PDCD6

General Information

Gene Name       : PDCD6
Gene ID             : ENSG00000249915.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDCD6)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDCD6ENSG00000249915.761.3873.4167.39ENCSR000AEF
HepG2PDCD6ENSG00000249915.7150.2892.61121.44ENCSR985KAT
K562PDCD6ENSG00000249915.7139.07133.90136.49ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDCD6 is not avaliable on ENCORE database.



Proteins bound to RNA

  • PDCD6 RNA is bound by 50 proteins.  







eCLIP assay for PDCD6 is not avaliable on ENCORE database.





50 proteins are bound to PDCD6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5314759314863+3'-UTR,intron-Distal7.02834400.00000K562PUM2
chr5314760314814+3'-UTR,intron-Distal4.460924.41043K562APOBEC3C
chr5306842306911+3'-UTR,CDS,intron-Distal,intron-Proximal4.257317.89388HepG2PRPF8
chr5276630276755+3'-UTR,intron-Distal4.9353316.24874K562QKI
chr5314697314735+3'-UTR,intron-Distal5.4536520.03557K562PUM2
chr5306677306748+3'-UTR,CDS,intron-Distal,intron-Proximal4.8605913.38267K562AQR
chr5314960315069+3'-UTR,intron-Distal,polyA_signal4.1617111.43847K562PABPC4
chr5311327311415+3'-UTR,CDS,intron-Distal,intron-Proximal3.506436.86323K562SF3B4
chr5311514311533+3'-UTR,CDS,intron-Distal,intron-Proximal3.807385.34337K562AQR
chr5306766306884+3'-UTR,CDS,intron-Distal,intron-Proximal3.284403.63043HepG2GRWD1
chr5311533311592+3'-UTR,intron-Distal,intron-Proximal4.467669.03062K562AQR
chr5314732314881+3'-UTR,intron-Distal3.149828.77222K562ZC3H11A
chr5314963315069+3'-UTR,intron-Distal,polyA_signal3.8001811.31960K562ZC3H11A
chr5314735314759+3'-UTR,intron-Distal8.03936400.00000K562PUM2
chr5314920315004+3'-UTR,intron-Distal3.197704.06631HepG2ZC3H11A
chr5314686314884+3'-UTR,intron-Distal3.043966.62445K562NOLC1
chr5314796314899+3'-UTR,intron-Distal5.3631913.73579HepG2SUB1
chr5306675306772+3'-UTR,CDS,intron-Distal,intron-Proximal3.466015.85200K562BUD13
chr5314529314610+3'-UTR,CDS,intron-Distal,intron-Proximal3.070784.39623HepG2PPIG
chr5314911315039+3'-UTR,intron-Distal3.821444.40261K562APOBEC3C
chr5311351311423+3'-UTR,CDS,intron-Distal,intron-Proximal3.610695.14100HepG2SF3B4
chr5314741314796+3'-UTR,intron-Distal5.978128.21523HepG2SUB1
chr5315024315084+3'-UTR,intron-Distal,polyA_signal,polyA_site4.344093.00640HepG2ZC3H11A
chr5314775314849+3'-UTR,intron-Distal3.2192411.98097K562DDX6
chr5311463311585+3'-UTR,CDS,intron-Distal,intron-Proximal4.0770010.64040HepG2PRPF8
chr5314783314875+3'-UTR,intron-Distal3.3933512.87392K562PABPC4
chr5311349311422+3'-UTR,CDS,intron-Distal,intron-Proximal4.640207.43709HepG2SF3A3
chr5314609314660+3'-UTR,CDS,intron-Distal3.451214.34553K562DDX6
chr5271782271845+5'-UTR,CDS4.4417420.19728K562DDX3X
chr5271771271843+5'-UTR,CDS4.215759.88902HepG2DDX3X
chr5271876271887+CDS3.309729.92812K562YBX3
chr5271845271899+CDS4.8547324.91923K562DDX3X
chr5271843271932+CDS4.8815411.11007HepG2DDX3X
chr5271899271937+CDS,intron-Proximal3.9601713.99961K562DDX3X
chr5271918271989+CDS,intron-Proximal4.819503.70131HepG2PRPF8
chr5285739285771+intron-Distal4.746714.97153HepG2EXOSC5
chr5292821292910+intron-Distal3.594593.95301K562ZNF622
chr5302897302946+intron-Distal4.478055.60464K562CSTF2T
chr5303075303109+intron-Distal4.946714.67055K562EIF4G2
chr5317786317859+intron-Distal3.408793.27222HepG2CSTF2T
chr5302633302680+intron-Distal5.0716915.32498K562EIF4G2
chr5286982287120+intron-Distal6.0955010.15112HepG2EXOSC5
chr5284176284256+intron-Distal7.0934836.18271K562EXOSC5
chr5278929279077+intron-Distal5.268168.29787HepG2PRPF4
chr5286654286706+intron-Distal5.1378615.99660K562HNRNPM
chr5284346284418+intron-Distal5.2594016.50410K562HNRNPM
chr5282482282560+intron-Distal3.368763.09170K562DHX30
chr5302889302942+intron-Distal3.909683.07008K562NONO
