ABCC5

General Information

Gene Name       : ABCC5
Gene ID             : ENSG00000114770.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ABCC5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ABCC5ENSG00000114770.164.906.545.72ENCSR000AEF
HepG2ABCC5ENSG00000114770.169.9712.2611.12ENCSR985KAT
K562ABCC5ENSG00000114770.1627.7729.6228.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ABCC5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ABCC5 RNA is bound by 20 proteins.  







eCLIP assay for ABCC5 is not avaliable on ENCORE database.





20 proteins are bound to ABCC5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3183679238183679345-3'-UTR,CDS,intron-Distal,intron-Proximal3.324933.54718K562PRPF8
chr3183702764183702804-3'-UTR,intron-Distal3.552156.17334HepG2U2AF2
chr3183667557183667674-3'-UTR,CDS,intron-Distal,intron-Proximal5.531734.75872K562DDX24
chr3183707107183707174-3'-UTR,CDS,intron-Distal,intron-Proximal3.824265.52342HepG2PPIG
chr3183682976183683037-3'-UTR,CDS,intron-Distal3.214553.43213K562UCHL5
chr3183705299183705347-3'-UTR,intron-Distal3.764314.74268K562UCHL5
chr3183706350183706460-3'-UTR,CDS,intron-Distal,intron-Proximal4.228486.28735K562DDX24
chr3183706358183706434-3'-UTR,CDS,intron-Distal,intron-Proximal3.142984.51003HepG2PPIG
chr3183702822183702955-3'-UTR,intron-Distal3.2188912.60156K562KHSRP
chr3183704547183704590-3'-UTR,intron-Distal3.527266.24191K562KHSRP
chr3183637776183637886-3'-UTR,intron-Distal3.927103.46958K562YBX3
chr3183704590183704614-3'-UTR,intron-Distal4.021497.12499K562KHSRP
chr3183705491183705562-3'-UTR,CDS,intron-Distal,intron-Proximal3.649866.06472K562AQR
chr3183704575183704664-3'-UTR,intron-Distal4.5951411.54819K562QKI
chr3183704674183704705-3'-UTR,intron-Distal3.157534.79074K562KHSRP
chr3183704705183704727-3'-UTR,intron-Distal3.488774.76004K562KHSRP
chr3183670946183671042-3'-UTR,CDS,intron-Distal3.352103.17151K562UCHL5
chr3183702983183703073-3'-UTR,intron-Distal,intron-Proximal4.001343.97489K562TIA1
chr3183705490183705678-3'-UTR,CDS,intron-Distal,intron-Proximal3.627824.24070HepG2GRWD1
chr3183705444183705541-3'-UTR,CDS,intron-Distal,intron-Proximal3.230563.76069K562U2AF1
chr3183638722183638775-3'-UTR,intron-Distal5.053287.56405K562PUM2
chr3183705168183705271-3'-UTR,intron-Distal5.8681312.04872K562HNRNPM
chr3183702804183702861-3'-UTR,intron-Distal3.381284.30158HepG2U2AF2
chr3183702551183702673-3'-UTR,CDS,intron-Distal4.204863.15006K562RBM15
chr3183704990183705053-3'-UTR,intron-Distal4.659709.97943K562HNRNPM
chr3183689585183689631-5'-UTR,CDS,intron-Distal,intron-Proximal4.013063.01428K562UCHL5
chr3183732175183732233-5'-UTR,CDS,intron-Distal,intron-Proximal3.392076.97987K562ZNF622
chr3183735619183735687-5'-UTR,intron-Distal,intron-Proximal3.859857.05173K562ZNF622
chr3183700758183700843-CDS,intron-Distal,intron-Proximal3.978205.02403K562SF3B4
chr3183732051183732156-CDS,intron-Distal,intron-Proximal3.558763.95463K562ZNF800
chr3183705485183705537-CDS,intron-Distal,intron-Proximal3.010894.92970K562TIA1
chr3183695241183695328-CDS,intron-Distal,intron-Proximal4.926423.37645HepG2PRPF8
chr3183700353183700393-CDS,intron-Distal3.345843.31745K562ZNF622
chr3183701093183701197-intron-Distal4.960868.57350K562KHSRP
chr3183701318183701378-intron-Distal,intron-Proximal4.7145512.48792HepG2TIA1
chr3183660359183660444-intron-Distal,intron-Proximal4.015953.02181K562PRPF8
chr3183673432183673534-intron-Distal4.864083.80269HepG2DROSHA
chr3183701032183701093-intron-Distal3.249744.13575K562KHSRP
chr3183701450183701517-intron-Distal,intron-Proximal3.331513.29355K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ABCC5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ABCC5 is not available on ENCORE database.

