TP53I3

General Information

Gene Name       : TP53I3
Gene ID             : ENSG00000115129.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TP53I3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TP53I3ENSG00000115129.132.944.393.67ENCSR000AEF
HepG2TP53I3ENSG00000115129.1327.9118.0222.96ENCSR985KAT
K562TP53I3ENSG00000115129.133.483.843.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TP53I3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TP53I3 RNA is bound by 5 proteins.  







eCLIP assay for TP53I3 is not avaliable on ENCORE database.





5 proteins are bound to TP53I3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr22430752424307629-5'-UTR,intron-Distal,intron-Proximal3.6280314.39387HepG2PRPF8
chr22430717324307297-5'-UTR,CDS,intron-Distal,intron-Proximal3.814016.53375HepG2AQR
chr22430718624307237-5'-UTR,CDS,intron-Distal,intron-Proximal3.056304.46036HepG2PRPF8
chr22430755924307602-5'-UTR,intron-Distal,intron-Proximal4.880246.03362HepG2AQR
chr22430734824307422-5'-UTR,intron-Distal,intron-Proximal3.948969.08333HepG2PRPF8
chr22430755224307590-5'-UTR,intron-Distal,intron-Proximal3.347413.64266HepG2PPIG
chr22430734424307403-5'-UTR,intron-Distal,intron-Proximal4.486336.41037HepG2BUD13
chr22430760224307701-5'-UTR,intron-Distal,intron-Proximal4.334713.72434HepG2NCBP2
chr22430747824307524-5'-UTR,intron-Distal,intron-Proximal5.594228.72621HepG2PRPF8
chr22430753924307589-5'-UTR,intron-Distal,intron-Proximal5.742649.88352HepG2BUD13
chr22430719824307250-5'-UTR,intron-Distal,intron-Proximal3.288376.22359HepG2BUD13
chr22430700824307065-CDS,intron-Distal,intron-Proximal6.1485112.84241HepG2PRPF8
chr22430590724306016-CDS,intron-Distal4.236689.56105HepG2PPIG
chr22430706924307173-CDS,intron-Distal3.153366.69553HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TP53I3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TP53I3 is not available on ENCORE database.

  • 128 RBPs can affect the levels of TP53I3.  








The Knockdown/knockout RNA-Seq assay for TP53I3 is not available on ENCORE database.