chr5283684283733+intron-Distal5.1550415.14615K562EXOSC5
chr5284418284520+intron-Distal6.5610326.16880K562HNRNPM
chr5286266286375+intron-Distal5.6248538.47438K562HNRNPM
chr5295130295240+intron-Distal5.6226610.97903K562YWHAG
chr5286736286816+intron-Distal4.6785711.18312HepG2HNRNPM
chr5297401297440+intron-Distal3.123913.01707K562SLTM
chr5286488286533+intron-Distal3.865873.43867K562CSTF2T
chr5307587307632+intron-Distal3.202773.41462K562EWSR1
chr5294122294157+intron-Distal4.157823.01428K562UCHL5
chr5309583309630+intron-Distal4.091068.40323K562NONO
chr5295108295226+intron-Distal6.3763738.76281K562SLTM
chr5282471282526+intron-Distal4.511867.17878HepG2HNRNPM
chr5285768285833+intron-Distal4.502844.45763HepG2BCCIP
chr5310455310551+intron-Distal3.469725.47574K562TARDBP
chr5345699345801+intron-Distal4.320938.89436K562CSTF2T
chr5317049317088+intron-Distal3.866353.19526HepG2CSTF2T
chr5284354284400+intron-Distal4.348073.79821HepG2BCCIP
chr5293060293108+intron-Distal4.057935.71515K562SLTM
chr5286553286648+intron-Distal5.5362818.35910HepG2HNRNPM
chr5283838283902+intron-Distal5.8885326.02293K562EXOSC5
chr5283178283230+intron-Distal5.3284710.26991K562HNRNPM
chr5286182286220+intron-Distal5.5578212.88467K562HNRNPM
chr5283346283391+intron-Distal4.749107.23369HepG2BCCIP
chr5310215310351+intron-Distal3.983753.23171K562FUS
chr5283424283502+intron-Distal6.0954117.11433K562HNRNPM
chr5282868282941+intron-Distal4.9550022.43932K562HNRNPM
chr5281802281805+intron-Distal5.034546.41216K562EXOSC5
chr5296067296162+intron-Distal4.4544212.24419K562SLTM
chr5286069286183+intron-Distal5.3001613.39607HepG2EXOSC5
chr5284464284522+intron-Distal5.0473922.20556K562EXOSC5
chr5286344286410+intron-Distal3.306923.58549K562NONO
chr5295130295182+intron-Distal4.770074.42137HepG2HLTF
chr5307575307650+intron-Distal5.475928.04355K562EIF4G2
chr5283345283390+intron-Distal4.3887413.37617K562EXOSC5
chr5283195283224+intron-Distal4.579155.68226HepG2HNRNPM
chr5287194287232+intron-Distal3.370225.45871HepG2HNRNPM
chr5286450286484+intron-Distal3.380193.48567K562SLTM
chr5295119295218+intron-Distal5.9802715.14352K562UCHL5
chr5307708307745+intron-Distal4.777913.20137K562DDX52
chr5295124295223+intron-Distal4.745378.50927HepG2SLTM
chr5292999293060+intron-Distal3.929724.78817K562SLTM
chr5292685292768+intron-Distal4.995256.94273K562YWHAG
chr5296623296668+intron-Distal3.858665.66214K562SLTM
chr5307553307632+intron-Distal4.2358813.96281K562NONO
chr5273359273425+intron-Distal3.999975.80877K562EXOSC5
chr5302206302257+intron-Distal3.458363.92720K562TARDBP
chr5284537284587+intron-Distal5.7675114.24378K562HNRNPM
chr5307958308020+intron-Distal3.409343.59395HepG2PTBP1
chr5310454310536+intron-Distal3.752168.83057K562NONO
chr5293132293309+intron-Distal3.126536.55976K562RBM15
chr5345715345822+intron-Distal5.985548.64867K562FAM120A
chr5292756292921+intron-Distal4.182843.89395K562GRWD1
chr5284657284696+intron-Distal5.9037914.98801K562EXOSC5
chr5279514279599+intron-Distal3.613735.08839HepG2CSTF2T
chr5281805281888+intron-Distal5.205377.88694HepG2BCCIP
chr5283690283778+intron-Distal5.2182518.89264K562HNRNPM
chr5296073296150+intron-Distal4.021918.88619K562UCHL5
chr5296453296507+intron-Distal5.067547.13440K562SLTM
chr5282441282522+intron-Distal6.1369318.75530K562HNRNPM
chr5309519309563+intron-Distal3.969093.59342K562CSTF2T
chr5287085287157+intron-Distal6.0214113.41470HepG2HNRNPM
chr5278971279019+intron-Distal4.158834.19345HepG2CSTF2T
chr5296260296288+intron-Distal3.881553.01428K562UCHL5
chr5286648286736+intron-Distal5.2476715.47090HepG2HNRNPM
chr5282994283090+intron-Distal4.9298213.92717HepG2HNRNPM
chr5284008284092+intron-Distal5.9534228.68729K562EXOSC5
chr5273261273369+intron-Distal3.645743.41858K562FUS
chr5286384286456+intron-Distal4.350896.98528HepG2HNRNPM
