PITPNM2

General Information

Gene Name       : PITPNM2
Gene ID             : ENSG00000090975.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PITPNM2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PITPNM2ENSG00000090975.120.180.200.19ENCSR000AEF
HepG2PITPNM2ENSG00000090975.126.904.045.47ENCSR985KAT
K562PITPNM2ENSG00000090975.123.592.683.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PITPNM2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PITPNM2 RNA is bound by 17 proteins.  







eCLIP assay for PITPNM2 is not avaliable on ENCORE database.





17 proteins are bound to PITPNM2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12123470225123470281-3'-UTR,intron-Distal4.741994.77840HepG2EIF3H
chr12123469100123469171-3'-UTR,intron-Distal6.385069.84608K562PUM2
chr12123468078123468158-3'-UTR,intron-Distal3.610224.39142HepG2PCBP2
chr12123468083123468144-3'-UTR,intron-Distal3.203583.47356HepG2HNRNPK
chr12123594932123594987-5'-UTR,intron-Distal,intron-Proximal3.758645.52342HepG2PPIG
chr12123594926123595019-5'-UTR,intron-Distal,intron-Proximal4.003953.80193HepG2GRWD1
chr12123498482123498567-CDS,intron-Distal,intron-Proximal3.760343.34184HepG2GRWD1
chr12123518987123519078-CDS,intron-Distal,intron-Proximal3.743036.55814HepG2PRPF8
chr12123494320123494402-CDS,intron-Distal,intron-Proximal3.878235.64484HepG2PRPF8
chr12123476960123477075-CDS,intron-Distal,intron-Proximal3.517356.46344HepG2PRPF8
chr12123480191123480376-CDS,intron-Distal,intron-Proximal3.623455.37652K562BUD13
chr12123485330123485391-CDS,intron-Distal5.100484.75872K562DDX24
chr12123472256123472362-CDS,intron-Distal,intron-Proximal5.202925.99517HepG2EFTUD2
chr12123481815123481891-CDS,intron-Distal,intron-Proximal4.8683210.09745HepG2PRPF8
chr12123475254123475344-CDS,intron-Distal,intron-Proximal3.467305.08270HepG2SF3B4
chr12123479895123479958-CDS,intron-Distal,intron-Proximal3.730265.73990HepG2PRPF8
chr12123472809123472887-CDS,intron-Distal4.384414.50440HepG2PPIG
chr12123490006123490096-CDS,intron-Distal,intron-Proximal3.615586.98305HepG2PPIG
chr12123480968123481037-CDS,intron-Distal,intron-Proximal3.241445.62208HepG2PRPF8
chr12123485601123485666-CDS,intron-Distal4.012853.60441HepG2GRWD1
chr12123485341123485395-CDS,intron-Distal4.559668.68543HepG2PPIG
chr12123485600123485668-CDS,intron-Distal,intron-Proximal4.081813.36385K562UCHL5
chr12123517505123517564-intron-Distal4.262055.59994HepG2XPO5
chr12123518897123519038-intron-Distal,intron-Proximal3.419623.18246K562PRPF8
chr12123559282123559326-intron-Distal4.422473.72755K562EIF4G2
chr12123514257123514367-intron-Distal4.341944.94713K562HNRNPL
chr12123625907123626012-intron-Distal4.648705.37406HepG2HNRNPM
chr12123475358123475410-intron-Distal3.221203.33980HepG2SF3B4
chr12123559659123559765-intron-Distal3.557414.63615HepG2HNRNPL
chr12123514367123514449-intron-Distal3.661463.19036K562HNRNPL
chr12123481828123481863-intron-Distal,intron-Proximal5.162636.83960K562AQR
chr12123497290123497349-intron-Distal,intron-Proximal4.744453.91589K562SF3B4
chr12123475421123475477-intron-Distal3.997313.06084HepG2HNRNPK
chr12123590457123590688-intron-Distal3.777114.63118HepG2HNRNPM
chr12123514181123514248-intron-Distal4.282964.51074HepG2HNRNPL
chr12123504381123504512-intron-Distal3.310643.84715HepG2HNRNPK
chr12123481863123481871-intron-Distal,intron-Proximal3.932625.26367K562AQR
chr12123515466123515627-intron-Distal3.858966.08725HepG2HNRNPL
chr12123499618123499677-intron-Distal4.716975.68226HepG2HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PITPNM2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PITPNM2 is not available on ENCORE database.

