PAPSS1

General Information

Gene Name       : PAPSS1
Gene ID             : ENSG00000138801.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PAPSS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PAPSS1ENSG00000138801.821.7520.6421.20ENCSR000AEF
HepG2PAPSS1ENSG00000138801.862.6972.9467.81ENCSR985KAT
K562PAPSS1ENSG00000138801.825.3928.1926.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PAPSS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PAPSS1 RNA is bound by 22 proteins.  







eCLIP assay for PAPSS1 is not avaliable on ENCORE database.





22 proteins are bound to PAPSS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4108535326108535409-3'-UTR,CDS,intron-Distal3.104403.34065K562IGF2BP1
chr4108534889108534972-3'-UTR,intron-Distal4.178744.42548HepG2TIAL1
chr4108535056108535138-3'-UTR,intron-Distal5.3179810.29472K562TIA1
chr4108535367108535445-3'-UTR,CDS,intron-Distal4.224913.92846K562SND1
chr4108534972108535035-3'-UTR,intron-Distal4.454785.48475K562TIA1
chr4108534882108534958-3'-UTR,intron-Distal4.7310513.43066K562TIA1
chr4108535069108535146-3'-UTR,intron-Distal3.780997.45406HepG2FUBP3
chr4108535061108535143-3'-UTR,intron-Distal4.333833.07706HepG2TIAL1
chr4108535265108535361-3'-UTR,intron-Distal5.485547.71888HepG2SUB1
chr4108534842108534891-3'-UTR,intron-Distal3.732893.00640HepG2ZC3H11A
chr4108534995108535051-3'-UTR,intron-Distal4.889759.59522K562PABPC4
chr4108565985108566062-CDS,intron-Distal3.118863.50904K562LIN28B
chr4108552877108552965-CDS,intron-Distal,intron-Proximal3.183683.20659K562SND1
chr4108565973108566013-CDS,intron-Distal3.898113.31827HepG2GRWD1
chr4108615076108615139-CDS,intron-Distal3.014123.46769K562YBX3
chr4108615054108615112-CDS,intron-Distal3.419023.94979HepG2BCLAF1
chr4108578095108578161-CDS,intron-Distal4.758066.88889HepG2G3BP1
chr4108614932108614973-CDS,intron-Distal,intron-Proximal3.448824.74886HepG2BCLAF1
chr4108622326108622382-CDS,intron-Distal,intron-Proximal4.277704.69071HepG2GRWD1
chr4108603169108603218-CDS,intron-Distal,intron-Proximal5.581149.78817HepG2BCLAF1
chr4108603218108603269-CDS,intron-Distal3.190615.40132HepG2BCLAF1
chr4108574654108574728-CDS,intron-Distal3.171637.61291HepG2BCLAF1
chr4108575865108575921-CDS,intron-Distal3.787865.98815HepG2G3BP1
chr4108539699108539782-intron-Distal3.296803.12625HepG2QKI
chr4108539656108539760-intron-Distal3.774526.95705HepG2PCBP2
chr4108600580108600644-intron-Distal4.045987.29258HepG2SUGP2
chr4108539549108539677-intron-Distal3.630663.00914HepG2PTBP1
chr4108536819108536933-intron-Distal4.029753.02234K562KHSRP
chr4108599811108599874-intron-Distal4.489464.66737HepG2MATR3
chr4108600448108600528-intron-Distal4.078125.95721HepG2MATR3
chr4108576165108576201-intron-Distal4.520053.77802HepG2U2AF2
chr4108600673108600722-intron-Distal4.525975.84463HepG2SUGP2
chr4108601842108601957-intron-Distal3.908314.61322HepG2MATR3
chr4108641111108641224-intron-Distal,intron-Proximal3.626924.76597HepG2EFTUD2
chr4108591185108591302-intron-Distal3.095833.07751K562KHSRP
chr4108600071108600150-intron-Distal3.233485.35016HepG2SUGP2
chr4108639687108639782-intron-Distal4.669614.12480HepG2HNRNPM
chr4108599830108599905-intron-Distal4.239329.30950HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PAPSS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PAPSS1 is not available on ENCORE database.