chr5279311279418+intron-Distal3.272116.83858K562GTF2F1
chr5296621296683+intron-Distal4.040586.46803K562UCHL5
chr5299280299384+intron-Distal5.177245.41835HepG2DDX59
chr5287306287385+intron-Distal4.326446.98528HepG2HNRNPM
chr5309699309786+intron-Distal4.915926.40474K562GEMIN5
chr5302413302462+intron-Distal6.3083115.93547K562EIF4G2
chr5344862344997+intron-Distal6.4869310.49187K562EIF4G2
chr5302205302259+intron-Distal4.9090520.12814K562EIF4G2
chr5284109284167+intron-Distal4.5085220.03866K562EXOSC5
chr5284177284240+intron-Distal3.6114411.04824K562HNRNPM
chr5285793285838+intron-Distal5.6873612.88467K562HNRNPM
chr5287089287144+intron-Distal5.2012718.33903K562HNRNPM
chr5296808296859+intron-Distal3.785225.57819K562UCHL5
chr5301920301950+intron-Distal4.061038.30477K562EIF4G2
chr5282219282277+intron-Distal5.333726.95517HepG2EXOSC5
chr5272046272118+intron-Distal4.116733.23168HepG2DDX59
chr5285329285355+intron-Distal4.229417.31365K562EXOSC5
chr5293148293263+intron-Distal4.844036.65708K562YWHAG
chr5292799292959+intron-Distal5.6619821.23602K562SLTM
chr5316906316947+intron-Distal4.073874.19345HepG2CSTF2T
chr5283975284009+intron-Distal3.942677.28460K562HNRNPM
chr5284317284401+intron-Distal4.8305712.10978HepG2HNRNPM
chr5307969308036+intron-Distal3.310857.75493K562NONO
chr5283036283120+intron-Distal6.8924329.42937K562EXOSC5
chr5286767286891+intron-Distal5.8378638.11928K562HNRNPM
chr5282464282554+intron-Distal5.5714132.71031K562EXOSC5
chr5286514286565+intron-Distal6.8720329.89024K562HNRNPM
chr5285485285512+intron-Distal4.568458.51158K562EXOSC5
chr5309235309286+intron-Distal3.897453.07980HepG2HNRNPM
chr5281412281437+intron-Distal4.6517711.25934K562EXOSC5
chr5282879282924+intron-Distal4.711357.18647HepG2BCCIP
chr5286139286213+intron-Distal3.283894.46348K562DDX52
chr5282989283097+intron-Distal4.9251814.95374HepG2BCCIP
chr5301881301920+intron-Distal4.2747410.14570K562EIF4G2
chr5283538283575+intron-Distal5.9483413.98677K562EXOSC5
chr5278989279058+intron-Distal4.179414.41148HepG2GTF2F1
chr5298917299007+intron-Distal4.831826.89468HepG2RBFOX2
chr5282235282311+intron-Distal4.572955.80264HepG2BCCIP
chr5284205284236+intron-Distal4.073853.56080HepG2BCCIP
chr5282942283028+intron-Distal5.4061121.71964K562HNRNPM
chr5306945307061+intron-Distal,intron-Proximal4.959685.86222K562NONO
chr5282674282711+intron-Distal4.251225.14871HepG2BCCIP
chr5281510281551+intron-Distal4.105603.48006HepG2BCCIP
chr5292803292923+intron-Distal6.3660520.79576K562UCHL5
chr5310651310687+intron-Distal3.337123.77567K562NONO
chr5310323310384+intron-Distal3.956866.84078K562NONO
chr5297141297216+intron-Distal4.182046.47842K562SLTM
chr5286891286937+intron-Distal4.9833620.15546K562HNRNPM
chr5318640318723+intron-Distal3.401896.36668HepG2CSTF2T
chr5345092345149+intron-Distal5.790956.58769K562EIF4G2
chr5286816286878+intron-Distal3.221687.27504HepG2HNRNPM
chr5307958308041+intron-Distal3.063484.37052K562DDX52
chr5284024284069+intron-Distal5.4703612.32763K562HNRNPM
chr5282371282541+intron-Distal7.4472629.99599HepG2EXOSC5
chr5296059296134+intron-Distal3.479284.90935K562SAFB2
chr5286134286221+intron-Distal5.8679529.35352K562EXOSC5
chr5295116295271+intron-Distal4.2619210.44378K562SAFB2
chr5286452286519+intron-Distal5.1351020.25171K562EXOSC5
chr5284528284603+intron-Distal4.202966.64193HepG2HNRNPM
chr5301540301655+intron-Distal3.231844.92335K562NONO
chr5285512285545+intron-Distal4.369479.10527K562EXOSC5
chr5309307309421+intron-Distal3.851443.80037K562FUS
chr5298931299053+intron-Distal4.061603.06617K562HNRNPK
chr5302412302469+intron-Distal3.673063.06143HepG2IGF2BP1
chr5302814302849+intron-Distal3.017053.17504K562CSTF2T
chr5302220302267+intron-Distal3.266563.62708K562CSTF2T
chr5281469281485+intron-Distal4.132613.86368HepG2HNRNPM
chr5286796286897+intron-Distal3.200344.51225HepG2BCCIP
