OXCT1

General Information

Gene Name       : OXCT1
Gene ID             : ENSG00000083720.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: OXCT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OXCT1ENSG00000083720.1281.6368.4275.03ENCSR000AEF
HepG2OXCT1ENSG00000083720.124.684.204.44ENCSR985KAT
K562OXCT1ENSG00000083720.1231.9734.2833.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OXCT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • OXCT1 RNA is bound by 14 proteins.  







eCLIP assay for OXCT1 is not avaliable on ENCORE database.





14 proteins are bound to OXCT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr54173040741730556-3'-UTR,intron-Distal4.131974.43679K562IGF2BP1
chr54173137141731435-3'-UTR,intron-Distal,intron-Proximal4.453486.88705HepG2SUB1
chr54173018441730305-3'-UTR,intron-Distal3.643944.72639K562KHSRP
chr54173135841731457-3'-UTR,intron-Distal,intron-Proximal4.317104.94898K562NOLC1
chr54173097641731086-3'-UTR,intron-Distal4.342053.25521K562LIN28B
chr54173167141731749-3'-UTR,intron-Distal,intron-Proximal5.560806.23813HepG2SUB1
chr54173168541731745-3'-UTR,intron-Distal,intron-Proximal3.941073.38244K562NOLC1
chr54187051541870584-5'-UTR,intron-Distal4.563403.69821K562DDX3X
chr54184055541840611-CDS,intron-Distal5.365746.36664K562DDX24
chr54184277441842845-CDS,intron-Distal,intron-Proximal3.733215.74135K562DDX24
chr54185024941850280-CDS,intron-Distal3.302113.36945K562ZNF622
chr54176221841762268-CDS,intron-Distal4.157823.01428K562UCHL5
chr54184056241840629-CDS,intron-Distal,intron-Proximal3.238873.65452K562BUD13
chr54185017941850249-CDS,intron-Distal5.220367.84234K562ZNF622
chr54179479541794818-CDS,intron-Distal,intron-Proximal3.279386.00087K562YBX3
chr54184277841842830-CDS,intron-Distal3.043193.19733K562ZNF622
chr54184277641842854-CDS,intron-Distal,intron-Proximal4.515064.72838K562UCHL5
chr54183257241832682-intron-Distal3.348164.32378K562HNRNPM
chr54183269941832784-intron-Distal4.164653.53404K562HNRNPM
chr54184928141849445-intron-Distal5.5647611.99536K562EXOSC5
chr54174638441746469-intron-Distal4.903797.06230K562EXOSC5
chr54180731841807418-intron-Distal,intron-Proximal4.527314.13847K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OXCT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OXCT1 is not available on ENCORE database.

  • 122 RBPs can affect the levels of OXCT1.  








The Knockdown/knockout RNA-Seq assay for OXCT1 is not available on ENCORE database.





122 RBPs can affect the gene expression of OXCT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OXCT1ENSG00000083720.899.5909063.672400.645201.906701.38470HepG2ACO1
OXCT1ENSG00000083720.8252.7393098.516601.359108.087707.22980HepG2AKAP1
OXCT1ENSG00000083720.825.7760088.27070-1.775906.296705.43550HepG2BOP1
OXCT1ENSG00000083720.834.3139063.67830-0.892002.158701.56040HepG2CKAP4
OXCT1ENSG00000083720.859.1290021.518601.458202.324701.62720HepG2CNOT7
OXCT1ENSG00000083720.8102.80460205.16430-0.996906.479105.57420HepG2CELF1
OXCT1ENSG00000083720.8140.77770220.63780-0.648303.839102.99000HepG2DAZAP1
