PDPK1

General Information

Gene Name       : PDPK1
Gene ID             : ENSG00000140992.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDPK1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDPK1ENSG00000140992.1824.2921.5022.89ENCSR000AEF
HepG2PDPK1ENSG00000140992.1835.2140.5237.87ENCSR985KAT
K562PDPK1ENSG00000140992.1821.8821.8121.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDPK1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDPK1 RNA is bound by 32 proteins.  







eCLIP assay for PDPK1 is not avaliable on ENCORE database.





32 proteins are bound to PDPK1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1626484252648496+3'-UTR,intron-Proximal5.1807013.35513K562UPF1
chr1626491892649227+3'-UTR3.171145.45410K562UPF1
chr1626529292652998+3'-UTR3.555094.86553HepG2FUBP3
chr1626485102648588+3'-UTR,intron-Proximal3.140363.41531HepG2RBFOX2
chr1626481802648252+3'-UTR5.7951726.00811HepG2UPF1
chr1626476582647710+3'-UTR,CDS3.607207.02567HepG2BCLAF1
chr1626482922648356+3'-UTR3.5992912.14912HepG2AKAP1
chr1626484972648548+3'-UTR,intron-Proximal3.735269.20914HepG2UPF1
chr1626530962653150+3'-UTR3.411578.61089HepG2TIAL1
chr1626483562648410+3'-UTR3.435659.14822HepG2AKAP1
chr1626484952648545+3'-UTR,intron-Proximal4.692384.33390K562AKAP1
chr1626479882648069+3'-UTR4.0817716.00762HepG2AKAP1
chr1626484102648495+3'-UTR,intron-Proximal3.475904.40370K562AKAP1
chr1626484102648494+3'-UTR,intron-Proximal4.8694622.07205HepG2AKAP1
chr1626481012648180+3'-UTR5.2938720.22959HepG2AKAP1
chr1626531012653166+3'-UTR4.001343.54514K562TIA1
chr1626488562648909+3'-UTR4.7063410.92855K562UPF1
chr1626482702648412+3'-UTR6.3911716.89355K562UPF1
chr1626483802648497+3'-UTR,intron-Proximal4.2803629.74882HepG2UPF1
chr1626491212649181+3'-UTR3.309759.24837HepG2EIF3H
chr1626528502652915+3'-UTR3.562199.64749HepG2FUBP3
chr1626494022649438+3'-UTR4.644974.49605HepG2UPF1
chr1626490602649110+3'-UTR4.086248.97895HepG2UPF1
chr1626517792651839+3'-UTR3.776493.73678HepG2UPF1
chr1626482212648287+3'-UTR6.7477629.53339HepG2LIN28B
chr1626491822649217+3'-UTR4.091807.98114HepG2AKAP1
chr1626484152648490+3'-UTR,intron-Proximal4.9850513.26617HepG2EIF3H
chr1626490562649110+3'-UTR3.8593511.53615HepG2AKAP1
chr1626529542652997+3'-UTR3.545206.09716HepG2ZC3H11A
chr1626491182649176+3'-UTR3.396014.25529HepG2STAU2
chr1626491102649182+3'-UTR3.5817711.95452HepG2AKAP1
chr1626529152652954+3'-UTR3.364415.06049HepG2ZC3H11A
chr1626482032648289+3'-UTR5.4220911.88998K562LIN28B
chr1626482462648319+3'-UTR4.250125.99316K562AKAP1
chr1626481802648264+3'-UTR4.2452716.98565HepG2AKAP1
chr1626482752648319+3'-UTR4.541728.32506HepG2EIF3H
chr1626530972653170+3'-UTR4.984127.33810HepG2TIA1
chr1626481072648180+3'-UTR4.8253526.74812HepG2UPF1
chr1626485832648672+3'-UTR6.3321721.43149HepG2UPF1
chr1626484942648561+3'-UTR,intron-Proximal6.0871616.66524HepG2AKAP1
chr1626490642649106+3'-UTR4.254995.50789HepG2EIF3H
chr1626530952653171+3'-UTR3.156136.23479HepG2ZC3H11A
chr1626528582652915+3'-UTR3.545709.83843HepG2ZC3H11A
chr1626530962653144+3'-UTR3.160635.34980HepG2FUBP3
