HIST1H2BN

General Information

Gene Name       : HIST1H2BN
Gene ID             : ENSG00000233822.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST1H2BN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST1H2BNENSG00000233822.40.450.760.60ENCSR000AEF
HepG2HIST1H2BNENSG00000233822.41.060.540.80ENCSR985KAT
K562HIST1H2BNENSG00000233822.420.6214.6917.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST1H2BN is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST1H2BN RNA is bound by 21 proteins.  







eCLIP assay for HIST1H2BN is not avaliable on ENCORE database.





21 proteins are bound to HIST1H2BN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62780686527806872+3'-UTR,intron-Proximal10.57897210.25014K562SLBP
chr62780683027806844+3'-UTR,5'-UTR,intron-Proximal9.34208196.52117K562SLBP
chr62780684427806865+3'-UTR,intron-Proximal11.01096296.96902K562SLBP
chr62780687227806886+3'-UTR,intron-Proximal10.55660203.02702K562SLBP
chr62780683427806856+3'-UTR,5'-UTR,intron-Proximal4.319795.97994K562AQR
chr62780680027806830+3'-UTR,5'-UTR,CDS,intron-Proximal8.09986122.90580K562SLBP
chr62781988427819932+3'-UTR,CDS,intron-Proximal4.003464.14779K562U2AF2
chr62781983827819928+3'-UTR,CDS,intron-Proximal4.3899716.55325K562SF3B4
chr62780682027806866+3'-UTR,5'-UTR,intron-Proximal3.017556.95311HepG2GRWD1
chr62780681727806865+3'-UTR,5'-UTR,intron-Proximal3.8090018.12601K562RPS3
chr62780941827809446+5'-UTR,CDS,intron-Proximal4.7461834.65675K562PRPF8
chr62780642527806451+5'-UTR,CDS3.1739639.73504K562YBX3
chr62780943327809477+5'-UTR,CDS,intron-Proximal3.062376.86557K562NIPBL
chr62780639527806475+5'-UTR,CDS3.4276949.20227K562GEMIN5
chr62780634827806405+5'-UTR3.9286735.19068K562DDX3X
chr62780641027806459+5'-UTR,CDS3.0331417.65647K562RPS3
chr62780673227806780+CDS4.2218819.51966K562RPS3
chr62780677027806786+CDS5.0593742.24908K562SLBP
chr62780670027806769+CDS3.5654412.36591K562METAP2
chr62780670527806720+CDS3.2278215.80610K562YBX3
chr62780674227806770+CDS4.7744758.10885K562SLBP
chr62780658027806618+CDS3.7615316.99298K562RPS3
chr62780644027806539+CDS3.387264.67398HepG2TRA2A
chr62780645127806479+CDS3.2584646.36618K562YBX3
chr62780661927806673+CDS3.1967910.72557K562PUM1
chr62781583327815881+intron-Distal4.002906.87274K562HNRNPL
chr62780965827809706+intron-Distal4.008893.14791K562HNRNPL
chr62780973327809810+intron-Distal5.0983413.02909K562PTBP1
chr62781606127816239+intron-Distal3.229987.53242K562GTF2F1
chr62781233127812411+intron-Distal3.170144.20777K562KHDRBS1
chr62781604927816123+intron-Distal3.748917.94466HepG2HNRNPL
chr62781587227815933+intron-Distal7.1599178.04965K562QKI
chr62780963227809724+intron-Distal4.3709615.16976K562PTBP1
chr62781577827815872+intron-Distal5.4812683.91689K562QKI
chr62781603527816126+intron-Distal3.5966833.61354K562HNRNPL
chr62781594927816002+intron-Distal4.944228.35018K562HNRNPL
chr62781612627816174+intron-Distal3.1130212.81704K562HNRNPL
chr62781617427816248+intron-Distal3.8205511.58426K562HNRNPL
chr62781612927816170+intron-Distal3.6024217.08523K562AGGF1
chr62780944627809514+intron-Proximal5.0320244.93472K562PRPF8
chr62780945827809482+intron-Proximal3.919449.04524K562AQR
chr62780946427809537+intron-Proximal3.195863.54602K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST1H2BN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST1H2BN is not available on ENCORE database.

  • 104 RBPs can affect the levels of HIST1H2BN.  








The Knockdown/knockout RNA-Seq assay for HIST1H2BN is not available on ENCORE database.





