PHF3

General Information

Gene Name       : PHF3
Gene ID             : ENSG00000118482.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PHF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PHF3ENSG00000118482.1127.0823.3625.22ENCSR000AEF
HepG2PHF3ENSG00000118482.1120.0033.8326.91ENCSR985KAT
K562PHF3ENSG00000118482.1119.5720.8020.19ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PHF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PHF3 RNA is bound by 38 proteins.  







eCLIP assay for PHF3 is not avaliable on ENCORE database.





38 proteins are bound to PHF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr66439491564394982+3'-UTR,CDS,intron-Distal4.4823834.60502HepG2BCLAF1
chr66439403264394094+3'-UTR,CDS,intron-Distal3.326677.94188HepG2FXR2
chr66440173664401782+3'-UTR,CDS4.631965.35719HepG2GRWD1
chr66441247664412530+3'-UTR,CDS,intron-Proximal4.1438710.62845HepG2FXR2
chr66442285964422896+3'-UTR,CDS,intron-Distal3.553039.36652HepG2IGF2BP1
chr66439573864395800+3'-UTR,CDS,intron-Distal3.131966.70485HepG2GRWD1
chr66440453564404604+3'-UTR,CDS3.160224.03389K562ZNF622
chr66442187664421967+3'-UTR,CDS,intron-Distal4.155144.86533K562FXR1
chr66439575264395802+3'-UTR,CDS,intron-Distal4.7000726.33101HepG2BCLAF1
chr66439521964395353+3'-UTR,CDS,intron-Distal4.7257444.23093HepG2BCLAF1
chr66441240264412454+3'-UTR,CDS3.341836.08625HepG2FXR2
chr66441026264410301+3'-UTR,CDS4.2163516.40391HepG2BCLAF1
chr66439438964394486+3'-UTR,CDS,intron-Distal3.577439.96940K562UCHL5
chr66439575264395802+3'-UTR,CDS,intron-Distal3.5493412.80981HepG2HLTF
chr66439561164395651+3'-UTR,CDS,intron-Distal4.4588519.25711HepG2BCLAF1
chr66439417564394234+3'-UTR,CDS,intron-Distal3.048195.62262HepG2FXR2
chr66438883964388891+3'-UTR,intron-Distal3.971628.27405HepG2QKI
chr66441665564416692+3'-UTR,CDS3.071389.69611HepG2BCLAF1
chr66442301664423098+3'-UTR,CDS,intron-Distal3.381554.86973K562UCHL5
chr66440452564404559+3'-UTR,CDS3.3894511.20660HepG2BCLAF1
chr66439566864395679+3'-UTR,CDS,intron-Distal4.3224422.01248HepG2BCLAF1
chr66442389264423958+3'-UTR,intron-Distal4.016084.34279HepG2FUBP3
chr66441344164413469+3'-UTR,CDS4.1204212.80995HepG2BCLAF1
chr66442111764421161+3'-UTR,CDS4.1387115.80902HepG2BCLAF1
chr66442289664422949+3'-UTR,CDS,intron-Distal3.182497.37825HepG2IGF2BP1
chr66441342564413484+3'-UTR,CDS,intron-Proximal3.572079.11785HepG2FXR2
chr66440455964404587+3'-UTR,CDS3.6798713.68298HepG2BCLAF1
chr66441350064413562+3'-UTR,CDS,intron-Proximal3.117995.58482K562YBX3
chr66441033964410354+3'-UTR,CDS5.8100512.09921HepG2BCLAF1
chr66440822364408258+3'-UTR,CDS,intron-Proximal3.576214.19073HepG2ZNF800
chr66441904364419134+3'-UTR,CDS,intron-Proximal4.990308.98683K562LIN28B
chr66440814764408221+3'-UTR,CDS3.087305.24394HepG2PPIG
chr66439004464390062+3'-UTR,CDS,intron-Distal3.9732719.07430HepG2BCLAF1
chr66442242164422475+3'-UTR,CDS,intron-Distal4.3086812.28392HepG2HLTF
chr66439417464394269+3'-UTR,CDS,intron-Distal3.6548214.03018HepG2HLTF
chr66440811164408128+3'-UTR,CDS,intron-Proximal6.5333520.50246HepG2BCLAF1
chr66438996364390038+3'-UTR,CDS,intron-Distal3.5411823.34075HepG2BCLAF1
chr66440172764401777+3'-UTR,CDS3.595906.45305HepG2FXR2
chr66441591964415932+3'-UTR,CDS3.113906.80151HepG2BCLAF1
