LPHN2

General Information

Gene Name       : LPHN2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LPHN2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LPHN2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LPHN2 RNA is bound by 8 proteins.  







eCLIP assay for LPHN2 is not avaliable on ENCORE database.





8 proteins are bound to LPHN2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr18230266382302726+3'-UTR,5'-UTR,CDS4.570615.03746HepG2BCLAF1
chr18240243182402520+CDS3.844364.76554HepG2BCLAF1
chr18243170482431791+CDS,intron-Distal,intron-Proximal4.277346.98523HepG2U2AF2
chr18245258382452656+CDS,intron-Distal,intron-Proximal4.024525.57156HepG2QKI
chr18242162882421745+CDS,intron-Distal,intron-Proximal3.339634.26492HepG2BCLAF1
chr18226879882268897+intron-Distal4.609845.84605HepG2CSTF2T
chr18245272882452792+intron-Distal,intron-Proximal4.560063.83958HepG2QKI
chr18226848882268556+intron-Distal3.817923.63122HepG2PRPF4
chr18226666882266751+intron-Distal5.786978.97384HepG2DDX3X
chr18227851782278611+intron-Distal3.984063.55640HepG2QKI
chr18226864182268714+intron-Distal3.024884.24473HepG2CSTF2T
chr18243005182430104+intron-Distal5.736538.57494HepG2U2AF2
chr18228907182289153+intron-Distal5.7262310.39091HepG2PCBP2
chr18226769182267723+intron-Distal4.334984.36317HepG2DDX3X
chr18228898782289130+intron-Distal4.280443.03891HepG2PTBP1
chr18226773382267793+intron-Distal3.834983.38145HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LPHN2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LPHN2 is not available on ENCORE database.

  • 122 RBPs can affect the levels of LPHN2.  








The Knockdown/knockout RNA-Seq assay for LPHN2 is not available on ENCORE database.





