TINAGL1

General Information

Gene Name       : TINAGL1
Gene ID             : ENSG00000142910.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TINAGL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TINAGL1ENSG00000142910.150.000.010.01ENCSR000AEF
HepG2TINAGL1ENSG00000142910.1522.608.7315.67ENCSR985KAT
K562TINAGL1ENSG00000142910.150.100.020.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TINAGL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TINAGL1 RNA is bound by 9 proteins.  







eCLIP assay for TINAGL1 is not avaliable on ENCORE database.





9 proteins are bound to TINAGL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13204875032048852+3'-UTR,CDS,intron-Distal,intron-Proximal4.076436.36347HepG2PPIG
chr13205271232052800+3'-UTR4.607284.78280HepG2AKAP1
chr13205293432052994+3'-UTR6.0448210.94465HepG2UPF1
chr13205268532052791+3'-UTR4.9515614.33051HepG2UPF1
chr13204270632042758+5'-UTR,CDS,intron-Distal,intron-Proximal4.759604.28193HepG2AQR
chr13204212632042197+5'-UTR,intron-Proximal5.0217116.21744HepG2DDX3X
chr13204273332042767+5'-UTR,CDS,intron-Distal,intron-Proximal5.1217815.05408HepG2DDX3X
chr13205145832051542+CDS,intron-Proximal3.241273.01637HepG2AQR
chr13205220832052328+CDS,intron-Distal,intron-Proximal4.980504.90219HepG2AQR
chr13204276732042871+CDS,intron-Distal6.2292357.95113HepG2DDX3X
chr13204289932042940+CDS,intron-Distal4.716466.80282HepG2DDX3X
chr13205138732051472+CDS4.706775.54796HepG2LIN28B
chr13204583232045901+CDS,intron-Distal,intron-Proximal3.410793.19404HepG2PTBP1
chr13205216032052198+intron-Distal5.142974.24412HepG2SUPV3L1
chr13205149632051554+intron-Proximal4.030597.53528HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TINAGL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TINAGL1 is not available on ENCORE database.

  • 115 RBPs can affect the levels of TINAGL1.  








The Knockdown/knockout RNA-Seq assay for TINAGL1 is not available on ENCORE database.





115 RBPs can affect the gene expression of TINAGL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TINAGL1ENSG00000142910.11172.72090432.89960-1.3256013.5867011.49220HepG2AATF
TINAGL1ENSG00000142910.11420.05470860.20980-1.0341018.0995016.83530HepG2ACO1
TINAGL1ENSG00000142910.11564.21500320.572200.815507.102805.59690HepG2ADAR
TINAGL1ENSG00000142910.11353.232301120.98490-1.666109.654208.72560HepG2AKAP1
TINAGL1ENSG00000142910.11904.791601314.07740-0.538402.993101.91450HepG2AKAP8
TINAGL1ENSG00000142910.11431.77150927.43250-1.103006.041104.90330HepG2ASCC1
TINAGL1ENSG00000142910.11544.38180203.968201.416208.020406.59130HepG2BCLAF1
TINAGL1ENSG00000142910.11169.82330274.15710-0.691001.885901.38380HepG2BOP1
TINAGL1ENSG00000142910.11622.43690360.724400.786909.222607.93630HepG2CALR
TINAGL1ENSG00000142910.11321.49150946.29580-1.557503.235202.40280HepG2CNOT7
