OXSR1

General Information

Gene Name : OXSR1
Gene ID : ENSG00000172939.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: OXSR1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	OXSR1	ENSG00000172939.8	37.61	34.26	35.94	ENCSR000AEF
HepG2	OXSR1	ENSG00000172939.8	19.61	29.37	24.49	ENCSR985KAT
K562	OXSR1	ENSG00000172939.8	39.08	40.95	40.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for OXSR1 is not avaliable on ENCORE database.

Proteins bound to RNA

OXSR1 RNA is bound by 38 proteins.

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eCLIP assay for OXSR1 is not avaliable on ENCORE database.

38 proteins are bound to OXSR1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	38296239	38296268	+	3'-UTR	4.98494	59.56384	K562	UPF1
chr3	38296268	38296294	+	3'-UTR	4.84002	48.57882	K562	UPF1
chr3	38295921	38296048	+	3'-UTR	5.45238	42.75269	K562	UPF1
chr3	38295707	38295760	+	3'-UTR	6.28459	36.26667	K562	UPF1
chr3	38295846	38295917	+	3'-UTR	5.33755	35.86278	K562	UPF1
chr3	38296294	38296360	+	3'-UTR	4.64333	31.97885	K562	UPF1
chr3	38296225	38296239	+	3'-UTR	5.49320	31.36844	K562	UPF1
chr3	38295666	38295707	+	3'-UTR	5.24262	31.26248	K562	UPF1
chr3	38296218	38296225	+	3'-UTR	5.41233	29.58687	K562	UPF1
chr3	38296102	38296142	+	3'-UTR	5.07482	25.91418	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 142 entries

eCLIP assay for OXSR1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for OXSR1 is not available on ENCORE database.
108 RBPs can affect the levels of OXSR1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for OXSR1 is not available on ENCORE database.

108 RBPs can affect the gene expression of OXSR1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
OXSR1	ENSG00000172939.4	4433.21680	2612.02580	0.76310	32.55420	31.33060	HepG2	SRFBP1
OXSR1	ENSG00000172939.4	1040.08840	2265.57790	-1.12320	27.12070	25.51570	HepG2	PUF60
OXSR1	ENSG00000172939.4	873.19950	1723.05580	-0.98060	22.98360	21.80360	HepG2	TIAL1
OXSR1	ENSG00000172939.4	1048.02880	1773.19430	-0.75870	20.30480	18.77500	HepG2	HNRNPU
OXSR1	ENSG00000172939.4	4581.88630	2802.58390	0.70910	19.40090	17.79500	K562	RBM15
OXSR1	ENSG00000172939.4	4343.47330	2787.34950	0.63990	18.80040	17.44400	K562	AGGF1
OXSR1	ENSG00000172939.4	5284.07860	2876.34030	0.87730	17.60650	16.27610	K562	PUS1
OXSR1	ENSG00000172939.4	1066.77560	2407.41270	-1.17420	16.78120	14.77000	HepG2	LARP4
OXSR1	ENSG00000172939.4	2212.06220	3911.86550	-0.82250	14.18210	12.34090	K562	TARDBP
OXSR1	ENSG00000172939.4	2484.35380	3597.20520	-0.53400	12.08410	10.73560	K562	EIF2S2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 128 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for OXSR1 is not available on ENCORE database.

14 RBPs can affect the splicing of OXSR1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	OXSR1	ENSG00000172939.4	chr3	+	38284037	38284108	38278151	38278452	38284233	38284269	0.14300	0.00000	0.00003	included	HepG2	U2AF1
SE	OXSR1	ENSG00000172939.4	chr3	+	38284037	38284108	38278329	38278452	38284233	38284269	0.30600	0.00000	0.00000	included	HepG2	U2AF2
SE	OXSR1	ENSG00000172939.4	chr3	+	38265302	38265404	38263068	38263178	38266061	38266195	-0.21000	0.00000	0.00000	excluded	HepG2	U2AF2
SE	OXSR1	ENSG00000172939.4	chr3	+	38234772	38234909	38232221	38232330	38240212	38240354	0.07000	0.00000	0.00265	included	K562	ABCF1
SE	OXSR1	ENSG00000172939.4	chr3	+	38234772	38234909	38232221	38232330	38240212	38240354	-0.05100	0.00000	0.00003	excluded	K562	PUS1
SE	OXSR1	ENSG00000172939.4	chr3	+	38284233	38284269	38278151	38278452	38287565	38287712	-0.18300	0.00000	0.00000	excluded	K562	U2AF1
SE	OXSR1	ENSG00000172939.4	chr3	+	38284037	38284108	38278151	38278452	38284233	38284269	0.08600	0.00000	0.00001	included	K562	U2AF2
SE	OXSR1	ENSG00000172939.4	chr3	+	38284233	38284269	38278151	38278452	38287565	38287712	-0.18500	0.00000	0.00000	excluded	K562	U2AF2
SE	OXSR1	ENSG00000172939.4	chr3	+	38234772	38234909	38232221	38232330	38240212	38240354	-0.05300	0.00000	0.00031	excluded	K562	AGGF1
SE	OXSR1	ENSG00000172939.4	chr3	+	38284233	38284269	38278329	38278452	38287565	38287712	-0.06900	0.00001	0.00029	excluded	K562	PUS1

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

OXSR1

General Information

Functions

Localization

Domains (AlphaFold: OXSR1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for OXSR1 is not avaliable on ENCORE database.

38 proteins are bound to OXSR1 RNA:

eCLIP assay for OXSR1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for OXSR1 is not available on ENCORE database.

108 RBPs can affect the gene expression of OXSR1 :

The Knockdown/knockout RNA-Seq assay for OXSR1 is not available on ENCORE database.

14 RBPs can affect the splicing of OXSR1 :

The Knockdown/knockout RNA-Seq assay for OXSR1 is not avaliable on ENCORE database.