chr1626491202649189+3'-UTR3.2844410.79975K562UPF1
chr1626481792648254+3'-UTR5.0323712.56575K562UPF1
chr1626493982649444+3'-UTR3.618473.12870HepG2YBX3
chr1626530202653063+3'-UTR3.310953.38928HepG2ZC3H11A
chr1626497232649811+3'-UTR,intron-Distal3.369896.39870HepG2AKAP1
chr1626491102649234+3'-UTR5.0584427.89925HepG2UPF1
chr1626490592649118+3'-UTR3.590649.87397K562UPF1
chr1626528512652915+3'-UTR4.546715.29129HepG2DDX55
chr1626497222649771+3'-UTR,intron-Distal3.357514.44982K562UPF1
chr1626524182652474+3'-UTR4.252893.54010K562UPF1
chr1626482802648380+3'-UTR4.3666023.42702HepG2UPF1
chr1626476672647826+3'-UTR,CDS3.879783.25843K562SRSF1
chr1626479912648067+3'-UTR4.7209722.15856HepG2UPF1
chr1626488612648908+3'-UTR5.247338.89045HepG2AKAP1
chr1626521802652228+3'-UTR3.510183.95400K562UPF1
chr1626484962648564+3'-UTR,intron-Proximal4.2561014.24877K562UPF1
chr1625880362588154+5'-UTR,CDS,intron-Proximal4.430664.99251K562SRSF1
chr1625880002588117+5'-UTR,CDS3.729984.31803K562NCBP2
chr1625880192588135+5'-UTR,CDS4.1935813.17247HepG2NCBP2
chr1625880242588133+5'-UTR,CDS3.522073.63043HepG2GRWD1
chr1625880212588121+5'-UTR,CDS3.483403.90826K562ZNF622
chr1625880262588153+5'-UTR,CDS,intron-Proximal3.268044.96230HepG2SRSF1
chr1625880252588113+5'-UTR5.028934.11950K562DDX3X
chr1625882042588357+5'-UTR,intron-Distal,intron-Proximal4.135384.10339HepG2CSTF2T
chr1626368062636897+CDS,intron-Proximal3.683364.79276K562ZNF622
chr1626471782647221+CDS,intron-Distal3.741304.93978HepG2BCLAF1
chr1626470752647153+CDS,intron-Distal,intron-Proximal3.838265.59977HepG2AQR
chr1626457902645810+CDS,intron-Distal,intron-Proximal4.885595.70640HepG2BCLAF1
chr1626368122636901+CDS,intron-Proximal3.4352310.40328HepG2BCLAF1
chr1626458432645905+CDS,intron-Distal,intron-Proximal3.463719.23918HepG2PRPF8
chr1626472712647332+CDS,intron-Distal,intron-Proximal4.332274.59919HepG2AQR
chr1626079852608048+intron-Distal,intron-Proximal3.899088.19973HepG2EFTUD2
chr1626356152635771+intron-Distal4.924626.14550HepG2NKRF
chr1626303062630409+intron-Distal3.675076.79864K562HNRNPM
chr1626129462613023+intron-Distal3.715995.04561HepG2FASTKD2
chr1626470022647104+intron-Distal,intron-Proximal5.0736517.71005HepG2SF3B4
chr1626303252630411+intron-Distal4.594413.98553K562NONO
chr1626350032635035+intron-Distal4.058413.62366HepG2HNRNPM
chr1626268112626873+intron-Distal3.899326.29995HepG2HNRNPM
chr1626472832647399+intron-Distal,intron-Proximal3.982526.25527HepG2PRPF8
chr1626420752642137+intron-Distal5.0964411.35510HepG2XPO5
chr1626349252634965+intron-Distal3.426893.42785HepG2HNRNPM
chr1626432782643351+intron-Distal3.322485.10681HepG2SUGP2
chr1626277542627790+intron-Distal3.822893.24242HepG2HNRNPC
chr1626270782627123+intron-Distal4.035515.89423HepG2HNRNPM
chr1626428642642944+intron-Distal3.527717.94840HepG2HNRNPM
chr1626303022630415+intron-Distal4.7619723.38690HepG2HNRNPM
chr1626470212647104+intron-Distal,intron-Proximal5.0463011.77635K562SF3B4
chr1626364142636465+intron-Distal3.985577.93425HepG2XPO5
chr1626432842643393+intron-Distal4.3227410.98541HepG2HNRNPM