chr5283028283096+intron-Distal4.5519716.32253K562HNRNPM
chr5308143308216+intron-Distal3.240144.91491K562SLTM
chr5294959295013+intron-Distal3.791687.34139K562SLTM
chr5286261286377+intron-Distal3.515444.72516HepG2BCCIP
chr5282668282705+intron-Distal4.279828.54225K562HNRNPM
chr5303193303287+intron-Distal3.668484.35339HepG2CSTF2T
chr5309475309563+intron-Distal3.685563.27944K562PTBP1
chr5286145286182+intron-Distal5.3481611.33028K562HNRNPM
chr5286375286443+intron-Distal6.6195725.89747K562HNRNPM
chr5318186318259+intron-Distal4.094053.82414HepG2HNRNPK
chr5281389281433+intron-Distal3.668375.11047HepG2BCCIP
chr5310100310157+intron-Distal3.140974.98988K562NONO
chr5284352284443+intron-Distal5.549908.39251HepG2EXOSC5
chr5317592317657+intron-Distal4.069766.10842HepG2CSTF2T
chr5286320286387+intron-Distal4.7313718.63259K562EXOSC5
chr5299254299377+intron-Distal5.517117.34252HepG2PCBP2
chr5292803292920+intron-Distal5.261508.37727K562YWHAG
chr5298914298982+intron-Distal3.859763.31570HepG2HNRNPK
chr5283359283388+intron-Distal3.820194.14896HepG2HNRNPM
chr5295013295077+intron-Distal4.479168.02514K562SLTM
chr5273723273809+intron-Distal3.722395.05066K562HNRNPM
chr5282759282799+intron-Distal4.832635.94008HepG2HNRNPM
chr5280657280743+intron-Distal4.313343.77360K562GTF2F1
chr5286565286654+intron-Distal6.4060445.00179K562HNRNPM
chr5298908298992+intron-Distal5.181376.42388HepG2DDX59
chr5298894298998+intron-Distal6.007789.70511K562PCBP1
chr5283485283538+intron-Distal5.2117114.82019K562EXOSC5
chr5283778283873+intron-Distal4.8388522.49321K562HNRNPM
chr5274064274123+intron-Distal4.281247.01277K562EXOSC5
chr5344159344223+intron-Distal,intron-Proximal4.615983.72755K562EIF4G2
chr5284171284196+intron-Distal4.458654.64592HepG2HNRNPM
chr5283346283394+intron-Distal4.7202413.63547K562HNRNPM
chr5299014299121+intron-Distal3.358056.30718HepG2RBFOX2
chr5284424284528+intron-Distal3.137116.78086HepG2HNRNPM
chr5287116287178+intron-Distal6.0554517.32358K562EXOSC5
chr5309365309418+intron-Distal3.301938.47958K562NONO
chr5308314308371+intron-Distal4.5267111.94156K562NONO
chr5282466282527+intron-Distal4.250518.16142HepG2BCCIP
chr5315882315944+intron-Distal4.533845.15063HepG2CSTF2T
chr5286888286937+intron-Distal4.0663811.19312HepG2HNRNPM
chr5286460286542+intron-Distal3.311473.64784K562EWSR1
chr5302174302205+intron-Distal4.9694511.45661K562EIF4G2
chr5310409310443+intron-Distal3.306923.58549K562NONO
chr5345673345784+intron-Distal6.394178.04355K562EIF4G2
chr5302629302685+intron-Distal4.954297.75663K562CSTF2T
chr5286398286452+intron-Distal5.1443615.14615K562EXOSC5
chr5278993279053+intron-Distal3.530153.51298K562AKAP8L
chr5310326310386+intron-Distal3.276273.64784K562EWSR1
chr5283760283892+intron-Distal3.9956210.96982HepG2BCCIP
chr5287043287116+intron-Distal5.3944919.07792K562EXOSC5
chr5307976308049+intron-Distal4.729726.12846K562EWSR1
chr5283990284081+intron-Distal5.526758.87385HepG2EXOSC5
chr5284432284502+intron-Distal4.851158.08380HepG2BCCIP
chr5296549296621+intron-Distal3.574493.73423K562UCHL5
chr5285864285928+intron-Distal4.7543314.87928K562EXOSC5
chr5286456286553+intron-Distal5.4041117.27383HepG2HNRNPM
chr5287083287150+intron-Distal4.255783.71613K562UCHL5
chr5295116295200+intron-Distal4.281264.60638K562GRWD1
chr5286443286514+intron-Distal6.2903036.76770K562HNRNPM
chr5289228289276+intron-Distal3.728783.16028HepG2SUGP2
chr5281515281553+intron-Distal3.477205.34991K562HNRNPM
chr5278978279101+intron-Distal4.6839914.06525K562GTF2F1
chr5281480281485+intron-Distal5.008685.84413K562HNRNPM
chr5299246299381+intron-Distal3.334645.81579HepG2RBFOX2
chr5299042299154+intron-Distal3.227033.59783HepG2HNRNPK
chr5282263282306+intron-Distal5.0930916.12575K562EXOSC5
chr5286959286986+intron-Distal5.5732210.78967K562HNRNPM
