ABCB1

General Information

Gene Name       : ABCB1
Gene ID             : ENSG00000085563.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ABCB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ABCB1ENSG00000085563.141.311.111.21ENCSR000AEF
HepG2ABCB1ENSG00000085563.1420.9419.4620.20ENCSR985KAT
K562ABCB1ENSG00000085563.140.370.350.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ABCB1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ABCB1 RNA is bound by 4 proteins.  







eCLIP assay for ABCB1 is not avaliable on ENCORE database.





4 proteins are bound to ABCB1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr78714465287144703-CDS,intron-Distal4.5888810.65228HepG2SND1
chr78714454687144606-CDS,intron-Distal,intron-Proximal5.6304716.14425HepG2SND1
chr78719541587195471-CDS,intron-Distal3.337623.27569HepG2BCLAF1
chr78719610287196166-CDS,intron-Distal3.941425.82787HepG2SND1
chr78717868787178773-CDS,intron-Distal4.7760312.50669HepG2SND1
chr78717953587179610-CDS,intron-Distal,intron-Proximal3.715666.39464HepG2BCLAF1
chr78713869387138763-CDS,intron-Distal4.6279513.28274HepG2SND1
chr78718006687180123-CDS,intron-Distal4.952185.24633HepG2SND1
chr78714460687144652-CDS,intron-Distal6.6602618.64159HepG2SND1
chr78714592187145963-CDS,intron-Distal4.197755.23222HepG2SND1
chr78714582687145851-CDS,intron-Distal3.159703.03966HepG2SND1
chr78717877387178824-CDS,intron-Distal3.876186.16691HepG2SND1
chr78718309587183149-CDS,intron-Distal4.505287.48518HepG2SND1
chr78717948687179510-CDS,intron-Distal,intron-Proximal4.487384.65414HepG2SND1
chr78719623987196276-CDS,intron-Distal3.427735.56131HepG2SND1
chr78717994687180036-intron-Distal,intron-Proximal4.183713.56873HepG2PRPF8
chr78716006187160141-intron-Distal4.833347.13376HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ABCB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ABCB1 is not available on ENCORE database.

  • 131 RBPs can affect the levels of ABCB1.  








The Knockdown/knockout RNA-Seq assay for ABCB1 is not available on ENCORE database.