chr1626355042635567+intron-Distal4.056584.14792HepG2XPO5
chr1626432862643345+intron-Distal4.196273.30687K562EXOSC5
chr1626419502642022+intron-Distal3.178005.75654HepG2CSTF2T
chr1626433042643374+intron-Distal3.677414.81774K562HNRNPM
chr1626382672638419+intron-Distal4.290857.32988HepG2HNRNPM
chr1626376952637748+intron-Distal3.138273.63132HepG2HNRNPC
chr1625914422591503+intron-Distal3.345934.08493K562HNRNPM
chr1626355762635683+intron-Distal3.919646.40934HepG2HNRNPM
chr1626384762638600+intron-Distal3.761417.24726HepG2HNRNPM
chr1625915032591578+intron-Distal4.520135.04868K562HNRNPM
chr1626286002628647+intron-Distal3.999813.00241HepG2SFPQ
chr1626421632642215+intron-Distal4.014083.19526HepG2CSTF2T
chr1626079642608042+intron-Distal,intron-Proximal4.823594.65563K562AQR
chr1626366242636674+intron-Proximal3.948273.31322HepG2SF3B4
chr1626475812647645+intron-Proximal5.5566313.25000HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDPK1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDPK1 is not available on ENCORE database.

  • 119 RBPs can affect the levels of PDPK1.  








The Knockdown/knockout RNA-Seq assay for PDPK1 is not available on ENCORE database.





119 RBPs can affect the gene expression of PDPK1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDPK1ENSG00000140992.141773.949602684.82870-0.597908.463206.70800HepG2AATF
PDPK1ENSG00000140992.142235.288503878.14820-0.7949034.4146032.85560HepG2ACO1
PDPK1ENSG00000140992.142033.230406357.45430-1.6447039.7462038.06050HepG2AKAP1
PDPK1ENSG00000140992.143182.543204679.80410-0.556305.784904.30650HepG2AKAP8
PDPK1ENSG00000140992.143070.204603896.24270-0.343706.358305.24030HepG2AKAP8L
PDPK1ENSG00000140992.143881.195105260.21820-0.438604.278803.31130HepG2ASCC1
PDPK1ENSG00000140992.141690.687502433.60790-0.525504.912703.65990HepG2BCCIP
PDPK1ENSG00000140992.143698.477202114.458600.8065010.602508.98610HepG2BCLAF1
PDPK1ENSG00000140992.142500.264501808.184900.467405.251404.45900HepG2BOP1
PDPK1ENSG00000140992.142072.336703564.40940-0.782408.393606.69090HepG2CCAR1
PDPK1ENSG00000140992.146240.204804997.582800.320302.672801.91260HepG2CIRBP
PDPK1ENSG00000140992.143441.982703877.15370-0.171802.517701.87740HepG2CKAP4
PDPK1ENSG00000140992.141795.706103331.27770-0.891507.934606.65010HepG2CNOT7
PDPK1ENSG00000140992.141366.642501659.98470-0.280501.936101.34990HepG2CPSF6
PDPK1ENSG00000140992.144463.306803296.766300.437005.437503.92520HepG2CPSF7
PDPK1ENSG00000140992.143848.144806089.87120-0.662208.682207.62730HepG2DDX3X
PDPK1ENSG00000140992.145024.612103956.092000.344803.439701.99430HepG2DDX47
PDPK1ENSG00000140992.141915.714002477.52330-0.371004.090502.47130HepG2DDX52
PDPK1ENSG00000140992.141953.924102392.82350-0.292301.991201.32400HepG2DDX55
PDPK1ENSG00000140992.143912.027105231.53520-0.419303.363502.68980HepG2DDX6
PDPK1ENSG00000140992.143990.492902353.809700.7615014.5390012.56130HepG2DHX30
PDPK1ENSG00000140992.143207.914403710.29770-0.209901.916601.33710HepG2DKC1
PDPK1ENSG00000140992.143120.112702440.424100.354405.484204.52460HepG2DNAJC21
