ST6GALNAC6

General Information

Gene Name       : ST6GALNAC6
Gene ID             : ENSG00000160408.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ST6GALNAC6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ST6GALNAC6ENSG00000160408.144.5310.977.75ENCSR000AEF
HepG2ST6GALNAC6ENSG00000160408.1419.1315.5817.36ENCSR985KAT
K562ST6GALNAC6ENSG00000160408.1411.259.7610.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ST6GALNAC6 RNA is bound by 20 proteins.  







eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.





20 proteins are bound to ST6GALNAC6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9130648606130648676-3'-UTR,intron-Distal3.920803.77005HepG2AKAP1
chr9130648164130648247-3'-UTR,intron-Distal4.041745.91795HepG2UPF1
chr9130648611130648676-3'-UTR,intron-Distal3.955383.76270HepG2GRSF1
chr9130648481130648537-3'-UTR,intron-Distal4.261493.35877HepG2UPF1
chr9130648265130648327-3'-UTR,intron-Distal,intron-Proximal4.154189.77119HepG2XPO5
chr9130648106130648155-3'-UTR,intron-Distal4.413555.04923HepG2AKAP1
chr9130647747130647800-3'-UTR,intron-Distal,intron-Proximal5.756016.59792K562PABPC4
chr9130648181130648266-3'-UTR,intron-Distal5.105887.76785HepG2AKAP1
chr9130648776130648864-3'-UTR,CDS,intron-Distal3.714473.47999HepG2YBX3
chr9130648349130648393-3'-UTR,intron-Distal,intron-Proximal3.496083.27723HepG2AKAP1
chr9130647686130647812-3'-UTR,intron-Distal,intron-Proximal4.393457.23656K562DDX55
chr9130658565130658677-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.706153.93614HepG2AQR
chr9130647718130647816-3'-UTR,intron-Distal,intron-Proximal4.190343.99014HepG2PABPN1
chr9130648614130648681-3'-UTR,intron-Distal4.085114.54434HepG2UPF1
chr9130648537130648614-3'-UTR,intron-Distal5.188185.07111HepG2UPF1
chr9130648557130648606-3'-UTR,intron-Distal4.590375.31599HepG2AKAP1
chr9130648326130648420-3'-UTR,intron-Distal,intron-Proximal4.5324410.45182HepG2UPF1
chr9130647628130647690-3'-UTR,intron-Distal,intron-Proximal3.631605.85035HepG2SF3B4
chr9130656957130657024-5'-UTR,CDS,intron-Distal,intron-Proximal3.850917.09030K562SF3B4
chr9130656947130657037-5'-UTR,CDS,intron-Distal,intron-Proximal3.920753.50006HepG2SF3B4
chr9130652985130653030-CDS,intron-Distal3.100293.86052K562YBX3
chr9130656773130656792-CDS,intron-Distal,intron-Proximal5.206366.83960K562AQR
chr9130649719130649796-CDS,intron-Distal,intron-Proximal4.176807.13970HepG2PRPF8
chr9130653265130653354-CDS,intron-Distal,intron-Proximal3.311738.74912HepG2BUD13
chr9130653030130653130-CDS,intron-Distal3.717533.25175K562YBX3
chr9130656744130656799-CDS,intron-Distal,intron-Proximal3.428053.44979HepG2PRPF8
chr9130653835130653941-intron-Distal4.139243.62238HepG2MATR3
chr9130653963130654101-intron-Distal3.316033.60809HepG2HNRNPK
chr9130652767130652843-intron-Distal,intron-Proximal4.530805.57311HepG2RBFOX2
chr9130656748130656773-intron-Distal,intron-Proximal4.247595.63763K562AQR
chr9130653858130653901-intron-Distal5.9255512.98435HepG2PTBP1
chr9130653854130653918-intron-Distal4.8061510.02898K562PTBP1
chr9130661598130661735-intron-Distal,intron-Proximal4.1107112.16892HepG2EFTUD2
chr9130661561130661706-intron-Distal,intron-Proximal3.602647.27025HepG2XRN2
chr9130661563130661723-intron-Distal,intron-Proximal4.232964.35952HepG2PRPF4
chr9130661247130661340-intron-Distal3.675635.32871HepG2CSTF2T
chr9130659989130660110-intron-Distal,intron-Proximal4.598053.87340HepG2CSTF2T
chr9130653901130653978-intron-Distal4.540869.54872HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ST6GALNAC6 is not available on ENCORE database.

