PPARG

General Information

Gene Name       : PPARG
Gene ID             : ENSG00000132170.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPARG)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPARGENSG00000132170.200.000.040.02ENCSR000AEF
HepG2PPARGENSG00000132170.209.7011.4410.57ENCSR985KAT
K562PPARGENSG00000132170.200.000.010.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPARG is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPARG RNA is bound by 17 proteins.  







eCLIP assay for PPARG is not avaliable on ENCORE database.





17 proteins are bound to PPARG RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31232936612329430+5'-UTR,intron-Distal4.946184.57565HepG2DDX3X
chr31234721112347351+5'-UTR,intron-Distal6.2320420.44285HepG2QKI
chr31235376212353937+5'-UTR,intron-Distal,intron-Proximal3.659954.90219HepG2AQR
chr31232999412330110+intron-Distal3.044123.85378HepG2CSTF2T
chr31232966712329746+intron-Distal4.153617.70912HepG2PRPF4
chr31239272312392866+intron-Distal4.309993.11181HepG2CSTF2
chr31238131912381377+intron-Distal4.721025.04993HepG2QKI
chr31235608012356164+intron-Distal3.966723.04956HepG2HNRNPL
chr31232999812330063+intron-Distal3.665373.13741HepG2FUS
chr31232978912329909+intron-Distal3.827184.51950HepG2FASTKD2
chr31238472912384905+intron-Distal4.831748.21761HepG2PTBP1
chr31232966412329730+intron-Distal3.680363.69530HepG2CSTF2T
chr31233072412330788+intron-Distal,intron-Proximal3.025383.76090HepG2U2AF2
chr31240560512405739+intron-Distal3.374823.12105HepG2HNRNPL
chr31240522512405312+intron-Distal4.177363.09122HepG2PTBP1
chr31232974612329846+intron-Distal4.1889011.23724HepG2PRPF4
chr31232990612329979+intron-Distal3.534926.79749HepG2CSTF2T
chr31234661912346725+intron-Distal5.6092446.63255HepG2PTBP1
chr31233011012330211+intron-Distal4.649669.42344HepG2CSTF2T
chr31236544912365548+intron-Distal3.261523.64832HepG2ZC3H11A
chr31234657012346619+intron-Distal4.260129.12099HepG2PTBP1
chr31241151312411610+intron-Distal3.217653.04190HepG2MATR3
chr31237124012371334+intron-Distal3.296204.26114HepG2HNRNPL
chr31232956212329639+intron-Distal,intron-Proximal4.917244.62947HepG2AQR
chr31236021612360317+intron-Distal4.688784.84037HepG2CSTF2
chr31232958312329648+intron-Distal,intron-Proximal3.712145.25366HepG2FAM120A
chr31234700912347069+intron-Distal3.706664.21358HepG2U2AF2
chr31232960412329716+intron-Distal,intron-Proximal4.876955.66556HepG2FASTKD2
chr31240642112406488+intron-Distal3.261064.61989HepG2SUGP2
chr31232967212329725+intron-Distal3.546154.33898HepG2FAM120A
chr31238612112386239+intron-Distal4.188244.00239HepG2KHSRP
chr31240220112402279+intron-Distal4.782844.86595HepG2CSTF2
chr31241130012411390+intron-Distal3.764996.26907HepG2SUGP2
chr31234650512346569+intron-Distal3.8365216.24985HepG2PTBP1
chr31235404812354172+intron-Distal,intron-Proximal3.629665.64899HepG2KHSRP
chr31232975912329890+intron-Distal4.4313411.49466HepG2CSTF2T
chr31232957412329664+intron-Distal,intron-Proximal4.547894.97583HepG2GTF2F1
chr31239882912398979+intron-Distal4.881963.62238HepG2MATR3
chr31232975112329886+intron-Distal5.7588113.21421HepG2FAM120A
chr31233002212330086+intron-Distal4.133203.84437HepG2PRPF4
chr31232959012329664+intron-Distal,intron-Proximal4.022843.80014HepG2FUS
chr31238150312381619+intron-Distal4.366738.59328HepG2QKI
chr31232956512329653+intron-Distal,intron-Proximal3.8175911.16613HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPARG is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPARG is not available on ENCORE database.

  • 122 RBPs can affect the levels of PPARG.  








The Knockdown/knockout RNA-Seq assay for PPARG is not available on ENCORE database.