128 RBPs can affect the gene expression of TP53I3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TP53I3ENSG00000115129.9765.07780391.536700.966409.750408.14960HepG2ABCF1
TP53I3ENSG00000115129.9818.43420431.712400.9227018.2761017.00720HepG2ACO1
TP53I3ENSG00000115129.92859.52570475.774502.5873074.8786072.73750HepG2AKAP1
TP53I3ENSG00000115129.9446.38870212.431901.071204.939803.56130HepG2AKAP8
TP53I3ENSG00000115129.9774.42800433.707300.836309.137507.84590HepG2AKAP8L
TP53I3ENSG00000115129.9264.28800133.632200.983703.721501.79620HepG2APOBEC3C
TP53I3ENSG00000115129.9817.78740393.641501.0547012.6038011.03210HepG2ASCC1
TP53I3ENSG00000115129.9803.91150665.464700.272602.165501.54450HepG2AUH
TP53I3ENSG00000115129.91034.63480502.587601.0416011.386909.43190HepG2BCCIP
TP53I3ENSG00000115129.9597.45860436.708000.452102.417501.57850HepG2BCLAF1
TP53I3ENSG00000115129.91276.99900436.246901.5494035.2839033.57150HepG2BOP1
TP53I3ENSG00000115129.9712.70530285.256701.3209010.808409.43950HepG2CALR
TP53I3ENSG00000115129.9856.39090503.823500.765305.983804.51930HepG2CCAR1
TP53I3ENSG00000115129.9984.27870431.578401.1893033.3410031.61430HepG2CKAP4
TP53I3ENSG00000115129.9445.65990143.090201.6389011.244809.74270HepG2CNOT7
TP53I3ENSG00000115129.9977.39250310.442901.6545033.6560030.86830HepG2CSTF2
TP53I3ENSG00000115129.9399.26840272.529900.550802.651301.33790HepG2CSTF2T
TP53I3ENSG00000115129.91025.32230509.754601.0081022.2336020.77070HepG2CELF1
TP53I3ENSG00000115129.9516.18440399.253600.370503.049802.17740HepG2DDX19B
TP53I3ENSG00000115129.91408.17760293.336402.2631069.2763066.69280HepG2DDX21
TP53I3ENSG00000115129.9402.77840287.241400.487603.002602.04920HepG2DDX24
TP53I3ENSG00000115129.91207.85910455.708801.4062023.4242021.78760HepG2DDX3X
TP53I3ENSG00000115129.91056.44380494.148801.0961012.7123011.20020HepG2DDX55
TP53I3ENSG00000115129.9598.32610391.574400.611503.921003.19520HepG2DDX6
TP53I3ENSG00000115129.9688.59410413.021400.737309.791608.67640HepG2DKC1
TP53I3ENSG00000115129.9398.68700262.425500.603204.743303.84350HepG2DNAJC21
TP53I3ENSG00000115129.9391.16990260.078500.588705.279704.42380HepG2DNAJC2
TP53I3ENSG00000115129.9736.48450241.481301.6086023.4602021.25210HepG2EEF2
TP53I3ENSG00000115129.9464.03330201.296101.204803.940302.61240HepG2EFTUD2
TP53I3ENSG00000115129.9699.63660376.319700.894508.588807.58030HepG2EIF2S1
TP53I3ENSG00000115129.9422.00590196.020101.106209.309807.74740HepG2EIF3D
TP53I3ENSG00000115129.9378.15860277.135000.448302.588301.54490HepG2EIF3G
TP53I3ENSG00000115129.9933.41960415.824101.1665014.3703012.93660HepG2EIF4A3
TP53I3ENSG00000115129.9930.98360404.965001.2009012.1800010.78950HepG2EIF4B
TP53I3ENSG00000115129.91001.86570540.740500.8896018.0058016.26090HepG2EIF4G1
TP53I3ENSG00000115129.9986.23530764.037100.368203.892303.19950HepG2ETF1
TP53I3ENSG00000115129.9572.21480421.824500.439803.117202.23320HepG2EWSR1
TP53I3ENSG00000115129.9276.27800175.210900.656903.989502.55910HepG2FAM120A
TP53I3ENSG00000115129.9769.88150395.368400.961309.184407.88880HepG2FIP1L1
TP53I3ENSG00000115129.9930.27200512.784100.859208.738105.94480HepG2FMR1
TP53I3ENSG00000115129.9687.23320321.075801.097809.821307.88990HepG2FUS
TP53I3ENSG00000115129.9673.03400419.710600.681205.433304.48580HepG2FXR1
TP53I3ENSG00000115129.9260.34760389.25820-0.580303.224202.50880HepG2G3BP1
TP53I3ENSG00000115129.9269.10580174.528000.624603.280002.29440HepG2GEMIN5
TP53I3ENSG00000115129.9494.77350333.697800.568103.142302.05350HepG2GNB2L1
TP53I3ENSG00000115129.9303.74110132.464601.197107.674905.83540HepG2GRSF1
TP53I3ENSG00000115129.9691.20100264.939301.3833021.1421019.64380HepG2HNRNPA1
TP53I3ENSG00000115129.9844.36900294.686101.5186019.1201017.46750HepG2HNRNPC
TP53I3ENSG00000115129.9568.96060736.87740-0.373103.391902.60370HepG2HNRNPF
TP53I3ENSG00000115129.9166.54380394.35750-1.2436011.4288010.10070HepG2HNRNPK
TP53I3ENSG00000115129.9679.66790499.239500.445002.130401.52920HepG2HNRNPL
TP53I3ENSG00000115129.9524.54850272.815500.9431010.354908.72830HepG2HNRNPM
TP53I3ENSG00000115129.9818.88650292.738601.4840015.0146013.69400HepG2HNRNPU
