ST6GALNAC6

General Information

Gene Name : ST6GALNAC6
Gene ID : ENSG00000160408.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ST6GALNAC6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ST6GALNAC6	ENSG00000160408.14	4.53	10.97	7.75	ENCSR000AEF
HepG2	ST6GALNAC6	ENSG00000160408.14	19.13	15.58	17.36	ENCSR985KAT
K562	ST6GALNAC6	ENSG00000160408.14	11.25	9.76	10.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.

Proteins bound to RNA

ST6GALNAC6 RNA is bound by 20 proteins.

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eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.

20 proteins are bound to ST6GALNAC6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	130653858	130653901	-	intron-Distal	5.92555	12.98435	HepG2	PTBP1
chr9	130661598	130661735	-	intron-Distal,intron-Proximal	4.11071	12.16892	HepG2	EFTUD2
chr9	130648326	130648420	-	3'-UTR,intron-Distal,intron-Proximal	4.53244	10.45182	HepG2	UPF1
chr9	130653854	130653918	-	intron-Distal	4.80615	10.02898	K562	PTBP1
chr9	130648265	130648327	-	3'-UTR,intron-Distal,intron-Proximal	4.15418	9.77119	HepG2	XPO5
chr9	130653901	130653978	-	intron-Distal	4.54086	9.54872	HepG2	PTBP1
chr9	130653265	130653354	-	CDS,intron-Distal,intron-Proximal	3.31173	8.74912	HepG2	BUD13
chr9	130648181	130648266	-	3'-UTR,intron-Distal	5.10588	7.76785	HepG2	AKAP1
chr9	130661561	130661706	-	intron-Distal,intron-Proximal	3.60264	7.27025	HepG2	XRN2
chr9	130647686	130647812	-	3'-UTR,intron-Distal,intron-Proximal	4.39345	7.23656	K562	DDX55
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 38 entries

eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ST6GALNAC6 is not available on ENCORE database.
108 RBPs can affect the levels of ST6GALNAC6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not available on ENCORE database.

108 RBPs can affect the gene expression of ST6GALNAC6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ST6GALNAC6	ENSG00000160408.10	580.15920	2406.94470	-2.05270	129.11400	127.11120	HepG2	SRSF1
ST6GALNAC6	ENSG00000160408.10	1102.06420	2464.93530	-1.16130	47.05290	45.44890	HepG2	NELFE
ST6GALNAC6	ENSG00000160408.10	1048.27030	2214.82650	-1.07920	39.77020	38.19960	HepG2	PTBP1
ST6GALNAC6	ENSG00000160408.10	346.46970	1067.42350	-1.62330	33.31870	30.78370	HepG2	RPS2
ST6GALNAC6	ENSG00000160408.10	529.50800	1276.11310	-1.26900	28.50310	26.14890	HepG2	EWSR1
ST6GALNAC6	ENSG00000160408.10	684.12180	1330.21650	-0.95930	27.59070	26.02000	HepG2	PUS1
ST6GALNAC6	ENSG00000160408.10	1052.77260	512.01360	1.03980	24.50970	22.76230	K562	DDX47
ST6GALNAC6	ENSG00000160408.10	2463.45600	1365.63750	0.85100	21.69000	19.68670	HepG2	NOL12
ST6GALNAC6	ENSG00000160408.10	1031.53200	2400.09480	-1.21830	20.64360	19.05130	HepG2	MATR3
ST6GALNAC6	ENSG00000160408.10	1400.08700	2295.66870	-0.71340	19.86010	18.46540	HepG2	RECQL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 122 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not available on ENCORE database.

10 RBPs can affect the splicing of ST6GALNAC6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.46700	0.00000	0.00006	excluded	K562	AKAP8L
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.38100	0.00000	0.00000	excluded	HepG2	LARP4
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.44300	0.00003	0.00143	excluded	K562	RBM15
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.23200	0.00018	0.01611	excluded	HepG2	RBM22
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.38000	0.00027	0.00991	excluded	K562	AGGF1
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660104	130660289	130658520	130658611	130667485	130667687	-0.70400	0.00043	0.03201	excluded	HepG2	AKAP1
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.32800	0.00059	0.01104	excluded	K562	PUS1
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.26200	0.00122	0.04937	excluded	HepG2	MATR3
SE	ST6GALNAC6	ENSG00000160408.10	chr9	-	130660234	130660289	130658520	130658611	130661781	130661932	-0.22600	0.00134	0.09299	excluded	HepG2	DDX6
A3SS	ST6GALNAC6	ENSG00000160408.10	chr9	-	130656790	130656970	130656790	130656908	130658520	130658611	0.08600	0.00213	0.08683	longer	K562	PUS1

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ST6GALNAC6

General Information

Functions

Localization

Domains (AlphaFold: ST6GALNAC6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.

20 proteins are bound to ST6GALNAC6 RNA:

eCLIP assay for ST6GALNAC6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not available on ENCORE database.

108 RBPs can affect the gene expression of ST6GALNAC6 :

The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not available on ENCORE database.

10 RBPs can affect the splicing of ST6GALNAC6 :

The Knockdown/knockout RNA-Seq assay for ST6GALNAC6 is not avaliable on ENCORE database.