131 RBPs can affect the gene expression of ABCB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ABCB1ENSG00000085563.102796.039601789.789500.643507.205105.58510HepG2AKAP8
ABCB1ENSG00000085563.102026.008601301.111500.6388015.1397013.55090HepG2AKAP8L
ABCB1ENSG00000085563.102892.761301617.346900.8387012.5908011.01970HepG2ASCC1
ABCB1ENSG00000085563.101905.008301386.581400.458205.098003.25130HepG2ATP5C1
ABCB1ENSG00000085563.102398.638701019.875701.2337023.8778021.67890HepG2BCLAF1
ABCB1ENSG00000085563.102688.376301405.826000.9352018.6501017.30230HepG2BOP1
ABCB1ENSG00000085563.102332.957801151.130301.0190023.1208020.05910HepG2BUD13
ABCB1ENSG00000085563.102540.740401061.712201.2588017.0583015.44340HepG2CALR
ABCB1ENSG00000085563.103072.129901536.595200.9994018.2768016.50290HepG2CIRBP
ABCB1ENSG00000085563.102298.110301461.351900.653004.393503.42570HepG2CNOT7
ABCB1ENSG00000085563.101969.806401290.616700.609907.339506.26190HepG2CPSF6
ABCB1ENSG00000085563.102216.750601265.313600.8089015.3327012.98070HepG2CPSF7
ABCB1ENSG00000085563.101485.443401132.854600.390804.752703.42160HepG2YBX3
ABCB1ENSG00000085563.102832.500701315.501501.1064026.6706025.09610HepG2CELF1
ABCB1ENSG00000085563.101771.219801414.438300.324405.237704.26350HepG2DAZAP1
ABCB1ENSG00000085563.101360.196601134.436600.261702.398001.32220HepG2DDX1
ABCB1ENSG00000085563.102198.262501136.257400.9520018.5606016.99730HepG2DDX21
ABCB1ENSG00000085563.101615.593501111.379900.539606.926605.49140HepG2DDX24
ABCB1ENSG00000085563.103768.726701872.437801.0091017.6691016.23180HepG2DDX3X
ABCB1ENSG00000085563.101958.711501511.271700.374003.439301.99430HepG2DDX47
ABCB1ENSG00000085563.101293.09590856.842900.593607.564305.50640HepG2DDX52
ABCB1ENSG00000085563.101418.593601153.792300.298002.072601.39330HepG2DDX55
ABCB1ENSG00000085563.103990.856401465.592801.4451016.2982014.11180HepG2DDX59
ABCB1ENSG00000085563.102475.973201246.039100.9905018.5724016.30790HepG2DDX5
ABCB1ENSG00000085563.101597.032601072.889300.573807.031305.52890HepG2DHX30
ABCB1ENSG00000085563.101539.408801238.965600.313103.768703.00150HepG2DKC1
ABCB1ENSG00000085563.101664.162701112.380300.5810010.388309.09550HepG2DNAJC21
ABCB1ENSG00000085563.10759.716201102.55480-0.537309.855808.71410HepG2DNAJC2
ABCB1ENSG00000085563.101534.124701022.315300.585505.990804.67980HepG2EEF2
ABCB1ENSG00000085563.101296.97360852.249100.605706.224604.55860HepG2EFTUD2
ABCB1ENSG00000085563.101762.825701045.874800.753107.206505.45780HepG2AGO1
ABCB1ENSG00000085563.101621.743901165.503900.476505.822304.17090HepG2EIF2S2
ABCB1ENSG00000085563.101179.82600829.890100.507504.174203.07980HepG2EIF3D
ABCB1ENSG00000085563.101387.916101072.654500.371603.495802.29850HepG2EIF3G
ABCB1ENSG00000085563.102583.344901708.758100.596205.647804.73370HepG2EIF4A3
ABCB1ENSG00000085563.103316.854701663.777600.9953011.7872010.41580HepG2EIF4B
ABCB1ENSG00000085563.101948.656201395.472200.481608.964407.62090HepG2EIF4G1
ABCB1ENSG00000085563.101838.325101336.765500.459504.580403.54980HepG2EIF4G2
ABCB1ENSG00000085563.102226.934601938.788300.199802.276701.72270HepG2ETF1
ABCB1ENSG00000085563.101976.874601265.476500.643407.713006.32620HepG2EWSR1
ABCB1ENSG00000085563.101298.26580960.445800.434703.569302.13480HepG2FKBP4
ABCB1ENSG00000085563.102015.995101292.845800.640802.511101.54560HepG2FTO
ABCB1ENSG00000085563.101817.643801031.526200.8172014.0642012.35000HepG2FUBP3
ABCB1ENSG00000085563.101330.424301724.16320-0.374002.792402.09720HepG2FXR1
ABCB1ENSG00000085563.102452.732201599.362700.616806.478205.48420HepG2G3BP1
ABCB1ENSG00000085563.101612.157801080.757200.576905.835404.34040HepG2GNB2L1
ABCB1ENSG00000085563.102402.248101462.992400.715407.922306.87540HepG2GPKOW
