00000146083.71966.482601542.718100.350003.306402.34460HepG2TUFM
RNF44ENSG00000146083.75060.756501410.274201.843309.517507.57480HepG2U2AF2
RNF44ENSG00000146083.71727.391402184.35490-0.338605.689004.74420HepG2UPF1
RNF44ENSG00000146083.71263.081101750.49400-0.470809.784208.65040HepG2ZC3H8
RNF44ENSG00000146083.71596.456502402.37300-0.5896018.7793017.66750HepG2ZNF622
RNF44ENSG00000146083.7980.393901384.61960-0.498102.837201.64030K562AARS
RNF44ENSG00000146083.75354.936503484.592800.6198021.5981020.12180K562AGGF1
RNF44ENSG00000146083.72434.972201637.499200.572302.887001.80690K562CCAR1
RNF44ENSG00000146083.73458.963504164.26320-0.267702.778001.60110K562CCDC124
RNF44ENSG00000146083.71187.90900900.257900.399904.214502.87500K562CSTF2
RNF44ENSG00000146083.71668.915303038.60450-0.8645031.1806029.23430K562DDX47
RNF44ENSG00000146083.74522.696803901.676900.213002.607401.76140K562DKC1
RNF44ENSG00000146083.71968.607701438.558800.452506.716404.78910K562EIF4B
RNF44ENSG00000146083.71869.722101394.386500.423105.750903.75550K562EWSR1
RNF44ENSG00000146083.72474.509701899.801100.381202.817601.54170K562EXOSC5
RNF44ENSG00000146083.7857.241201315.83160-0.618206.098004.30600K562FKBP4
RNF44ENSG00000146083.71174.622801647.01790-0.487704.334203.16510K562FTO
RNF44ENSG00000146083.71077.404701661.26340-0.6247012.0106010.84190K562FXR1
RNF44ENSG00000146083.7462.80510714.29690-0.626104.152303.24430K562G3BP2
RNF44ENSG00000146083.71647.692602185.52240-0.407504.349503.40600K562GRSF1
RNF44ENSG00000146083.71194.501601514.32740-0.342303.106002.47810K562HNRNPC
RNF44ENSG00000146083.71090.758601385.75760-0.345302.198101.37250K562HNRNPM
RNF44ENSG00000146083.71745.369901091.767600.676802.700901.68940K562IGF2BP2
RNF44ENSG00000146083.71489.422001110.358800.423604.102802.58660K562IGF2BP3
RNF44ENSG00000146083.72100.718701536.551200.451104.016602.17650K562LIN28B
RNF44ENSG00000146083.72027.879501351.036500.585808.346805.60710K562LSM11
RNF44ENSG00000146083.71502.091801147.116200.388903.615702.64690K562MAGOH
RNF44ENSG00000146083.74468.372503683.448500.278602.452301.46050K562MAK16
RNF44ENSG00000146083.75588.395804310.677500.374404.712803.46240K562MBNL1
RNF44ENSG00000146083.73128.816702811.138900.154402.204801.53120K562NSUN2
RNF44ENSG00000146083.72214.325301491.490700.570003.400201.75740K562NUSAP1
RNF44ENSG00000146083.71340.321401853.43380-0.467602.195901.48290K562POLR2G
RNF44ENSG00000146083.72375.205301357.842000.8066014.7661012.33500K562PSIP1
RNF44ENSG00000146083.72600.367003354.73920-0.367502.776701.95910K562PUF60
RNF44ENSG00000146083.74311.523003595.844100.261802.336801.82910K562PUS1
RNF44ENSG00000146083.74375.935603503.638000.320603.508102.85350K562RBM15
RNF44ENSG00000146083.71374.165501068.530900.362802.980702.10540K562RBM22
RNF44ENSG00000146083.71830.799601239.282600.562908.102406.40600K562RCC2
RNF44ENSG00000146083.7638.718401040.09570-0.703502.274701.53730K562RPS19
RNF44ENSG00000146083.74220.746902188.476600.947504.843003.10400K562SF1
RNF44ENSG00000146083.71475.00920742.363800.9904021.8960019.28470K562SF3B4
RNF44ENSG00000146083.74113.262402513.123300.710703.260101.88370K562SNRNP200
RNF44ENSG00000146083.72049.291401174.762500.8027013.3021010.62550K562SRFBP1
RNF44ENSG00000146083.72220.933201449.998700.615009.330707.26210K562SRSF4
RNF44ENSG00000146083.71513.220501031.987300.552105.156503.64190K562SRSF5
RNF44ENSG00000146083.71315.003601859.21490-0.499602.482201.70660K562SYNCRIP
RNF44ENSG00000146083.7431.44730701.13490-0.700503.394601.71170K562TAF15
RNF44ENSG00000146083.71830.224901105.743500.726909.800808.34040K562TARDBP
RNF44ENSG00000146083.71659.407201066.632800.637506.660505.30530K562TIA1
RNF44ENSG00000146083.71668.300701046.849300.672208.935506.64640K562TRA2A
RNF44ENSG00000146083.72394.537001387.896300.7867012.031209.76250K562TRIM56
RNF44ENSG00000146083.72635.763802980.70230-0.177402.104301.47100K562UPF1
RNF44ENSG00000146083.72750.914102170.350200.341903.661001.73460K562UPF2
RNF44ENSG00000146083.71620.285502574.61980-0.668107.066005.19530K562UTP3
RNF44ENSG00000146083.72049.019402652.14080-0.372206.993305.70500K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNF44 is not available on ENCORE database.