122 RBPs can affect the gene expression of PPARG :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPARGENSG00000132170.15452.26740860.17850-0.9275019.3923018.10050HepG2ACO1
PPARGENSG00000132170.15288.93600480.68690-0.734305.795404.42160HepG2ADAR
PPARGENSG00000132170.15838.078601733.89810-1.0489013.9004012.80360HepG2AKAP1
PPARGENSG00000132170.15652.64800864.13450-0.405004.379403.42920HepG2AKAP8L
PPARGENSG00000132170.151029.825201434.62550-0.478303.989003.05340HepG2ASCC1
PPARGENSG00000132170.151195.799401001.226100.256102.350501.70840HepG2AUH
PPARGENSG00000132170.15262.08180371.50700-0.503402.274301.42880HepG2BCCIP
PPARGENSG00000132170.15546.96960322.797600.760705.325504.11620HepG2BCLAF1
PPARGENSG00000132170.15612.61770308.279800.9906011.047709.95600HepG2BOP1
PPARGENSG00000132170.151127.39640532.068401.0832021.7205019.94280HepG2CALR
PPARGENSG00000132170.15367.09070785.17030-1.0969010.791708.90680HepG2CCAR1
PPARGENSG00000132170.15839.828801363.00250-0.698607.822506.57280HepG2CIRBP
PPARGENSG00000132170.15652.60420859.88890-0.397904.757003.92980HepG2CKAP4
PPARGENSG00000132170.15307.322301172.80960-1.9321026.4271024.16230HepG2CNOT7
PPARGENSG00000132170.15991.08510283.002801.8081037.5438035.41550HepG2CPSF6
PPARGENSG00000132170.151052.43760721.074900.545402.584701.51620HepG2CPSF7
PPARGENSG00000132170.15735.46150492.950900.577106.503204.94930HepG2YBX3
PPARGENSG00000132170.15116.36940229.45870-0.979505.803704.33590HepG2CSTF2
PPARGENSG00000132170.15580.09020801.22670-0.465904.685503.88820HepG2CELF1
PPARGENSG00000132170.151669.99410861.413600.9550034.8910032.84200HepG2DAZAP1
PPARGENSG00000132170.15393.36820795.49470-1.0160022.8808021.04530HepG2DDX19B
PPARGENSG00000132170.15254.24300603.90530-1.2481017.1386015.62890HepG2DDX21
PPARGENSG00000132170.151634.384201274.542900.358703.031401.67740HepG2DDX47
PPARGENSG00000132170.151075.89640321.375401.7431018.4532016.17780HepG2DDX59
PPARGENSG00000132170.15829.61190466.835800.8294010.422408.66440HepG2DHX30
PPARGENSG00000132170.15520.90320822.93120-0.659809.216208.12480HepG2DKC1
PPARGENSG00000132170.15382.80050484.00680-0.338402.146401.51930HepG2DNAJC21
PPARGENSG00000132170.15578.95230479.782400.271002.052001.47430HepG2DNAJC2
PPARGENSG00000132170.15223.75710627.71480-1.4882019.8620017.76210HepG2EEF2
PPARGENSG00000132170.15879.32850556.031600.661104.065902.70960HepG2AGO1
PPARGENSG00000132170.15378.90790570.23040-0.589705.139603.72330HepG2EIF3G
PPARGENSG00000132170.15600.952601515.64700-1.3346021.3878019.65060HepG2EIF4A3
PPARGENSG00000132170.15670.105701475.83230-1.1391012.8991011.47190HepG2EIF4B
PPARGENSG00000132170.151191.65010849.925100.487507.242806.00260HepG2EIF4G1
PPARGENSG00000132170.151315.77730814.158100.692408.484107.08880HepG2EIF4G2
PPARGENSG00000132170.151052.15030575.452600.8705012.6751010.53780HepG2FASTKD2
PPARGENSG00000132170.15412.26300884.73110-1.101703.950903.04430HepG2FIP1L1
PPARGENSG00000132170.15354.02030679.52600-0.940707.549105.78060HepG2FUS
PPARGENSG00000132170.15473.187901529.44190-1.6925037.2201035.05930HepG2FXR1
PPARGENSG00000132170.15580.399701418.66720-1.2894021.1654019.40040HepG2G3BP1
PPARGENSG00000132170.15849.391201506.24670-0.8265010.875009.10520HepG2G3BP2
PPARGENSG00000132170.15172.31960453.72880-1.3967016.4849014.49650HepG2GEMIN5
PPARGENSG00000132170.15242.40860562.88800-1.2154013.1887010.98660HepG2GNB2L1
PPARGENSG00000132170.15126.60310320.76490-1.341206.822905.84510HepG2GPKOW
