ZBED6

General Information

Gene Name       : ZBED6
Gene ID             : ENSG00000257315.2
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZBED6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZBED6ENSG00000257315.25.553.544.54ENCSR000AEF
HepG2ZBED6ENSG00000257315.22.304.113.21ENCSR985KAT
K562ZBED6ENSG00000257315.22.882.412.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZBED6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZBED6 RNA is bound by 9 proteins.  







eCLIP assay for ZBED6 is not avaliable on ENCORE database.





9 proteins are bound to ZBED6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1203766593203766624+5'-UTR,intron-Distal4.576568.93178HepG2HLTF
chr1203766518203766603+5'-UTR,intron-Distal3.918008.62334K562SAFB2
chr1203765799203765870+5'-UTR,intron-Distal,intron-Proximal3.363684.79053K562FTO
chr1203766497203766559+5'-UTR,intron-Distal5.1037814.95272HepG2HLTF
chr1203765482203765520+5'-UTR,intron-Distal,intron-Proximal3.622335.96194HepG2PCBP2
chr1203766330203766388+5'-UTR,intron-Distal3.6336017.16306HepG2HLTF
chr1203769146203769242+5'-UTR,CDS,intron-Distal3.8288415.45324HepG2HLTF
chr1203767517203767551+CDS,intron-Distal3.887308.01794HepG2HLTF
chr1203768436203768478+5'-UTR,CDS,intron-Distal3.734259.15184HepG2HLTF
chr1203769520203769559+5'-UTR,CDS,intron-Distal3.461474.48636K562SAFB2
chr1203767463203767512+CDS,intron-Distal3.412615.51957K562SAFB2
chr1203766901203766961+CDS,intron-Distal3.803306.82083K562SAFB
chr1203767459203767515+CDS,intron-Distal3.532717.36868K562SAFB
chr1203769406203769466+5'-UTR,CDS,intron-Distal3.165613.55321K562SAFB2
chr1203768430203768490+5'-UTR,CDS,intron-Distal4.883366.25977K562SAFB2
chr1203769416203769505+5'-UTR,CDS,intron-Distal3.752133.34065K562IGF2BP1
chr1203768602203768710+5'-UTR,CDS,intron-Distal4.379446.56854K562FXR1
chr1203766995203767075+CDS,intron-Distal3.299726.77943K562SAFB
chr1203766998203767099+CDS,intron-Distal3.3893725.86242HepG2HLTF
chr1203768989203769026+5'-UTR,CDS,intron-Distal5.1360513.16727HepG2HLTF
chr1203768797203768881+5'-UTR,CDS,intron-Distal4.1190718.16734HepG2HLTF
chr1203768985203769054+5'-UTR,CDS,intron-Distal4.034676.16438K562SAFB2
chr1203768071203768106+5'-UTR,CDS,intron-Distal3.466586.94634HepG2HLTF
chr1203768615203768678+5'-UTR,CDS,intron-Distal3.012614.99157K562SAFB
chr1203767238203767294+CDS,intron-Distal3.439588.70556HepG2HLTF
chr1203767465203767517+CDS,intron-Distal3.2545316.93693HepG2HLTF
chr1203767253203767304+CDS,intron-Distal3.258304.16850K562SAFB
chr1203766889203766998+CDS,intron-Distal3.2110523.17046HepG2HLTF
chr1203768365203768394+5'-UTR,CDS,intron-Distal3.108116.63863HepG2HLTF
chr1203766902203767004+CDS,intron-Distal3.4061112.19111K562SAFB2
chr1203767452203767557+CDS,intron-Distal3.384924.63571HepG2SAFB
chr1203767009203767077+CDS,intron-Distal3.518047.98908K562SAFB2
chr1203766912203766965+CDS,intron-Distal3.606856.03043K562PPIL4
chr1203767793203767848+CDS,intron-Distal4.6622814.82134HepG2HLTF
chr1203769329203769374+5'-UTR,CDS,intron-Distal3.129899.66019HepG2HLTF
chr1203768614203768675+5'-UTR,CDS,intron-Distal4.2941218.10712HepG2HLTF
chr1203767197203767274+CDS,intron-Distal4.796094.89275HepG2SRSF9
chr1203767218203767264+CDS,intron-Distal3.816734.90935K562SAFB2
chr1203769512203769554+5'-UTR,CDS,intron-Distal3.4833211.59382HepG2HLTF
chr1203767823203767898+CDS,intron-Distal3.122363.72666K562PPIL4
chr1203768847203768865+5'-UTR,CDS,intron-Distal4.151703.65589K562SAFB2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZBED6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZBED6 is not available on ENCORE database.