  • 125 RBPs can affect the levels of PITPNM2.  








The Knockdown/knockout RNA-Seq assay for PITPNM2 is not available on ENCORE database.





125 RBPs can affect the gene expression of PITPNM2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PITPNM2ENSG00000090975.81439.91190759.958200.9219026.7689025.33060HepG2ACO1
PITPNM2ENSG00000090975.81373.661401009.887200.443703.089901.99170HepG2AKAP8
PITPNM2ENSG00000090975.81158.88290832.967100.476306.907505.90260HepG2AUH
PITPNM2ENSG00000090975.81165.00100678.508500.7798010.130609.07970HepG2BOP1
PITPNM2ENSG00000090975.81150.79790709.458300.697708.472806.43440HepG2BUD13
PITPNM2ENSG00000090975.8405.54350531.27430-0.389602.318701.60790HepG2CALR
PITPNM2ENSG00000090975.81196.06480904.917700.402302.245201.37600HepG2CCAR1
PITPNM2ENSG00000090975.8940.84900759.755900.308303.289402.57500HepG2CKAP4
PITPNM2ENSG00000090975.8204.89040563.27440-1.459005.815104.70810HepG2CNOT7
PITPNM2ENSG00000090975.8410.99080622.89030-0.599904.667803.79530HepG2CPSF6
PITPNM2ENSG00000090975.81202.86150779.781200.625207.079105.38530HepG2CPSF7
PITPNM2ENSG00000090975.8471.30710365.883800.365202.253101.33680HepG2YBX3
PITPNM2ENSG00000090975.8924.20700465.398500.9896019.4829018.08950HepG2CELF1
PITPNM2ENSG00000090975.8558.74770366.384000.608702.409101.33030HepG2DDX1
PITPNM2ENSG00000090975.8234.11430400.48980-0.774602.305001.48020HepG2DDX24
PITPNM2ENSG00000090975.8881.27680418.448201.0744012.9517011.69130HepG2DDX3X
PITPNM2ENSG00000090975.8580.57520412.886500.491603.608902.06710HepG2DDX52
PITPNM2ENSG00000090975.8770.76360403.542000.933507.860406.63670HepG2DDX55
PITPNM2ENSG00000090975.8886.33230359.586701.3014016.5707015.22390HepG2DDX6
PITPNM2ENSG00000090975.8504.48390356.104700.502404.973904.13900HepG2DNAJC2
PITPNM2ENSG00000090975.8862.15880345.549401.3190018.7291017.28620HepG2EIF2S1
PITPNM2ENSG00000090975.8929.22680718.338200.371302.470501.36800HepG2EIF2S2
PITPNM2ENSG00000090975.8489.44460734.77070-0.586104.219601.98220HepG2EIF3H
PITPNM2ENSG00000090975.8886.08640371.865501.2526012.8542011.42750HepG2EIF4B
PITPNM2ENSG00000090975.8624.18280472.935700.400202.370301.61420HepG2EIF4G2
PITPNM2ENSG00000090975.8550.75590820.34930-0.574804.741203.35160HepG2ESF1
PITPNM2ENSG00000090975.81339.43000956.390500.485803.340902.50300HepG2FIP1L1
PITPNM2ENSG00000090975.8360.33400623.99430-0.792202.345801.41710HepG2FTO
PITPNM2ENSG00000090975.8615.33200398.277500.627502.527601.45750HepG2FUS
PITPNM2ENSG00000090975.8998.36840385.420401.3730021.6863019.94320HepG2FXR1
PITPNM2ENSG00000090975.8579.09890357.433800.696005.142104.24740HepG2G3BP1
PITPNM2ENSG00000090975.8497.09560355.961900.481702.829601.92060HepG2GEMIN5
PITPNM2ENSG00000090975.8481.78130344.407700.484202.327801.39690HepG2GNB2L1
PITPNM2ENSG00000090975.8978.29060706.046800.470403.166402.48650HepG2GPKOW
PITPNM2ENSG00000090975.8956.43660713.410600.422804.835903.92190HepG2HNRNPF
PITPNM2ENSG00000090975.8516.38220362.167900.511703.116002.37600HepG2HNRNPK