36 RBPs can affect the splicing of RNF44 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERNF44ENSG00000146083.7chr5-175956288175956388175955958175956091175956523175956645-0.064000.000030.00056excludedK562AQR
A3SSRNF44ENSG00000146083.7chr5-1759562881759564191759562881759563881759565231759566450.142000.000000.00000longerK562AQR
A3SSRNF44ENSG00000146083.7chr5-1759578481759580221759578481759580131759584631759586310.130000.005320.03053longerK562AQR
A3SSRNF44ENSG00000146083.7chr5-1759584631759586711759584631759586311759590041759590990.182000.000200.00167longerK562AQR
A3SSRNF44ENSG00000146083.7chr5-1759578481759580221759578481759580131759584631759586310.160000.000180.07475longerHepG2FUBP3
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.261000.000020.00203includedHepG2BCCIP
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.302000.000000.00000includedK562PUS1
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.151000.003160.06167excludedK562HNRNPC
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.265000.000000.00022excludedK562EIF4G2
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.197000.000010.00252includedHepG2DDX3X
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.158000.000010.00014includedHepG2U2AF2
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.501000.000060.00302includedHepG2UCHL5
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.270000.000000.00005includedHepG2PRPF4
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.293000.000380.00671includedHepG2PRPF8
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.192000.001090.06118includedHepG2SUPV3L1
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.192000.000000.00009includedK562AGGF1
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.113000.001200.02643includedHepG2IGF2BP3
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.123000.000710.02639includedHepG2MATR3
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.182000.000910.07636includedHepG2DDX55
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.240000.000110.00406includedHepG2SRSF1
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.322000.000000.00000includedHepG2QKI
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.171000.000080.01301excludedK562AARS
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.173000.000060.00096includedK562AKAP8L
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.248000.000050.00101includedHepG2TAF15
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.132000.001110.01263includedHepG2U2AF1
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.214000.001410.07631excludedK562KHSRP
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.152000.008840.07595includedK562RBM15
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.394000.000000.00000includedHepG2G3BP1
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.202000.000000.00013includedHepG2KHSRP
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.452000.000000.00000includedHepG2NCBP2
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.198000.000280.03529excludedK562ZC3H8
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.273000.000000.00000includedHepG2SF3B4
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.518000.000000.00000includedHepG2HNRNPK
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.214000.000040.00202includedHepG2PTBP1
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.137000.007530.07130includedK562UTP18
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.209000.009210.07535includedK562EFTUD2
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.237000.000020.00697excludedK562PUM1
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.171000.000300.02999excludedK562FMR1
RIRNF44ENSG00000146083.7chr5-1759567311759572071759567311759568191759570821759572070.450000.000000.00000includedHepG2XRN2
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.225000.000380.01005excludedK562PTBP1
RIRNF44ENSG00000146083.7chr5-175956731175957207175956731175956819175957082175957207-0.249000.000090.00268excludedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RNF44 is not avaliable on ENCORE database.