chr66439558464395655+3'-UTR,CDS,intron-Distal3.944278.02029HepG2GRWD1
chr66439566664395752+3'-UTR,CDS,intron-Distal3.2258719.38324HepG2HLTF
chr66442188164421912+3'-UTR,CDS,intron-Distal3.643873.88337HepG2FXR2
chr66439439264394490+3'-UTR,CDS,intron-Distal4.6341841.75330HepG2BCLAF1
chr66438881464388839+3'-UTR,intron-Distal4.477873.05187HepG2QKI
chr66439421164394260+3'-UTR,CDS,intron-Distal4.123475.48415HepG2EIF3H
chr66439480864394868+3'-UTR,CDS,intron-Distal4.4191427.57848HepG2BCLAF1
chr66442182964421863+3'-UTR,CDS,intron-Distal3.1118410.17043HepG2BCLAF1
chr66439548764395563+3'-UTR,CDS,intron-Distal3.657475.37198HepG2IGF2BP1
chr66442423864424328+3'-UTR,intron-Distal5.6027634.73712K562PUM2
chr66441604564416109+3'-UTR,CDS3.4824317.96222HepG2BCLAF1
chr66442293164423093+3'-UTR,CDS,intron-Distal3.019687.15368K562SAFB
chr66441671664416763+3'-UTR,CDS3.175083.67697K562YBX3
chr66439465864394709+3'-UTR,CDS,intron-Distal3.5279917.74666HepG2BCLAF1
chr66440834064408386+3'-UTR,CDS3.9242217.91382HepG2BCLAF1
chr66439488664394915+3'-UTR,CDS,intron-Distal4.3465918.05569HepG2BCLAF1
chr66441346964413494+3'-UTR,CDS3.649098.99805HepG2BCLAF1
chr66440815364408231+3'-UTR,CDS3.001897.95892HepG2FXR2
chr66442237064422421+3'-UTR,CDS,intron-Distal3.029998.04763HepG2HLTF
chr66442149864421566+3'-UTR,CDS,intron-Distal3.773493.55732K562SAFB
chr66440163164401721+3'-UTR,CDS4.2577133.43648HepG2BCLAF1
chr66439567064395745+3'-UTR,CDS,intron-Distal3.220589.03739K562UCHL5
chr66439498264395037+3'-UTR,CDS,intron-Distal3.6974921.45340HepG2BCLAF1
chr66440815564408205+3'-UTR,CDS3.603354.74268K562UCHL5
chr66440451964404655+3'-UTR,CDS,intron-Proximal4.8146114.80448HepG2FXR2
chr66439418764394252+3'-UTR,CDS,intron-Distal3.9217924.68765HepG2BCLAF1
chr66439451864394577+3'-UTR,CDS,intron-Distal5.3147224.61729HepG2BCLAF1
chr66439402964394145+3'-UTR,CDS,intron-Distal,intron-Proximal4.8121455.56963HepG2BCLAF1
chr66439567964395752+3'-UTR,CDS,intron-Distal5.0201962.81556HepG2BCLAF1
chr66441030164410339+3'-UTR,CDS4.2996716.40391HepG2BCLAF1
chr66442282764422921+3'-UTR,CDS,intron-Distal4.873978.11065K562IGF2BP1
chr66439566564395791+3'-UTR,CDS,intron-Distal3.6111411.28986HepG2FXR2
chr66440173864401804+3'-UTR,CDS5.3733027.36816HepG2BCLAF1
chr66440812864408146+3'-UTR,CDS4.8525017.52604HepG2BCLAF1
chr66441904364419110+3'-UTR,CDS,intron-Proximal4.0731310.77973HepG2LIN28B
chr66440811464408153+3'-UTR,CDS4.312386.32827HepG2FXR2
chr66440463664404654+3'-UTR,CDS6.7192324.73217HepG2BCLAF1
chr66439483164394890+3'-UTR,CDS,intron-Distal3.081105.18560HepG2FXR2
chr66439428664394359+3'-UTR,CDS,intron-Distal5.6988630.12860HepG2BCLAF1
chr66442347364423596+3'-UTR,CDS,intron-Distal3.1190813.17541HepG2FXR2
chr66442422264424238+3'-UTR,intron-Distal4.300105.82129K562PUM2
chr66441241164412449+3'-UTR,CDS3.5175710.50604HepG2BCLAF1
chr66441597764415988+3'-UTR,CDS3.240486.91872HepG2BCLAF1
chr66439471764394785+3'-UTR,CDS,intron-Distal5.0339229.92967HepG2BCLAF1
chr66441609664416152+3'-UTR,CDS,intron-Proximal3.092126.67352HepG2PRPF8
chr66441024764410262+3'-UTR,CDS5.9663213.02740HepG2BCLAF1
chr66439543564395568+3'-UTR,CDS,intron-Distal4.552637.73013K562IGF2BP1
chr66439438564394469+3'-UTR,CDS,intron-Distal3.201665.89932K562ZNF622
chr66441248864412529+3'-UTR,CDS3.2061114.17045HepG2BCLAF1