  • 108 RBPs can affect the levels of ST6GALNAC6.  








The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not available on ENCORE database.





108 RBPs can affect the gene expression of ST6GALNAC6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ST6GALNAC6ENSG00000160408.101024.223001305.98180-0.350604.724903.97030HepG2ACO1
ST6GALNAC6ENSG00000160408.101752.258102704.82860-0.626306.166705.40860HepG2AKAP1
ST6GALNAC6ENSG00000160408.102412.575801845.502100.386502.682601.66010HepG2AKAP8
ST6GALNAC6ENSG00000160408.101064.770101312.05720-0.301302.384501.66680HepG2AKAP8L
ST6GALNAC6ENSG00000160408.103181.637202237.925900.507505.195404.13710HepG2ASCC1
ST6GALNAC6ENSG00000160408.102342.464601522.966500.6210015.6945014.29510HepG2AUH
ST6GALNAC6ENSG00000160408.101731.687102126.21360-0.296102.059801.38540HepG2CIRBP
ST6GALNAC6ENSG00000160408.101101.582201305.62530-0.245202.768602.10260HepG2CKAP4
ST6GALNAC6ENSG00000160408.10659.27860419.327800.652705.447204.51220HepG2CPSF6
ST6GALNAC6ENSG00000160408.10183.06730457.70670-1.322008.704606.97540HepG2CSTF2
ST6GALNAC6ENSG00000160408.101960.160501280.894000.613706.410305.50920HepG2CELF1
ST6GALNAC6ENSG00000160408.101642.260201377.205100.253803.527502.70810HepG2DAZAP1
ST6GALNAC6ENSG00000160408.10780.743901207.81270-0.6295013.3142011.77840HepG2DDX19B
ST6GALNAC6ENSG00000160408.10507.34990960.57370-0.9209012.9722011.63770HepG2DDX21
ST6GALNAC6ENSG00000160408.10631.12990940.44070-0.575406.207804.84650HepG2DDX24
ST6GALNAC6ENSG00000160408.10944.49760476.181400.987902.230101.35540HepG2DDX59
ST6GALNAC6ENSG00000160408.10829.594701149.95310-0.471103.978602.77310HepG2DDX5
ST6GALNAC6ENSG00000160408.103661.398802226.038400.717808.282507.26800HepG2DDX6
ST6GALNAC6ENSG00000160408.101045.73130755.624200.468702.510201.57520HepG2DHX30
ST6GALNAC6ENSG00000160408.10830.655101249.45190-0.5890010.000708.87500HepG2DKC1
ST6GALNAC6ENSG00000160408.101024.35850783.387900.386802.137801.51200HepG2DNAJC21
ST6GALNAC6ENSG00000160408.10647.519501115.97800-0.785308.828107.29170HepG2EEF2
ST6GALNAC6ENSG00000160408.10672.68300930.36160-0.467903.545702.28290HepG2EFTUD2
ST6GALNAC6ENSG00000160408.10585.21090905.94180-0.630505.554904.30540HepG2EIF3D
ST6GALNAC6ENSG00000160408.10596.51720907.40390-0.605206.855505.28180HepG2EIF3G
ST6GALNAC6ENSG00000160408.101433.030502364.15160-0.722307.996906.91320HepG2EIF4A3
ST6GALNAC6ENSG00000160408.101265.287402302.26280-0.863608.678407.49630HepG2EIF4B
ST6GALNAC6ENSG00000160408.10529.508001276.11310-1.2690028.5031026.14890HepG2EWSR1
ST6GALNAC6ENSG00000160408.101601.896602386.01060-0.574806.157705.15210HepG2FXR1
ST6GALNAC6ENSG00000160408.101623.905002349.86880-0.533105.634004.35250HepG2G3BP2
ST6GALNAC6ENSG00000160408.10472.03880806.62900-0.773007.993906.50940HepG2GEMIN5
ST6GALNAC6ENSG00000160408.10895.99530475.308500.914502.887602.23500HepG2GPKOW