PITPNM2ENSG00000090975.8554.10550400.773600.467304.191903.45900HepG2HNRNPU
PITPNM2ENSG00000090975.8829.02460363.288001.1902010.691609.45870HepG2IGF2BP2
PITPNM2ENSG00000090975.8719.90620365.472300.977904.069802.83570HepG2KHSRP
PITPNM2ENSG00000090975.81319.04150956.143100.464102.935702.07940HepG2LARP4
PITPNM2ENSG00000090975.8500.68480337.525500.568802.549901.46230HepG2LARP7
PITPNM2ENSG00000090975.8226.35560354.24720-0.646204.269502.75840HepG2LIN28B
PITPNM2ENSG00000090975.8623.01580385.555800.692205.302404.40090HepG2MAGOH
PITPNM2ENSG00000090975.81106.77650396.789701.4798024.1278022.38300HepG2NCBP2
PITPNM2ENSG00000090975.8733.11910496.246100.562902.890402.11090HepG2NOL12
PITPNM2ENSG00000090975.8978.18060370.657101.399904.874303.40320HepG2NONO
PITPNM2ENSG00000090975.8989.78000515.023200.942406.654305.23360HepG2PABPC1
PITPNM2ENSG00000090975.8714.23250353.251501.0156011.124109.70430HepG2PABPC4
PITPNM2ENSG00000090975.8701.17750399.335200.812104.414603.67800HepG2PCBP1
PITPNM2ENSG00000090975.8566.84640376.954100.588502.301301.35290HepG2PCBP2
PITPNM2ENSG00000090975.8511.29880357.456800.516304.455303.53940HepG2PPIL4
PITPNM2ENSG00000090975.8286.22670604.56480-1.0787017.9415016.25620HepG2PRPF4
PITPNM2ENSG00000090975.8575.53380311.193100.887007.171505.94210HepG2PRPF8
PITPNM2ENSG00000090975.8974.31610406.386101.2614027.8110026.42810HepG2PTBP1
PITPNM2ENSG00000090975.8775.69960473.700500.711407.632406.70820HepG2PUF60
PITPNM2ENSG00000090975.8920.71880502.842600.8726019.3921018.10850HepG2PUM1
PITPNM2ENSG00000090975.81144.73550774.061200.564409.792108.75290HepG2PUS1
PITPNM2ENSG00000090975.8767.41090440.024600.8023010.955809.83280HepG2QKI
PITPNM2ENSG00000090975.8938.22570363.550201.3677011.9393010.55120HepG2RAVER1
PITPNM2ENSG00000090975.81515.149701031.487400.554607.736706.40490HepG2RBM15
PITPNM2ENSG00000090975.8617.18960799.33970-0.373103.068302.53050HepG2RBM22
PITPNM2ENSG00000090975.8647.66770399.389000.697402.968402.27330HepG2RBM25
PITPNM2ENSG00000090975.8819.90270452.229100.8583014.0337012.99130HepG2NELFE
PITPNM2ENSG00000090975.8662.46880421.261800.653007.517906.57460HepG2RECQL
PITPNM2ENSG00000090975.81046.75980768.536600.445603.847403.06280HepG2RPLP0
PITPNM2ENSG00000090975.8528.91530383.183500.464902.271301.30280HepG2RPS5
PITPNM2ENSG00000090975.8589.51900307.823900.937304.697603.70460HepG2RRP9
PITPNM2ENSG00000090975.8529.53450356.902500.569103.720702.99290HepG2SAFB2
PITPNM2ENSG00000090975.82046.47190861.264301.2485016.2581014.55100HepG2SF3A3
PITPNM2ENSG00000090975.8961.54960423.015001.1846026.4167024.91020HepG2SF3B4
PITPNM2ENSG00000090975.8660.77380454.181500.540806.272405.28370HepG2SLBP
PITPNM2ENSG00000090975.8632.17310416.201600.602907.748306.75670HepG2SMN1
PITPNM2ENSG00000090975.8685.60650371.860100.882504.832303.53510HepG2SMNDC1
PITPNM2ENSG00000090975.8380.70510742.05200-0.962807.143905.88330HepG2SNRNP70