OXCT1ENSG00000083720.8176.7677094.374200.905303.789203.06900HepG2DDX3X
OXCT1ENSG00000083720.837.8874092.02380-1.280303.434202.34780HepG2DDX59
OXCT1ENSG00000083720.829.4026075.98090-1.369704.107302.88390HepG2DDX5
OXCT1ENSG00000083720.842.1285081.06300-0.944202.194501.63810HepG2DDX6
OXCT1ENSG00000083720.829.6920060.92230-1.036902.358301.72500HepG2DKC1
OXCT1ENSG00000083720.877.93800136.65700-0.810203.655102.92530HepG2DNAJC2
OXCT1ENSG00000083720.861.04750113.42080-0.893702.748601.64610HepG2AGO1
OXCT1ENSG00000083720.851.2791086.12950-0.748101.850901.32400HepG2EIF4A3
OXCT1ENSG00000083720.8140.6057083.853300.745602.101501.49810HepG2EIF4B
OXCT1ENSG00000083720.8137.05720208.49260-0.605202.626001.83120HepG2EIF4G2
OXCT1ENSG00000083720.866.83500143.73450-1.104704.942704.18070HepG2ETF1
OXCT1ENSG00000083720.853.21760117.35380-1.140904.472303.07260HepG2FASTKD2
OXCT1ENSG00000083720.8197.06790102.027400.949603.742302.85610HepG2FIP1L1
OXCT1ENSG00000083720.845.7349085.57120-0.903802.313001.50220HepG2G3BP2
OXCT1ENSG00000083720.862.43470154.80800-1.310106.156305.15290HepG2HNRNPC
OXCT1ENSG00000083720.848.2055099.24790-1.041803.553802.74920HepG2HNRNPF
OXCT1ENSG00000083720.838.6655081.61330-1.077802.733102.04000HepG2HNRNPK
OXCT1ENSG00000083720.8123.41470200.99500-0.703604.060403.25630HepG2HNRNPL
OXCT1ENSG00000083720.832.0270070.40480-1.136402.865601.89830HepG2HNRNPM
OXCT1ENSG00000083720.8139.2844081.939800.765302.576501.92290HepG2IGF2BP2
OXCT1ENSG00000083720.8258.5335076.889901.749406.771005.27370HepG2IGF2BP3
OXCT1ENSG00000083720.8287.0401087.410101.7153013.4285012.11060HepG2MATR3
OXCT1ENSG00000083720.839.5583077.73230-0.974502.071401.41990HepG2NSUN2
OXCT1ENSG00000083720.878.37400137.16140-0.807403.395502.58600HepG2PPIL4
OXCT1ENSG00000083720.8255.9907082.679301.6304016.2285015.11620HepG2PTBP1
OXCT1ENSG00000083720.897.99560208.83670-1.091606.690905.81710HepG2PUF60
OXCT1ENSG00000083720.8312.57570221.523100.496602.489601.85320HepG2PUM2
OXCT1ENSG00000083720.8147.5090089.528600.720302.698102.08050HepG2QKI
OXCT1ENSG00000083720.869.69230126.34230-0.858302.302701.33760HepG2RCC2
OXCT1ENSG00000083720.8165.7996092.008200.849503.771303.15840HepG2NELFE
OXCT1ENSG00000083720.838.19190106.89150-1.484805.652904.72810HepG2RPLP0
OXCT1ENSG00000083720.842.93860128.82720-1.585105.590204.27150HepG2RPS10
OXCT1ENSG00000083720.850.8278021.604801.234202.368501.62510HepG2RPS3A
OXCT1ENSG00000083720.864.72800114.84750-0.827302.223201.51120HepG2RRP9
OXCT1ENSG00000083720.850.17090136.94610-1.448708.102607.08560HepG2SAFB2
OXCT1ENSG00000083720.8108.99970200.21800-0.877205.392304.46790HepG2SLBP
OXCT1ENSG00000083720.852.98690127.95800-1.272003.170401.45300HepG2SLTM
OXCT1ENSG00000083720.848.31740133.57040-1.467006.066804.60600HepG2SMNDC1
OXCT1ENSG00000083720.8198.14660135.688700.546202.508702.02360HepG2SRFBP1
OXCT1ENSG00000083720.8332.6550089.840601.8885022.9394021.86350HepG2SRSF1
OXCT1ENSG00000083720.855.9894097.50250-0.800302.441601.78470HepG2SRSF7
OXCT1ENSG00000083720.824.8485068.16250-1.455803.651902.24610HepG2STAU1