ST6GALNAC6ENSG00000160408.101676.994701246.794700.427607.006405.54040HepG2HDGF
ST6GALNAC6ENSG00000160408.101567.840601265.724900.308703.666202.61480HepG2HNRNPA2B1
ST6GALNAC6ENSG00000160408.101275.12580762.980200.7408015.3162013.80640HepG2HNRNPF
ST6GALNAC6ENSG00000160408.101720.131702241.71590-0.382103.451802.67520HepG2HNRNPK
ST6GALNAC6ENSG00000160408.101686.650801254.507100.426908.507107.38520HepG2HNRNPL
ST6GALNAC6ENSG00000160408.10654.91590453.598600.529803.592702.88540HepG2HNRNPLL
ST6GALNAC6ENSG00000160408.101154.73980873.970000.401802.279401.72400HepG2HNRNPU
ST6GALNAC6ENSG00000160408.10918.56300751.317000.289902.009601.38540HepG2IGF2BP1
ST6GALNAC6ENSG00000160408.101466.301902249.35560-0.617306.906605.88630HepG2IGF2BP2
ST6GALNAC6ENSG00000160408.101176.879002111.43630-0.843303.229902.16520HepG2IGF2BP3
ST6GALNAC6ENSG00000160408.101578.895002262.70560-0.519103.842802.64170HepG2KHSRP
ST6GALNAC6ENSG00000160408.101500.493201193.785900.329805.023603.65730HepG2KIF1C
ST6GALNAC6ENSG00000160408.101075.589401408.93280-0.389502.202001.46780HepG2LARP4
ST6GALNAC6ENSG00000160408.101109.829202386.84670-1.1048019.2242017.57960HepG2MAGOH
ST6GALNAC6ENSG00000160408.101031.532002400.09480-1.2183020.6436019.05130HepG2MATR3
ST6GALNAC6ENSG00000160408.10761.18130462.682000.718104.449303.19960HepG2MTPAP
ST6GALNAC6ENSG00000160408.101708.416602456.54050-0.524004.980804.14170HepG2NCBP2
ST6GALNAC6ENSG00000160408.102463.456001365.637500.8510021.6900019.68670HepG2NOL12
ST6GALNAC6ENSG00000160408.10651.91430402.225300.696605.974504.90130HepG2NSUN2
ST6GALNAC6ENSG00000160408.101627.131402187.29590-0.426803.523102.71430HepG2PABPC4
ST6GALNAC6ENSG00000160408.101508.579702176.70810-0.5290011.5923010.48780HepG2PCBP1
ST6GALNAC6ENSG00000160408.10620.90480892.98540-0.524306.685505.54190HepG2PRPF4
ST6GALNAC6ENSG00000160408.101048.270302214.82650-1.0792039.7702038.19960HepG2PTBP1
ST6GALNAC6ENSG00000160408.10684.121801330.21650-0.9593027.5907026.02000HepG2PUS1
ST6GALNAC6ENSG00000160408.102362.169401454.187800.6998013.8487012.15970HepG2RBM15
ST6GALNAC6ENSG00000160408.101323.315402177.04770-0.7182012.7727011.38570HepG2RBM25
ST6GALNAC6ENSG00000160408.10715.30800939.89030-0.393902.683801.64230HepG2RCC2
ST6GALNAC6ENSG00000160408.101102.064202464.93530-1.1613047.0529045.44890HepG2NELFE
ST6GALNAC6ENSG00000160408.101400.087002295.66870-0.7134019.8601018.46540HepG2RECQL
ST6GALNAC6ENSG00000160408.10441.81420881.50880-0.9965015.1464013.86720HepG2RPS19
ST6GALNAC6ENSG00000160408.10346.469701067.42350-1.6233033.3187030.78370HepG2RPS2
ST6GALNAC6ENSG00000160408.101121.038801526.62510-0.445502.684901.89660HepG2RPS3A
ST6GALNAC6ENSG00000160408.101225.13560778.269500.654505.646704.77960HepG2SAFB2
ST6GALNAC6ENSG00000160408.10524.04240884.75110-0.755608.107806.52600HepG2SERBP1
ST6GALNAC6ENSG00000160408.10848.91860448.954400.9190011.3908010.04980HepG2SF3B1
