RECQL4

General Information

Gene Name : RECQL4
Gene ID : ENSG00000160957.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RECQL4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RECQL4	ENSG00000160957.12	0.67	3.94	2.31	ENCSR000AEF
HepG2	RECQL4	ENSG00000160957.12	72.04	9.04	40.54	ENCSR985KAT
K562	RECQL4	ENSG00000160957.12	38.92	15.20	27.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RECQL4 is not avaliable on ENCORE database.

Proteins bound to RNA

RECQL4 RNA is bound by 24 proteins.

CanvasJS.com

eCLIP assay for RECQL4 is not avaliable on ENCORE database.

24 proteins are bound to RECQL4 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	145742553	145742651	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.89309	24.96541	HepG2	SF3A3
chr8	145742952	145743031	-	CDS,intron-Distal,intron-Proximal	4.67716	24.42769	HepG2	PRPF8
chr8	145742539	145742657	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.24742	22.66702	HepG2	EFTUD2
chr8	145741149	145741196	-	CDS,intron-Distal,intron-Proximal	4.93054	22.37656	HepG2	PPIG
chr8	145742967	145743072	-	CDS,intron-Distal,intron-Proximal	4.40541	19.05271	HepG2	EFTUD2
chr8	145741987	145742042	-	3'-UTR,CDS,intron-Distal	3.98535	18.68037	HepG2	BUD13
chr8	145737937	145737995	-	CDS,intron-Distal,intron-Proximal	4.27162	18.52424	K562	EFTUD2
chr8	145738141	145738217	-	CDS,intron-Distal,intron-Proximal	4.22296	18.24425	K562	EFTUD2
chr8	145741608	145741649	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.46064	16.25971	HepG2	PPIG
chr8	145742104	145742200	-	CDS,intron-Distal,intron-Proximal	5.69316	16.24956	K562	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 102 entries

eCLIP assay for RECQL4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RECQL4 is not available on ENCORE database.
117 RBPs can affect the levels of RECQL4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RECQL4 is not available on ENCORE database.

117 RBPs can affect the gene expression of RECQL4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RECQL4	ENSG00000160957.8	456.91770	1132.55350	-1.30960	44.15150	42.26350	HepG2	CKAP4
RECQL4	ENSG00000160957.8	141.23180	525.57350	-1.89580	31.02160	29.01410	HepG2	CALR
RECQL4	ENSG00000160957.8	248.23740	1064.46590	-2.10030	29.75180	28.45110	HepG2	ZNF622
RECQL4	ENSG00000160957.8	237.01350	1298.39020	-2.45370	29.32220	28.14000	HepG2	SRFBP1
RECQL4	ENSG00000160957.8	274.02400	1149.61490	-2.06880	23.73170	22.51360	HepG2	RBM22
RECQL4	ENSG00000160957.8	121.31910	488.40850	-2.00930	21.30800	19.77530	HepG2	RPLP0
RECQL4	ENSG00000160957.8	1035.06560	569.42910	0.86200	20.68160	19.10730	HepG2	SLBP
RECQL4	ENSG00000160957.8	29.45460	196.86340	-2.74060	20.21260	17.80840	K562	G3BP2
RECQL4	ENSG00000160957.8	353.82930	868.04930	-1.29470	19.48560	17.76730	HepG2	U2AF1
RECQL4	ENSG00000160957.8	658.45460	312.74850	1.07400	18.08020	16.31030	HepG2	PPIL4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 134 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RECQL4 is not available on ENCORE database.

13 RBPs can affect the splicing of RECQL4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RECQL4	ENSG00000160957.8	chr8	-	145737774	145737944	145737526	145737707	145738024	145738154	-0.24500	0.00000	excluded	K562	AQR
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145740709	145740956	145740709	145740841	145741147	145741274	0.15700	0.00000	longer	K562	AGGF1
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145740709	145740956	145740709	145740841	145741147	145741274	0.14800	0.00000	longer	K562	AKAP8L
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145739825	145739995	145739825	145739909	145740319	145740456	0.12300	0.00000	longer	K562	AQR
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145740709	145740956	145740709	145740841	145741147	145741274	0.17500	0.00000	longer	K562	AQR
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145742072	145742213	145742072	145742148	145742433	145742574	0.24800	0.00000	longer	K562	AQR
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145740709	145740956	145740709	145740841	145741147	145741274	0.19000	0.00000	longer	K562	PUS1
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145740709	145740956	145740709	145740841	145741147	145741274	0.17200	0.00010	longer	K562	UTP18
A3SS	RECQL4	ENSG00000160957.8	chr8	-	145740709	145740956	145740709	145740841	145741147	145741274	0.13000	0.00000	longer	K562	RBM15
RI	RECQL4	ENSG00000160957.8	chr8	-	145741241	145741453	145741241	145741274	145741371	145741453	0.22200	0.00000	included	K562	PUS1

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RECQL4

General Information

Functions

Localization

Domains (AlphaFold: RECQL4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RECQL4 is not avaliable on ENCORE database.

24 proteins are bound to RECQL4 RNA:

eCLIP assay for RECQL4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RECQL4 is not available on ENCORE database.

117 RBPs can affect the gene expression of RECQL4 :

The Knockdown/knockout RNA-Seq assay for RECQL4 is not available on ENCORE database.

13 RBPs can affect the splicing of RECQL4 :

The Knockdown/knockout RNA-Seq assay for RECQL4 is not avaliable on ENCORE database.