chr66441030064410354+3'-UTR,CDS4.523385.59408HepG2GRWD1
chr66442176964421802+3'-UTR,CDS,intron-Distal3.496869.28980HepG2BCLAF1
chr66441342564413441+3'-UTR,CDS,intron-Proximal4.4325414.68146HepG2BCLAF1
chr66442233964422414+3'-UTR,CDS,intron-Distal3.008023.46712K562SAFB2
chr66442389964423978+3'-UTR,intron-Distal3.004374.61488HepG2CSTF2
chr66439605764396120+3'-UTR,intron-Distal3.966723.48210HepG2HNRNPL
chr66441910164419135+3'-UTR,CDS3.402279.30684HepG2BCLAF1
chr66442106864421100+3'-UTR,CDS5.4539619.75354HepG2BCLAF1
chr66441354064413561+3'-UTR,CDS3.423876.91872HepG2BCLAF1
chr66439402864394085+3'-UTR,CDS,intron-Distal,intron-Proximal3.358525.19933HepG2ZNF800
chr66440458764404607+3'-UTR,CDS5.5763018.37338HepG2BCLAF1
chr66440460764404636+3'-UTR,CDS6.8905826.14473HepG2BCLAF1
chr66440814864408237+3'-UTR,CDS4.6506342.76015HepG2BCLAF1
chr66440447064404497+3'-UTR,CDS,intron-Proximal3.241306.91034HepG2BCLAF1
chr66434573164345835+5'-UTR4.650575.48791HepG2DDX3X
chr66434583064345908+5'-UTR4.202894.26442K562DDX3X
chr66434580964345862+5'-UTR3.402244.41784HepG2GRWD1
chr66434580564345892+5'-UTR4.004634.49000K562FXR2
chr66446037264460448+intron-Distal4.738756.08205HepG2MATR3
chr66444893164448989+intron-Distal4.576834.40847HepG2PTBP1
chr66436871664368769+intron-Distal3.827013.22073HepG2KHSRP
chr66436400964364061+intron-Distal4.6182111.25934K562EXOSC5
chr66438578464385879+intron-Distal4.068994.48652HepG2PTBP1
chr66436250664362573+intron-Distal4.638549.69330K562EXOSC5
chr66439819964398245+intron-Distal3.929113.19526HepG2CSTF2T
chr66436372664363823+intron-Distal4.199068.11145K562KHSRP
chr66441867164418793+intron-Distal3.065055.28491K562KHSRP
chr66443855764438636+intron-Distal4.0136711.54014HepG2HNRNPL
chr66436276164362826+intron-Distal5.187757.38793K562EXOSC5
chr66436367264363697+intron-Distal3.534544.02241K562EXOSC5
chr66436312864363169+intron-Distal5.186978.36716K562EXOSC5
chr66439176664391826+intron-Distal3.535274.57452HepG2SUGP2
chr66436826764368354+intron-Distal3.309027.77042HepG2SUGP2
chr66436261464362663+intron-Distal4.119077.61413K562EXOSC5
chr66444891964448992+intron-Distal3.664496.31999HepG2PCBP2
chr66445798864458092+intron-Distal5.149449.48778HepG2SUGP2
chr66439821164398315+intron-Distal4.249374.14518HepG2GTF2F1
chr66439775864397809+intron-Distal3.336703.61097K562ILF3
chr66436716064367214+intron-Distal3.147224.70712HepG2MATR3
chr66446020964460258+intron-Distal3.403764.57452HepG2SUGP2
chr66439819664398265+intron-Distal6.0844612.54389HepG2DDX59
chr66444866364448857+intron-Distal4.3203214.08719HepG2HNRNPL
chr66443878064438928+intron-Distal3.751015.29732HepG2KHSRP
chr66439798964398067+intron-Distal3.968106.72504HepG2ILF3
chr66436354564363599+intron-Distal4.6286416.37996K562EXOSC5
chr66445809264458155+intron-Distal4.306914.53347HepG2SUGP2
chr66434723164347311+intron-Distal4.932635.85485K562KHSRP
chr66439118064391253+intron-Distal4.506185.59955HepG2SUGP2
chr66445231464452369+intron-Distal3.738155.08575HepG2SUGP2
chr66436688764367014+intron-Distal3.223869.57214HepG2SUGP2
chr66441107464411161+intron-Distal3.289834.56724K562KHSRP
chr66436727764367308+intron-Distal3.159983.10961HepG2MATR3
chr66440865864408717+intron-Distal4.131338.08030HepG2QKI
chr66445253864452600+intron-Distal3.008764.01959HepG2SUGP2