OXCT1ENSG00000083720.834.0323068.90780-1.017802.592501.68180HepG2SUPT6H
OXCT1ENSG00000083720.8213.5401080.766701.4026011.0674010.06410HepG2TAF15
OXCT1ENSG00000083720.883.93080150.76770-0.845104.234203.56560HepG2TRIM56
OXCT1ENSG00000083720.8127.1031080.037500.667202.457601.79290HepG2UPF1
OXCT1ENSG00000083720.8118.6197077.273100.618201.961501.43930HepG2UTP3
OXCT1ENSG00000083720.850.3994088.02600-0.804502.446101.92260HepG2ZNF622
OXCT1ENSG00000083720.82083.519003600.92920-0.7893013.8028011.22810K562ABCF1
OXCT1ENSG00000083720.81240.127401722.49590-0.474007.597205.09820K562AKAP1
OXCT1ENSG00000083720.82300.151702901.88770-0.335303.223102.14200K562AKAP8
OXCT1ENSG00000083720.84048.412202747.999000.558908.083506.90950K562AKAP8L
OXCT1ENSG00000083720.81271.805403595.14340-1.4992042.5002040.44670K562AQR
OXCT1ENSG00000083720.81623.089702050.72230-0.337405.141203.81730K562BCLAF1
OXCT1ENSG00000083720.8809.634101836.92090-1.1819022.7939020.34880K562BOP1
OXCT1ENSG00000083720.81648.307302508.16470-0.605606.624404.37260K562BUD13
OXCT1ENSG00000083720.82067.828002613.82840-0.338003.038401.69050K562CIRBP
OXCT1ENSG00000083720.82323.033803368.98750-0.536303.019301.90390K562CNOT7
OXCT1ENSG00000083720.82739.878003478.58070-0.344404.105002.74010K562CPEB4
OXCT1ENSG00000083720.81141.409101953.20860-0.7750014.4173012.59170K562CPSF6
OXCT1ENSG00000083720.81093.525301555.77840-0.508607.151605.32830K562CSTF2
OXCT1ENSG00000083720.83210.335705868.31720-0.8702026.7256024.19540K562CELF1
OXCT1ENSG00000083720.81351.124701798.13950-0.412306.475604.46280K562DDX27
OXCT1ENSG00000083720.81840.357803598.98450-0.9676033.1864031.19030K562DDX47
OXCT1ENSG00000083720.81368.769301769.52330-0.370504.675602.83070K562DDX6
OXCT1ENSG00000083720.81005.250701404.37630-0.482403.956102.31910K562DHX30
OXCT1ENSG00000083720.8928.368401349.13760-0.539304.568202.81850K562DNAJC21
OXCT1ENSG00000083720.8806.269101784.72720-1.1464011.255909.27050K562EFTUD2
OXCT1ENSG00000083720.81706.760602559.95090-0.584908.331507.18420K562EIF2S2
OXCT1ENSG00000083720.8653.745201276.16470-0.965007.663605.94780K562EIF3A
OXCT1ENSG00000083720.81151.765101911.21930-0.730607.140605.36000K562EIF3D
OXCT1ENSG00000083720.81445.105102052.45640-0.506208.716907.30880K562EIF3G
OXCT1ENSG00000083720.8825.329001823.42690-1.1436024.7960022.06080K562EIF4A3
OXCT1ENSG00000083720.81092.287101642.09110-0.588209.918107.61100K562EIF4B
OXCT1ENSG00000083720.83655.129404772.47030-0.384807.156205.65930K562EIF4G2
OXCT1ENSG00000083720.81789.013802752.11790-0.621405.139802.84640K562ESF1
OXCT1ENSG00000083720.81892.223602588.40310-0.452004.950303.79380K562FIP1L1
OXCT1ENSG00000083720.8956.311601638.68400-0.777006.154004.35260K562FKBP4
OXCT1ENSG00000083720.81118.149201987.27630-0.8297012.8997010.98470K562FMR1
OXCT1ENSG00000083720.8778.634301684.36680-1.1132018.3963015.88710K562FTO
OXCT1ENSG00000083720.81582.295201896.28660-0.261202.780202.17360K562FXR1
OXCT1ENSG00000083720.81606.701002392.37260-0.5743011.032008.89710K562GLRX3