TINAGL1ENSG00000142910.11772.79590251.672301.6184027.1894025.32100HepG2CPSF6
TINAGL1ENSG00000142910.111152.70890661.433300.801303.533002.28780HepG2CPSF7
TINAGL1ENSG00000142910.11694.38380328.734901.0787017.9945015.57450HepG2YBX3
TINAGL1ENSG00000142910.111348.81490593.425001.1845042.1605039.93640HepG2DAZAP1
TINAGL1ENSG00000142910.11400.14250795.50750-0.9914020.0948018.34220HepG2DDX19B
TINAGL1ENSG00000142910.11532.98100329.208400.695007.049105.31170HepG2DDX1
TINAGL1ENSG00000142910.11264.22450467.30910-0.822606.869605.44100HepG2DDX24
TINAGL1ENSG00000142910.11474.754501073.62900-1.177206.048605.15780HepG2DDX3X
TINAGL1ENSG00000142910.11523.45350230.909501.180607.794606.57550HepG2DDX55
TINAGL1ENSG00000142910.113641.25090922.716401.9804051.5292049.37280HepG2DDX6
TINAGL1ENSG00000142910.11353.89230822.95200-1.2175025.9993024.44850HepG2DKC1
TINAGL1ENSG00000142910.11132.17760322.81410-1.2882013.6034012.13720HepG2DNAJC21
TINAGL1ENSG00000142910.11568.09420319.932900.8283012.6222011.33780HepG2DNAJC2
TINAGL1ENSG00000142910.113279.90860886.586101.8872054.4123052.10560HepG2EIF2S1
TINAGL1ENSG00000142910.11245.28810444.72670-0.858402.396601.55110HepG2EIF3D
TINAGL1ENSG00000142910.11264.79100450.82950-0.767705.694304.22360HepG2EIF3G
TINAGL1ENSG00000142910.11824.354901273.80250-0.627803.891901.77380HepG2EIF3H
TINAGL1ENSG00000142910.11693.40270979.56730-0.498502.135201.57100HepG2EIF4A3
TINAGL1ENSG00000142910.11347.80820954.15580-1.455908.410607.24390HepG2EIF4B
TINAGL1ENSG00000142910.11386.55170585.43970-0.598906.111004.95470HepG2EIF4G1
TINAGL1ENSG00000142910.11407.55110840.45630-1.044207.866806.46510HepG2EWSR1
TINAGL1ENSG00000142910.11462.94480988.99160-1.095104.446203.58380HepG2FXR1
TINAGL1ENSG00000142910.11438.80640917.09320-1.063505.152004.25610HepG2G3BP1
TINAGL1ENSG00000142910.11658.07780974.05830-0.565802.346001.52990HepG2G3BP2
TINAGL1ENSG00000142910.11564.50880374.470100.592003.899602.68740HepG2GNB2L1
TINAGL1ENSG00000142910.111149.07620821.170500.484607.193005.70870HepG2HDGF
TINAGL1ENSG00000142910.11847.28300545.368700.635508.658007.18080HepG2HNRNPA2B1
TINAGL1ENSG00000142910.11237.77850362.50040-0.608403.455902.68700HepG2HNRNPC
TINAGL1ENSG00000142910.11650.65520384.213200.759902.930602.19380HepG2HNRNPF
TINAGL1ENSG00000142910.111234.53900929.437400.409402.189401.56250HepG2HNRNPK
TINAGL1ENSG00000142910.11658.285701430.39300-1.1196011.100008.74620HepG2HSPD1
TINAGL1ENSG00000142910.11592.24380378.341200.646404.544103.63640HepG2IGF2BP1
TINAGL1ENSG00000142910.11127.98570932.08370-2.8645019.6181018.00360HepG2IGF2BP2
TINAGL1ENSG00000142910.11356.52710875.20970-1.295606.233204.79010HepG2IGF2BP3
TINAGL1ENSG00000142910.11508.44400367.836600.466904.345303.44670HepG2ILF2
TINAGL1ENSG00000142910.111416.64330786.253900.8493025.2193022.59640HepG2KIF1C
TINAGL1ENSG00000142910.11573.797601429.46930-1.3169014.3045011.61240HepG2KRR1