chr66439207464392109+intron-Distal3.761063.04224HepG2SUGP2
chr66439759264397628+intron-Distal4.058794.07991K562ILF3
chr66441719064417302+intron-Distal4.195496.62875HepG2KHSRP
chr66445178164451833+intron-Distal4.589485.01910HepG2MATR3
chr66436392264363947+intron-Distal4.249733.59909K562EXOSC5
chr66441881064418920+intron-Distal3.808596.48117K562KHSRP
chr66444554264445622+intron-Distal4.5636610.08643HepG2HNRNPL
chr66446075064460801+intron-Distal3.459254.36087HepG2MATR3
chr66435870764358762+intron-Distal4.510275.85485K562KHSRP
chr66439149664391550+intron-Distal3.433733.59351HepG2MATR3
chr66439825864398285+intron-Distal4.460448.09313HepG2PCBP2
chr66436679464366855+intron-Distal3.139243.33633HepG2MATR3
chr66436648064366528+intron-Distal3.270423.39857HepG2HNRNPM
chr66443942864439484+intron-Distal3.408674.46004HepG2SUGP2
chr66441693664417009+intron-Distal4.773206.41805HepG2KHSRP
chr66443673664436817+intron-Distal4.736537.72109HepG2U2AF2
chr66436681964366861+intron-Distal4.664736.84124HepG2SUGP2
chr66441714664417248+intron-Distal3.289834.56724K562KHSRP
chr66445944564459502+intron-Distal4.618186.36848HepG2SUGP2
chr66443772064437766+intron-Distal3.741923.15816HepG2PRPF4
chr66436269664362761+intron-Distal5.013006.41304K562EXOSC5
chr66445213864452288+intron-Distal4.3160113.41910HepG2SUGP2
chr66447056664470661+intron-Distal3.942808.82644HepG2PTBP1
chr66446074764460796+intron-Distal4.021413.62366HepG2HNRNPM
chr66439215164392196+intron-Distal4.111274.03915HepG2SUGP2
chr66440991264410095+intron-Distal5.551799.18298HepG2KHSRP
chr66444021864440250+intron-Distal4.243954.61447HepG2SUGP2
chr66443665964436720+intron-Distal4.098113.95921HepG2U2AF2
chr66436815664368327+intron-Distal3.020594.12287K562MATR3
chr66440979464409860+intron-Distal3.651573.95921HepG2U2AF2
chr66437303164373091+intron-Distal4.676393.83958HepG2QKI
chr66435807164358141+intron-Distal4.3910213.15655K562KHSRP
chr66439824764398320+intron-Distal5.184256.53303HepG2ILF3
chr66437197164372024+intron-Distal4.924885.08739K562XRCC6
chr66440999164410116+intron-Distal4.183139.40001K562KHSRP
chr66443847364438557+intron-Distal5.2907119.38194HepG2HNRNPL
chr66440852864408662+intron-Distal,intron-Proximal4.894458.72817K562KHSRP
chr66439819664398247+intron-Distal3.523156.71241HepG2ILF3
chr66436663664366681+intron-Distal3.643825.79523HepG2SUGP2
chr66439046064390635+intron-Distal4.128874.31512K562KHSRP
chr66437432264374464+intron-Distal4.435624.00239HepG2KHSRP
chr66439110264391178+intron-Distal4.623054.66899HepG2HNRNPM
chr66445245264452492+intron-Distal4.146474.28663HepG2SUGP2
chr66444008664440150+intron-Distal3.530839.78248HepG2SUGP2
chr66444532964445418+intron-Distal3.382626.99503HepG2PTBP1
chr66439821364398292+intron-Distal4.130053.59342K562CSTF2T
chr66435225164352407+intron-Distal3.577425.83959K562KHSRP
chr66441777664417833+intron-Distal3.107573.63132HepG2HNRNPC
chr66435821964358282+intron-Distal3.092264.65228HepG2KHSRP
chr66445178564451861+intron-Distal3.613128.23930HepG2SUGP2
chr66441109464411163+intron-Distal3.179283.66299HepG2KHSRP
chr66441712464417221+intron-Distal3.586374.18806HepG2U2AF2
chr66439820664398258+intron-Distal6.8869628.56970HepG2PCBP2
chr66436234664362377+intron-Distal4.607845.12361K562EXOSC5