ABCB1ENSG00000085563.101579.502501236.371700.353304.981903.71050HepG2HDGF
ABCB1ENSG00000085563.102479.085301310.691000.919407.280304.94540HepG2HLTF
ABCB1ENSG00000085563.10776.169901123.03710-0.533005.492404.62500HepG2HNRNPA1
ABCB1ENSG00000085563.101632.929701299.932800.328904.246603.13030HepG2HNRNPA2B1
ABCB1ENSG00000085563.101774.333301249.170300.506205.609504.64940HepG2HNRNPC
ABCB1ENSG00000085563.103045.068101396.162601.1249023.2477021.70870HepG2HNRNPLL
ABCB1ENSG00000085563.101489.623701240.911600.263403.011202.38090HepG2HNRNPU
ABCB1ENSG00000085563.102946.172701949.417500.595705.408603.71560HepG2HSPD1
ABCB1ENSG00000085563.104472.578601625.698901.4599037.8640035.69690HepG2IGF2BP2
ABCB1ENSG00000085563.101961.205501424.549000.461102.749801.43750HepG2ILF3
ABCB1ENSG00000085563.101026.709401391.85730-0.439002.817501.61330HepG2KHDRBS1
ABCB1ENSG00000085563.101827.677401183.811000.6265017.3382015.06780HepG2KIF1C
ABCB1ENSG00000085563.103079.696501734.403000.8282010.749709.56560HepG2MATR3
ABCB1ENSG00000085563.102040.678801255.666300.7005011.5736010.03740HepG2MSI2
ABCB1ENSG00000085563.102089.734101423.953000.553303.485902.39150HepG2MTPAP
ABCB1ENSG00000085563.101430.993301054.343200.440604.597603.03310HepG2NAA15
ABCB1ENSG00000085563.102476.458501775.244900.480204.290103.50710HepG2NCBP2
ABCB1ENSG00000085563.101660.349101059.126400.648503.978502.64910HepG2NONO
ABCB1ENSG00000085563.101693.413601237.981300.451804.290203.36360HepG2NSUN2
ABCB1ENSG00000085563.102387.657801335.486400.838106.107804.75380HepG2PABPC1
ABCB1ENSG00000085563.102562.102001580.911900.696508.437007.19070HepG2PABPC4
ABCB1ENSG00000085563.10934.804101228.29110-0.393905.010203.91500HepG2PARN
ABCB1ENSG00000085563.102262.436401554.621500.541209.359708.35080HepG2PCBP1
ABCB1ENSG00000085563.101415.614701018.701900.474607.558506.35820HepG2PRPF4
ABCB1ENSG00000085563.102035.418801361.685100.579803.759602.34950HepG2PRPF6
ABCB1ENSG00000085563.101764.05250890.439800.9862015.9820014.26230HepG2PRPF8
ABCB1ENSG00000085563.102332.190401581.917300.5599012.3506011.35840HepG2PTBP1
ABCB1ENSG00000085563.102152.753401338.876600.6851011.078009.99340HepG2PUF60
ABCB1ENSG00000085563.102605.660101421.292400.8743039.9962038.28370HepG2PUM1
ABCB1ENSG00000085563.102039.292001420.244400.521807.945806.83520HepG2PUM2
ABCB1ENSG00000085563.103093.619601319.037201.2297046.1620044.27510HepG2PUS1
ABCB1ENSG00000085563.102793.748901713.187600.705409.341008.29170HepG2QKI
ABCB1ENSG00000085563.102881.242001250.108201.2045011.7604010.38300HepG2RAVER1
ABCB1ENSG00000085563.102180.056901631.361200.418205.515304.35480HepG2RBM15
ABCB1ENSG00000085563.102372.648001620.482900.5500010.669609.79780HepG2RBM22
ABCB1ENSG00000085563.102910.764901554.853500.9045020.8726019.12930HepG2RBM25
ABCB1ENSG00000085563.10938.884601276.75330-0.443503.602802.46290HepG2RBM27
ABCB1ENSG00000085563.101063.035101639.71040-0.6253012.8063011.62580HepG2RECQL
ABCB1ENSG00000085563.103348.458501756.582700.930608.373607.28520HepG2RPLP0
ABCB1ENSG00000085563.102062.27970880.866901.2271021.5554019.75160HepG2RRP9
ABCB1ENSG00000085563.102149.554201105.087200.9598037.6161035.66810HepG2SAFB2
ABCB1ENSG00000085563.103087.973101798.368200.779907.376206.23670HepG2SF3A3
ABCB1ENSG00000085563.103000.452901381.912401.1184025.7794023.88440HepG2SF3B1
ABCB1ENSG00000085563.102115.547401646.923000.361205.609604.81780HepG2SF3B4
ABCB1ENSG00000085563.101580.841901283.806300.300204.353003.50190HepG2SLBP
ABCB1ENSG00000085563.102470.559001219.418301.018505.691003.50780HepG2SLTM
ABCB1ENSG00000085563.101540.874701288.719300.257703.430902.72740HepG2SMN1
ABCB1ENSG00000085563.10875.472901215.77520-0.473702.963101.32150HepG2SND1