  • 132 RBPs can affect the levels of PAPSS1.  








The Knockdown/knockout RNA-Seq assay for PAPSS1 is not available on ENCORE database.





132 RBPs can affect the gene expression of PAPSS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PAPSS1ENSG00000138801.41751.725702031.24890-0.213602.283801.58020HepG2AKAP8L
PAPSS1ENSG00000138801.42179.419003561.10260-0.7084022.5725020.95710HepG2AUH
PAPSS1ENSG00000138801.41509.194602228.65150-0.562405.010603.74600HepG2BCCIP
PAPSS1ENSG00000138801.41444.285301936.50010-0.423103.271002.29440HepG2BCLAF1
PAPSS1ENSG00000138801.4552.035502038.56930-1.8847058.5250056.50100HepG2BOP1
PAPSS1ENSG00000138801.41692.341902118.38600-0.323903.578002.71690HepG2CALR
PAPSS1ENSG00000138801.42813.606203697.33200-0.394102.577201.63990HepG2CCAR1
PAPSS1ENSG00000138801.41591.899202021.30820-0.344506.237805.31160HepG2CKAP4
PAPSS1ENSG00000138801.41354.631202076.13520-0.616003.891302.97800HepG2CNOT7
PAPSS1ENSG00000138801.4874.276201871.53310-1.0981020.6680019.00690HepG2CPSF6
PAPSS1ENSG00000138801.41672.853102287.07280-0.451207.319205.68080HepG2YBX3
PAPSS1ENSG00000138801.42333.216003698.04550-0.6644026.9044025.04000HepG2DAZAP1
PAPSS1ENSG00000138801.41808.308602290.27200-0.340904.391902.95550HepG2DDX1
PAPSS1ENSG00000138801.41729.227702268.35080-0.391504.045403.23950HepG2DDX21
PAPSS1ENSG00000138801.41266.502302050.24050-0.694906.748704.82840HepG2DDX27
PAPSS1ENSG00000138801.41088.512403023.92160-1.4741033.9842032.05910HepG2DDX3X
PAPSS1ENSG00000138801.41628.042402052.14410-0.334002.789701.48990HepG2DDX47
PAPSS1ENSG00000138801.41711.554802191.23970-0.356402.350301.63090HepG2DDX55
PAPSS1ENSG00000138801.41259.969302125.25820-0.754204.843803.56480HepG2DDX59
PAPSS1ENSG00000138801.41256.851802008.68350-0.676408.944207.24880HepG2DDX5
PAPSS1ENSG00000138801.41852.974602597.51260-0.487303.942603.21530HepG2DDX6
PAPSS1ENSG00000138801.41346.936702166.01610-0.6854010.506908.74330HepG2DHX30
PAPSS1ENSG00000138801.4932.400202245.74550-1.2682047.3811044.97730HepG2DNAJC21
PAPSS1ENSG00000138801.41552.588302225.89840-0.5197013.8324012.49130HepG2DNAJC2
PAPSS1ENSG00000138801.41357.756401778.52520-0.389503.103901.93250HepG2EFTUD2
PAPSS1ENSG00000138801.41856.550302497.14970-0.427703.641402.96590HepG2EIF2S1
PAPSS1ENSG00000138801.41658.636002759.69130-0.734508.317607.21270HepG2EIF4A3
PAPSS1ENSG00000138801.41610.018103648.42010-1.1802057.8704055.06570HepG2EIF4G1
PAPSS1ENSG00000138801.41668.644203494.94020-1.0666023.6058021.45660HepG2EIF4G2
PAPSS1ENSG00000138801.43115.462004088.63890-0.392208.442407.49190HepG2ETF1
PAPSS1ENSG00000138801.4997.736101547.63110-0.633309.857407.64770HepG2FAM120A
PAPSS1ENSG00000138801.41632.073302161.25210-0.405204.450503.05410HepG2FASTKD2