PDPK1ENSG00000140992.143131.805202418.970400.372508.987807.89240HepG2DNAJC2
PDPK1ENSG00000140992.142396.126902955.98860-0.302902.268301.43170HepG2EEF2
PDPK1ENSG00000140992.144186.648505557.52810-0.408603.198902.51220HepG2EIF4A3
PDPK1ENSG00000140992.142813.319505411.22590-0.9437011.281209.93710HepG2EIF4B
PDPK1ENSG00000140992.144377.554603611.646000.277402.249001.50970HepG2EIF4G2
PDPK1ENSG00000140992.142412.838203789.50910-0.6513012.0237010.32320HepG2EWSR1
PDPK1ENSG00000140992.141696.735002144.65120-0.338003.693202.32190HepG2FAM120A
PDPK1ENSG00000140992.142232.934804042.81090-0.8564012.3816010.92460HepG2FIP1L1
PDPK1ENSG00000140992.142673.006201991.569500.424503.295601.91230HepG2FKBP4
PDPK1ENSG00000140992.142090.067003489.03790-0.739306.691205.01780HepG2FUS
PDPK1ENSG00000140992.143265.628505607.61790-0.7800012.1588010.81260HepG2FXR1
PDPK1ENSG00000140992.143726.568505201.72740-0.481104.564303.71810HepG2G3BP1
PDPK1ENSG00000140992.141525.226702136.53610-0.486305.217003.98350HepG2GEMIN5
PDPK1ENSG00000140992.143421.093301881.646400.8624012.4430011.17500HepG2GPKOW
PDPK1ENSG00000140992.141942.211103083.93530-0.667105.332103.78240HepG2GRSF1
PDPK1ENSG00000140992.144259.407203702.429400.202102.690501.72520HepG2HDGF
PDPK1ENSG00000140992.143010.557702463.805100.289002.570701.94520HepG2HNRNPA1
PDPK1ENSG00000140992.143827.414802177.949600.8133028.8293026.89560HepG2HNRNPF
PDPK1ENSG00000140992.142792.906405267.59490-0.9154019.1045017.42130HepG2HNRNPK
PDPK1ENSG00000140992.142911.062203481.20440-0.258005.145404.24940HepG2HNRNPL
PDPK1ENSG00000140992.143586.969601795.696700.9981019.2065017.77280HepG2HNRNPLL
PDPK1ENSG00000140992.141736.021902789.08730-0.6840012.7340010.94300HepG2HNRNPM
PDPK1ENSG00000140992.143717.804205095.05180-0.454603.446002.06930HepG2HSPD1
PDPK1ENSG00000140992.144017.463202144.640700.9054020.3343018.57250HepG2IGF2BP1
PDPK1ENSG00000140992.142921.256304962.21260-0.764403.101202.05690HepG2IGF2BP3
PDPK1ENSG00000140992.142408.727002780.87510-0.207303.206702.42200HepG2ILF2
PDPK1ENSG00000140992.144123.127103545.019400.217803.906902.70060HepG2KIF1C
PDPK1ENSG00000140992.141964.075403016.31850-0.618909.329407.36380HepG2LARP7
PDPK1ENSG00000140992.144339.979805609.57700-0.370203.081402.38900HepG2MAGOH
PDPK1ENSG00000140992.143763.370005640.92350-0.583906.209205.29390HepG2MATR3
PDPK1ENSG00000140992.141412.099602511.40020-0.830706.889405.30590HepG2METAP2
PDPK1ENSG00000140992.142447.600103271.54410-0.418605.476604.37300HepG2MSI2
PDPK1ENSG00000140992.142935.095701831.542300.680205.345403.97240HepG2MTPAP
PDPK1ENSG00000140992.143485.288605773.75850-0.728209.971108.81250HepG2NCBP2
PDPK1ENSG00000140992.142875.407803789.50180-0.398206.196905.05900HepG2NOL12
PDPK1ENSG00000140992.142440.766201592.283400.616108.073606.84350HepG2NSUN2
PDPK1ENSG00000140992.144342.856003045.025800.512102.751701.86640HepG2PABPC1
PDPK1ENSG00000140992.141707.025302694.70790-0.6586018.0058016.19420HepG2PARN
PDPK1ENSG00000140992.143099.160105101.17480-0.7190025.8211024.28600HepG2PCBP1
PDPK1ENSG00000140992.143343.463702428.191800.461408.657407.40220HepG2PPIL4