PPARGENSG00000132170.15546.748801085.79190-0.989809.077607.08020HepG2GRSF1
PPARGENSG00000132170.151035.27290821.162000.334203.690002.57400HepG2HDGF
PPARGENSG00000132170.15109.26940488.64430-2.1609032.8333031.07540HepG2HNRNPA1
PPARGENSG00000132170.15940.58260791.712900.248502.213401.36800HepG2HNRNPA2B1
PPARGENSG00000132170.15286.89490543.54280-0.921908.846607.65870HepG2HNRNPC
PPARGENSG00000132170.15798.28370425.920400.906204.180703.31830HepG2HNRNPF
PPARGENSG00000132170.15984.232801436.79640-0.545805.548204.58560HepG2HNRNPK
PPARGENSG00000132170.15609.24880306.115600.992909.952608.84230HepG2HNRNPLL
PPARGENSG00000132170.15265.07660539.94800-1.0264015.7490014.39900HepG2HNRNPU
PPARGENSG00000132170.15969.250101491.33700-0.621705.023303.38290HepG2HSPD1
PPARGENSG00000132170.15758.47220419.398100.854702.423901.74440HepG2IGF2BP1
PPARGENSG00000132170.15883.520601442.00340-0.706707.966806.88250HepG2IGF2BP2
PPARGENSG00000132170.15616.166701353.42200-1.135205.918304.50440HepG2IGF2BP3
PPARGENSG00000132170.15784.526701118.11960-0.511203.465102.10200HepG2KHDRBS1
PPARGENSG00000132170.15843.450501490.14130-0.821107.393005.38550HepG2KRR1
PPARGENSG00000132170.15567.92950829.06660-0.545803.298402.38940HepG2LARP4
PPARGENSG00000132170.15352.60950579.04220-0.715606.085304.31700HepG2LIN28B
PPARGENSG00000132170.15495.056301529.97690-1.6278033.5799031.51310HepG2MAGOH
PPARGENSG00000132170.15442.011201538.50460-1.7994036.1917034.11960HepG2MATR3
PPARGENSG00000132170.15343.36920533.34580-0.635303.165802.04000HepG2METAP2
PPARGENSG00000132170.15944.37520600.949100.652003.251701.93270HepG2NAA15
PPARGENSG00000132170.15557.449901574.71620-1.4982028.6160026.74330HepG2NCBP2
PPARGENSG00000132170.15895.143801413.20490-0.658804.878102.97880HepG2NKRF
PPARGENSG00000132170.15219.87830335.45170-0.609402.287701.30500HepG2NONO
PPARGENSG00000132170.151508.987001072.135200.493002.385401.57320HepG2PABPC1
PPARGENSG00000132170.15920.921801402.25520-0.606605.805204.77240HepG2PABPC4
PPARGENSG00000132170.15329.33930534.43560-0.698407.755406.45170HepG2PARN
PPARGENSG00000132170.15685.456501476.92340-1.1075033.7385032.02390HepG2PCBP1
PPARGENSG00000132170.15632.35380481.587600.392803.242902.45080HepG2PPIL4
PPARGENSG00000132170.15763.46290614.275000.313602.250001.54530HepG2PRPF4
PPARGENSG00000132170.15360.17310676.30300-0.909005.947104.22470HepG2PRPF6
PPARGENSG00000132170.15184.06180281.74460-0.614202.876502.05230HepG2PRPF8
PPARGENSG00000132170.15308.93910629.30080-1.026405.823703.27290HepG2PSIP1
PPARGENSG00000132170.15608.836301502.89280-1.3036043.7693042.14590HepG2PTBP1
PPARGENSG00000132170.15635.43070815.41910-0.359802.381301.82190HepG2PUF60
PPARGENSG00000132170.15488.16340865.63640-0.8264016.3040015.10980HepG2PUM1
PPARGENSG00000132170.15523.14240864.98360-0.725509.049707.87210HepG2PUM2
PPARGENSG00000132170.15566.35370876.13260-0.6294010.031408.98210HepG2PUS1
PPARGENSG00000132170.15933.11450620.901200.587602.853002.13860HepG2RAVER1
PPARGENSG00000132170.152041.911001105.122400.8856011.370309.81270HepG2RBM15
PPARGENSG00000132170.15123.94670960.74260-2.9544046.1360044.51650HepG2RBM22
PPARGENSG00000132170.15394.09640664.93760-0.754706.416204.89710HepG2RBM27
PPARGENSG00000132170.15227.89760539.95820-1.2445010.951508.90780HepG2RCC2
PPARGENSG00000132170.15496.320701672.51880-1.7527073.5483071.70710HepG2NELFE
PPARGENSG00000132170.15602.944401557.82660-1.3694041.9468040.12120HepG2RECQL
PPARGENSG00000132170.15863.15020609.735300.501302.598501.68100HepG2RPS10