PAPSS1ENSG00000138801.41347.285201823.86510-0.436903.327501.94100HepG2FKBP4
PAPSS1ENSG00000138801.4699.760601874.70880-1.421709.832907.94080HepG2FTO
PAPSS1ENSG00000138801.41058.039401555.28380-0.555806.780605.58210HepG2FUBP3
PAPSS1ENSG00000138801.43620.399502784.269700.378703.205502.46220HepG2FXR1
PAPSS1ENSG00000138801.41574.267802582.89370-0.714308.397007.27050HepG2G3BP1
PAPSS1ENSG00000138801.41205.440602121.57090-0.8156010.234709.05830HepG2GPKOW
PAPSS1ENSG00000138801.41566.561001930.19530-0.301104.071802.90070HepG2HDGF
PAPSS1ENSG00000138801.42626.046903398.64960-0.372106.540005.20530HepG2HNRNPA2B1
PAPSS1ENSG00000138801.41437.487602521.90230-0.8110014.6023013.13500HepG2HNRNPC
PAPSS1ENSG00000138801.41295.423901798.30040-0.473203.031501.44600HepG2HNRNPD
PAPSS1ENSG00000138801.41716.985502540.75930-0.5654013.1633011.75370HepG2HNRNPF
PAPSS1ENSG00000138801.42852.158803368.61130-0.240104.214703.39630HepG2HNRNPL
PAPSS1ENSG00000138801.41020.958102024.65040-0.9877016.3717015.01630HepG2HNRNPLL
PAPSS1ENSG00000138801.41216.195602505.22940-1.0426042.6764040.52970HepG2HNRNPU
PAPSS1ENSG00000138801.41511.921902501.92890-0.7267014.6147013.08750HepG2IGF2BP1
PAPSS1ENSG00000138801.41504.744702625.48180-0.8031011.205209.94400HepG2IGF2BP2
PAPSS1ENSG00000138801.41701.796902559.00980-0.5885019.8207018.06820HepG2ILF2
PAPSS1ENSG00000138801.41360.628502023.89820-0.572903.934402.33110HepG2ILF3
PAPSS1ENSG00000138801.41373.579901977.68030-0.525904.060402.56430HepG2KHDRBS1
PAPSS1ENSG00000138801.41838.459602640.73600-0.522403.875702.67070HepG2KHSRP
PAPSS1ENSG00000138801.41583.480401848.13510-0.223002.891701.85550HepG2KIF1C
PAPSS1ENSG00000138801.41516.542602785.24110-0.8770013.0533011.66860HepG2MAGOH
PAPSS1ENSG00000138801.41455.533301922.47920-0.401403.397202.50350HepG2MSI2
PAPSS1ENSG00000138801.41359.583502064.78770-0.602803.992402.81790HepG2MTPAP
PAPSS1ENSG00000138801.41656.878602866.84780-0.7910010.365809.18030HepG2NCBP2
PAPSS1ENSG00000138801.42264.821303666.97870-0.6952016.6541014.87800HepG2NOL12
PAPSS1ENSG00000138801.41252.928101795.20900-0.518805.409604.38030HepG2NSUN2
PAPSS1ENSG00000138801.41106.938801897.40510-0.777505.253804.00210HepG2PABPC1
PAPSS1ENSG00000138801.41272.968402553.20190-1.0041016.3101014.61200HepG2PABPC4
PAPSS1ENSG00000138801.41866.730602570.44420-0.461502.731001.69720HepG2PCBP2
PAPSS1ENSG00000138801.41293.320501861.70600-0.525502.913901.35000HepG2PNPT1
PAPSS1ENSG00000138801.41621.356401871.77150-0.207202.043901.37150HepG2PRPF4
PAPSS1ENSG00000138801.41278.801601690.30160-0.402503.085002.23630HepG2PRPF8
PAPSS1ENSG00000138801.42233.162103500.47490-0.6485011.1941010.10370HepG2PUF60
PAPSS1ENSG00000138801.41976.424903713.20450-0.9098025.7075023.79380HepG2PUM2