TP53I3ENSG00000115129.9529.60220231.308501.1950010.789808.44400HepG2HSPD1
TP53I3ENSG00000115129.9883.68960395.642201.159209.982408.78470HepG2IGF2BP2
TP53I3ENSG00000115129.91219.01170371.414801.714502.752801.77270HepG2IGF2BP3
TP53I3ENSG00000115129.9434.47220299.024500.538905.067304.10040HepG2ILF2
TP53I3ENSG00000115129.9483.11150295.336900.709905.237603.04080HepG2CCAR2
TP53I3ENSG00000115129.9758.34550531.766400.512002.964602.10370HepG2LARP4
TP53I3ENSG00000115129.9694.43380327.027301.0863012.7553010.46560HepG2LARP7
TP53I3ENSG00000115129.9598.43650343.232200.801906.899105.03950HepG2LIN28B
TP53I3ENSG00000115129.9781.63010419.857800.896504.028003.23840HepG2MAGOH
TP53I3ENSG00000115129.9448.88210276.795000.697404.789402.70520HepG2MARK2
TP53I3ENSG00000115129.91098.86310422.181501.380007.449106.45230HepG2MATR3
TP53I3ENSG00000115129.9655.49730205.146501.675804.165702.88720HepG2METAP2
TP53I3ENSG00000115129.9514.49610320.030300.684905.694804.57250HepG2MSI2
TP53I3ENSG00000115129.91087.94900432.104801.332108.266407.20020HepG2NCBP2
TP53I3ENSG00000115129.9704.52450453.760700.634602.951001.81890HepG2NONO
TP53I3ENSG00000115129.9241.79620384.17490-0.668003.732002.86520HepG2NSUN2
TP53I3ENSG00000115129.9541.99840384.719400.494402.903502.16510HepG2PABPC4
TP53I3ENSG00000115129.9506.11110289.773400.804409.382907.97500HepG2PARN
TP53I3ENSG00000115129.9545.99230303.924500.845105.695004.25110HepG2PCBP2
TP53I3ENSG00000115129.9183.77120301.22740-0.712905.202204.17620HepG2PRPF4
TP53I3ENSG00000115129.9581.71450319.480600.864505.769404.06890HepG2PRPF6
TP53I3ENSG00000115129.9816.98970381.192901.0997013.1332011.55920HepG2PRPF8
TP53I3ENSG00000115129.9886.05780410.592301.1096023.6334022.33140HepG2PTBP1
TP53I3ENSG00000115129.9698.80730518.799700.429603.235902.59750HepG2PUF60
TP53I3ENSG00000115129.9821.55130550.741500.576908.151607.24520HepG2PUM1
TP53I3ENSG00000115129.9737.43410439.721200.7458011.7889010.66940HepG2PUS1
TP53I3ENSG00000115129.9591.48020377.472600.647906.384705.15000HepG2RBM15
TP53I3ENSG00000115129.92197.20630638.594701.7826026.1985024.92970HepG2RBM22
TP53I3ENSG00000115129.9749.53950394.359600.926409.046807.23890HepG2RBM27
TP53I3ENSG00000115129.9511.98540320.239100.676903.822902.56890HepG2RCC2
TP53I3ENSG00000115129.91299.27590456.953801.5075047.3478045.73950HepG2NELFE
TP53I3ENSG00000115129.93116.48910793.795101.9730018.7266017.26540HepG2RPLP0
TP53I3ENSG00000115129.9419.60590288.156300.542102.398601.51830HepG2RPS10
TP53I3ENSG00000115129.92465.62370190.745603.69210194.86740191.28030HepG2RPS19
TP53I3ENSG00000115129.91722.16950363.673002.2434022.5735020.49220HepG2RPS2
TP53I3ENSG00000115129.9457.11170143.708901.6693016.9648015.06560HepG2RPS3A
TP53I3ENSG00000115129.9676.58740371.264700.865707.744405.96900HepG2RPS5
TP53I3ENSG00000115129.9733.94430377.078400.960709.196607.88140HepG2RRP9
TP53I3ENSG00000115129.9383.86160191.428101.003708.027406.45070HepG2SERBP1
TP53I3ENSG00000115129.9683.73990326.934401.064304.152603.31730HepG2SF3A3
TP53I3ENSG00000115129.9266.68820428.88470-0.685404.656903.76040HepG2SF3B1
TP53I3ENSG00000115129.9628.84700427.488100.556705.526004.73930HepG2SF3B4
TP53I3ENSG00000115129.9396.28220497.47430-0.328102.161901.52870HepG2SLBP
TP53I3ENSG00000115129.9837.50120304.032901.4618041.3631039.41510HepG2SMN1
TP53I3ENSG00000115129.9511.12100299.317100.771904.049302.87230HepG2SMNDC1
TP53I3ENSG00000115129.91181.47210721.271300.7119014.4263013.51960HepG2SRFBP1
TP53I3ENSG00000115129.91434.99860446.201501.6852064.5748062.97640HepG2SRSF1
TP53I3ENSG00000115129.91971.95170512.254401.94460105.27880102.23550HepG2SRSF5
TP53I3ENSG00000115129.91658.27280626.237701.4048057.8636056.26860HepG2SSB
TP53I3ENSG00000115129.9330.17580230.456700.518602.547201.31510HepG2SSRP1
TP53I3ENSG00000115129.91216.47950582.561301.0621017.1966015.85800HepG2SUCLG1
TP53I3ENSG00000115129.91928.10260491.916601.9706044.5002042.43690HepG2SUPV3L1
TP53I3ENSG00000115129.9464.68250226.361001.037503.116701.98620HepG2TBRG4
TP53I3ENSG00000115129.9246.81690368.52390-0.578304.010103.00940HepG2TIA1