  • 114 RBPs can affect the levels of ABCC5.  








The Knockdown/knockout RNA-Seq assay for ABCC5 is not available on ENCORE database.





114 RBPs can affect the gene expression of ABCC5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ABCC5ENSG00000114770.12891.58120562.072600.665506.945905.33170HepG2AATF
ABCC5ENSG00000114770.121078.31850807.719300.416802.922401.95290HepG2ABCF1
ABCC5ENSG00000114770.121110.58530710.342600.6446012.2189011.13360HepG2ACO1
ABCC5ENSG00000114770.12823.84360644.882200.353202.212201.31970HepG2ADAR
ABCC5ENSG00000114770.121834.65400721.253801.3468021.8258020.48520HepG2AKAP1
ABCC5ENSG00000114770.121275.03710713.722800.8370012.4461010.97640HepG2AKAP8L
ABCC5ENSG00000114770.12962.24040596.789600.689106.589405.40230HepG2ASCC1
ABCC5ENSG00000114770.121538.192401168.332000.396705.478704.56900HepG2AUH
ABCC5ENSG00000114770.121222.61830818.345700.579106.320305.45710HepG2BOP1
ABCC5ENSG00000114770.121295.51160890.202400.541203.731802.58640HepG2CCAR1
ABCC5ENSG00000114770.121004.51200566.987100.825009.369308.01840HepG2CIRBP
ABCC5ENSG00000114770.121242.12290710.239800.8063020.4833019.04230HepG2CKAP4
ABCC5ENSG00000114770.121145.31020459.774901.316604.246803.29320HepG2CNOT7
ABCC5ENSG00000114770.121516.68120924.878000.7135015.0642013.80020HepG2CELF1
ABCC5ENSG00000114770.12829.02770656.988800.335503.584002.64970HepG2DDX19B
ABCC5ENSG00000114770.121812.46620690.933801.3912026.7648025.03190HepG2DDX3X
ABCC5ENSG00000114770.121227.27340786.254600.642305.207604.18790HepG2DDX55
ABCC5ENSG00000114770.121252.18930853.158500.553502.746701.77190HepG2DDX59
ABCC5ENSG00000114770.12645.37740490.954600.394502.377901.35210HepG2EFTUD2
ABCC5ENSG00000114770.12765.14540478.066600.678406.153604.84390HepG2EIF3D
ABCC5ENSG00000114770.121163.34390630.581500.883409.672008.48980HepG2EIF4A3
ABCC5ENSG00000114770.121438.83910613.900701.2287014.6046013.09740HepG2EIF4B
ABCC5ENSG00000114770.122265.756701341.449000.7561020.8871019.49770HepG2ETF1
ABCC5ENSG00000114770.121235.37820694.177400.8315013.2419011.47710HepG2EWSR1
ABCC5ENSG00000114770.121763.12110815.632901.1120016.3705014.76100HepG2FIP1L1
ABCC5ENSG00000114770.121241.10260752.549500.721702.927301.88150HepG2FTO
ABCC5ENSG00000114770.121145.27670759.289800.592903.899002.58040HepG2FUS
ABCC5ENSG00000114770.12904.36930636.136900.507503.829703.02590HepG2FXR1
ABCC5ENSG00000114770.121182.54020590.159401.0026012.3887011.03520HepG2G3BP1
ABCC5ENSG00000114770.12623.42810425.659900.550403.710902.65990HepG2GEMIN5
ABCC5ENSG00000114770.12957.91110686.109100.481403.278302.16430HepG2GNB2L1
ABCC5ENSG00000114770.12696.87580425.494300.711702.891101.75360HepG2GRSF1
ABCC5ENSG00000114770.12476.58380655.61160-0.460103.164502.48010HepG2HNRNPA1
ABCC5ENSG00000114770.121139.38640913.920800.318003.390702.37030HepG2HNRNPA2B1
ABCC5ENSG00000114770.121068.09700729.227100.550505.255404.32360HepG2HNRNPC
ABCC5ENSG00000114770.12781.07650977.85250-0.324203.183802.41830HepG2HNRNPF