chr66439755064397651+intron-Distal4.031777.08005HepG2QKI
chr66436690564367017+intron-Distal3.518477.12108HepG2MATR3
chr66436415664364185+intron-Distal5.053577.06230K562EXOSC5
chr66441866964418715+intron-Distal4.230684.56270HepG2KHSRP
chr66447383864473962+intron-Distal4.672285.76537HepG2PCBP2
chr66446075864460815+intron-Distal4.450314.86548HepG2SUGP2
chr66439821764398297+intron-Distal3.970675.59712K562ILF3
chr66439107964391149+intron-Distal3.641835.78794HepG2SUGP2
chr66440419064404243+intron-Distal3.471925.36861HepG2U2AF2
chr66439766364397758+intron-Distal3.8722513.53423K562ILF3
chr66437822864378294+intron-Distal4.243223.61897HepG2HNRNPC
chr66445801664458064+intron-Distal4.196983.96879HepG2MATR3
chr66443949064439538+intron-Distal4.926516.84124HepG2SUGP2
chr66445163164451664+intron-Distal3.920213.79098HepG2SUGP2
chr66446037264460494+intron-Distal4.1044611.72212HepG2SUGP2
chr66443125364431335+intron-Distal3.581037.41200HepG2HNRNPL
chr66441688264416936+intron-Distal3.193683.53952HepG2KHSRP
chr66436831864368364+intron-Distal4.353493.78432HepG2MATR3
chr66436328264363345+intron-Distal3.687315.85289K562EXOSC5
chr66445936864459413+intron-Distal3.299463.91859HepG2SUGP2
chr66443956564439611+intron-Distal3.403764.14346HepG2SUGP2
chr66438571164385767+intron-Distal3.486983.30286HepG2PTBP1
chr66436335764363429+intron-Distal4.029819.69970K562EXOSC5
chr66443962064439675+intron-Distal5.122299.75642HepG2SUGP2
chr66442727164427342+intron-Distal4.6141611.50600HepG2QKI
chr66439736464397425+intron-Distal3.614315.59712K562ILF3
chr66436308464363112+intron-Distal3.583024.91037K562EXOSC5
chr66445032364450399+intron-Distal4.520053.77802HepG2U2AF2
chr66436364364363726+intron-Distal3.266496.24191K562KHSRP
chr66446054464460590+intron-Distal4.239324.10336HepG2SUGP2
chr66441883164418887+intron-Distal3.195493.78824HepG2KHSRP
chr66435789564357942+intron-Distal4.595035.60990HepG2KHSRP
chr66445211964452199+intron-Distal4.814493.62238HepG2MATR3
chr66440806464408101+intron-Proximal4.512223.95187HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PHF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PHF3 is not available on ENCORE database.

  • 85 RBPs can affect the levels of PHF3.  








The Knockdown/knockout RNA-Seq assay for PHF3 is not available on ENCORE database.





85 RBPs can affect the gene expression of PHF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PHF3ENSG00000118482.72675.312303278.66570-0.293405.296504.50830HepG2ACO1
PHF3ENSG00000118482.73433.619604687.62100-0.449103.657803.05770HepG2AKAP1
PHF3ENSG00000118482.73856.181004712.92710-0.289505.115404.22830HepG2AUH
PHF3ENSG00000118482.71767.954902519.70460-0.511203.903002.78960HepG2BCCIP
PHF3ENSG00000118482.73991.203305325.89220-0.416204.872304.10690HepG2BOP1
PHF3ENSG00000118482.72800.840503277.96250-0.226903.770203.01640HepG2CKAP4
PHF3ENSG00000118482.72307.715103645.28780-0.659604.702403.70030HepG2CNOT7
PHF3ENSG00000118482.72340.970602887.83440-0.302904.038302.80560HepG2YBX3
PHF3ENSG00000118482.72767.539403447.10100-0.316805.066404.24450HepG2CELF1
PHF3ENSG00000118482.73267.139803706.85200-0.182203.073502.29870HepG2DAZAP1
PHF3ENSG00000118482.72232.593602891.78940-0.373205.619104.01950HepG2DDX1
PHF3ENSG00000118482.71088.503302839.51870-1.3833040.1583038.03000HepG2DDX21