ABCB1ENSG00000085563.104288.065601537.624401.479509.307107.88120HepG2SNRNP70
ABCB1ENSG00000085563.104870.331901830.301601.41180105.00250103.04160HepG2SRFBP1
ABCB1ENSG00000085563.102658.240301486.978900.838009.536807.58910HepG2SRSF3
ABCB1ENSG00000085563.102136.322501321.964500.6923018.2851016.87340HepG2SRSF5
ABCB1ENSG00000085563.102320.278301602.078900.5343011.9197010.64960HepG2SRSF7
ABCB1ENSG00000085563.102108.419901398.562400.5921014.9724013.87220HepG2SRSF9
ABCB1ENSG00000085563.101812.334001275.788800.506403.607602.33610HepG2STIP1
ABCB1ENSG00000085563.102247.934101168.213600.944209.081906.98380HepG2SUB1
ABCB1ENSG00000085563.102382.649101503.421700.6642020.8339019.37950HepG2SUCLG1
ABCB1ENSG00000085563.102852.407801148.693301.3121026.4660024.76700HepG2SUPV3L1
ABCB1ENSG00000085563.101105.762001545.21780-0.482806.919206.10240HepG2TAF15
ABCB1ENSG00000085563.101170.505001907.09830-0.704203.221302.07140HepG2TBRG4
ABCB1ENSG00000085563.101936.00620769.996401.3301025.1921022.88900HepG2TFIP11
ABCB1ENSG00000085563.10603.205101205.78080-0.9992020.2645019.13980HepG2TIAL1
ABCB1ENSG00000085563.102035.095201216.556000.7422021.0575019.68530HepG2TRIM56
ABCB1ENSG00000085563.103493.597301327.099301.3963037.2211034.85520HepG2U2AF1
ABCB1ENSG00000085563.103588.453001809.726300.987503.181302.12190HepG2U2AF2
ABCB1ENSG00000085563.103092.717601384.568901.1593020.7140018.46260HepG2UBE2L3
ABCB1ENSG00000085563.102998.274001594.875200.9106038.2392036.27040HepG2UPF1
ABCB1ENSG00000085563.10440.260801052.14350-1.256909.302007.40330HepG2UPF2
ABCB1ENSG00000085563.102742.948701539.793100.8329020.3975018.99610HepG2UTP3
ABCB1ENSG00000085563.103235.905801754.060900.8834045.5054043.98360HepG2ZNF622
ABCB1ENSG00000085563.101680.774601248.687100.428602.565301.32150HepG2ZRANB2
ABCB1ENSG00000085563.1070.5197013.513902.383506.775704.87890K562AARS
ABCB1ENSG00000085563.1047.9969017.994201.415303.009201.66840K562CIRBP
ABCB1ENSG00000085563.10149.5271062.537201.257507.016606.04560K562DDX47
ABCB1ENSG00000085563.1030.228207.690101.974702.876901.94580K562EFTUD2
ABCB1ENSG00000085563.1084.2306040.179201.067803.354802.57500K562EIF2S2
ABCB1ENSG00000085563.1018.1039062.37200-1.784603.102801.75870K562EXOSC5
ABCB1ENSG00000085563.1017.1784040.67460-1.243502.059201.32400K562FIP1L1
ABCB1ENSG00000085563.1049.5644016.774201.563003.298101.93640K562HNRNPK
ABCB1ENSG00000085563.1047.6756014.323701.734703.733902.06530K562LARP7
ABCB1ENSG00000085563.1011.8388039.50290-1.738403.145202.28380K562MTPAP
ABCB1ENSG00000085563.1083.1971015.703202.405409.307307.48590K562PCBP2
ABCB1ENSG00000085563.10149.834007.483204.3235015.1746013.40450K562PRPF8
ABCB1ENSG00000085563.1047.7798017.306501.465003.249702.05500K562NELFE
ABCB1ENSG00000085563.1055.702007.626202.868607.116305.79050K562RPS19
ABCB1ENSG00000085563.1042.682906.406802.735906.027103.80440K562SERBP1
ABCB1ENSG00000085563.1018.8490043.31620-1.200402.149401.42280K562SF3A3
ABCB1ENSG00000085563.1056.0147023.412801.258402.420101.51580K562SF3B1
ABCB1ENSG00000085563.1028.1569081.23560-1.528602.971101.59870K562SFPQ
ABCB1ENSG00000085563.1080.3335044.380300.856002.362201.48820K562SRPK2
ABCB1ENSG00000085563.1032.5944013.780501.241902.013301.32860K562U2AF2
ABCB1ENSG00000085563.1016.0995046.52550-1.531003.079502.32300K562UPF1
ABCB1ENSG00000085563.10122.8130055.338301.150004.461902.92810K562UTP3
ABCB1ENSG00000085563.1017.0076039.80860-1.226902.085501.32740K562WDR3
ABCB1ENSG00000085563.1030.9725062.81410-1.020102.512201.69770K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ABCB1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ABCB1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ABCB1 is not avaliable on ENCORE database.