  • 119 RBPs can affect the levels of ZBED6.  








The Knockdown/knockout RNA-Seq assay for ZBED6 is not available on ENCORE database.





119 RBPs can affect the gene expression of ZBED6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZBED6ENSG00000257315.1608.34800722.85590-0.248801.904501.38270HepG2ACO1
ZBED6ENSG00000257315.1372.38530501.49760-0.429402.486401.54030HepG2ADAR
ZBED6ENSG00000257315.1534.29370761.43680-0.511103.032702.47870HepG2AKAP1
ZBED6ENSG00000257315.1114.97500413.96090-1.8482019.6845017.08040HepG2BCCIP
ZBED6ENSG00000257315.1536.80820396.705400.436202.659502.07170HepG2BOP1
ZBED6ENSG00000257315.1529.17020390.010200.440102.353801.63860HepG2CALR
ZBED6ENSG00000257315.1518.41520760.46730-0.552803.346402.26490HepG2CCAR1
ZBED6ENSG00000257315.1472.37100722.75820-0.613608.750407.69660HepG2CKAP4
ZBED6ENSG00000257315.11391.19950771.380400.850706.481805.30930HepG2CNOT7
ZBED6ENSG00000257315.1432.79960565.26710-0.385202.350301.33230HepG2CPSF7
ZBED6ENSG00000257315.1331.88100432.32030-0.381402.319801.72220HepG2CELF1
ZBED6ENSG00000257315.1656.28170464.814100.497605.741604.72820HepG2DAZAP1
ZBED6ENSG00000257315.1535.02910668.56540-0.321502.890802.03960HepG2DDX19B
ZBED6ENSG00000257315.1396.80010515.01570-0.376202.456101.36800HepG2DDX1
ZBED6ENSG00000257315.1705.93980513.349700.459503.297902.56130HepG2DDX21
ZBED6ENSG00000257315.1290.02810407.01210-0.488902.206201.50900HepG2DDX55
ZBED6ENSG00000257315.1694.08770535.109100.375202.264101.34920HepG2DDX5
ZBED6ENSG00000257315.1306.13850505.01940-0.722206.507405.46420HepG2DNAJC21
ZBED6ENSG00000257315.1383.47200500.47840-0.384203.203202.50980HepG2DNAJC2
ZBED6ENSG00000257315.1349.77130514.89700-0.557903.368402.35870HepG2EEF2
ZBED6ENSG00000257315.1271.97590429.25990-0.658404.406703.00300HepG2EFTUD2
ZBED6ENSG00000257315.1809.99990602.370600.427202.707902.12180HepG2EIF2S1
ZBED6ENSG00000257315.1936.37750648.102000.530803.072602.35040HepG2EIF4B
ZBED6ENSG00000257315.1556.56770706.41210-0.344002.311801.54930HepG2EWSR1
ZBED6ENSG00000257315.1442.73280693.07720-0.646604.720903.73740HepG2FIP1L1
ZBED6ENSG00000257315.1389.77860671.56520-0.784905.765504.79020HepG2FXR1
ZBED6ENSG00000257315.1814.38700623.045000.386302.272901.66640HepG2G3BP1
ZBED6ENSG00000257315.1218.64400372.17030-0.767405.571004.29450HepG2GEMIN5
ZBED6ENSG00000257315.1269.58500412.83050-0.614803.441502.73350HepG2GPKOW
ZBED6ENSG00000257315.1216.06570567.09430-1.3921018.0856016.47690HepG2HNRNPC
ZBED6ENSG00000257315.1612.45770480.789600.349102.730002.01670HepG2HNRNPF
ZBED6ENSG00000257315.1201.24180630.72650-1.6481024.3092022.44020HepG2HNRNPK
ZBED6ENSG00000257315.1330.12610423.39910-0.359002.340701.71390HepG2HNRNPL