TINAGL1ENSG00000142910.11333.98250989.33980-1.566708.914407.74990HepG2MAGOH
TINAGL1ENSG00000142910.11658.83370994.77140-0.594502.438901.84390HepG2MATR3
TINAGL1ENSG00000142910.11445.02820277.734900.680102.431601.52790HepG2MTPAP
TINAGL1ENSG00000142910.111067.16260588.438300.8587012.8551011.26700HepG2NOL12
TINAGL1ENSG00000142910.11353.59450214.423700.721503.414301.80810HepG2NOLC1
TINAGL1ENSG00000142910.111711.48160865.330700.983807.111805.64160HepG2PABPC1
TINAGL1ENSG00000142910.111317.90250906.306000.540103.405902.61000HepG2PABPC4
TINAGL1ENSG00000142910.11526.66080946.06720-0.8451012.0329010.91020HepG2PCBP1
TINAGL1ENSG00000142910.111242.17620817.975400.602606.173803.63630HepG2PES1
TINAGL1ENSG00000142910.11938.39850321.186301.5467037.4327034.99830HepG2PPIL4
TINAGL1ENSG00000142910.11281.72690177.934300.662902.061901.36030HepG2PRPF8
TINAGL1ENSG00000142910.11349.65180962.73050-1.4612019.5512018.34490HepG2PTBP1
TINAGL1ENSG00000142910.11370.23870596.27860-0.687509.341608.38720HepG2PUM1
TINAGL1ENSG00000142910.11264.75230876.15930-1.7266044.2737042.41250HepG2PUS1
TINAGL1ENSG00000142910.11601.944501042.50800-0.792407.511306.55720HepG2QKI
TINAGL1ENSG00000142910.11153.91360422.03290-1.455207.223906.11490HepG2RAVER1
TINAGL1ENSG00000142910.111251.02420966.468400.372203.724002.74500HepG2RBM15
TINAGL1ENSG00000142910.11446.56860741.44680-0.731509.178208.35980HepG2RBM22
TINAGL1ENSG00000142910.111670.17810946.200800.819705.797204.85280HepG2RBM25
TINAGL1ENSG00000142910.11275.80770442.47310-0.681904.976803.62720HepG2RBM27
TINAGL1ENSG00000142910.11403.979001071.36700-1.4071025.9957024.67810HepG2NELFE
TINAGL1ENSG00000142910.11478.96210997.94080-1.0590017.2094015.88680HepG2RECQL
TINAGL1ENSG00000142910.11225.28250413.87840-0.877507.148906.12670HepG2RPLP0
TINAGL1ENSG00000142910.11215.27310432.84270-1.007703.205502.55000HepG2RPS19
TINAGL1ENSG00000142910.11274.90090408.05820-0.569903.557002.65210HepG2RPS2
TINAGL1ENSG00000142910.11323.19170175.994900.876802.969602.15810HepG2RRP9
TINAGL1ENSG00000142910.11271.88790459.60280-0.757402.858001.30770HepG2RTF1
TINAGL1ENSG00000142910.11998.56870320.695001.6386055.0294052.73390HepG2SAFB2
TINAGL1ENSG00000142910.11665.633701002.19800-0.590407.104406.22650HepG2SF3B4
TINAGL1ENSG00000142910.111179.45520538.586601.1308034.8461032.93230HepG2SLBP
TINAGL1ENSG00000142910.111131.51760412.105601.457104.007802.09470HepG2SLTM
TINAGL1ENSG00000142910.11503.29800373.994700.428303.652702.93090HepG2SMN1
TINAGL1ENSG00000142910.11710.57630411.641500.787505.353203.07420HepG2SND1
TINAGL1ENSG00000142910.111183.88310440.552001.426005.979203.86790HepG2SNRNP200
TINAGL1ENSG00000142910.11129.21520299.77350-1.214102.279501.57320HepG2SNRNP70
TINAGL1ENSG00000142910.11149.847501046.13030-2.8035058.3330056.79330HepG2SRSF1