PAPSS1ENSG00000138801.42644.809702059.293900.360906.989406.08740HepG2PUS1
PAPSS1ENSG00000138801.41646.297702844.72330-0.7891019.8780018.41730HepG2QKI
PAPSS1ENSG00000138801.41685.623402356.98350-0.483707.209705.91510HepG2RBM15
PAPSS1ENSG00000138801.42876.254603417.34210-0.248703.028502.49320HepG2RBM22
PAPSS1ENSG00000138801.42103.717302685.40920-0.352202.820201.81870HepG2RBM27
PAPSS1ENSG00000138801.41422.774502005.00460-0.494903.190701.54090HepG2RBM47
PAPSS1ENSG00000138801.41291.270902736.92720-1.0838025.0583023.43400HepG2RPLP0
PAPSS1ENSG00000138801.41595.635102436.72910-0.610804.238903.07440HepG2RPS10
PAPSS1ENSG00000138801.41559.206202084.19390-0.418702.553901.78460HepG2RPS3A
PAPSS1ENSG00000138801.41964.448502528.12760-0.363902.876801.77910HepG2RPS5
PAPSS1ENSG00000138801.41283.853001672.05200-0.381102.548501.79020HepG2RRP9
PAPSS1ENSG00000138801.41175.800702231.02080-0.9241035.5746033.65770HepG2SAFB2
PAPSS1ENSG00000138801.4941.033101691.33200-0.8458010.157608.40450HepG2SERBP1
PAPSS1ENSG00000138801.41155.188902004.02840-0.7948012.5131011.11760HepG2SF3B1
PAPSS1ENSG00000138801.42111.950802734.67410-0.372806.702305.84540HepG2SF3B4
PAPSS1ENSG00000138801.42464.059903356.46450-0.4459012.2960010.99680HepG2SLBP
PAPSS1ENSG00000138801.41172.238802420.28430-1.045905.855203.64270HepG2SLTM
PAPSS1ENSG00000138801.41695.799102529.64460-0.577004.420203.19150HepG2SMNDC1
PAPSS1ENSG00000138801.41223.568202240.53260-0.872702.808101.48820HepG2SNRNP200
PAPSS1ENSG00000138801.41355.544602229.82420-0.718105.466804.35850HepG2SNRNP70
PAPSS1ENSG00000138801.42381.122103859.75600-0.6969026.3312025.19690HepG2SRFBP1
PAPSS1ENSG00000138801.43241.289802854.395600.183302.184501.75080HepG2SRSF1
PAPSS1ENSG00000138801.41511.263402156.27190-0.512803.903002.69070HepG2SRSF3
PAPSS1ENSG00000138801.42336.046303456.24100-0.5651015.3278014.02340HepG2SRSF5
PAPSS1ENSG00000138801.41658.758002496.19060-0.5896014.2195012.85510HepG2SRSF7
PAPSS1ENSG00000138801.41606.488702322.19240-0.5316012.8668011.83280HepG2SRSF9
PAPSS1ENSG00000138801.42294.384803351.17140-0.5466015.2861014.27820HepG2SSB
PAPSS1ENSG00000138801.4732.665801586.65280-1.1148013.4925011.04670HepG2STAU1
PAPSS1ENSG00000138801.43210.027503930.67090-0.292205.935705.08760HepG2SUCLG1
PAPSS1ENSG00000138801.41527.013702103.13770-0.461803.017801.62970HepG2SUGP2
PAPSS1ENSG00000138801.4879.383201603.98630-0.8671011.216709.44330HepG2SUPT6H
PAPSS1ENSG00000138801.41103.719702181.32720-0.9828014.2886012.95470HepG2SUPV3L1
PAPSS1ENSG00000138801.41411.994602565.60840-0.8616024.8132023.36140HepG2TAF15
PAPSS1ENSG00000138801.41309.871001973.29500-0.591207.161606.07210HepG2TARDBP
PAPSS1ENSG00000138801.41710.563202357.48030-0.462806.238104.98880HepG2TIA1