ZBED6ENSG00000257315.1274.06710478.20610-0.803106.175204.82960HepG2HNRNPM
ZBED6ENSG00000257315.1248.36470563.34700-1.1816013.7825012.51640HepG2HNRNPU
ZBED6ENSG00000257315.1454.66690735.36130-0.693605.155303.45820HepG2KHDRBS1
ZBED6ENSG00000257315.1317.70970529.22530-0.736202.526901.44570HepG2LARP7
ZBED6ENSG00000257315.1420.42470675.58060-0.684304.937104.11500HepG2MATR3
ZBED6ENSG00000257315.1258.00550437.47270-0.761803.459002.28630HepG2METAP2
ZBED6ENSG00000257315.1435.34640560.95140-0.365702.171401.45010HepG2MSI2
ZBED6ENSG00000257315.1204.24740373.75550-0.871804.239102.86720HepG2NONO
ZBED6ENSG00000257315.1549.99340349.340100.654704.776103.80350HepG2NSUN2
ZBED6ENSG00000257315.1890.73290615.917100.532203.619202.80060HepG2PABPC4
ZBED6ENSG00000257315.1339.33750557.65100-0.716607.592306.30050HepG2PARN
ZBED6ENSG00000257315.1317.44370581.04660-0.872202.581001.57580HepG2PCBP2
ZBED6ENSG00000257315.1196.33620345.66670-0.816106.486404.65220HepG2PKM
ZBED6ENSG00000257315.1303.89920502.46520-0.725407.716406.53490HepG2PPIL4
ZBED6ENSG00000257315.1711.01310467.080200.606108.993908.05490HepG2PUM1
ZBED6ENSG00000257315.1846.75770612.792200.466504.197703.45120HepG2QKI
ZBED6ENSG00000257315.1567.48450731.85060-0.367002.883402.01040HepG2RBM15
ZBED6ENSG00000257315.1939.54150556.110100.756506.055605.09410HepG2RBM25
ZBED6ENSG00000257315.1204.51940406.71610-0.991809.364408.31290HepG2RPS19
ZBED6ENSG00000257315.1364.89710501.70140-0.459303.294902.60250HepG2SAFB2
ZBED6ENSG00000257315.1413.57960729.70700-0.819206.672604.66350HepG2SART3
ZBED6ENSG00000257315.1767.92990389.948900.9776012.0043010.63190HepG2SF3B1
ZBED6ENSG00000257315.1847.50840589.074900.524705.869205.06210HepG2SF3B4
ZBED6ENSG00000257315.1872.93600421.905601.0489021.1385019.55380HepG2SLBP
ZBED6ENSG00000257315.1299.24560585.09550-0.9673011.7832010.59910HepG2SMN1
ZBED6ENSG00000257315.11049.83360899.134900.223502.151501.69240HepG2SRFBP1
ZBED6ENSG00000257315.1799.22750614.832000.378303.267102.76420HepG2SRSF1
ZBED6ENSG00000257315.1264.24220419.60420-0.667203.490202.35190HepG2SRSF3
ZBED6ENSG00000257315.1562.63410434.439800.372902.974102.32670HepG2SRSF5
ZBED6ENSG00000257315.1382.72290674.20300-0.816906.565104.80820HepG2STIP1
ZBED6ENSG00000257315.1613.41630494.065600.312102.490901.89490HepG2SUCLG1
ZBED6ENSG00000257315.1642.563801084.49760-0.755103.363301.88790HepG2SUGP2
ZBED6ENSG00000257315.1321.50560468.01610-0.541703.824802.73160HepG2SUPT6H
ZBED6ENSG00000257315.1769.99280552.538700.478704.447303.76190HepG2TAF15
ZBED6ENSG00000257315.1514.60960384.030200.422202.420301.73580HepG2TARDBP
ZBED6ENSG00000257315.1201.10690547.49840-1.4449018.5718017.48780HepG2TIAL1