PHF3ENSG00000118482.73333.794802778.757900.262602.498001.63330HepG2DDX24
PHF3ENSG00000118482.73221.553804490.55570-0.479104.720603.92150HepG2DDX3X
PHF3ENSG00000118482.71697.783002477.32610-0.545104.489003.52840HepG2DDX55
PHF3ENSG00000118482.73092.045503857.08140-0.318902.090001.54640HepG2DDX6
PHF3ENSG00000118482.72217.362202734.90420-0.302602.668401.70280HepG2DHX30
PHF3ENSG00000118482.72288.241502835.53190-0.309404.213103.36120HepG2DNAJC21
PHF3ENSG00000118482.72060.239402810.64600-0.4481011.9177010.66640HepG2DNAJC2
PHF3ENSG00000118482.72062.434802771.51420-0.426303.991402.65360HepG2EFTUD2
PHF3ENSG00000118482.72836.995604098.30080-0.530704.870404.02610HepG2EIF4A3
PHF3ENSG00000118482.73468.997705411.17260-0.6414022.0614020.64350HepG2ETF1
PHF3ENSG00000118482.72227.291103203.85050-0.524507.775306.38260HepG2EWSR1
PHF3ENSG00000118482.71953.012602411.83840-0.304403.153501.89250HepG2FAM120A
PHF3ENSG00000118482.73158.402104134.43440-0.388503.446602.67970HepG2FXR1
PHF3ENSG00000118482.72407.069303184.27380-0.403704.452303.58760HepG2HNRNPC
PHF3ENSG00000118482.73014.753803883.17980-0.365203.494702.71440HepG2HNRNPK
PHF3ENSG00000118482.72645.004703376.77130-0.352409.073607.92040HepG2HNRNPL
PHF3ENSG00000118482.74317.956705289.50610-0.292802.311301.73020HepG2HNRNPLL
PHF3ENSG00000118482.72799.011503417.29910-0.287902.653601.71970HepG2HNRNPM
PHF3ENSG00000118482.72612.565103163.21750-0.275904.332003.58750HepG2HNRNPU
PHF3ENSG00000118482.72997.420303898.91090-0.379303.340702.60480HepG2IGF2BP2
PHF3ENSG00000118482.75240.951207173.26070-0.452803.516602.57870HepG2LARP4
PHF3ENSG00000118482.73324.743704159.11740-0.323002.138701.58010HepG2MATR3
PHF3ENSG00000118482.72681.473704008.75140-0.580109.331707.92870HepG2MSI2
PHF3ENSG00000118482.72858.929104257.16460-0.574406.183705.25300HepG2NCBP2
PHF3ENSG00000118482.75844.496204690.091200.317402.921402.15220HepG2NSUN2
PHF3ENSG00000118482.72710.722903788.87980-0.4831011.6646010.55690HepG2PCBP1
PHF3ENSG00000118482.74598.299703847.282300.257203.800302.90690HepG2PRPF4
PHF3ENSG00000118482.71504.806601911.42210-0.345102.190201.46850HepG2PRPF8
PHF3ENSG00000118482.73251.128003855.51870-0.246002.829302.27680HepG2PTBP1
PHF3ENSG00000118482.73011.384703508.66150-0.220501.872601.36860HepG2PUF60
PHF3ENSG00000118482.72718.859503339.53510-0.296605.468304.65550HepG2PUS1
PHF3ENSG00000118482.73457.937704522.71780-0.387307.383706.63270HepG2RBM22
PHF3ENSG00000118482.73610.589804290.66270-0.249003.156002.58560HepG2NELFE
PHF3ENSG00000118482.72231.211402625.92490-0.235001.870201.35610HepG2RPS19
PHF3ENSG00000118482.72306.664403064.68180-0.409903.623102.71120HepG2RPS2
PHF3ENSG00000118482.72760.376303661.00470-0.407402.569701.79830HepG2RPS3A
PHF3ENSG00000118482.72454.246102816.95520-0.198902.653202.01950HepG2SAFB2
PHF3ENSG00000118482.72665.446803284.99540-0.301506.692505.76050HepG2SMN1
PHF3ENSG00000118482.76277.753405108.205900.297306.440405.76290HepG2SRFBP1
PHF3ENSG00000118482.74599.710004189.625000.134601.743601.34370HepG2SRSF1
PHF3ENSG00000118482.74397.082003408.604000.367308.630407.75130HepG2SRSF9
PHF3ENSG00000118482.74731.724603766.188000.329205.234304.50440HepG2TAF15
PHF3ENSG00000118482.74311.150805155.38420-0.258002.112901.46760HepG2TARDBP