ST6GALNAC6ENSG00000160408.101420.545502306.01960-0.6990018.8390017.51230HepG2SF3B4
ST6GALNAC6ENSG00000160408.101541.607401250.034300.302404.358703.50680HepG2SLBP
ST6GALNAC6ENSG00000160408.10982.63540404.528901.280304.976103.08570HepG2SNRNP200
ST6GALNAC6ENSG00000160408.101317.86730499.547201.3994015.9720014.11430HepG2SNRNP70
ST6GALNAC6ENSG00000160408.101885.597901650.664400.191902.130301.67250HepG2SRFBP1
ST6GALNAC6ENSG00000160408.10580.159202406.94470-2.05270129.11400127.11120HepG2SRSF1
ST6GALNAC6ENSG00000160408.101123.07000749.605500.583109.501308.34530HepG2SRSF7
ST6GALNAC6ENSG00000160408.10819.891901433.21280-0.8057019.4176018.32270HepG2SSB
ST6GALNAC6ENSG00000160408.101156.33650827.203300.483102.492601.35510HepG2SUB1
ST6GALNAC6ENSG00000160408.101209.477401463.85710-0.275403.252502.58900HepG2SUCLG1
ST6GALNAC6ENSG00000160408.101275.858002163.34320-0.7618018.4091017.14760HepG2TAF15
ST6GALNAC6ENSG00000160408.10586.47820442.203500.407302.421101.73650HepG2TARDBP
ST6GALNAC6ENSG00000160408.10770.92520486.224700.664904.304903.09690HepG2TFIP11
ST6GALNAC6ENSG00000160408.101656.59620856.832800.9510012.4138011.34380HepG2TRIM56
ST6GALNAC6ENSG00000160408.101568.116901185.053100.404006.370005.38200HepG2UPF1
ST6GALNAC6ENSG00000160408.101502.855401218.079800.303003.398502.25170HepG2UTP18
ST6GALNAC6ENSG00000160408.10881.222201144.12440-0.376704.437403.70730HepG2UTP3
ST6GALNAC6ENSG00000160408.10699.36670973.61940-0.477302.622301.59430HepG2XRCC6
ST6GALNAC6ENSG00000160408.10552.70010881.27270-0.6731011.4848010.27520HepG2ZC3H8
ST6GALNAC6ENSG00000160408.101567.709301303.333600.266403.654903.04990HepG2ZNF622
ST6GALNAC6ENSG00000160408.10235.40200332.03860-0.496202.409901.31490K562AARS
ST6GALNAC6ENSG00000160408.10617.06250465.182200.407502.903901.89030K562AKAP8
ST6GALNAC6ENSG00000160408.10644.38760440.484600.548704.628603.77700K562AKAP8L
ST6GALNAC6ENSG00000160408.10582.45400462.184800.333602.459501.60250K562ATP5C1
ST6GALNAC6ENSG00000160408.10829.17450505.867600.712809.425307.24120K562CCDC124
ST6GALNAC6ENSG00000160408.10536.17250352.794000.603802.614301.58790K562CNOT7
ST6GALNAC6ENSG00000160408.10380.48870226.672500.747105.665104.55110K562CPSF6
ST6GALNAC6ENSG00000160408.10497.31450322.554300.624505.267103.76910K562DDX3X
ST6GALNAC6ENSG00000160408.101052.77260512.013601.0398024.5097022.76230K562DDX47
ST6GALNAC6ENSG00000160408.10548.51030293.805100.900605.360603.92090K562EIF3A
ST6GALNAC6ENSG00000160408.10349.03400204.656400.770106.092404.92690K562EIF3G
ST6GALNAC6ENSG00000160408.10456.24040336.984000.437002.634401.83430K562EIF4A3
ST6GALNAC6ENSG00000160408.10411.74380303.466900.440102.987201.77500K562EIF4B
ST6GALNAC6ENSG00000160408.10377.42690282.779700.416402.178501.42400K562FIP1L1
ST6GALNAC6ENSG00000160408.10217.78290315.42000-0.534402.545601.47200K562FKBP4
ST6GALNAC6ENSG00000160408.10362.03150230.631000.650403.952002.92680K562FMR1