PPARGENSG00000132170.15124.85700495.83060-1.9896033.1266031.40280HepG2RPS19
PPARGENSG00000132170.15247.84560613.25730-1.3071016.5792014.74190HepG2RPS2
PPARGENSG00000132170.15714.300601178.25220-0.722005.802504.64570HepG2RPS3A
PPARGENSG00000132170.15352.35520625.99330-0.829107.846106.04820HepG2RPS5
PPARGENSG00000132170.15424.75780278.700300.607802.024101.34180HepG2RRP9
PPARGENSG00000132170.151026.14990480.837901.0935029.0891027.31260HepG2SAFB2
PPARGENSG00000132170.15210.81360499.80700-1.245404.013702.31070HepG2SF1
PPARGENSG00000132170.15493.670801006.80110-1.028204.667903.77820HepG2SF3A3
PPARGENSG00000132170.15444.81160302.970400.553903.305402.54050HepG2SF3B1
PPARGENSG00000132170.151158.623501564.58330-0.433406.319205.48630HepG2SF3B4
PPARGENSG00000132170.151185.97180781.927600.6009012.2616010.96270HepG2SLBP
PPARGENSG00000132170.15168.86960560.72200-1.7314038.6748036.77080HepG2SMN1
PPARGENSG00000132170.152047.110301085.159500.9156032.4807031.25850HepG2SRFBP1
PPARGENSG00000132170.15249.307201633.13610-2.71160147.66800145.58030HepG2SRSF1
PPARGENSG00000132170.15543.02410805.14720-0.568204.395803.64020HepG2SRSF5
PPARGENSG00000132170.15811.87630418.493600.956008.162607.07300HepG2SRSF7
PPARGENSG00000132170.15529.62800942.23840-0.831108.790107.97620HepG2SSB
PPARGENSG00000132170.15843.310101485.81800-0.817109.121306.98700HepG2SSRP1
PPARGENSG00000132170.15638.251401025.14630-0.683605.448603.85770HepG2STIP1
PPARGENSG00000132170.151064.69700580.220400.875706.881105.02980HepG2SUB1
PPARGENSG00000132170.15561.21180915.64030-0.7062012.0195010.87820HepG2SUCLG1
PPARGENSG00000132170.15873.648801504.31320-0.784007.264805.15350HepG2SUGP2
PPARGENSG00000132170.151067.99000596.962600.839108.099406.55120HepG2SUPT6H
PPARGENSG00000132170.15454.161901468.06470-1.6926060.3191058.12740HepG2TAF15
PPARGENSG00000132170.15404.08330298.476000.436902.152901.50120HepG2TARDBP
PPARGENSG00000132170.15530.829401459.41250-1.4591011.468809.48320HepG2TBRG4
PPARGENSG00000132170.15175.30210524.59880-1.5814025.9607024.72030HepG2TIAL1
PPARGENSG00000132170.15775.30600529.354500.550403.469602.85360HepG2TRIM56
PPARGENSG00000132170.15245.25870404.94180-0.723404.452002.47180HepG2TROVE2
PPARGENSG00000132170.15418.24560796.68390-0.9297012.4029010.35820HepG2TUFM
PPARGENSG00000132170.15405.78050862.03510-1.087005.643304.83720HepG2UTP3
PPARGENSG00000132170.15418.82940682.73180-0.705004.679703.31840HepG2XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPARG is not available on ENCORE database.





6 RBPs can affect the splicing of PPARG :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPARGENSG00000132170.15chr3+123538781235395212330336123306331242120212421430-0.117000.005700.08378excludedHepG2U2AF1
SEPPARGENSG00000132170.15chr3+123538781235395212330336123306331242120212421430-0.168000.000260.00888excludedHepG2HNRNPK
SEPPARGENSG00000132170.15chr3+123538781235395212329358123295191242120212421430-0.178000.002070.07136excludedHepG2MATR3
SEPPARGENSG00000132170.15chr3+124582021245865312447380124475801247539612475843-0.140000.000100.00588excludedHepG2HNRNPC
SEPPARGENSG00000132170.15chr3+1235387812353952123293581232951912421202124214300.173000.000000.00240includedHepG2DROSHA
MXEPPARGENSG00000132170.15chr3+1235387812353952124228201242299012329358123295191243411212434251-0.162000.000000.000642includedHepG2FUBP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPARG is not avaliable on ENCORE database.