104 RBPs can affect the gene expression of HIST1H2BN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST1H2BNENSG00000233822.3109.2890068.912700.665202.110401.42820HepG2AKAP8L
HIST1H2BNENSG00000233822.3136.4713082.784200.721102.741602.05930HepG2AUH
HIST1H2BNENSG00000233822.397.9473050.438600.957403.052002.06460HepG2BCCIP
HIST1H2BNENSG00000233822.3161.7937064.762801.320807.183006.01630HepG2CALR
HIST1H2BNENSG00000233822.3139.9181068.572101.028805.120204.26660HepG2CKAP4
HIST1H2BNENSG00000233822.3168.7142062.458901.433507.963706.84850HepG2CPSF6
HIST1H2BNENSG00000233822.3115.3633060.285500.936203.880903.14270HepG2CELF1
HIST1H2BNENSG00000233822.3119.9736064.801400.888503.952803.09180HepG2DAZAP1
HIST1H2BNENSG00000233822.3117.1036052.228401.164804.516103.67320HepG2DDX21
HIST1H2BNENSG00000233822.382.6052049.580900.736301.978501.31290HepG2DDX55
HIST1H2BNENSG00000233822.3147.6242070.926701.057403.486302.39070HepG2DDX59
HIST1H2BNENSG00000233822.369.3472033.310501.057802.426001.38970HepG2EFTUD2
HIST1H2BNENSG00000233822.3216.23650144.321700.583202.263501.68320HepG2EIF4A3
HIST1H2BNENSG00000233822.3204.3212061.255001.7378013.5572011.84710HepG2EIF4G2
HIST1H2BNENSG00000233822.3183.0867095.045700.945705.283104.49960HepG2ETF1
HIST1H2BNENSG00000233822.3131.8326067.023600.975904.056903.04650HepG2EWSR1
HIST1H2BNENSG00000233822.3127.9291062.566201.031802.413801.47130HepG2FTO
HIST1H2BNENSG00000233822.370.37760145.59030-1.048704.124103.29130HepG2FXR1
HIST1H2BNENSG00000233822.3140.0619070.801800.984103.541802.82640HepG2GPKOW
HIST1H2BNENSG00000233822.3133.4672064.691501.044703.320501.78720HepG2HLTF
HIST1H2BNENSG00000233822.3104.6733044.312301.240004.096303.33330HepG2HNRNPA1
HIST1H2BNENSG00000233822.3137.0602059.564201.202206.249104.94160HepG2HNRNPA2B1
HIST1H2BNENSG00000233822.3105.2772049.284101.094903.393402.63240HepG2HNRNPC
HIST1H2BNENSG00000233822.3139.4694059.022901.240507.062406.03100HepG2HNRNPL
HIST1H2BNENSG00000233822.3201.5816067.567501.5769010.002808.89030HepG2HNRNPLL
HIST1H2BNENSG00000233822.387.0775050.010500.800002.376201.68950HepG2ILF2
HIST1H2BNENSG00000233822.3205.2565080.349501.353007.393906.02310HepG2LARP4
HIST1H2BNENSG00000233822.3264.08580145.641000.858504.713703.86420HepG2MAGOH
HIST1H2BNENSG00000233822.392.4263045.474201.023202.992101.85060HepG2NONO
HIST1H2BNENSG00000233822.3311.80540124.903601.319706.355804.97390HepG2PABPC1
HIST1H2BNENSG00000233822.3178.66260127.095400.491202.055501.51990HepG2PCBP1
HIST1H2BNENSG00000233822.3152.8798064.019501.255705.763904.31070HepG2PCBP2
HIST1H2BNENSG00000233822.3112.0375050.830301.140104.767603.78330HepG2PRPF4
HIST1H2BNENSG00000233822.3108.0201038.305501.495606.187805.03180HepG2PRPF8
HIST1H2BNENSG00000233822.3115.6785061.345500.915003.411102.75860HepG2PUF60
HIST1H2BNENSG00000233822.3155.9453069.878001.158006.663505.77900HepG2PUS1
HIST1H2BNENSG00000233822.3168.0356079.441001.080705.536704.86740HepG2RBM22
HIST1H2BNENSG00000233822.3247.69310127.112500.962306.427305.43920HepG2RBM25
HIST1H2BNENSG00000233822.381.73350134.07520-0.714002.393401.81490HepG2RECQL
HIST1H2BNENSG00000233822.3113.4051060.663700.902502.748301.80780HepG2RPS10
HIST1H2BNENSG00000233822.363.7583031.575601.013702.173001.62130HepG2RPS19
HIST1H2BNENSG00000233822.372.1029031.677801.186503.029702.04350HepG2SERBP1
HIST1H2BNENSG00000233822.3186.93530115.997800.688302.603001.94830HepG2SF3A3
HIST1H2BNENSG00000233822.3134.8523066.878301.011703.862403.04060HepG2SF3B1
HIST1H2BNENSG00000233822.3117.5484058.834400.998404.402703.54810HepG2SLBP
HIST1H2BNENSG00000233822.3143.8221060.254401.255004.142102.19750HepG2SLTM
HIST1H2BNENSG00000233822.3272.1220074.413901.8705011.9596010.34690HepG2SNRNP70
HIST1H2BNENSG00000233822.3193.1281089.726301.105906.934106.24070HepG2SRFBP1
HIST1H2BNENSG00000233822.397.4158060.577700.685302.185501.62200HepG2SRSF5
HIST1H2BNENSG00000233822.3211.6911077.904701.4421012.0297011.10790HepG2SSB
HIST1H2BNENSG00000233822.3128.2869056.402001.185504.750803.53400HepG2SUPT6H
HIST1H2BNENSG00000233822.3137.5398049.373801.477906.580605.60610HepG2SUPV3L1
HIST1H2BNENSG00000233822.3205.5950065.858101.6423011.3893010.06900HepG2TARDBP
HIST1H2BNENSG00000233822.376.1447033.103701.201703.813302.66270HepG2TFIP11
HIST1H2BNENSG00000233822.3120.0963047.591701.335305.977505.29520HepG2TIAL1
HIST1H2BNENSG00000233822.396.9834047.996401.014703.711703.07920HepG2TRIM56
HIST1H2BNENSG00000233822.383.3922045.255500.881702.464401.52030HepG2UPF2
HIST1H2BNENSG00000233822.3185.04200105.737400.807304.242502.97810HepG2UTP18
HIST1H2BNENSG00000233822.358.6662099.31910-0.759501.961501.43930HepG2UTP3
HIST1H2BNENSG00000233822.384.0703050.167800.744701.910901.33810HepG2ZC3H8
HIST1H2BNENSG00000233822.3203.13560113.139800.844205.329204.63240HepG2ZNF622