chr5283784283825+intron-Distal4.4864712.46063K562EXOSC5
chr5294537294601+intron-Distal3.981208.82687K562UCHL5
chr5307578307634+intron-Distal4.282623.60282K562LSM11
chr5285784285843+intron-Distal5.1822714.82019K562EXOSC5
chr5302320302375+intron-Distal4.657636.49093K562TARDBP
chr5286128286292+intron-Distal4.546496.12418K562FUS
chr5278961279044+intron-Distal6.4571617.12905HepG2FAM120A
chr5286263286314+intron-Distal4.9310213.84610K562EXOSC5
chr5310260310297+intron-Distal3.281613.58549K562NONO
chr5292710292803+intron-Distal3.513067.50303K562UCHL5
chr5294744294831+intron-Distal3.984919.16086K562UCHL5
chr5302324302376+intron-Distal6.4346915.93547K562EIF4G2
chr5286596286642+intron-Distal4.9032212.22458K562EXOSC5
chr5286466286524+intron-Distal4.310094.45655HepG2BCCIP
chr5302717302770+intron-Distal4.346533.96304K562CSTF2T
chr5296280296369+intron-Distal4.363274.39341K562YWHAG
chr5293128293174+intron-Distal3.391103.95937K562UCHL5
chr5287147287242+intron-Distal5.592659.19926HepG2EXOSC5
chr5345102345160+intron-Distal4.158353.59342K562CSTF2T
chr5283675283735+intron-Distal3.881217.29297HepG2BCCIP
chr5279127279205+intron-Distal4.569966.13283K562NONO
chr5285474285533+intron-Distal4.001893.07008K562NONO
chr5283831283885+intron-Distal5.232707.30663HepG2EXOSC5
chr5303164303277+intron-Distal3.984324.34791K562FUS
chr5282383282453+intron-Distal6.5812124.37086K562EXOSC5
chr5302882302944+intron-Distal5.5551419.30739K562EIF4G2
chr5287182287270+intron-Distal5.3745819.13147K562HNRNPM
chr5282189282254+intron-Distal5.6873626.35513K562EXOSC5
chr5291854291897+intron-Distal3.795383.59673K562HNRNPL
chr5283922283946+intron-Distal4.254727.61465K562EXOSC5
chr5307706307809+intron-Distal6.0150618.14824K562NONO
chr5295495295534+intron-Distal3.543983.90201K562SLTM
chr5344288344407+intron-Distal4.371793.87340HepG2CSTF2T
chr5278982279045+intron-Distal3.398083.62708K562CSTF2T
chr5281518281551+intron-Distal4.587865.42395HepG2HNRNPM
chr5309719309806+intron-Distal3.900464.42591K562DDX52
chr5318388318458+intron-Distal5.540777.61882HepG2PCBP2
chr5294487294537+intron-Distal5.296138.80307K562UCHL5
chr5309530309580+intron-Distal3.781388.82082K562NONO
chr5292763292933+intron-Distal3.150737.71968K562SAFB2
chr5296801296869+intron-Distal3.255777.51340K562SLTM
chr5282373282428+intron-Distal5.092328.10504HepG2BCCIP
chr5318198318279+intron-Distal5.491007.61882HepG2PCBP2
chr5282528282570+intron-Distal3.813103.24367K562DDX52
chr5344941345010+intron-Distal4.068604.22598K562CSTF2T
chr5284028284075+intron-Distal4.633945.83408HepG2BCCIP
chr5281712281789+intron-Distal5.9304310.15112HepG2EXOSC5
chr5296134296193+intron-Distal4.135974.51328K562SAFB2
chr5298973299120+intron-Distal6.2921117.51626HepG2PCBP2
chr5285903285934+intron-Distal4.053456.77280K562HNRNPM
chr5282863282917+intron-Distal6.6182125.72071K562EXOSC5
chr5318009318106+intron-Distal6.0420610.94693HepG2PCBP2
chr5284442284447+intron-Distal4.036476.41051K562EXOSC5
chr5284368284418+intron-Distal5.3997420.39543K562EXOSC5
chr5284266284306+intron-Distal5.9752716.32087K562EXOSC5
chr5294646294683+intron-Distal3.608623.31097K562SLTM
chr5308986309005+intron-Distal4.145964.08332K562NONO
chr5286132286203+intron-Distal4.816566.26413HepG2BCCIP
chr5294536294589+intron-Distal3.740146.73435K562SLTM
chr5287187287246+intron-Distal4.5306714.58103K562EXOSC5
chr5302809302850+intron-Distal6.1538613.94931K562EIF4G2
chr5307514307642+intron-Distal3.215164.49883K562TARDBP
chr5293256293308+intron-Distal4.913306.23323K562UCHL5
chr5286827286964+intron-Distal5.2117129.23656K562EXOSC5
chr5286318286384+intron-Distal4.017189.61167HepG2HNRNPM
chr5284263284341+intron-Distal6.4571322.70878K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDCD6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDCD6 is not available on ENCORE database.