122 RBPs can affect the gene expression of LPHN2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LPHN2ENSG00000117114.15544.696201216.43560-1.1591016.1683014.23710HepG2ABCF1
LPHN2ENSG00000117114.15621.73220836.61280-0.428305.053304.27940HepG2ACO1
LPHN2ENSG00000117114.15583.235701055.96270-0.8564010.817609.02390HepG2ADAR
LPHN2ENSG00000117114.151114.946701802.62660-0.693106.679405.89350HepG2AKAP1
LPHN2ENSG00000117114.15709.647801075.40830-0.599704.955203.57520HepG2AKAP8
LPHN2ENSG00000117114.15652.53570840.60600-0.365403.611302.74770HepG2AKAP8L
LPHN2ENSG00000117114.15277.66290741.31130-1.4167016.2970013.85150HepG2BCCIP
LPHN2ENSG00000117114.151511.54420731.790501.0464018.8566017.50130HepG2BOP1
LPHN2ENSG00000117114.151885.395701262.003900.579108.740207.47860HepG2CALR
LPHN2ENSG00000117114.151120.496101752.91630-0.645605.385104.00710HepG2CCAR1
LPHN2ENSG00000117114.15966.271601417.07280-0.552405.187804.14660HepG2CIRBP
LPHN2ENSG00000117114.15602.47280836.50620-0.473506.270405.34230HepG2CKAP4
LPHN2ENSG00000117114.151056.96860671.799100.653706.738505.70010HepG2CPSF6
LPHN2ENSG00000117114.15330.05980458.00700-0.472602.485001.46180HepG2CSTF2
LPHN2ENSG00000117114.15731.983201200.88270-0.7142012.7304011.54770HepG2CELF1
LPHN2ENSG00000117114.152012.479001291.147700.6402019.1478017.52420HepG2DAZAP1
LPHN2ENSG00000117114.15486.27050773.78150-0.6702011.047109.60390HepG2DDX19B
LPHN2ENSG00000117114.15371.05880932.99180-1.3302022.2315020.55900HepG2DDX21
LPHN2ENSG00000117114.15736.09460912.60020-0.310102.312101.48480HepG2DDX24
LPHN2ENSG00000117114.15381.57950552.26410-0.533402.719901.34350HepG2DDX28
LPHN2ENSG00000117114.15531.312301726.86230-1.7005036.2722034.28420HepG2DDX3X
LPHN2ENSG00000117114.15663.95820952.91190-0.521305.219303.42590HepG2DDX52
LPHN2ENSG00000117114.15382.38400728.82510-0.930607.698306.48670HepG2DDX55
LPHN2ENSG00000117114.15892.933801483.21640-0.732107.208706.25080HepG2DDX6
LPHN2ENSG00000117114.15442.33630800.43120-0.8556014.0027012.72120HepG2DKC1
LPHN2ENSG00000117114.15802.939001053.95140-0.392405.551204.67370HepG2DNAJC2
LPHN2ENSG00000117114.15453.443501136.99340-1.3262022.1701020.00740HepG2EEF2
LPHN2ENSG00000117114.15491.16530947.90360-0.9485012.131809.84590HepG2EFTUD2
LPHN2ENSG00000117114.152010.967501426.044500.495804.291503.56230HepG2EIF2S1
LPHN2ENSG00000117114.15713.06320922.80530-0.372002.924401.72060HepG2EIF2S2
LPHN2ENSG00000117114.15551.67110880.79060-0.675008.339706.65800HepG2EIF3G
LPHN2ENSG00000117114.15785.213801576.03990-1.0051012.9622011.60620HepG2EIF4A3
LPHN2ENSG00000117114.15947.278401534.31830-0.695705.446804.50560HepG2EIF4B
LPHN2ENSG00000117114.151516.309201273.879200.251202.701701.87250HepG2EIF4G1
LPHN2ENSG00000117114.151595.192301220.279900.386403.343902.45410HepG2EIF4G2
LPHN2ENSG00000117114.15750.865201053.77120-0.488904.172202.85420HepG2ESF1
LPHN2ENSG00000117114.15755.321901198.87070-0.6665011.8957010.78990HepG2ETF1
LPHN2ENSG00000117114.15545.69110817.58700-0.583305.940504.71460HepG2EWSR1
LPHN2ENSG00000117114.15651.16430824.88710-0.341202.574901.45040HepG2FAM120A
LPHN2ENSG00000117114.15736.801601228.31740-0.737307.204006.02250HepG2FIP1L1
LPHN2ENSG00000117114.151333.932701019.802700.387303.436902.56360HepG2FUBP3
LPHN2ENSG00000117114.15621.003401228.57470-0.984306.022104.42330HepG2FUS
LPHN2ENSG00000117114.15686.445601589.87640-1.2117020.9907019.26630HepG2FXR1
LPHN2ENSG00000117114.15987.551501474.99170-0.578805.164704.26760HepG2G3BP1
LPHN2ENSG00000117114.151011.809701565.69910-0.629906.717405.31650HepG2G3BP2
LPHN2ENSG00000117114.15467.66520821.83470-0.813408.967607.39950HepG2GEMIN5
LPHN2ENSG00000117114.15484.64720761.46970-0.651905.109004.25640HepG2GPKOW
LPHN2ENSG00000117114.15532.60240880.09270-0.724605.032603.52860HepG2GRSF1
LPHN2ENSG00000117114.151038.93070798.771300.379104.581803.35260HepG2HDGF
LPHN2ENSG00000117114.15331.654501073.46150-1.6945037.7565035.91280HepG2HNRNPA1
LPHN2ENSG00000117114.15809.912101194.04940-0.560005.775604.80180HepG2HNRNPC
LPHN2ENSG00000117114.151050.222301493.21660-0.507704.916704.00670HepG2HNRNPK
LPHN2ENSG00000117114.15965.54970726.690600.409902.759902.13100HepG2HNRNPLL
LPHN2ENSG00000117114.15457.42690847.51220-0.8897012.2458010.49010HepG2HNRNPM
LPHN2ENSG00000117114.15672.281301186.15350-0.8192018.7443017.27410HepG2HNRNPU
LPHN2ENSG00000117114.15786.258201499.34960-0.9313013.0084011.66750HepG2IGF2BP2
LPHN2ENSG00000117114.15573.55900926.85640-0.692404.702702.96280HepG2ILF3
LPHN2ENSG00000117114.15665.210401850.37010-1.4759024.3363021.82390HepG2LARP4
LPHN2ENSG00000117114.15647.92000916.18460-0.499804.033202.65590HepG2LARP7
LPHN2ENSG00000117114.15421.10310962.21070-1.1922018.6359015.83260HepG2LIN28B
LPHN2ENSG00000117114.15650.37780919.32000-0.499303.757701.76760HepG2LSM11
