RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr1 | 115250417 | 115250472 | - | 3'-UTR,intron-Distal | 5.45794 | 26.56125 | K562 | LIN28B |
chr1 | 115249488 | 115249553 | - | 3'-UTR,intron-Distal | 3.19808 | 24.91371 | K562 | PUM2 |
chr1 | 115251156 | 115251218 | - | 3'-UTR,CDS,intron-Distal | 6.16316 | 21.80419 | K562 | LIN28B |
chr1 | 115259277 | 115259367 | - | 5'-UTR,intron-Distal | 5.15834 | 20.62771 | K562 | DDX3X |
chr1 | 115249463 | 115249539 | - | 3'-UTR,intron-Distal | 4.70316 | 18.01794 | K562 | IGF2BP2 |
chr1 | 115249158 | 115249225 | - | 3'-UTR,intron-Distal | 3.47629 | 16.18067 | K562 | FAM120A |
chr1 | 115248376 | 115248481 | - | 3'-UTR,intron-Distal | 4.03770 | 15.92201 | K562 | UPF1 |
chr1 | 115249445 | 115249545 | - | 3'-UTR,intron-Distal | 3.55092 | 13.34023 | K562 | FAM120A |
chr1 | 115251150 | 115251156 | - | 3'-UTR,intron-Distal,intron-Proximal | 5.53458 | 12.79926 | K562 | LIN28B |
chr1 | 115250788 | 115250813 | - | 3'-UTR,intron-Distal | 5.42930 | 11.00359 | K562 | LIN28B |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
NRAS | ENSG00000213281.4 | 916.19990 | 3435.20250 | -1.90670 | 140.49530 | 138.36380 | HepG2 | SSB | |
NRAS | ENSG00000213281.4 | 1377.59020 | 3473.25800 | -1.33410 | 69.93300 | 68.11720 | HepG2 | NELFE | |
NRAS | ENSG00000213281.4 | 5231.27550 | 2746.67850 | 0.92940 | 62.27210 | 60.56850 | HepG2 | ZNF622 | |
NRAS | ENSG00000213281.4 | 687.54160 | 2322.71150 | -1.75630 | 57.66770 | 55.51500 | HepG2 | HNRNPA1 | |
NRAS | ENSG00000213281.4 | 1620.11300 | 3234.91640 | -0.99760 | 42.07230 | 40.24300 | HepG2 | RECQL | |
NRAS | ENSG00000213281.4 | 801.26000 | 2436.05140 | -1.60420 | 38.60830 | 36.16250 | HepG2 | XRN2 | |
NRAS | ENSG00000213281.4 | 1137.34630 | 2234.71240 | -0.97440 | 33.28920 | 31.61370 | HepG2 | DKC1 | |
NRAS | ENSG00000213281.4 | 1101.04140 | 2026.99240 | -0.88050 | 26.53830 | 24.61650 | HepG2 | PRPF4 | |
NRAS | ENSG00000213281.4 | 1498.22330 | 3256.63930 | -1.12010 | 21.69490 | 19.76830 | HepG2 | ASCC1 | |
NRAS | ENSG00000213281.4 | 5774.37820 | 3956.43070 | 0.54540 | 20.31330 | 19.28220 | HepG2 | SRFBP1 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A3SS | NRAS | ENSG00000213281.4 | chr1 | - | 115250774 | 115250905 | 115250774 | 115250813 | 115251151 | 115251398 | 0.09600 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
SE | NRAS | ENSG00000213281.4 | chr1 | - | 115256420 | 115256599 | 115252189 | 115252349 | 115258670 | 115258798 | -0.05200 | 0.00027 | 0.04153 | excluded | K562 | RBM22 | |||
A5SS | NRAS | ENSG00000213281.4 | chr1 | - | 115251151 | 115251398 | 115251248 | 115251398 | 115250774 | 115250813 | -0.07300 | 0.00108 | 0.01980 | shorter | K562 | AQR | |||
SE | NRAS | ENSG00000213281.4 | chr1 | - | 115256420 | 115256588 | 115252189 | 115252349 | 115258670 | 115258798 | -0.07900 | 0.00270 | 0.04641 | excluded | K562 | SRSF1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".