PDPK1ENSG00000140992.142335.162203472.04610-0.572303.920502.48280HepG2PRPF6
PDPK1ENSG00000140992.142628.180301845.435200.510004.752403.72570HepG2PRPF8
PDPK1ENSG00000140992.143882.743305190.45420-0.418808.603207.74860HepG2PTBP1
PDPK1ENSG00000140992.143417.036003840.02530-0.168402.471201.90390HepG2PUM1
PDPK1ENSG00000140992.143185.604503837.22570-0.268502.958502.26430HepG2PUM2
PDPK1ENSG00000140992.145350.948403950.123300.4378012.6258011.47270HepG2PUS1
PDPK1ENSG00000140992.141430.137103187.15140-1.1561011.092009.74880HepG2RAVER1
PDPK1ENSG00000140992.143525.818204358.85150-0.306003.597402.63340HepG2RBM15
PDPK1ENSG00000140992.142885.222904520.84920-0.6479017.7001016.62130HepG2RBM22
PDPK1ENSG00000140992.141842.149403637.18390-0.9814019.0560016.49130HepG2RBM27
PDPK1ENSG00000140992.142924.731905776.62830-0.9819037.5345036.03820HepG2NELFE
PDPK1ENSG00000140992.143742.947005379.87010-0.5234016.0432014.76050HepG2RECQL
PDPK1ENSG00000140992.144075.790102346.452500.7965014.4496013.11960HepG2RPLP0
PDPK1ENSG00000140992.144156.112303131.042900.408502.238901.38680HepG2RPS10
PDPK1ENSG00000140992.141599.281202334.92960-0.546007.849806.87730HepG2RPS19
PDPK1ENSG00000140992.142363.880703354.45980-0.504905.804704.67080HepG2RPS2
PDPK1ENSG00000140992.142176.413303424.16210-0.653809.093007.15720HepG2RPS5
PDPK1ENSG00000140992.143384.170504646.65120-0.457403.562702.79420HepG2SF3A3
PDPK1ENSG00000140992.143641.393301777.341401.0347023.3411021.52260HepG2SF3B1
PDPK1ENSG00000140992.144212.220505404.25900-0.359508.112007.18180HepG2SF3B4
PDPK1ENSG00000140992.144946.626603468.508600.5120018.9045017.37850HepG2SLBP
PDPK1ENSG00000140992.141941.532502827.26670-0.5422018.0520016.62660HepG2SMN1
PDPK1ENSG00000140992.142351.945603250.53580-0.466803.144602.11600HepG2SMNDC1
PDPK1ENSG00000140992.143176.238105106.09340-0.6849028.4227027.25600HepG2SRFBP1
PDPK1ENSG00000140992.143175.408805640.74320-0.8289028.0374026.87850HepG2SRSF1
PDPK1ENSG00000140992.143420.456002139.825200.6766019.9819018.42060HepG2SRSF7
PDPK1ENSG00000140992.143971.725004588.93040-0.208403.269502.67990HepG2SRSF9
PDPK1ENSG00000140992.143841.452105076.95750-0.402303.197701.82530HepG2SSRP1
PDPK1ENSG00000140992.144126.405702978.512500.470202.890901.66140HepG2SUB1
PDPK1ENSG00000140992.142706.769204061.95780-0.5856021.2360019.77000HepG2SUCLG1
PDPK1ENSG00000140992.143015.517905069.75050-0.7495023.4067021.99690HepG2TAF15
PDPK1ENSG00000140992.142813.986101750.448500.6848010.214508.94990HepG2TARDBP
PDPK1ENSG00000140992.143017.736202669.012800.177101.945201.45650HepG2TRIM56
PDPK1ENSG00000140992.144197.741303534.036200.248202.353201.55380HepG2TUFM
PDPK1ENSG00000140992.14814.304001406.97120-0.7890010.154108.70160HepG2UCHL5
PDPK1ENSG00000140992.141620.845102180.75220-0.428102.680901.69190HepG2UPF2
PDPK1ENSG00000140992.142001.260203978.53560-0.9913047.2081045.17820HepG2UTP3
PDPK1ENSG00000140992.142043.685903505.17790-0.778307.322305.66590HepG2XRCC6
PDPK1ENSG00000140992.141936.668102344.71610-0.275802.098101.45890HepG2XRN2