  • 75 RBPs can affect the levels of PDCD6.  








The Knockdown/knockout RNA-Seq assay for PDCD6 is not available on ENCORE database.





75 RBPs can affect the gene expression of PDCD6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDCD6ENSG00000249915.31447.749901099.148200.397306.188305.35240HepG2ACO1
PDCD6ENSG00000249915.31816.368301273.920700.511703.981903.36100HepG2AKAP1
PDCD6ENSG00000249915.31354.831701054.056300.362102.477801.73140HepG2ASCC1
PDCD6ENSG00000249915.31024.21410759.649600.431003.569902.89960HepG2BOP1
PDCD6ENSG00000249915.31515.873901001.428000.598006.158605.03390HepG2CIRBP
PDCD6ENSG00000249915.31910.585201481.421400.366905.205804.37460HepG2CELF1
PDCD6ENSG00000249915.31375.177401592.84330-0.212002.313001.62730HepG2DAZAP1
PDCD6ENSG00000249915.31545.365101220.306600.340602.247801.67870HepG2DDX3X
PDCD6ENSG00000249915.3853.550401051.56160-0.301002.885702.19420HepG2DKC1
PDCD6ENSG00000249915.3700.278201007.72510-0.525104.127303.41210HepG2EIF2S1
PDCD6ENSG00000249915.31491.703801084.312900.460102.710602.02840HepG2EIF4B
PDCD6ENSG00000249915.31304.703501571.47940-0.268402.885902.03430HepG2EIF4G1
PDCD6ENSG00000249915.31389.916101073.976900.371903.480502.54140HepG2EWSR1
PDCD6ENSG00000249915.31476.704601123.660600.394102.918002.20620HepG2FXR1
PDCD6ENSG00000249915.3445.43980596.18180-0.420502.662401.78370HepG2GEMIN5
PDCD6ENSG00000249915.31051.445601272.90580-0.275802.607001.91060HepG2HNRNPF
PDCD6ENSG00000249915.31336.166501055.514900.340102.450301.79060HepG2HNRNPK
PDCD6ENSG00000249915.3998.86470779.194500.358202.646701.71440HepG2HNRNPM
PDCD6ENSG00000249915.3846.68210989.66720-0.225101.859201.35310HepG2HNRNPU
PDCD6ENSG00000249915.31900.698401320.318800.525503.890802.90210HepG2LARP4
PDCD6ENSG00000249915.3800.448601113.52120-0.476206.778705.89440HepG2PCBP1
PDCD6ENSG00000249915.3697.37860882.70440-0.340003.043202.27380HepG2PPIL4
PDCD6ENSG00000249915.31018.263301227.14010-0.269202.251201.67780HepG2QKI
PDCD6ENSG00000249915.32296.623201590.308300.530109.380908.55490HepG2RBM22
PDCD6ENSG00000249915.31013.330801260.97000-0.315403.385102.79930HepG2NELFE
PDCD6ENSG00000249915.3964.596201174.39400-0.283902.828602.20580HepG2RECQL
PDCD6ENSG00000249915.31017.776401371.12220-0.429903.690502.91990HepG2RPLP0
PDCD6ENSG00000249915.3868.375201250.56270-0.526208.094907.00790HepG2SRSF7
PDCD6ENSG00000249915.31355.314501559.42140-0.202402.089401.62780HepG2SSB
PDCD6ENSG00000249915.3852.242101106.70330-0.376903.967703.31510HepG2TAF15
PDCD6ENSG00000249915.31145.92470970.242600.240002.243201.72500HepG2TRIM56
PDCD6ENSG00000249915.3747.56230966.13050-0.370002.621302.00880HepG2U2AF1
PDCD6ENSG00000249915.3789.93280590.077200.420702.692101.94340HepG2UCHL5
PDCD6ENSG00000249915.31247.13810917.928000.442106.364205.51730HepG2UTP3
PDCD6ENSG00000249915.3450.47350757.88420-0.750507.234306.23270HepG2ZC3H8
PDCD6ENSG00000249915.32112.347402407.72010-0.188801.918201.42940K562AGGF1
PDCD6ENSG00000249915.33225.369904156.89350-0.366003.484102.84130K562AQR
PDCD6ENSG00000249915.31006.722401371.95380-0.446604.809003.77970K562CPSF6
PDCD6ENSG00000249915.34998.284205856.72240-0.228702.504701.57720K562CELF1
PDCD6ENSG00000249915.31423.689001857.94390-0.384104.115702.81100K562DDX3X
PDCD6ENSG00000249915.32334.959402972.87970-0.348505.805404.91240K562DDX47
PDCD6ENSG00000249915.3765.202101265.77530-0.726104.711903.36210K562EIF3A