PAPSS1ENSG00000138801.4971.619602434.31890-1.3251045.2713043.70170HepG2TIAL1
PAPSS1ENSG00000138801.41594.720202456.05800-0.6230016.7347015.50390HepG2TRIM56
PAPSS1ENSG00000138801.41594.881302031.68800-0.349202.508601.90860HepG2U2AF1
PAPSS1ENSG00000138801.41625.646303619.89580-1.1549021.5280019.25670HepG2UBE2L3
PAPSS1ENSG00000138801.4874.537701288.56460-0.559205.256304.20420HepG2UCHL5
PAPSS1ENSG00000138801.41189.666301743.67130-0.5516011.8520010.58910HepG2UPF1
PAPSS1ENSG00000138801.41244.579301997.37980-0.682505.363803.94280HepG2UPF2
PAPSS1ENSG00000138801.4909.619901866.78640-1.0372011.817009.63270HepG2XPO5
PAPSS1ENSG00000138801.41440.123202439.31620-0.760306.677304.73740HepG2XRCC5
PAPSS1ENSG00000138801.41592.030202147.27790-0.431603.741302.90710HepG2XRN2
PAPSS1ENSG00000138801.41416.255901847.19770-0.383306.974905.98850HepG2ZC3H8
PAPSS1ENSG00000138801.41282.595901917.70520-0.5803016.0084014.96470HepG2ZNF622
PAPSS1ENSG00000138801.4683.32510945.40800-0.468404.030302.57430K562AARS
PAPSS1ENSG00000138801.4865.763001510.20870-0.8027010.514409.48070K562AQR
PAPSS1ENSG00000138801.4706.81920918.12180-0.377303.830702.24380K562DDX27
PAPSS1ENSG00000138801.4581.12360887.61160-0.611104.239202.62280K562EEF2
PAPSS1ENSG00000138801.4614.29930857.59220-0.481403.646402.58580K562EFTUD2
PAPSS1ENSG00000138801.4354.97950537.12130-0.597502.574601.60730K562EIF3A
PAPSS1ENSG00000138801.4601.56310918.19620-0.610104.771103.36780K562EIF3D
PAPSS1ENSG00000138801.4714.777401059.45260-0.567804.449003.45110K562EIF3G
PAPSS1ENSG00000138801.4810.844201216.28770-0.585006.599905.34080K562EIF4A3
PAPSS1ENSG00000138801.41704.737102129.17600-0.320704.264203.10600K562EIF4G2
PAPSS1ENSG00000138801.4816.196801061.69530-0.379403.738002.20300K562EWSR1
PAPSS1ENSG00000138801.4794.608701264.88800-0.6707011.6989010.54450K562FXR1
PAPSS1ENSG00000138801.41022.182001301.73500-0.348803.214002.05490K562HNRNPA1
PAPSS1ENSG00000138801.4304.869501034.60730-1.7628041.6890039.46590K562HNRNPC
PAPSS1ENSG00000138801.4673.69420923.84350-0.455603.908002.52500K562HNRNPF
PAPSS1ENSG00000138801.4944.878801441.50940-0.6094010.050108.36890K562HNRNPU
PAPSS1ENSG00000138801.4897.975001711.14460-0.9302018.2423015.92020K562MAGOH
PAPSS1ENSG00000138801.41209.131001707.65440-0.498006.243804.77660K562MATR3
PAPSS1ENSG00000138801.41826.467502269.39130-0.313202.890001.73070K562MSI2
PAPSS1ENSG00000138801.4884.191001142.29910-0.369504.447603.44320K562MTPAP
PAPSS1ENSG00000138801.41897.872902329.19050-0.295402.850801.33830K562NOL12
PAPSS1ENSG00000138801.4992.304101522.47230-0.617607.869606.19490K562PCBP2
PAPSS1ENSG00000138801.4761.590501010.05020-0.407303.022501.52230K562PHF6