ABCC5ENSG00000114770.12904.08700597.475200.597505.411004.45830HepG2HNRNPK
ABCC5ENSG00000114770.12582.84400812.81440-0.479803.348202.66250HepG2HNRNPLL
ABCC5ENSG00000114770.12859.79010724.407400.247102.004701.47850HepG2HNRNPU
ABCC5ENSG00000114770.121049.56450606.576000.790906.800404.91130HepG2HSPD1
ABCC5ENSG00000114770.12777.46630962.90620-0.308602.392301.71690HepG2IGF2BP1
ABCC5ENSG00000114770.121279.73270599.901601.0929013.2897011.93430HepG2IGF2BP2
ABCC5ENSG00000114770.121335.65000562.911401.246506.978905.45800HepG2IGF2BP3
ABCC5ENSG00000114770.12919.38270739.961500.313103.428302.61830HepG2ILF2
ABCC5ENSG00000114770.12899.03060606.226900.568402.563801.36980HepG2KRR1
ABCC5ENSG00000114770.121428.52640940.454000.603004.667403.58040HepG2LARP4
ABCC5ENSG00000114770.12865.93600636.358600.444302.971802.29340HepG2MAGOH
ABCC5ENSG00000114770.121215.99200639.935400.9260010.479609.31210HepG2MATR3
ABCC5ENSG00000114770.12840.35730500.347800.748004.511303.18760HepG2METAP2
ABCC5ENSG00000114770.12972.90550660.253000.559206.002904.85370HepG2MSI2
ABCC5ENSG00000114770.121439.24040655.021801.1356016.9624015.47970HepG2NCBP2
ABCC5ENSG00000114770.12864.58900574.891900.588603.555201.92370HepG2NKRF
ABCC5ENSG00000114770.121135.23470722.044400.652703.190302.01250HepG2NONO
ABCC5ENSG00000114770.12757.27010583.396400.376202.203701.55400HepG2PABPC4
ABCC5ENSG00000114770.12963.48030717.063700.426104.934403.84400HepG2PARN
ABCC5ENSG00000114770.121056.19250569.800800.8902018.8682017.51480HepG2PCBP1
ABCC5ENSG00000114770.12480.93330646.11690-0.426003.732602.88810HepG2PPIL4
ABCC5ENSG00000114770.121126.48360755.575800.576103.418402.07320HepG2PRPF6
ABCC5ENSG00000114770.121042.73590579.789600.8467016.6943015.56850HepG2PTBP1
ABCC5ENSG00000114770.121819.58140999.246800.8646031.9648030.40040HepG2PUM1
ABCC5ENSG00000114770.121484.84990998.504700.572408.332707.19590HepG2PUM2
ABCC5ENSG00000114770.121269.85580723.537500.8114019.6929018.31800HepG2PUS1
ABCC5ENSG00000114770.122206.253201121.193200.9765028.7735027.45400HepG2RBM22
ABCC5ENSG00000114770.12903.65540569.888200.665007.644106.57140HepG2RBM25
ABCC5ENSG00000114770.121058.19200645.253500.7136011.6256010.66400HepG2NELFE
ABCC5ENSG00000114770.12957.40050600.959800.6718010.345209.26890HepG2RECQL
ABCC5ENSG00000114770.12766.78860465.170800.721008.062807.07750HepG2RPS19
ABCC5ENSG00000114770.12783.81660461.048900.765503.698102.77320HepG2RPS3A
ABCC5ENSG00000114770.121078.48810599.919300.846108.469707.19300HepG2RRP9
ABCC5ENSG00000114770.12535.32380645.12830-0.269201.999901.43770HepG2SAFB2
ABCC5ENSG00000114770.121021.28380804.561200.344002.435501.77200HepG2SF3B1
ABCC5ENSG00000114770.12798.05220603.643100.402703.805403.12960HepG2SF3B4
ABCC5ENSG00000114770.12657.80590902.59630-0.456405.761104.81010HepG2SLBP
ABCC5ENSG00000114770.121293.25930895.202600.530603.087702.26160HepG2SNRNP70
ABCC5ENSG00000114770.121776.902901266.328900.488609.109708.34490HepG2SRFBP1
ABCC5ENSG00000114770.121531.82940630.069701.2816043.1718041.79420HepG2SRSF1