HIST1H2BNENSG00000233822.3967.137101451.24760-0.5855010.596809.58140K562AGGF1
HIST1H2BNENSG00000233822.3645.906801078.35510-0.739409.204106.86070K562APOBEC3C
HIST1H2BNENSG00000233822.31570.30470943.826600.734409.327808.35250K562AQR
HIST1H2BNENSG00000233822.3750.30690576.336000.380503.403001.91590K562BCCIP
HIST1H2BNENSG00000233822.31194.59720674.902500.8237010.146908.42570K562BOP1
HIST1H2BNENSG00000233822.31048.60800821.796500.351502.562101.33050K562CIRBP
HIST1H2BNENSG00000233822.31426.08750965.330600.562902.661201.62540K562CNOT7
HIST1H2BNENSG00000233822.32153.341101503.025800.518606.955705.42710K562CELF1
HIST1H2BNENSG00000233822.3527.32840736.03670-0.481102.703101.67220K562DDX3X
HIST1H2BNENSG00000233822.3632.306601119.79430-0.8245014.5025013.12680K562DDX47
HIST1H2BNENSG00000233822.31251.926601624.99640-0.376304.806403.60140K562DKC1
HIST1H2BNENSG00000233822.3334.78610554.05700-0.726805.587804.61870K562EIF2S2
HIST1H2BNENSG00000233822.3236.44150397.70690-0.750202.853001.83120K562EIF3A
HIST1H2BNENSG00000233822.3369.95430501.53450-0.439002.242701.32100K562EIF3D
HIST1H2BNENSG00000233822.3330.82780574.58170-0.796409.335507.87610K562EIF3G
HIST1H2BNENSG00000233822.31209.55700768.998100.653308.003106.60580K562EIF4A3
HIST1H2BNENSG00000233822.3978.50910730.193100.422203.178502.25700K562FMR1
HIST1H2BNENSG00000233822.3697.52370507.964500.457403.806102.19830K562FUS
HIST1H2BNENSG00000233822.3382.89050799.72930-1.0626019.3878017.90200K562FXR1
HIST1H2BNENSG00000233822.31133.54400662.056200.775706.811205.59210K562G3BP2
HIST1H2BNENSG00000233822.31059.17280748.287800.501206.222304.55160K562GLRX3
HIST1H2BNENSG00000233822.3853.01030685.075100.316201.979301.30420K562GPKOW
HIST1H2BNENSG00000233822.31286.13490591.024201.1217021.9785020.37770K562HNRNPC
HIST1H2BNENSG00000233822.3812.274501012.05400-0.317202.343001.37950K562HNRNPL
HIST1H2BNENSG00000233822.3327.53550511.30360-0.642504.190603.02790K562HNRNPM
HIST1H2BNENSG00000233822.31002.88490585.053000.777403.497002.43250K562KRR1
HIST1H2BNENSG00000233822.3800.09280599.467200.416402.783301.32750K562LIN28B
HIST1H2BNENSG00000233822.31412.878901795.31040-0.345603.423702.39300K562MBNL1
HIST1H2BNENSG00000233822.3910.82710668.723300.445703.632302.62190K562METAP2
HIST1H2BNENSG00000233822.32002.805301302.638600.620507.308805.51530K562MSI2
HIST1H2BNENSG00000233822.31000.50900786.730900.346703.675202.75330K562MTPAP
HIST1H2BNENSG00000233822.31151.59490874.107100.397706.001204.96170K562NSUN2
HIST1H2BNENSG00000233822.3593.89820787.72990-0.407503.398601.89870K562PCBP1
HIST1H2BNENSG00000233822.31371.75730992.222100.467203.628402.67510K562PCBP3
HIST1H2BNENSG00000233822.3950.17660761.060900.320102.369801.62960K562POLR2G
HIST1H2BNENSG00000233822.3288.27260455.83760-0.661104.353603.41370K562PRPF8
HIST1H2BNENSG00000233822.3694.74870529.919600.390602.464101.61670K562PSIP1
HIST1H2BNENSG00000233822.3571.97980782.93350-0.452904.094003.30240K562PTBP1
HIST1H2BNENSG00000233822.31122.644101418.57940-0.337503.626902.39590K562PUM1
HIST1H2BNENSG00000233822.3997.420601497.63260-0.586406.141005.37080K562PUS1
HIST1H2BNENSG00000233822.3572.60040750.72030-0.390702.747001.91020K562RBM22
HIST1H2BNENSG00000233822.3624.20760483.504500.368402.493201.55630K562RCC2
HIST1H2BNENSG00000233822.3339.17800464.31240-0.453102.242701.51150K562RPS19
HIST1H2BNENSG00000233822.3648.514101056.86690-0.704607.058905.36600K562RPS3
HIST1H2BNENSG00000233822.3502.69320678.14670-0.431903.137301.98290K562SAFB
HIST1H2BNENSG00000233822.31164.00290862.552700.432305.234404.13880K562SF3A3
HIST1H2BNENSG00000233822.31045.74840768.024800.445205.145503.53070K562SRSF7
HIST1H2BNENSG00000233822.31159.23730745.924900.636006.223604.27010K562STAU1
HIST1H2BNENSG00000233822.31685.278301163.398300.534507.049304.82820K562SUCLG1
HIST1H2BNENSG00000233822.3731.92930441.332300.729706.194604.63180K562SUPV3L1
HIST1H2BNENSG00000233822.3373.64400763.37400-1.0307015.9305013.99040K562SYNCRIP
HIST1H2BNENSG00000233822.3604.14880776.79180-0.362602.333001.68080K562TARDBP
HIST1H2BNENSG00000233822.3662.94360509.691400.379202.151901.33670K562TIAL1
HIST1H2BNENSG00000233822.3847.65080541.505200.646406.393404.82000K562TRIM56
HIST1H2BNENSG00000233822.31012.71420727.058900.478003.951702.21110K562TRIP6
HIST1H2BNENSG00000233822.31069.20260848.989400.332603.107501.75960K562TROVE2
HIST1H2BNENSG00000233822.3763.97130467.104400.709704.691803.32760K562UCHL5
HIST1H2BNENSG00000233822.31089.66080926.836000.233402.132801.49560K562UPF1
HIST1H2BNENSG00000233822.31206.02700793.061500.604707.683006.18320K562WDR3
HIST1H2BNENSG00000233822.31646.270201118.598700.557407.365005.28140K562WRN
HIST1H2BNENSG00000233822.31603.574401063.085700.592907.640506.08660K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST1H2BN is not available on ENCORE database.