PHF3ENSG00000118482.72200.299803073.46650-0.482207.715606.95780HepG2TIAL1
PHF3ENSG00000118482.72144.579803101.14550-0.5321013.7821012.65930HepG2TRIM56
PHF3ENSG00000118482.71137.064901456.95970-0.357602.338201.63920HepG2UCHL5
PHF3ENSG00000118482.73718.725904379.73300-0.236003.880303.07370HepG2UPF1
PHF3ENSG00000118482.72463.342203279.20340-0.412702.475201.44680HepG2XPO5
PHF3ENSG00000118482.71844.216002427.74540-0.396602.935702.18880HepG2XRN2
PHF3ENSG00000118482.74400.452103796.800800.212803.640002.88710HepG2ZC3H8
PHF3ENSG00000118482.74121.474304816.85880-0.224904.550503.89410HepG2ZNF622
PHF3ENSG00000118482.74197.179105271.16670-0.328705.714404.07470K562CPEB4
PHF3ENSG00000118482.73764.427304387.40130-0.220902.003201.32750K562CPSF6
PHF3ENSG00000118482.74509.704705454.05330-0.274304.672103.85570K562DDX47
PHF3ENSG00000118482.71909.569002529.31430-0.405505.346803.30980K562DDX6
PHF3ENSG00000118482.72340.597903015.77270-0.365705.758904.77780K562EIF2S2
PHF3ENSG00000118482.71787.776602344.18590-0.390905.619304.50060K562EIF3G
PHF3ENSG00000118482.72560.725504115.17360-0.684403.889202.87360K562FIP1L1
PHF3ENSG00000118482.73733.823604464.15050-0.257702.051301.31120K562FMR1
PHF3ENSG00000118482.72253.432902710.54960-0.266502.161701.61500K562FXR1
PHF3ENSG00000118482.73922.188802806.630600.482703.573502.74500K562G3BP2
PHF3ENSG00000118482.73478.823604188.85810-0.268002.273201.55300K562GPKOW
PHF3ENSG00000118482.72384.275404018.88270-0.7532014.2020012.46490K562GRSF1
PHF3ENSG00000118482.72071.612802452.76670-0.243701.948001.43590K562HNRNPC
PHF3ENSG00000118482.73638.251804929.06490-0.438106.004104.38700K562HNRNPL
PHF3ENSG00000118482.73503.980105579.79070-0.671203.618102.71250K562HSPD1
PHF3ENSG00000118482.72769.312503423.66250-0.306002.715301.53670K562IGF2BP3
PHF3ENSG00000118482.72737.669804088.80580-0.578709.312307.64070K562METAP2
PHF3ENSG00000118482.73159.507903702.61160-0.228803.539402.63090K562MTPAP
PHF3ENSG00000118482.72579.029503148.21130-0.287702.567901.62600K562PCBP2
PHF3ENSG00000118482.72919.757604671.03320-0.677903.929402.92730K562PPIG
PHF3ENSG00000118482.71484.952602072.09120-0.480704.770103.78910K562PRPF8
PHF3ENSG00000118482.71723.402102199.11790-0.351703.057802.10100K562PSIP1
PHF3ENSG00000118482.72368.651903437.40810-0.537308.740107.60150K562PTBP1
PHF3ENSG00000118482.74938.488205958.65990-0.270902.687201.88200K562PUF60
PHF3ENSG00000118482.75291.860106209.94890-0.230803.056402.05050K562PUM2
PHF3ENSG00000118482.72494.058003296.60700-0.402504.238003.17070K562RBM22
PHF3ENSG00000118482.72714.776503469.02460-0.353703.057201.90200K562NELFE
PHF3ENSG00000118482.71429.739802110.73610-0.562004.895403.80800K562RPS19
PHF3ENSG00000118482.72606.341303463.32510-0.410103.815202.61580K562RPS3
PHF3ENSG00000118482.73072.749504059.35390-0.401707.322106.04550K562SF3A3
PHF3ENSG00000118482.72479.680803182.14630-0.359803.415002.22720K562SRSF5
PHF3ENSG00000118482.73852.638703012.683900.354704.700202.68920K562SRSF9
PHF3ENSG00000118482.72460.236903410.59100-0.471203.586002.77670K562TARDBP
PHF3ENSG00000118482.72444.050103289.83700-0.428705.827204.57190K562TIA1
PHF3ENSG00000118482.73895.291304362.18770-0.163302.147801.50860K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PHF3 is not available on ENCORE database.