PITPNM2ENSG00000090975.81417.14330902.823800.6504013.5594012.67370HepG2SRFBP1
PITPNM2ENSG00000090975.8853.32180467.696600.8674015.3626014.05560HepG2SRSF5
PITPNM2ENSG00000090975.8532.57080359.271500.567806.100705.33730HepG2SRSF9
PITPNM2ENSG00000090975.81164.65920783.863200.571109.799208.94900HepG2SSB
PITPNM2ENSG00000090975.8819.805101095.59480-0.418402.655401.39830HepG2SSRP1
PITPNM2ENSG00000090975.8800.74420531.911600.590108.069607.10050HepG2SUCLG1
PITPNM2ENSG00000090975.8565.956101076.11730-0.927105.108003.69490HepG2TBRG4
PITPNM2ENSG00000090975.8457.71110269.219100.765604.986203.70580HepG2TFIP11
PITPNM2ENSG00000090975.8491.69690364.684300.431003.063902.18880HepG2TIA1
PITPNM2ENSG00000090975.8910.07860389.400101.2246024.3407023.13520HepG2TIAL1
PITPNM2ENSG00000090975.8748.94870392.909300.9306017.0925015.85060HepG2TRIM56
PITPNM2ENSG00000090975.8600.60090462.766700.376002.310901.51910HepG2TUFM
PITPNM2ENSG00000090975.81098.19720817.995100.424902.558501.95200HepG2U2AF1
PITPNM2ENSG00000090975.81307.79910378.585901.788308.309206.51540HepG2U2AF2
PITPNM2ENSG00000090975.8989.41090489.819001.0142011.009509.29570HepG2UBE2L3
PITPNM2ENSG00000090975.8388.05460237.268800.709604.526903.55470HepG2UCHL5
PITPNM2ENSG00000090975.81046.70160763.807700.454506.280705.29810HepG2UPF1
PITPNM2ENSG00000090975.81107.44430737.429400.586609.453208.45380HepG2UTP3
PITPNM2ENSG00000090975.81826.33710840.045101.1203049.1193047.55710HepG2ZNF622
PITPNM2ENSG00000090975.8770.00310609.902500.336202.966402.38150K562AGGF1
PITPNM2ENSG00000090975.8393.68540574.38120-0.545003.483302.84060K562AQR
PITPNM2ENSG00000090975.8390.15820259.998200.585504.416503.18580K562BCLAF1
PITPNM2ENSG00000090975.8733.76890494.239300.570003.377901.76260K562CKAP4
PITPNM2ENSG00000090975.8739.50120571.614800.371403.071201.89880K562CPEB4
PITPNM2ENSG00000090975.8461.45680315.909900.546603.722802.81350K562CPSF6
PITPNM2ENSG00000090975.8317.35360197.247400.686004.522203.12350K562CSTF2
PITPNM2ENSG00000090975.81071.66710591.440200.8575012.5233011.24450K562DDX47
PITPNM2ENSG00000090975.8466.24890224.696901.053004.394703.22640K562EFTUD2
PITPNM2ENSG00000090975.8554.40830279.263600.989206.204104.65360K562EIF3A
PITPNM2ENSG00000090975.8208.31240132.192000.656002.956102.13400K562EIF3G
PITPNM2ENSG00000090975.8431.56540321.470900.424802.196001.43130K562FMR1
PITPNM2ENSG00000090975.870.09040149.57910-1.093604.636903.66890K562G3BP2
PITPNM2ENSG00000090975.8432.48400225.293400.940703.365401.77450K562GEMIN5
PITPNM2ENSG00000090975.8426.11560301.599600.498502.951002.13180K562GPKOW
PITPNM2ENSG00000090975.8553.70440407.351700.442703.247802.08280K562HNRNPA1
PITPNM2ENSG00000090975.8386.30740184.920201.062707.324005.33800K562IGF2BP2
PITPNM2ENSG00000090975.8273.89710188.072500.542202.922801.69100K562IGF2BP3
PITPNM2ENSG00000090975.8379.68200257.571900.559702.501501.61680K562KRR1
PITPNM2ENSG00000090975.8333.34170194.303400.778605.856904.61820K562MAGOH
PITPNM2ENSG00000090975.8963.24030754.482300.352303.184402.19670K562MBNL1