7 RBPs can affect the splicing of HIST1H2BN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHIST1H2BNENSG00000233822.3chr6+2781319527813310278093412780943927819886278234870.102000.000230.07267includedK562IGF2BP2
SEHIST1H2BNENSG00000233822.3chr6+278130042781313527809341278094392781988627823487-0.119000.001280.02750excludedK562U2AF1
SEHIST1H2BNENSG00000233822.3chr6+2781300427813135278093412780943927819886278234870.199000.000230.02154includedK562HNRNPL
SEHIST1H2BNENSG00000233822.3chr6+2781300427813135278093412780943927819886278234870.164000.000410.01895includedK562HNRNPU
SEHIST1H2BNENSG00000233822.3chr6+2781300427813135278093412780943927819886278234870.275000.000620.06323includedK562CPSF6
SEHIST1H2BNENSG00000233822.3chr6+278130042781313527809341278094392781988627823487-0.111000.000340.01738excludedK562PTBP1
MXEHIST1H2BNENSG00000233822.3chr6+2781300427813135278131952781331027809341278094392781988627823487-0.756000.004660.060902includedK562U2AF1
MXEHIST1H2BNENSG00000233822.3chr6+2781300427813135278131952781331027809341278094392781988627823487-0.681000.005090.055922includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HIST1H2BN is not avaliable on ENCORE database.