ABCC5ENSG00000114770.121426.61790929.416100.618106.210305.32580HepG2SRSF5
ABCC5ENSG00000114770.12799.11890512.592700.640509.469008.55490HepG2SRSF9
ABCC5ENSG00000114770.12889.884301099.44270-0.305103.286802.73930HepG2SSB
ABCC5ENSG00000114770.121379.867601056.982100.384505.884005.03890HepG2SUCLG1
ABCC5ENSG00000114770.121230.19410782.686600.652305.509804.60740HepG2SUPV3L1
ABCC5ENSG00000114770.121041.74930566.323000.8792016.2277015.03650HepG2TAF15
ABCC5ENSG00000114770.12993.01940593.901100.741503.301502.13860HepG2TBRG4
ABCC5ENSG00000114770.12741.25470524.596600.498702.838801.82960HepG2TFIP11
ABCC5ENSG00000114770.12989.36010703.970500.490905.400504.74910HepG2TIAL1
ABCC5ENSG00000114770.121357.24130697.796700.9597014.3294012.86340HepG2U2AF1
ABCC5ENSG00000114770.121334.19770749.558200.831802.294901.40760HepG2U2AF2
ABCC5ENSG00000114770.12732.30870462.345000.663405.689104.59120HepG2UCHL5
ABCC5ENSG00000114770.121044.12200761.378100.455506.347405.36110HepG2UPF1
ABCC5ENSG00000114770.121028.59800782.609700.394203.013901.92630HepG2UTP18
ABCC5ENSG00000114770.121535.08150735.084601.0622033.2203031.49710HepG2UTP3
ABCC5ENSG00000114770.12532.36770770.46970-0.533303.888703.03780HepG2XRN2
ABCC5ENSG00000114770.12992.06300629.309800.6566011.8180010.59110HepG2ZC3H8
ABCC5ENSG00000114770.123711.814303161.053000.231603.076602.48290K562AGGF1
ABCC5ENSG00000114770.124722.905003860.514800.290802.758001.52000K562APOBEC3C
ABCC5ENSG00000114770.122583.427903848.79090-0.575108.196507.27460K562AQR
ABCC5ENSG00000114770.122818.557503451.02350-0.292103.922302.81690K562ATP5C1
ABCC5ENSG00000114770.122024.573002484.54050-0.295404.377303.15220K562BCLAF1
ABCC5ENSG00000114770.126949.494305379.316800.369405.762204.35470K562CELF1
ABCC5ENSG00000114770.123824.947803058.938900.322305.487904.61570K562DDX47
ABCC5ENSG00000114770.123022.856703539.71600-0.227702.801601.92170K562DKC1
ABCC5ENSG00000114770.121000.243401325.81750-0.406503.532801.99980K562DNAJC21
ABCC5ENSG00000114770.121855.673903159.45880-0.7677010.646009.37490K562EIF2S2
ABCC5ENSG00000114770.124998.931404375.079400.192202.390201.51360K562EIF4G2
ABCC5ENSG00000114770.121978.382401590.696600.314603.725202.13110K562FUS
ABCC5ENSG00000114770.122277.085501747.601100.381705.766404.93960K562FXR1
ABCC5ENSG00000114770.121166.381701808.32190-0.632608.654707.24400K562GPKOW
ABCC5ENSG00000114770.123101.604504210.68990-0.441003.614202.75440K562GRSF1
ABCC5ENSG00000114770.123129.838902357.040600.409005.212403.75310K562HNRNPA1
ABCC5ENSG00000114770.122594.958602055.149600.336402.581901.39290K562HNRNPK
ABCC5ENSG00000114770.123473.958702764.284500.329603.485502.28170K562HNRNPL
ABCC5ENSG00000114770.122190.138803408.26080-0.638009.510408.05950K562HSPD1
ABCC5ENSG00000114770.122802.576502158.245500.376804.304903.13230K562MATR3
ABCC5ENSG00000114770.122931.256203910.56860-0.415905.876104.46070K562MBNL1
ABCC5ENSG00000114770.121409.059401765.13890-0.325002.833701.94510K562METAP2