TINAGL1ENSG00000142910.11480.29880289.968000.727902.255001.36270HepG2SRSF3
TINAGL1ENSG00000142910.11497.85790377.473700.399303.085802.35660HepG2SRSF7
TINAGL1ENSG00000142910.11412.77060727.14280-0.8169012.8104011.86640HepG2SSB
TINAGL1ENSG00000142910.111038.457701425.63180-0.457203.202001.82880HepG2SSRP1
TINAGL1ENSG00000142910.11793.66030394.450801.008603.213101.91060HepG2SUB1
TINAGL1ENSG00000142910.11385.24650630.74220-0.711309.416508.38560HepG2SUCLG1
TINAGL1ENSG00000142910.11779.819701442.93560-0.887806.703204.67010HepG2SUGP2
TINAGL1ENSG00000142910.111137.91160547.573701.055205.005703.76030HepG2SUPT6H
TINAGL1ENSG00000142910.11326.48240940.44840-1.5263027.0868025.56950HepG2TAF15
TINAGL1ENSG00000142910.11502.84680265.460500.921507.656606.52710HepG2TARDBP
TINAGL1ENSG00000142910.11766.573601400.27680-0.869203.479102.28830HepG2TBRG4
TINAGL1ENSG00000142910.111328.54330863.989400.620709.007207.51470HepG2TIA1
TINAGL1ENSG00000142910.11929.02210353.034301.3958012.2157011.15270HepG2TRIM56
TINAGL1ENSG00000142910.11233.00180694.00700-1.574604.118603.35900HepG2U2AF1
TINAGL1ENSG00000142910.11893.41490580.852600.621104.599503.50140HepG2UBE2L3
TINAGL1ENSG00000142910.11233.13850574.84040-1.3020011.103709.87510HepG2UPF1
TINAGL1ENSG00000142910.11283.18130590.82950-1.061009.091707.32340HepG2UTP18
TINAGL1ENSG00000142910.11152.58540554.98050-1.8628019.3534017.98870HepG2UTP3
TINAGL1ENSG00000142910.11448.41890226.225100.987004.957303.99480HepG2XRN2
TINAGL1ENSG00000142910.11168.80620445.22450-1.399202.446801.80910HepG2ZC3H8
TINAGL1ENSG00000142910.111428.75100632.209501.1762042.5847041.10480HepG2ZNF622
TINAGL1ENSG00000142910.1134.5502011.212401.623502.545401.99630K562AGGF1
TINAGL1ENSG00000142910.1123.170704.744302.287902.892901.58190K562CIRBP
TINAGL1ENSG00000142910.1123.884205.810702.039202.678001.84350K562FIP1L1
TINAGL1ENSG00000142910.1132.801605.173002.664604.044802.92430K562FTO
TINAGL1ENSG00000142910.1132.238205.730402.492003.878802.94590K562GPKOW
TINAGL1ENSG00000142910.1143.7885016.704401.390202.204901.52620K562GRSF1
TINAGL1ENSG00000142910.1145.936304.675303.296407.278606.35450K562HNRNPC
TINAGL1ENSG00000142910.1126.099804.172702.644903.641102.31480K562HNRNPF
TINAGL1ENSG00000142910.1123.349204.891002.255102.398301.53730K562KRR1
TINAGL1ENSG00000142910.1142.115805.593202.912506.095504.77000K562METAP2
TINAGL1ENSG00000142910.1122.456904.137502.440202.917501.91460K562PCBP2
TINAGL1ENSG00000142910.1132.572206.351502.358403.251002.43650K562PRPF8
TINAGL1ENSG00000142910.1146.644005.447003.098106.511404.98580K562SF3B1
TINAGL1ENSG00000142910.1135.7865010.021701.836203.222801.84650K562TROVE2
TINAGL1ENSG00000142910.1159.407903.176804.2249014.1898012.35160K562U2AF2
TINAGL1ENSG00000142910.1128.108507.480601.909702.747501.55070K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TINAGL1 is not available on ENCORE database.