ST6GALNAC6ENSG00000160408.1064.79000208.01100-1.6828011.179609.56640K562G3BP2
ST6GALNAC6ENSG00000160408.10359.60040216.417700.732504.906503.85180K562GPKOW
ST6GALNAC6ENSG00000160408.10544.17040363.324300.582704.506503.76300K562HNRNPC
ST6GALNAC6ENSG00000160408.10235.04270364.19420-0.631803.579902.15630K562HNRNPK
ST6GALNAC6ENSG00000160408.10596.86310467.445100.352502.254001.51960K562KIF1C
ST6GALNAC6ENSG00000160408.10391.36080221.895200.818502.939801.90990K562PABPN1
ST6GALNAC6ENSG00000160408.10272.76130361.94610-0.408102.262401.53810K562POLR2G
ST6GALNAC6ENSG00000160408.10490.93810321.034400.612704.635103.53390K562PPIG
ST6GALNAC6ENSG00000160408.10442.22240325.757400.440902.083001.30870K562PSIP1
ST6GALNAC6ENSG00000160408.10635.75770789.69950-0.312802.347001.59570K562PUF60
ST6GALNAC6ENSG00000160408.10583.81590436.800700.418402.788002.24350K562PUS1
ST6GALNAC6ENSG00000160408.10564.81250425.628900.408103.099202.47730K562RBM15
ST6GALNAC6ENSG00000160408.10476.99130356.978800.418002.504701.70870K562RBM22
ST6GALNAC6ENSG00000160408.10775.22770344.932501.1682012.9296011.14040K562RPS19
ST6GALNAC6ENSG00000160408.10355.13060234.629200.597902.855901.83660K562RPS3
ST6GALNAC6ENSG00000160408.10261.41190363.05240-0.473902.801001.97620K562SYNCRIP
ST6GALNAC6ENSG00000160408.10562.20070369.460900.605604.663703.73760K562TARDBP
ST6GALNAC6ENSG00000160408.10133.13060208.12200-0.644603.223002.35810K562U2AF2
ST6GALNAC6ENSG00000160408.10608.29340478.406000.346402.935602.06350K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not available on ENCORE database.





10 RBPs can affect the splicing of ST6GALNAC6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.232000.000180.01611excludedHepG2RBM22
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.467000.000000.00006excludedK562AKAP8L
SEST6GALNAC6ENSG00000160408.10chr9-130660104130660289130658520130658611130667485130667687-0.704000.000430.03201excludedHepG2AKAP1
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.328000.000590.01104excludedK562PUS1
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.262000.001220.04937excludedHepG2MATR3
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.226000.001340.09299excludedHepG2DDX6
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.381000.000000.00000excludedHepG2LARP4
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.443000.000030.00143excludedK562RBM15
SEST6GALNAC6ENSG00000160408.10chr9-130660234130660289130658520130658611130661781130661932-0.380000.000270.00991excludedK562AGGF1
A3SSST6GALNAC6ENSG00000160408.10chr9-130647600130649067130647600130649063130649762130649870-0.140000.014750.07373shorterK562AQR
A3SSST6GALNAC6ENSG00000160408.10chr9-1306567901306569701306567901306569081306585201306586110.086000.002130.08683longerK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not avaliable on ENCORE database.