TP53I3ENSG00000115129.97090.14870284.487204.63930127.18370124.77900HepG2TIAL1
TP53I3ENSG00000115129.9388.02630286.990600.435102.990102.40910HepG2TRIM56
TP53I3ENSG00000115129.9748.22850506.866200.561805.393704.12610HepG2TUFM
TP53I3ENSG00000115129.9514.75770338.237600.605804.153903.39130HepG2U2AF1
TP53I3ENSG00000115129.9427.37450289.940900.559604.874903.98940HepG2UPF1
TP53I3ENSG00000115129.9732.15870279.926401.3870030.0016028.34800HepG2UTP3
TP53I3ENSG00000115129.9981.94560322.538201.6061021.2502018.70640HepG2XRCC6
TP53I3ENSG00000115129.9727.58790484.238000.587304.237103.34750HepG2XRN2
TP53I3ENSG00000115129.9983.47730297.266201.7260045.0592043.02650HepG2ZC3H8
TP53I3ENSG00000115129.9652.86640318.879401.033707.915807.11340HepG2ZNF622
TP53I3ENSG00000115129.929.5328061.86160-1.066702.436201.89840K562AGGF1
TP53I3ENSG00000115129.9155.8586082.084100.925003.596502.16320K562APOBEC3C
TP53I3ENSG00000115129.9124.0090048.572301.352103.819002.53540K562CNOT7
TP53I3ENSG00000115129.9214.18010114.376700.904904.755003.46480K562CELF1
TP53I3ENSG00000115129.963.1827030.410701.054902.580101.57550K562DDX3X
TP53I3ENSG00000115129.9188.5760070.047801.4286010.491109.31510K562DDX47
TP53I3ENSG00000115129.968.3842024.167301.500503.080702.01290K562EIF3A
TP53I3ENSG00000115129.988.5173037.788001.227904.361203.37190K562EIF3G
TP53I3ENSG00000115129.964.8701031.771101.029702.497801.71740K562EIF4A3
TP53I3ENSG00000115129.9166.4624093.024900.839403.828402.72630K562EIF4G2
TP53I3ENSG00000115129.995.7226033.040501.534505.989005.14880K562FXR1
TP53I3ENSG00000115129.9346.39390130.892001.4039012.2944010.68070K562GRSF1
TP53I3ENSG00000115129.9103.6626053.985600.941103.371402.18120K562HNRNPA1
TP53I3ENSG00000115129.996.2987039.985101.268004.018603.31550K562HNRNPC
TP53I3ENSG00000115129.9166.7396073.377701.184105.732404.60310K562HSPD1
TP53I3ENSG00000115129.997.2885034.612401.490906.328704.85230K562MATR3
TP53I3ENSG00000115129.982.8186039.109601.082302.971802.06200K562METAP2
TP53I3ENSG00000115129.9157.0158099.156000.663002.341601.30740K562MSI2
TP53I3ENSG00000115129.9102.3875048.850301.067503.787102.85330K562MTPAP
TP53I3ENSG00000115129.994.2350046.663801.013902.509201.34700K562PABPC1
TP53I3ENSG00000115129.9137.7952065.517701.072504.047103.04130K562PCBP3
TP53I3ENSG00000115129.9118.3670050.254201.235905.225004.12330K562POLR2G
TP53I3ENSG00000115129.962.4009033.704100.888502.136701.54070K562PTBP1
TP53I3ENSG00000115129.9207.64240101.497801.032605.685304.51960K562PUF60
TP53I3ENSG00000115129.9176.59900105.778400.739303.195202.16460K562PUM2
TP53I3ENSG00000115129.964.2594032.299600.992302.465801.67540K562RBM22
TP53I3ENSG00000115129.990.3675033.994501.410405.333403.75260K562NELFE
TP53I3ENSG00000115129.9139.9579053.871001.377305.672804.49880K562RPS19
TP53I3ENSG00000115129.968.5208033.045101.052002.578601.89260K562SRSF1
TP53I3ENSG00000115129.963.3342033.435500.921502.087801.46720K562TARDBP
TP53I3ENSG00000115129.997.2928051.210200.925803.196902.29290K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TP53I3 is not available on ENCORE database.





4 RBPs can affect the splicing of TP53I3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETP53I3ENSG00000115129.9chr2-2430231324302510243003022430063124303688243039010.067000.000540.04175includedHepG2HNRNPL
SETP53I3ENSG00000115129.9chr2-2430231324302510243003022430063124303688243039010.082000.000010.00042includedHepG2SRSF1
SETP53I3ENSG00000115129.9chr2-243023132430251024300302243006312430368824303901-0.176000.000010.00063excludedHepG2HNRNPC
A3SSTP53I3ENSG00000115129.9chr2-2430050324300728243005032430063124303688243038620.538000.000080.01010longerHepG2SRSF1
MXETP53I3ENSG00000115129.9chr2-2430231324302510243036882430386224300503243007282430575424306022-0.512000.003110.055672includedHepG2SRSF1
MXETP53I3ENSG00000115129.9chr2-24305754243060222430705824307201243036882430390124307600243080850.206000.000350.016301includedHepG2XRN2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TP53I3 is not avaliable on ENCORE database.