PDCD6ENSG00000249915.31606.927902149.58700-0.419802.953301.88080K562EIF3D
PDCD6ENSG00000249915.31410.826501941.06310-0.460305.006903.90150K562EIF4A3
PDCD6ENSG00000249915.31427.584501805.48840-0.338802.383701.34850K562FKBP4
PDCD6ENSG00000249915.31082.253501395.94210-0.367202.819401.95700K562FMR1
PDCD6ENSG00000249915.31129.063801575.28760-0.480503.157702.39400K562G3BP2
PDCD6ENSG00000249915.31376.007102012.80300-0.548705.466503.44990K562GEMIN5
PDCD6ENSG00000249915.31896.282602502.72230-0.400305.916804.28910K562GLRX3
PDCD6ENSG00000249915.32234.698002966.96220-0.408905.186003.72980K562HNRNPA1
PDCD6ENSG00000249915.31173.138302078.76100-0.8254015.7678014.42660K562HNRNPC
PDCD6ENSG00000249915.32132.571201657.420600.363602.640401.73280K562HNRNPM
PDCD6ENSG00000249915.32712.981603285.69190-0.276303.305302.33060K562HNRNPU
PDCD6ENSG00000249915.31999.802402388.76810-0.256402.212701.39530K562MATR3
PDCD6ENSG00000249915.31905.746302631.29440-0.4654010.169208.72180K562MTPAP
PDCD6ENSG00000249915.31502.788601938.30870-0.367204.138702.61930K562NCBP2
PDCD6ENSG00000249915.32406.489202923.55800-0.280806.010104.96940K562NSUN2
PDCD6ENSG00000249915.31753.848602129.68380-0.280102.251001.37280K562PCBP2
PDCD6ENSG00000249915.31716.748502269.59300-0.402803.208802.31310K562PCBP3
PDCD6ENSG00000249915.31429.170401740.90030-0.284702.483101.72630K562POLR2G
PDCD6ENSG00000249915.32837.402002287.506100.310702.655101.85560K562PPIG
PDCD6ENSG00000249915.31448.271701953.67430-0.431903.892603.00480K562PRPF8
PDCD6ENSG00000249915.34092.162205196.67240-0.344703.048502.19310K562PUF60
PDCD6ENSG00000249915.31848.795302484.58740-0.426403.952903.32040K562PUS1
PDCD6ENSG00000249915.32095.409502420.87950-0.208301.832701.33250K562RBM15
PDCD6ENSG00000249915.31471.785502508.71590-0.769403.441601.68550K562RBM39
PDCD6ENSG00000249915.31211.847801990.03880-0.715607.562606.19820K562RPS19
PDCD6ENSG00000249915.32387.500802884.87460-0.273003.557102.64020K562SF3A3
PDCD6ENSG00000249915.3927.730901245.75370-0.425202.907901.90900K562SF3B1
PDCD6ENSG00000249915.3985.018101638.62780-0.7343013.3561011.38040K562SF3B4
PDCD6ENSG00000249915.31245.074601612.32090-0.372903.250302.11710K562SRFBP1
PDCD6ENSG00000249915.32482.492402955.62250-0.251704.175503.04900K562SRPK2
PDCD6ENSG00000249915.31824.566102225.11090-0.286303.445702.12870K562SRSF7
PDCD6ENSG00000249915.31599.305601981.61840-0.309203.050801.45210K562SRSF9
PDCD6ENSG00000249915.31146.408101891.58190-0.722508.208506.41330K562SUPV3L1
PDCD6ENSG00000249915.3966.556001546.38170-0.678003.671501.89930K562TAF15
PDCD6ENSG00000249915.31342.853601792.71220-0.416803.361502.32520K562TIAL1
PDCD6ENSG00000249915.31545.157201904.84280-0.301902.391801.52170K562TRIM56
PDCD6ENSG00000249915.32844.847103310.24030-0.218602.664501.42040K562TROVE2
PDCD6ENSG00000249915.3999.140701527.64690-0.612605.676003.98850K562U2AF1
PDCD6ENSG00000249915.3970.780701577.50390-0.7004011.8595010.17740K562U2AF2
PDCD6ENSG00000249915.31463.675602002.00510-0.451804.161102.88790K562UCHL5
PDCD6ENSG00000249915.32589.033203099.91420-0.259803.876903.03870K562UPF1
PDCD6ENSG00000249915.32196.257602652.49270-0.272302.514701.67730K562WDR3
PDCD6ENSG00000249915.32057.548202758.32580-0.422905.190104.06250K562WDR43
PDCD6ENSG00000249915.33696.057904682.86240-0.341403.548502.54940K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDCD6 is not available on ENCORE database.