LPHN2ENSG00000117114.15769.224101590.43020-1.0479015.7390014.23670HepG2MAGOH
LPHN2ENSG00000117114.15551.15090776.01070-0.493603.323301.56260HepG2MARK2
LPHN2ENSG00000117114.151098.750201599.37750-0.541604.428703.64780HepG2MATR3
LPHN2ENSG00000117114.15615.82800966.03990-0.649603.898702.65290HepG2METAP2
LPHN2ENSG00000117114.15730.52350994.16100-0.444503.942502.98150HepG2MSI2
LPHN2ENSG00000117114.15667.836101637.08900-1.2936022.1835020.50320HepG2NCBP2
LPHN2ENSG00000117114.15446.35070669.06000-0.584002.290401.30640HepG2NONO
LPHN2ENSG00000117114.15756.571001079.79560-0.513204.870602.76680HepG2NUP35
LPHN2ENSG00000117114.151154.859201458.10580-0.336401.925701.31470HepG2PABPC4
LPHN2ENSG00000117114.15744.172301174.06140-0.6578011.7866010.23540HepG2PARN
LPHN2ENSG00000117114.15872.012401443.33930-0.7270012.5463011.40240HepG2PCBP1
LPHN2ENSG00000117114.15777.196601163.10340-0.581602.948301.87770HepG2PCBP2
LPHN2ENSG00000117114.15563.77350763.30520-0.437103.801902.35250HepG2PKM
LPHN2ENSG00000117114.15502.26210852.57420-0.763404.897602.91140HepG2PNPT1
LPHN2ENSG00000117114.15723.070101222.78300-0.758003.711302.30940HepG2PRPF6
LPHN2ENSG00000117114.15251.88990562.43540-1.1589011.240509.76830HepG2PRPF8
LPHN2ENSG00000117114.15619.429201045.81120-0.755603.744601.68150HepG2PSIP1
LPHN2ENSG00000117114.15867.265101468.59790-0.7599017.1578016.01830HepG2PTBP1
LPHN2ENSG00000117114.15732.557601222.18930-0.738509.988008.95260HepG2PUF60
LPHN2ENSG00000117114.151079.644901297.43910-0.265102.975702.36580HepG2PUM1
LPHN2ENSG00000117114.151519.799001296.472000.229201.888101.32810HepG2PUM2
LPHN2ENSG00000117114.15572.39450852.15540-0.574108.474707.49730HepG2PUS1
LPHN2ENSG00000117114.151139.226301590.64250-0.481606.697605.78780HepG2QKI
LPHN2ENSG00000117114.15683.823701002.04520-0.551306.997306.26240HepG2RBM22
LPHN2ENSG00000117114.15718.957301104.74190-0.619705.623004.19590HepG2RBM27
LPHN2ENSG00000117114.15509.30830897.09650-0.816706.381904.77200HepG2RCC2
LPHN2ENSG00000117114.15571.788201634.45320-1.5153057.9030056.18580HepG2NELFE
LPHN2ENSG00000117114.15690.755001522.18990-1.1399035.7302033.99730HepG2RECQL
LPHN2ENSG00000117114.15577.45850741.31610-0.360402.333801.69770HepG2RPLP0
LPHN2ENSG00000117114.15345.08480898.10870-1.3799026.5774024.99680HepG2RPS19
LPHN2ENSG00000117114.15542.338801018.91390-0.9098011.094209.57850HepG2RPS2
LPHN2ENSG00000117114.15648.23930954.39800-0.558103.577102.66680HepG2RPS3A
LPHN2ENSG00000117114.15732.151801040.03710-0.506403.850902.56670HepG2RPS5
LPHN2ENSG00000117114.15285.74220556.38520-0.961405.516604.44110HepG2RRP9
LPHN2ENSG00000117114.151315.095701056.309200.316004.044903.29120HepG2SAFB2
LPHN2ENSG00000117114.15611.54700901.43260-0.559804.594103.39840HepG2SERBP1
LPHN2ENSG00000117114.15813.715401344.23880-0.724206.436705.38350HepG2SF3A3
LPHN2ENSG00000117114.151518.55020719.241501.0780019.2158017.53530HepG2SF3B1
LPHN2ENSG00000117114.151040.360001529.09650-0.5556010.194509.16680HepG2SF3B4
LPHN2ENSG00000117114.151347.236101171.952900.201002.147401.51540HepG2SLBP
LPHN2ENSG00000117114.15723.774001231.81320-0.7672019.4542017.98340HepG2SMN1
LPHN2ENSG00000117114.15855.239201143.44590-0.419002.265501.40800HepG2SMNDC1
LPHN2ENSG00000117114.15683.409601596.00630-1.2236030.6903029.48960HepG2SRSF1
LPHN2ENSG00000117114.15541.84780774.01620-0.514503.042801.98540HepG2SRSF3
LPHN2ENSG00000117114.15516.62920982.69850-0.9276019.7186018.61800HepG2SSB
LPHN2ENSG00000117114.15428.74160830.10330-0.953209.240307.14410HepG2STIP1
LPHN2ENSG00000117114.151093.22370829.454100.398303.742302.66240HepG2SUPT6H
LPHN2ENSG00000117114.15271.99700725.59380-1.4156016.3542014.94890HepG2SUPV3L1
LPHN2ENSG00000117114.15751.056701434.44340-0.9335022.1802020.80690HepG2TAF15
LPHN2ENSG00000117114.15363.730301152.48730-1.6638046.9128045.31890HepG2TIAL1
LPHN2ENSG00000117114.15886.923701162.87820-0.390805.068204.35120HepG2TRIM56
LPHN2ENSG00000117114.15503.58890733.46260-0.542503.471701.71350HepG2TROVE2
LPHN2ENSG00000117114.15729.176501050.76920-0.527104.471703.68230HepG2U2AF1
LPHN2ENSG00000117114.15292.76780428.67130-0.550103.003102.21500HepG2UCHL5
LPHN2ENSG00000117114.15875.026301192.13620-0.446204.727903.85570HepG2UPF1
LPHN2ENSG00000117114.15364.18990664.57900-0.867705.329103.91150HepG2UPF2
LPHN2ENSG00000117114.15858.273801150.95770-0.423305.528304.72970HepG2UTP3
LPHN2ENSG00000117114.15605.15420854.83740-0.498302.903201.77430HepG2XPO5
LPHN2ENSG00000117114.15829.375401234.39640-0.573702.854701.78130HepG2XRCC6
LPHN2ENSG00000117114.15293.37130714.26570-1.2837015.0833013.42240HepG2XRN2
LPHN2ENSG00000117114.15623.67400875.75360-0.489706.560505.59850HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LPHN2 is not available on ENCORE database.