PDPK1ENSG00000140992.145471.802304532.166300.271706.662505.91010HepG2ZNF622
PDPK1ENSG00000140992.141199.457201493.90020-0.316703.883003.23080K562AGGF1
PDPK1ENSG00000140992.141217.136801554.44890-0.352903.069802.38060K562AKAP8L
PDPK1ENSG00000140992.143930.729601929.951101.0261022.7078021.20930K562AQR
PDPK1ENSG00000140992.141266.772401630.94950-0.364604.521003.32360K562ATP5C1
PDPK1ENSG00000140992.141415.276701785.36410-0.335103.599302.22890K562CCDC124
PDPK1ENSG00000140992.14706.90210918.61370-0.377903.211402.06150K562CSTF2
PDPK1ENSG00000140992.142164.692201755.167300.302504.011203.24610K562DDX47
PDPK1ENSG00000140992.141405.032301020.525400.461204.038702.91850K562EFTUD2
PDPK1ENSG00000140992.141762.851001092.559800.690106.853505.12650K562EIF3D
PDPK1ENSG00000140992.141149.22660868.070100.404704.569303.55800K562EIF3G
PDPK1ENSG00000140992.141432.74240960.858000.576306.725105.45770K562EIF4A3
PDPK1ENSG00000140992.141099.575401371.24890-0.318502.360501.57740K562FIP1L1
PDPK1ENSG00000140992.141663.93110999.247400.7356015.7780014.44280K562FXR1
PDPK1ENSG00000140992.141728.432202231.98620-0.368903.695502.82600K562GRSF1
PDPK1ENSG00000140992.141429.43220960.944400.572807.129606.21410K562HNRNPC
PDPK1ENSG00000140992.141422.700701859.08370-0.386003.374102.49710K562HSPD1
PDPK1ENSG00000140992.141250.517101579.14060-0.336602.495801.49240K562MAK16
PDPK1ENSG00000140992.141403.986401597.15620-0.186002.095501.43610K562NSUN2
PDPK1ENSG00000140992.14840.894301065.72990-0.341802.898401.51860K562PCBP1
PDPK1ENSG00000140992.142049.799601505.399600.445203.733502.76600K562PCBP3
PDPK1ENSG00000140992.141630.441001154.724300.497606.628005.39840K562POLR2G
PDPK1ENSG00000140992.141377.66970993.091600.472104.078203.16690K562PRPF8
PDPK1ENSG00000140992.144357.768202565.339400.7643010.988709.34780K562PUF60
PDPK1ENSG00000140992.141092.978801541.74410-0.496304.873404.17910K562PUS1
PDPK1ENSG00000140992.141235.081101502.06700-0.282302.732602.14260K562RBM15
PDPK1ENSG00000140992.141379.836901038.356800.410104.196003.33280K562SRSF1
PDPK1ENSG00000140992.141400.600701158.175000.274102.290301.54220K562SYNCRIP
PDPK1ENSG00000140992.141374.730501050.822300.387503.070902.32430K562TARDBP
PDPK1ENSG00000140992.141253.400401013.653200.306202.499701.72730K562TIA1
PDPK1ENSG00000140992.141818.083501506.871400.270803.698202.72970K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDPK1 is not available on ENCORE database.





4 RBPs can affect the splicing of PDPK1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDPK1ENSG00000140992.14chr16+258861925887722588021258813726077032607964-0.257000.000880.01851excludedHepG2U2AF1
SEPDPK1ENSG00000140992.14chr16+2588619258877225880212588137260770326079640.286000.001990.05237includedHepG2SF3A3
MXEPDPK1ENSG00000140992.14chr16+26366762636894264579326458512633412263358626471232647276-0.184000.000440.094582includedHepG2EIF3H
MXEPDPK1ENSG00000140992.14chr16+26114802611523261635626164542606896260796426274252627501-0.096000.001160.056892includedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDPK1 is not avaliable on ENCORE database.