19 RBPs can affect the splicing of PDCD6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDCD6ENSG00000249915.3chr5+3067163068753042913043363145313150890.089000.001550.02990includedK562SRSF1
SEPDCD6ENSG00000249915.3chr5+306716306875304291304336314531315089-0.102000.002380.07041excludedK562PRPF8
SEPDCD6ENSG00000249915.3chr5+311407311517304291304336314531315084-0.056000.002060.02250excludedK562AQR
SEPDCD6ENSG00000249915.3chr5+306716306869304291304336311407311517-0.101000.000000.00010excludedK562PUS1
SEPDCD6ENSG00000249915.3chr5+272825272887271739271936304291304336-0.060000.001650.03366excludedK562U2AF1
SEPDCD6ENSG00000249915.3chr5+306716306875304291304336314531314711-0.074000.004040.08993excludedHepG2SF3A3
SEPDCD6ENSG00000249915.3chr5+3067163068693042913043363114073115170.059000.000000.00025includedK562PUM2
SEPDCD6ENSG00000249915.3chr5+306716306875304291304336311407311517-0.085000.000000.00000excludedK562SRSF7
SEPDCD6ENSG00000249915.3chr5+304291306869272825272887311407311517-0.125000.001880.03319excludedK562U2AF2
SEPDCD6ENSG00000249915.3chr5+306716306875304291304336311407311517-0.266000.000000.00000excludedK562TARDBP
SEPDCD6ENSG00000249915.3chr5+311407311517304291304336314531315084-0.056000.002050.06501excludedK562HNRNPU
SEPDCD6ENSG00000249915.3chr5+306716306875304291304336311407311517-0.081000.000510.02703excludedK562HNRNPK
SEPDCD6ENSG00000249915.3chr5+3138153139653114073115173145313150690.054000.000080.02595includedHepG2XRCC6
SEPDCD6ENSG00000249915.3chr5+306716306875304291304336311407311517-0.089000.000080.00534excludedK562PTBP1
A5SSPDCD6ENSG00000249915.3chr5+304291306869304291304336311407311517-0.467000.000000.00001shorterK562TARDBP
A5SSPDCD6ENSG00000249915.3chr5+304291306869304291304336311407311517-0.263000.000040.00239shorterK562PUS1
A5SSPDCD6ENSG00000249915.3chr5+306716306875306716306869311407311517-0.133000.000040.01093shorterHepG2HNRNPU
A5SSPDCD6ENSG00000249915.3chr5+3042913068693042913043363114073115170.189000.000000.00025longerK562PUM2
A5SSPDCD6ENSG00000249915.3chr5+304291306869304291304336311407311517-0.288000.000000.00204shorterK562SRSF7
A5SSPDCD6ENSG00000249915.3chr5+306716306875306716306869311407311517-0.093000.001120.07905shorterHepG2U2AF1
RIPDCD6ENSG00000249915.3chr5+304291306869304291304336306716306869-0.063000.001000.09956excludedK562PCBP1
RIPDCD6ENSG00000249915.3chr5+304291306869304291304336306716306869-0.074000.000030.00145excludedK562SRSF1
RIPDCD6ENSG00000249915.3chr5+3042913068693042913043363067163068690.096000.000250.00839includedHepG2IGF2BP3
RIPDCD6ENSG00000249915.3chr5+3042913068693042913043363067163068690.064000.000760.01281includedHepG2PCBP1
RIPDCD6ENSG00000249915.3chr5+304291306869304291304336306716306869-0.088000.000000.00091excludedK562KHSRP
RIPDCD6ENSG00000249915.3chr5+3042913068693042913043363067163068690.098000.001850.02646includedK562U2AF2
RIPDCD6ENSG00000249915.3chr5+3042913068693042913043363067163068690.108000.000000.00000includedK562AQR
RIPDCD6ENSG00000249915.3chr5+304291306869304291304336306716306869-0.066000.000780.01808excludedK562PTBP1
MXEPDCD6ENSG00000249915.3chr5+2728252728873114073115172717392719363145313150840.132000.002240.057321includedK562UCHL5
MXEPDCD6ENSG00000249915.3chr5+2728252728873114073115172717392719363145313150840.155000.000110.006551includedK562XRN2
MXEPDCD6ENSG00000249915.3chr5+272825272887311407311517271739271936314531315084-0.124000.000190.002152includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDCD6 is not avaliable on ENCORE database.