21 RBPs can affect the splicing of TINAGL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETINAGL1ENSG00000142910.11chr1+320513533205147732051040320510863205231032052356-0.127000.000580.03965excludedHepG2RBM22
SETINAGL1ENSG00000142910.11chr1+3204273432043059320421153204219632044804320448680.064000.000480.09385includedHepG2ILF3
SETINAGL1ENSG00000142910.11chr1+320513533205147732051040320510863205231032052356-0.163000.000000.00002excludedHepG2U2AF2
SETINAGL1ENSG00000142910.11chr1+320513533205147732051040320510863205231032052356-0.160000.003590.06863excludedHepG2SRSF1
A5SSTINAGL1ENSG00000142910.11chr1+320510403205147732051040320510863205231032052356-0.284000.000010.00068shorterHepG2U2AF2
A5SSTINAGL1ENSG00000142910.11chr1+320510403205147732051040320510863205231032052356-0.166000.001370.09276shorterHepG2RBM22
A5SSTINAGL1ENSG00000142910.11chr1+320510403205147732051040320510863205231032052356-0.226000.000770.04698shorterHepG2SRSF1
RITINAGL1ENSG00000142910.11chr1+3205104032052356320510403205147732052310320523560.138000.000050.01236includedHepG2UPF1
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.228000.000010.00043includedHepG2PCBP2
RITINAGL1ENSG00000142910.11chr1+320487493204917632048749320488423204906132049176-0.067000.000430.03695excludedHepG2DDX3X
RITINAGL1ENSG00000142910.11chr1+3204874932049176320487493204884232049061320491760.296000.000090.00118includedHepG2U2AF2
RITINAGL1ENSG00000142910.11chr1+320510403205235632051040320510863205231032052356-0.563000.000020.00030excludedHepG2U2AF2
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.172000.001270.01821includedHepG2PRPF8
RITINAGL1ENSG00000142910.11chr1+3205104032052356320510403205147732052310320523560.088000.004370.04928includedHepG2PRPF8
RITINAGL1ENSG00000142910.11chr1+320510403205235632051040320514773205231032052356-0.079000.000440.08136excludedHepG2XRCC6
RITINAGL1ENSG00000142910.11chr1+320487493205040232048749320491763205027832050402-0.113000.000000.00122excludedHepG2NOL12
RITINAGL1ENSG00000142910.11chr1+3205104032051477320510403205108632051353320514770.064000.000870.02390includedHepG2FTO
RITINAGL1ENSG00000142910.11chr1+3204874932049176320487493204884232049061320491760.494000.001640.03761includedHepG2FTO
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.123000.000010.00031includedHepG2PCBP1
RITINAGL1ENSG00000142910.11chr1+3204874932049176320487493204884232049061320491760.074000.007940.07885includedHepG2PCBP1
RITINAGL1ENSG00000142910.11chr1+3205104032051477320510403205108632051353320514770.067000.010020.08591includedHepG2QKI
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.057000.011290.09375includedHepG2QKI
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.102000.000240.00374includedHepG2TAF15
RITINAGL1ENSG00000142910.11chr1+3204874932049176320487493204884232049061320491760.113000.000830.01030includedHepG2TAF15
RITINAGL1ENSG00000142910.11chr1+3205104032052356320510403205147732052310320523560.053000.013250.09639includedHepG2TAF15
RITINAGL1ENSG00000142910.11chr1+3204874932049176320487493204884232049061320491760.196000.001320.01470includedHepG2U2AF1
RITINAGL1ENSG00000142910.11chr1+3205104032052356320510403205147732052310320523560.093000.001850.01945includedHepG2U2AF1
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.088000.000410.00438includedHepG2SF3B4
RITINAGL1ENSG00000142910.11chr1+3205104032052356320510403205147732052310320523560.057000.001920.03370includedHepG2FUBP3
RITINAGL1ENSG00000142910.11chr1+3205104032051477320510403205108632051353320514770.104000.007730.06283includedHepG2RBM22
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.159000.000100.00182includedHepG2RBM22
RITINAGL1ENSG00000142910.11chr1+3204874932049176320487493204884232049061320491760.119000.000310.00483includedHepG2RBM22
RITINAGL1ENSG00000142910.11chr1+3205104032052356320510403205147732052310320523560.133000.000070.00133includedHepG2RBM22
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.119000.000000.00000includedHepG2HNRNPK
RITINAGL1ENSG00000142910.11chr1+3204874932050402320487493204917632050278320504020.207000.000080.00636includedHepG2XRN2
MXETINAGL1ENSG00000142910.11chr1+32042734320430593204874932049176320421383204219632050278320504020.207000.000000.000011includedHepG2NCBP2
MXETINAGL1ENSG00000142910.11chr1+32042734320430593204874932049176320421383204219632050278320504020.109000.000180.014851includedHepG2DDX6
MXETINAGL1ENSG00000142910.11chr1+3204480432044868320487493204884232042168320421963204906132049176-0.054000.000270.020332includedHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TINAGL1 is not avaliable on ENCORE database.