20 RBPs can affect the splicing of PHF3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPHF3ENSG00000118482.7chr6+643564316435670064345740643460556438990064390062-0.310000.000180.00515excludedK562SRSF1
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.100000.002800.04737excludedK562SF3B4
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.207000.000000.00000excludedHepG2U2AF1
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.115000.000780.08951excludedHepG2HNRNPM
SEPHF3ENSG00000118482.7chr6+643564316435670064346015643460556438990064390062-0.330000.002340.05327excludedHepG2HNRNPK
SEPHF3ENSG00000118482.7chr6+6438872864388921643564316435670064389900643900620.196000.000220.02472includedHepG2QKI
SEPHF3ENSG00000118482.7chr6+6438872864388921643564316435670064389900643900620.115000.002410.02941includedHepG2U2AF2
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.247000.000000.00001excludedHepG2U2AF2
SEPHF3ENSG00000118482.7chr6+644166186441676664415918644161146441904664419136-0.102000.000020.00040excludedK562AQR
SEPHF3ENSG00000118482.7chr6+643887286438892164356431643567006438990064390062-0.097000.000000.00013excludedK562PUS1
SEPHF3ENSG00000118482.7chr6+6438872864388921643564316435670064389900643900620.285000.000000.00019includedHepG2NCBP2
SEPHF3ENSG00000118482.7chr6+6435643164356700643460156434605564389900643900620.232000.000870.04124includedHepG2SFPQ
SEPHF3ENSG00000118482.7chr6+643564316435670064345740643460556438990064390062-0.364000.000150.03045excludedHepG2HNRNPA1
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.189000.000000.00021excludedK562U2AF1
SEPHF3ENSG00000118482.7chr6+6438872864388921643564316435670064389900643900620.256000.000030.00146includedHepG2SRSF1
SEPHF3ENSG00000118482.7chr6+643564316435670064345740643460556438990064390062-0.492000.000000.00000excludedHepG2SRSF1
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.114000.002430.05112excludedHepG2SRSF1
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.187000.000380.03244excludedHepG2TIAL1
SEPHF3ENSG00000118482.7chr6+643564316435670064345740643460556438990064390062-0.314000.000150.01000excludedHepG2SF3B4
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.181000.000020.00167excludedHepG2SF3B4
SEPHF3ENSG00000118482.7chr6+643940296439581264389900643900626440162664401933-0.165000.000030.00101excludedK562U2AF2
SEPHF3ENSG00000118482.7chr6+643887286438892164356431643567006438990064390062-0.118000.000210.03710excludedK562ZC3H8
SEPHF3ENSG00000118482.7chr6+6435643164356700643457406434605564389900643900620.323000.005530.07515includedK562HNRNPC
A3SSPHF3ENSG00000118482.7chr6+6441238464412529644123976441252964410185644103560.146000.000000.00000longerK562AQR
A3SSPHF3ENSG00000118482.7chr6+6441018564410356644102396441035664408338644084950.157000.000200.00160longerK562AQR
A3SSPHF3ENSG00000118482.7chr6+6441659664416766644166186441676664415881644161140.199000.000000.00000longerK562AQR
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.160000.000010.000511includedHepG2U2AF1
MXEPHF3ENSG00000118482.7chr6+6435643164356700643887286438892164346015643460556438990064390062-0.245000.000380.010712includedHepG2SRSF1
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.245000.000000.000361includedK562RBM15
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.260000.000900.018261includedK562U2AF1
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.369000.000000.000001includedK562PUS1
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.194000.000010.000741includedK562AGGF1
MXEPHF3ENSG00000118482.7chr6+6435643164356700643887286438892164346015643460556438990064390062-0.201000.000350.072092includedK562HNRNPA1
MXEPHF3ENSG00000118482.7chr6+64415888644161146441661864416766644134256441356164419046644191360.084000.000010.000151includedK562AQR
MXEPHF3ENSG00000118482.7chr6+64415881644161146441661864416766644134256441356164419046644191100.084000.000010.000151includedK562AQR
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.146000.000540.035581includedK562UTP18
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.173000.010510.095341includedK562U2AF2
MXEPHF3ENSG00000118482.7chr6+64394029643958126440447064404654643899006439006264408112644082570.182000.000170.036731includedK562ZC3H8
MXEPHF3ENSG00000118482.7chr6+6438990064390062643940296439581264356431643567006440162664401933-0.111000.000430.009952includedHepG2HNRNPUL1
MXEPHF3ENSG00000118482.7chr6+6435643164356700643887286438892164346015643460556438990064390062-0.248000.000080.004662includedHepG2NCBP2
MXEPHF3ENSG00000118482.7chr6+64401626644019336440447064404654643899006439006264408112644082570.199000.000190.005161includedK562SF3B4
MXEPHF3ENSG00000118482.7chr6+64389900643900626439402964395812643564316435670064401626644019330.154000.000470.023311includedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PHF3 is not avaliable on ENCORE database.