OXCT1ENSG00000083720.8702.179501864.86130-1.4092036.3995033.31400K562GPKOW
OXCT1ENSG00000083720.81026.971003411.68560-1.7321030.5903028.01160K562GRSF1
OXCT1ENSG00000083720.82172.704303152.95770-0.537203.397001.63380K562HNRNPAB
OXCT1ENSG00000083720.81029.464001889.18380-0.875906.453705.57990K562HNRNPC
OXCT1ENSG00000083720.8835.877902435.98210-1.5431029.2628025.66850K562HNRNPK
OXCT1ENSG00000083720.81640.774603252.63710-0.9872024.4795021.48920K562HNRNPL
OXCT1ENSG00000083720.8308.360302128.96140-2.7875087.6279083.55800K562HNRNPM
OXCT1ENSG00000083720.81994.109702418.72250-0.278503.143902.19480K562HNRNPU
OXCT1ENSG00000083720.82363.679603509.37730-0.570207.802506.48410K562HSPD1
OXCT1ENSG00000083720.82028.895102480.12330-0.289702.406601.31690K562IGF2BP3
OXCT1ENSG00000083720.8824.992501266.89800-0.618805.044003.04210K562KHDRBS1
OXCT1ENSG00000083720.8682.936101592.28630-1.2213016.1501013.73500K562KRR1
OXCT1ENSG00000083720.81523.074002563.07060-0.7509013.9595011.94790K562MAGOH
OXCT1ENSG00000083720.8911.293901820.30100-0.9982020.6660018.23180K562METAP2
OXCT1ENSG00000083720.83883.548505086.94470-0.389404.114802.73660K562MSI2
OXCT1ENSG00000083720.81184.467802515.28490-1.0865045.9926043.46790K562MTPAP
OXCT1ENSG00000083720.81334.727801820.80660-0.448005.647503.90400K562NCBP2
OXCT1ENSG00000083720.84169.647305220.35840-0.324203.077801.49990K562NOL12
OXCT1ENSG00000083720.81525.136302794.61180-0.8737044.2874041.92860K562NSUN2
OXCT1ENSG00000083720.81940.807103236.61450-0.737805.676003.89280K562PABPC1
OXCT1ENSG00000083720.81118.048802280.64550-1.0285017.4102014.84420K562PCBP2
OXCT1ENSG00000083720.83812.761304903.87150-0.363105.230703.33650K562PNPT1
OXCT1ENSG00000083720.81993.585202938.29600-0.559606.936405.53300K562PPIG
OXCT1ENSG00000083720.81068.737401736.73690-0.700507.526906.28870K562PRPF8
OXCT1ENSG00000083720.81049.731801693.73460-0.690203.328002.32370K562PSIP1
OXCT1ENSG00000083720.82924.126602490.123300.231702.017301.43320K562PTBP1
OXCT1ENSG00000083720.82232.290205207.09800-1.2220034.8432031.93270K562PUF60
OXCT1ENSG00000083720.84557.111805538.75980-0.281403.601902.37480K562PUM1
OXCT1ENSG00000083720.83669.298105426.68980-0.5646014.6405012.45820K562PUM2
OXCT1ENSG00000083720.81408.044902388.17170-0.7622012.4349010.45770K562RBM22
OXCT1ENSG00000083720.81615.847001988.48630-0.299402.823601.48080K562RBM25
OXCT1ENSG00000083720.81429.433902984.53790-1.062106.652503.97900K562RBM39
OXCT1ENSG00000083720.8882.477201769.29210-1.0035011.7728010.06120K562RPS19
OXCT1ENSG00000083720.81073.969601419.56420-0.402502.982201.94010K562RPS3
OXCT1ENSG00000083720.81249.018902218.42030-0.828703.596502.16500K562SF1
OXCT1ENSG00000083720.81160.752802757.71080-1.2484051.1177048.31280K562SF3A3
OXCT1ENSG00000083720.8877.990301773.44830-1.0143014.4061012.11920K562SF3B1
OXCT1ENSG00000083720.81007.835202179.84850-1.1130031.1825028.02720K562SF3B4
OXCT1ENSG00000083720.8957.507001381.99770-0.529404.279602.67920K562SLBP
OXCT1ENSG00000083720.81003.341201464.44170-0.545503.508602.31840K562SRFBP1
OXCT1ENSG00000083720.81881.984402825.34710-0.5862018.1369016.04500K562SRPK2