ABCC5ENSG00000114770.122824.196202248.960900.328505.685404.55290K562MTPAP
ABCC5ENSG00000114770.121516.472802068.26550-0.447703.812802.23410K562NONO
ABCC5ENSG00000114770.122089.623202853.58600-0.449504.860403.72670K562PPIG
ABCC5ENSG00000114770.121456.235902042.81550-0.488304.879903.88620K562PRPF8
ABCC5ENSG00000114770.123819.948004773.56420-0.321503.020902.16820K562PUF60
ABCC5ENSG00000114770.124324.724504974.88700-0.202102.217601.35630K562PUM2
ABCC5ENSG00000114770.124273.244503262.336000.389303.733603.11640K562PUS1
ABCC5ENSG00000114770.121490.324502014.57910-0.434904.448003.35090K562RBM22
ABCC5ENSG00000114770.121323.005601719.90670-0.378502.612501.66800K562SF3B1
ABCC5ENSG00000114770.121491.298201771.54010-0.248402.151901.39860K562SF3B4
ABCC5ENSG00000114770.123506.507602335.881000.586002.464401.33300K562SNRNP200
ABCC5ENSG00000114770.123258.690002526.148500.367308.479206.93680K562SRPK2
ABCC5ENSG00000114770.123039.102202059.967000.560909.270607.98770K562SRSF1
ABCC5ENSG00000114770.122743.815203352.38630-0.289004.344402.75130K562TROVE2
ABCC5ENSG00000114770.122741.756701651.361400.731308.749206.62490K562U2AF1
ABCC5ENSG00000114770.121618.754402093.40440-0.371002.959601.89850K562UCHL5
ABCC5ENSG00000114770.123197.705802357.537100.4397011.101209.54070K562WDR43
ABCC5ENSG00000114770.121614.678202131.59350-0.400703.363601.98800K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ABCC5 is not available on ENCORE database.





7 RBPs can affect the splicing of ABCC5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEABCC5ENSG00000114770.12chr3-183703091183703166183701540183702682183705557183705705-0.426000.001820.09788excludedK562HNRNPL
SEABCC5ENSG00000114770.12chr3-183703086183703166183700561183700795183705557183705705-0.350000.000350.03155excludedK562HNRNPUL1
SEABCC5ENSG00000114770.12chr3-183703091183703166183701540183702682183705557183705705-0.433000.004540.08477excludedK562RBM15
SEABCC5ENSG00000114770.12chr3-1837276761837277651837070131837071711837320511837322350.230000.000000.00000includedK562HNRNPC
A3SSABCC5ENSG00000114770.12chr3-1836651111836653351836651111836652981836675401836676690.076000.014660.07335longerK562AQR
A3SSABCC5ENSG00000114770.12chr3-1837063591837065431837063591837065151837070131837071710.082000.000000.00000longerK562AQR
A3SSABCC5ENSG00000114770.12chr3-1836451171836452461836451171836452311836465341836466130.069000.006830.03799longerK562AQR
A3SSABCC5ENSG00000114770.12chr3-1837030911837032431837030911837031661837055571837057050.198000.000480.02658longerK562PUS1
A3SSABCC5ENSG00000114770.12chr3-183670873183671058183670873183670929183677520183677623-0.114000.001880.07830shorterK562PUS1
RIABCC5ENSG00000114770.12chr3-183701540183705705183701540183702682183705557183705705-0.317000.000050.00916excludedK562NONO
RIABCC5ENSG00000114770.12chr3-183701540183705705183701540183702682183705557183705705-0.207000.000440.05520excludedK562HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ABCC5 is not avaliable on ENCORE database.