ZBED6ENSG00000257315.1383.85000552.28360-0.524902.402701.86980HepG2TRIM56
ZBED6ENSG00000257315.1207.89590332.14930-0.676003.650001.86020HepG2TROVE2
ZBED6ENSG00000257315.1897.57850592.893900.598205.392704.53180HepG2U2AF1
ZBED6ENSG00000257315.174.09580239.34420-1.6916014.0137012.33210HepG2UCHL5
ZBED6ENSG00000257315.185.08240371.00250-2.1245018.8395016.24340HepG2UPF2
ZBED6ENSG00000257315.1269.45750770.65190-1.5160035.3113033.53500HepG2UTP3
ZBED6ENSG00000257315.1392.01630694.11050-0.824306.314404.66190HepG2XPO5
ZBED6ENSG00000257315.193.55190398.84610-2.0920025.0764023.00290HepG2XRN2
ZBED6ENSG00000257315.1723.85020877.89150-0.278402.748202.20250HepG2ZNF622
ZBED6ENSG00000257315.1547.01290742.37580-0.440603.784402.30090K562APOBEC3C
ZBED6ENSG00000257315.1908.19740528.500400.781006.618705.77490K562AQR
ZBED6ENSG00000257315.1495.47810352.956800.489202.707301.30880K562BUD13
ZBED6ENSG00000257315.1432.91520860.65760-0.9914013.3594010.79400K562CCDC124
ZBED6ENSG00000257315.1346.47590634.86500-0.873708.168407.12660K562DDX47
ZBED6ENSG00000257315.1513.21190806.37120-0.651905.346604.07650K562DKC1
ZBED6ENSG00000257315.1227.10430355.81610-0.647803.532602.07060K562EEF2
ZBED6ENSG00000257315.1206.90420343.72410-0.732304.779303.56550K562EFTUD2
ZBED6ENSG00000257315.172.63800158.68160-1.127303.971902.74200K562EIF3A
ZBED6ENSG00000257315.1201.05060353.80360-0.815406.789205.55540K562EIF3G
ZBED6ENSG00000257315.1280.69950639.75040-1.188508.570207.12500K562EIF4A3
ZBED6ENSG00000257315.1263.96620364.24690-0.464602.469301.66960K562FIP1L1
ZBED6ENSG00000257315.1265.48120665.32090-1.325409.129508.10430K562FXR1
ZBED6ENSG00000257315.1314.40060489.36600-0.638304.991003.97730K562GRSF1
ZBED6ENSG00000257315.1154.17240317.68830-1.043107.986907.02070K562HNRNPC
ZBED6ENSG00000257315.1199.05620620.56940-1.6404014.3632011.49190K562HNRNPK
ZBED6ENSG00000257315.1443.09150573.79600-0.372902.362401.39400K562HNRNPL
ZBED6ENSG00000257315.1124.87340299.59070-1.262509.215807.32340K562HNRNPM
ZBED6ENSG00000257315.1377.99740493.85210-0.385702.126701.42560K562HSPD1
ZBED6ENSG00000257315.1942.16570554.424300.764904.350502.54410K562ILF2
ZBED6ENSG00000257315.1184.05200307.61810-0.741004.738302.84980K562LARP7
ZBED6ENSG00000257315.1283.78020652.88920-1.2021010.081408.40870K562MAGOH
ZBED6ENSG00000257315.1539.20230761.30920-0.497702.899601.79260K562MAK16
ZBED6ENSG00000257315.1636.57840890.92630-0.485004.161603.00960K562MBNL1
ZBED6ENSG00000257315.1416.69080638.77010-0.616303.431402.05370K562NCBP2
ZBED6ENSG00000257315.1202.27100338.94480-0.744803.419001.95310K562NONO
ZBED6ENSG00000257315.1126.24340312.78300-1.3090010.340107.25580K562NUSAP1
ZBED6ENSG00000257315.1385.27500638.00930-0.727703.686202.12110K562PCBP1