PITPNM2ENSG00000090975.8456.03110294.401900.631204.510003.37460K562METAP2
PITPNM2ENSG00000090975.8568.18080770.66520-0.439803.055601.86690K562MSI2
PITPNM2ENSG00000090975.8686.57530542.780900.338903.177202.38120K562NSUN2
PITPNM2ENSG00000090975.8418.17240172.874501.274305.157203.80970K562PCBP2
PITPNM2ENSG00000090975.8463.09220277.241600.740105.578604.22500K562PSIP1
PITPNM2ENSG00000090975.8314.62850188.781000.736805.418204.51600K562PTBP1
PITPNM2ENSG00000090975.8413.16100180.996301.1906013.0355011.01910K562RBM22
PITPNM2ENSG00000090975.8293.27070176.453800.732804.354902.47740K562RBM34
PITPNM2ENSG00000090975.8266.91480190.474800.486702.275901.30840K562NELFE
PITPNM2ENSG00000090975.8470.00350222.592001.078202.769101.95280K562RPS19
PITPNM2ENSG00000090975.8396.80160215.756500.878905.109303.69010K562RPS3
PITPNM2ENSG00000090975.8612.03320389.503600.651903.365801.66110K562SBDS
PITPNM2ENSG00000090975.8646.15360313.971801.041104.282602.69290K562SF1
PITPNM2ENSG00000090975.8541.95150286.892300.917607.594405.93450K562SF3B1
PITPNM2ENSG00000090975.8315.32870155.414101.020609.212507.60270K562SF3B4
PITPNM2ENSG00000090975.8771.17120382.764901.010505.051403.07660K562SFPQ
PITPNM2ENSG00000090975.8612.43250400.131100.614003.321801.38670K562SMN1
PITPNM2ENSG00000090975.8338.71410239.845400.497902.459701.50620K562SRFBP1
PITPNM2ENSG00000090975.8842.44490548.765800.618305.377804.12450K562SRPK2
PITPNM2ENSG00000090975.8342.78870185.072800.889107.017205.89950K562SRSF1
PITPNM2ENSG00000090975.8308.01820208.246300.564602.269801.33390K562SRSF4
PITPNM2ENSG00000090975.8266.99420174.798600.611003.282602.12010K562SRSF5
PITPNM2ENSG00000090975.8394.71720187.296001.075404.777903.83950K562TARDBP
PITPNM2ENSG00000090975.8339.36280180.670700.909407.386605.94510K562TIA1
PITPNM2ENSG00000090975.8384.76290266.651600.528902.754401.82050K562TIAL1
PITPNM2ENSG00000090975.8339.96440177.314800.939007.194205.22560K562TRA2A
PITPNM2ENSG00000090975.8404.83910283.360100.514603.029902.03040K562TRIM56
PITPNM2ENSG00000090975.8453.43330575.52430-0.344002.534401.84530K562UPF1
PITPNM2ENSG00000090975.8641.50600512.120100.324902.777801.93050K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PITPNM2 is not available on ENCORE database.





3 RBPs can affect the splicing of PITPNM2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPITPNM2ENSG00000090975.8chr12-1234743331234744951234732701234734191234750911234752560.353000.000780.01675includedHepG2U2AF1
SEPITPNM2ENSG00000090975.8chr12-123479347123479526123477045123477216123479935123480207-0.279000.000630.01384excludedHepG2U2AF1
SEPITPNM2ENSG00000090975.8chr12-123474333123474495123473270123473419123475091123475256-0.387000.000030.00626excludedHepG2DDX59
A3SSPITPNM2ENSG00000090975.8chr12-1234985271234986601234985271234985891235190591235192320.184000.020200.09617longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PITPNM2 is not avaliable on ENCORE database.