OXCT1ENSG00000083720.82882.944302441.060500.239902.150801.51910K562SRSF1
OXCT1ENSG00000083720.82178.412703106.30280-0.511905.250803.44480K562STAU1
OXCT1ENSG00000083720.8759.519601681.94800-1.1470012.090309.93210K562SUPV3L1
OXCT1ENSG00000083720.8847.128501730.14260-1.030208.323106.48250K562TRIM56
OXCT1ENSG00000083720.82172.163903028.10870-0.479304.970902.99350K562TRIP6
OXCT1ENSG00000083720.82655.041203052.46300-0.201202.606901.37930K562TROVE2
OXCT1ENSG00000083720.8824.956602032.15870-1.3006023.3254019.97320K562U2AF1
OXCT1ENSG00000083720.81274.092402098.58260-0.7199013.9183012.09920K562U2AF2
OXCT1ENSG00000083720.84850.323505871.04750-0.275502.785001.38000K562UBE2L3
OXCT1ENSG00000083720.81147.357401779.92910-0.633505.814504.28620K562UCHL5
OXCT1ENSG00000083720.81305.635902963.19370-1.1824058.6800056.03580K562UPF1
OXCT1ENSG00000083720.81934.436902671.40550-0.465704.094202.62630K562UTP3
OXCT1ENSG00000083720.81936.531102535.49890-0.388804.514203.38260K562WDR3
OXCT1ENSG00000083720.81977.332102636.70950-0.415209.011807.57460K562WDR43
OXCT1ENSG00000083720.83152.711104260.15530-0.434305.700403.84690K562WRN
OXCT1ENSG00000083720.81319.851701812.14070-0.457302.961701.69700K562XRN2
OXCT1ENSG00000083720.82479.656304049.76660-0.7077012.5208010.53690K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OXCT1 is not available on ENCORE database.





7 RBPs can affect the splicing of OXCT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEOXCT1ENSG00000083720.8chr5-417622054176230241749628417497094179410441794237-0.090000.000650.01470excludedK562SF3B4
SEOXCT1ENSG00000083720.8chr5-417947784179485141794104417941804180112341801172-0.063000.007250.06296excludedK562AQR
SEOXCT1ENSG00000083720.8chr5-417620994176230241749628417497094179410441794180-0.069000.010180.08238excludedK562AQR
SEOXCT1ENSG00000083720.8chr5-417947784179485141794104417941804180112341801172-0.056000.000790.01405excludedK562PUS1
SEOXCT1ENSG00000083720.8chr5-417622124176230241749628417497094179410441794237-0.054000.001120.02475excludedK562U2AF1
SEOXCT1ENSG00000083720.8chr5-417947784179485141794104417941804180112341801172-0.205000.000040.00992excludedK562HNRNPM
SEOXCT1ENSG00000083720.8chr5-417947784179485141794104417941804180112341801172-0.107000.000310.00756excludedK562U2AF2
SEOXCT1ENSG00000083720.8chr5-417622124176230241749628417497094179410441794180-0.125000.000000.00000excludedK562U2AF2
A3SSOXCT1ENSG00000083720.8chr5-418535204185373041853520418536164186141541861506-0.055000.012690.06484shorterK562AQR
MXEOXCT1ENSG00000083720.8chr5-41794778417948514180038841800431417941044179418041801123418011720.053000.003450.050291includedK562U2AF1
MXEOXCT1ENSG00000083720.8chr5-41794778417948514180038841800431417941044179418041801123418011720.110000.000000.000031includedK562U2AF2
MXEOXCT1ENSG00000083720.8chr5-4180317041803265418056734180578341801123418011724180743241807540-0.163000.000020.006252includedK562AARS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for OXCT1 is not avaliable on ENCORE database.