PAPSS1ENSG00000138801.4475.76080636.72020-0.420403.041002.20080K562POLR2G
PAPSS1ENSG00000138801.4592.37900834.53660-0.494503.689802.82270K562PRPF8
PAPSS1ENSG00000138801.4730.78380927.61660-0.344102.295901.47890K562PSIP1
PAPSS1ENSG00000138801.4832.524201662.49340-0.9978022.0303020.23130K562PTBP1
PAPSS1ENSG00000138801.41813.806202323.01220-0.357003.749102.80300K562PUF60
PAPSS1ENSG00000138801.42308.039901748.500500.400403.753903.13510K562PUS1
PAPSS1ENSG00000138801.41031.648701594.06500-0.627807.954406.43040K562RBM22
PAPSS1ENSG00000138801.41187.286601553.96100-0.388303.052101.56950K562RBM34
PAPSS1ENSG00000138801.4562.22260846.24660-0.589906.031204.56550K562RCC2
PAPSS1ENSG00000138801.4598.09770916.36630-0.615505.059803.64750K562RPS3
PAPSS1ENSG00000138801.4483.30290714.10960-0.563203.037801.38770K562SERBP1
PAPSS1ENSG00000138801.4563.55750796.55450-0.499203.276802.21580K562SF3B1
PAPSS1ENSG00000138801.4965.123201446.78430-0.584108.534606.98870K562SF3B4
PAPSS1ENSG00000138801.4722.289701085.30380-0.587404.377802.15050K562SLTM
PAPSS1ENSG00000138801.4572.42920802.22780-0.486903.795502.53860K562SRFBP1
PAPSS1ENSG00000138801.4967.338701283.14210-0.407605.924804.62390K562SRPK2
PAPSS1ENSG00000138801.41296.873701629.81170-0.329703.042302.30310K562SRSF1
PAPSS1ENSG00000138801.4492.94860807.97910-0.712906.177004.61550K562SUPV3L1
PAPSS1ENSG00000138801.4855.729001649.44580-0.9468015.3582013.43190K562TARDBP
PAPSS1ENSG00000138801.41206.359301591.08460-0.399404.308403.25360K562TIA1
PAPSS1ENSG00000138801.4673.74720892.22210-0.405202.556501.66030K562TIAL1
PAPSS1ENSG00000138801.4675.73950947.77760-0.488104.038902.85140K562TRIM56
PAPSS1ENSG00000138801.41901.701701345.667600.498908.748407.55790K562UPF1
PAPSS1ENSG00000138801.4969.309501197.43760-0.304903.479002.53860K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PAPSS1 is not available on ENCORE database.





4 RBPs can affect the splicing of PAPSS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPAPSS1ENSG00000138801.4chr4-1085761231085761921085758501085760561085780511085781630.102000.000000.00009includedHepG2PRPF8
SEPAPSS1ENSG00000138801.4chr4-1085761231085761921085758501085760561085780511085781630.146000.000000.00038includedK562EFTUD2
SEPAPSS1ENSG00000138801.4chr4-1085761231085761921085758501085760561085780511085781630.062000.000000.00005includedHepG2SF3A3
MXEPAPSS1ENSG00000138801.4chr4-1086149261086151621086223261086224411086081941086083331086412751086416080.105000.003580.094481includedHepG2BCCIP
MXEPAPSS1ENSG00000138801.4chr4-1085758501085760561085761231085761921085746461085747821085780511085781630.056000.000050.003611includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PAPSS1 is not avaliable on ENCORE database.