ZBED6ENSG00000257315.1146.84480310.15670-1.078708.151205.67480K562PHF6
ZBED6ENSG00000257315.1256.60900523.73920-1.029307.789105.13780K562PKM
ZBED6ENSG00000257315.1587.76960864.55220-0.556705.633403.68220K562PNPT1
ZBED6ENSG00000257315.1280.53720413.48140-0.559603.505402.56340K562PPIG
ZBED6ENSG00000257315.1244.78280334.48590-0.450402.142001.47870K562PRPF8
ZBED6ENSG00000257315.1100.72920284.83870-1.4997012.3449010.16040K562PSIP1
ZBED6ENSG00000257315.1289.02950634.29300-1.133909.533208.35360K562PTBP1
ZBED6ENSG00000257315.1712.38960917.97020-0.365802.721501.91260K562PUF60
ZBED6ENSG00000257315.1556.53390976.63700-0.811407.594005.75220K562PUM1
ZBED6ENSG00000257315.1644.89350956.67440-0.569007.678006.05360K562PUM2
ZBED6ENSG00000257315.1769.12370608.428900.338002.070001.34800K562RBM22
ZBED6ENSG00000257315.1838.11880648.115000.370802.779801.44750K562RBM25
ZBED6ENSG00000257315.11329.72900626.809701.084905.998103.51340K562RBM39
ZBED6ENSG00000257315.1143.88360259.86850-0.852905.174703.81420K562RCC2
ZBED6ENSG00000257315.1384.24660640.22320-0.736503.428802.19310K562NELFE
ZBED6ENSG00000257315.1103.76500340.63310-1.7149016.3400014.33390K562RPS19
ZBED6ENSG00000257315.1299.83960641.86230-1.098106.323504.73010K562RPS3
ZBED6ENSG00000257315.1530.59310710.60940-0.421502.113501.36820K562SF3B4
ZBED6ENSG00000257315.1390.40890621.77390-0.671404.638603.72720K562SRSF1
ZBED6ENSG00000257315.1363.57540619.75470-0.769406.257204.56240K562SRSF4
ZBED6ENSG00000257315.1403.74700587.10790-0.540203.415302.22720K562SRSF5
ZBED6ENSG00000257315.1667.18150437.132500.609904.705302.99870K562STAU1
ZBED6ENSG00000257315.1199.05280323.71440-0.701604.014902.77420K562SUPV3L1
ZBED6ENSG00000257315.1195.32790340.44900-0.801504.629503.56100K562SYNCRIP
ZBED6ENSG00000257315.1194.34390295.17160-0.602903.174101.36480K562TFIP11
ZBED6ENSG00000257315.1394.73820607.07520-0.621003.324002.41600K562TIA1
ZBED6ENSG00000257315.1183.26640273.96840-0.580102.608801.70170K562TIAL1
ZBED6ENSG00000257315.1366.94010595.49310-0.698503.526402.26330K562TRA2A
ZBED6ENSG00000257315.1208.68050291.04490-0.479902.224701.39000K562TRIM56
ZBED6ENSG00000257315.11704.92150662.314501.364009.375207.18130K562U2AF1
ZBED6ENSG00000257315.11746.40600684.249001.3517040.0579037.14440K562U2AF2
ZBED6ENSG00000257315.1588.82840430.409200.452002.179301.40320K562WDR3
ZBED6ENSG00000257315.1225.46290349.05680-0.630603.902702.37090K562XRN2
ZBED6ENSG00000257315.11109.82230629.733800.817403.749501.78960K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZBED6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZBED6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZBED6 is not avaliable on ENCORE database.