NUDT3

General Information

Gene Name : NUDT3
Gene ID : ENSG00000272325.1
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NUDT3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NUDT3	ENSG00000272325.1	21.92	19.42	20.67	ENCSR000AEF
HepG2	NUDT3	ENSG00000272325.1	11.85	15.63	13.74	ENCSR985KAT
K562	NUDT3	ENSG00000272325.1	39.62	37.67	38.64	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NUDT3 is not avaliable on ENCORE database.

Proteins bound to RNA

NUDT3 RNA is bound by 38 proteins.

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eCLIP assay for NUDT3 is not avaliable on ENCORE database.

38 proteins are bound to NUDT3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	34256244	34256342	-	3'-UTR,intron-Distal	3.67256	400.00000	K562	FAM120A
chr6	34256238	34256312	-	3'-UTR,intron-Distal	3.61037	76.70606	K562	PUM2
chr6	34256221	34256244	-	3'-UTR,intron-Distal	3.30550	35.07199	K562	FAM120A
chr6	34256245	34256340	-	3'-UTR,intron-Distal	3.03989	33.67003	K562	UPF1
chr6	34256290	34256339	-	3'-UTR,intron-Distal	4.65094	26.67638	K562	TIA1
chr6	34360279	34360421	-	5'-UTR,intron-Distal	4.00797	25.22709	K562	GEMIN5
chr6	34256074	34256136	-	3'-UTR,intron-Distal	3.44592	24.14096	K562	FAM120A
chr6	34256312	34256344	-	3'-UTR,intron-Distal	3.59084	23.48030	K562	PUM2
chr6	34334098	34334157	-	intron-Distal	5.13245	19.10366	K562	PTBP1
chr6	34302647	34302694	-	intron-Distal	6.44525	17.90562	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 104 entries

eCLIP assay for NUDT3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NUDT3 is not available on ENCORE database.
100 RBPs can affect the levels of NUDT3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NUDT3 is not available on ENCORE database.

100 RBPs can affect the gene expression of NUDT3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NUDT3	ENSG00000272325.1	930.95630	2469.17600	-1.40720	81.46220	78.89640	HepG2	ZC3H8
NUDT3	ENSG00000272325.1	2240.45690	5660.67660	-1.33720	49.44950	47.08200	K562	HNRNPC
NUDT3	ENSG00000272325.1	1170.36710	2069.50540	-0.82230	25.42950	23.74350	HepG2	HNRNPU
NUDT3	ENSG00000272325.1	6268.47520	9807.36590	-0.64580	24.61330	22.85800	K562	DDX47
NUDT3	ENSG00000272325.1	920.12900	2027.92580	-1.14010	23.51670	21.80180	HepG2	TARDBP
NUDT3	ENSG00000272325.1	2916.19440	5199.78140	-0.83440	22.72590	20.58700	K562	POLR2G
NUDT3	ENSG00000272325.1	3180.17340	5905.67080	-0.89300	20.36040	17.90090	K562	EIF4A3
NUDT3	ENSG00000272325.1	3002.82160	5678.03660	-0.91910	19.18120	17.18860	K562	PRPF8
NUDT3	ENSG00000272325.1	1613.67020	2506.84890	-0.63550	18.21420	16.72650	HepG2	UPF1
NUDT3	ENSG00000272325.1	2876.48480	5783.15920	-1.00760	17.35520	15.29770	K562	RPS19
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NUDT3 is not available on ENCORE database.

12 RBPs can affect the splicing of NUDT3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NUDT3	ENSG00000272325.1	chr6	-	34338037	34338269			34309638	34309749	34360040	34360451	0.30600	0.00000	0.00000	included	K562	U2AF2
MXE	NUDT3	ENSG00000272325.1	chr6	-	34263417	34263462	34309638	34309749	34261227	34261312	34360040	34360451	0.13500	0.00000	0.00021	1included	K562	RBM15
MXE	NUDT3	ENSG00000272325.1	chr6	-	34263417	34263462	34309638	34309749	34261227	34261312	34360040	34360451	0.18900	0.00000	0.00000	1included	K562	PUS1
MXE	NUDT3	ENSG00000272325.1	chr6	-	34263417	34263462	34309638	34309749	34261227	34261312	34360040	34360451	0.11000	0.00007	0.00438	1included	K562	AGGF1
MXE	NUDT3	ENSG00000272325.1	chr6	-	34263417	34263462	34309638	34309749	34247455	34256708	34360040	34360451	-0.13800	0.00036	0.00878	2included	K562	SF3B4
MXE	NUDT3	ENSG00000272325.1	chr6	-	34261227	34261312	34263417	34263462	34247455	34256708	34309638	34309749	0.09500	0.00092	0.01474	1included	HepG2	SFPQ
MXE	NUDT3	ENSG00000272325.1	chr6	-	34263417	34263462	34309638	34309749	34261227	34261312	34360040	34360451	0.09300	0.00101	0.05478	1included	K562	UTP18
MXE	NUDT3	ENSG00000272325.1	chr6	-	34261227	34261312	34263417	34263462	34247455	34256708	34309638	34309749	0.10100	0.00132	0.09762	1included	K562	ZNF800
MXE	NUDT3	ENSG00000272325.1	chr6	-	34261227	34261312	34263417	34263462	34247455	34256708	34309638	34309749	0.09600	0.00151	0.03647	1included	K562	TARDBP
MXE	NUDT3	ENSG00000272325.1	chr6	-	34263417	34263462	34309638	34309749	34261227	34261312	34360040	34360451	0.09300	0.00166	0.03932	1included	K562	TARDBP

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NUDT3

General Information

Functions

Localization

Domains (AlphaFold: NUDT3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NUDT3 is not avaliable on ENCORE database.

38 proteins are bound to NUDT3 RNA:

eCLIP assay for NUDT3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NUDT3 is not available on ENCORE database.

100 RBPs can affect the gene expression of NUDT3 :

The Knockdown/knockout RNA-Seq assay for NUDT3 is not available on ENCORE database.

12 RBPs can affect the splicing of NUDT3 :

The Knockdown/knockout RNA-Seq assay for NUDT3 is not avaliable on ENCORE database.