11 RBPs can affect the splicing of LPHN2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELPHN2ENSG00000117114.15chr1+8245294382453025824509428245103982456074824565240.210000.002480.04332includedHepG2U2AF1
SELPHN2ENSG00000117114.15chr1+8245258482452713824509428245103982456074824581060.290000.000000.00031includedHepG2HNRNPM
SELPHN2ENSG00000117114.15chr1+8245294382453025824509428245103982456074824565240.295000.000180.04822includedHepG2ILF3
SELPHN2ENSG00000117114.15chr1+8241867082418709824176408241782682421560824217440.198000.000060.00907includedHepG2QKI
SELPHN2ENSG00000117114.15chr1+8245258482452713824509428245103982456074824581060.652000.000000.00000includedHepG2QKI
SELPHN2ENSG00000117114.15chr1+8245258482452713824509428245103982456074824581060.344000.000000.00000includedHepG2DDX3X
SELPHN2ENSG00000117114.15chr1+8245258482452713824509428245103982456074824581060.603000.000000.00000includedHepG2NCBP2
SELPHN2ENSG00000117114.15chr1+8241867082418709824176408241782682421560824217440.127000.001350.08215includedHepG2HNRNPL
SELPHN2ENSG00000117114.15chr1+8241867082418709824176408241782682421560824217440.222000.000270.08610includedHepG2XPO5
SELPHN2ENSG00000117114.15chr1+8245297282453025824509428245103982456074824563650.457000.000970.08063includedHepG2SUPV3L1
SELPHN2ENSG00000117114.15chr1+8245294382453025824509428245103982456074824565240.245000.000350.01993includedHepG2SF3B4
SELPHN2ENSG00000117114.15chr1+8245294382453025824509428245103982456074824565240.338000.000450.07830includedHepG2DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LPHN2 is not avaliable on ENCORE database.