The Knockdown/knockout RNA-Seq assay for PDCD6 is not available on ENCORE database.
75 RBPs can affect the gene expression of PDCD6 :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
PDCD6 | ENSG00000249915.3 | 1447.74990 | 1099.14820 | 0.39730 | 6.18830 | 5.35240 | HepG2 | ACO1 | |
PDCD6 | ENSG00000249915.3 | 1816.36830 | 1273.92070 | 0.51170 | 3.98190 | 3.36100 | HepG2 | AKAP1 | |
PDCD6 | ENSG00000249915.3 | 1354.83170 | 1054.05630 | 0.36210 | 2.47780 | 1.73140 | HepG2 | ASCC1 | |
PDCD6 | ENSG00000249915.3 | 1024.21410 | 759.64960 | 0.43100 | 3.56990 | 2.89960 | HepG2 | BOP1 | |
PDCD6 | ENSG00000249915.3 | 1515.87390 | 1001.42800 | 0.59800 | 6.15860 | 5.03390 | HepG2 | CIRBP | |
PDCD6 | ENSG00000249915.3 | 1910.58520 | 1481.42140 | 0.36690 | 5.20580 | 4.37460 | HepG2 | CELF1 | |
PDCD6 | ENSG00000249915.3 | 1375.17740 | 1592.84330 | -0.21200 | 2.31300 | 1.62730 | HepG2 | DAZAP1 | |
PDCD6 | ENSG00000249915.3 | 1545.36510 | 1220.30660 | 0.34060 | 2.24780 | 1.67870 | HepG2 | DDX3X | |
PDCD6 | ENSG00000249915.3 | 853.55040 | 1051.56160 | -0.30100 | 2.88570 | 2.19420 | HepG2 | DKC1 | |
PDCD6 | ENSG00000249915.3 | 700.27820 | 1007.72510 | -0.52510 | 4.12730 | 3.41210 | HepG2 | EIF2S1 | |
PDCD6 | ENSG00000249915.3 | 1491.70380 | 1084.31290 | 0.46010 | 2.71060 | 2.02840 | HepG2 | EIF4B | |
PDCD6 | ENSG00000249915.3 | 1304.70350 | 1571.47940 | -0.26840 | 2.88590 | 2.03430 | HepG2 | EIF4G1 | |
PDCD6 | ENSG00000249915.3 | 1389.91610 | 1073.97690 | 0.37190 | 3.48050 | 2.54140 | HepG2 | EWSR1 | |
PDCD6 | ENSG00000249915.3 | 1476.70460 | 1123.66060 | 0.39410 | 2.91800 | 2.20620 | HepG2 | FXR1 | |
PDCD6 | ENSG00000249915.3 | 445.43980 | 596.18180 | -0.42050 | 2.66240 | 1.78370 | HepG2 | GEMIN5 | |
PDCD6 | ENSG00000249915.3 | 1051.44560 | 1272.90580 | -0.27580 | 2.60700 | 1.91060 | HepG2 | HNRNPF | |
PDCD6 | ENSG00000249915.3 | 1336.16650 | 1055.51490 | 0.34010 | 2.45030 | 1.79060 | HepG2 | HNRNPK | |
PDCD6 | ENSG00000249915.3 | 998.86470 | 779.19450 | 0.35820 | 2.64670 | 1.71440 | HepG2 | HNRNPM | |
PDCD6 | ENSG00000249915.3 | 846.68210 | 989.66720 | -0.22510 | 1.85920 | 1.35310 | HepG2 | HNRNPU | |
PDCD6 | ENSG00000249915.3 | 1900.69840 | 1320.31880 | 0.52550 | 3.89080 | 2.90210 | HepG2 | LARP4 | |
PDCD6 | ENSG00000249915.3 | 800.44860 | 1113.52120 | -0.47620 | 6.77870 | 5.89440 | HepG2 | PCBP1 | |
PDCD6 | ENSG00000249915.3 | 697.37860 | 882.70440 | -0.34000 | 3.04320 | 2.27380 | HepG2 | PPIL4 | |
PDCD6 | ENSG00000249915.3 | 1018.26330 | 1227.14010 | -0.26920 | 2.25120 | 1.67780 | HepG2 | QKI | |
PDCD6 | ENSG00000249915.3 | 2296.62320 | 1590.30830 | 0.53010 | 9.38090 | 8.55490 | HepG2 | RBM22 | |
PDCD6 | ENSG00000249915.3 | 1013.33080 | 1260.97000 | -0.31540 | 3.38510 | 2.79930 | HepG2 | NELFE | |
PDCD6 | ENSG00000249915.3 | 964.59620 | 1174.39400 | -0.28390 | 2.82860 | 2.20580 | HepG2 | RECQL | |
PDCD6 | ENSG00000249915.3 | 1017.77640 | 1371.12220 | -0.42990 | 3.69050 | 2.91990 | HepG2 | RPLP0 | |
PDCD6 | ENSG00000249915.3 | 868.37520 | 1250.56270 | -0.52620 | 8.09490 | 7.00790 | HepG2 | SRSF7 | |
PDCD6 | ENSG00000249915.3 | 1355.31450 | 1559.42140 | -0.20240 | 2.08940 | 1.62780 | HepG2 | SSB | |
PDCD6 | ENSG00000249915.3 | 852.24210 | 1106.70330 | -0.37690 | 3.96770 | 3.31510 | HepG2 | TAF15 | |
PDCD6 | ENSG00000249915.3 | 1145.92470 | 970.24260 | 0.24000 | 2.24320 | 1.72500 | HepG2 | TRIM56 | |
PDCD6 | ENSG00000249915.3 | 747.56230 | 966.13050 | -0.37000 | 2.62130 | 2.00880 | HepG2 | U2AF1 | |
PDCD6 | ENSG00000249915.3 | 789.93280 | 590.07720 | 0.42070 | 2.69210 | 1.94340 | HepG2 | UCHL5 | |
PDCD6 | ENSG00000249915.3 | 1247.13810 | 917.92800 | 0.44210 | 6.36420 | 5.51730 | HepG2 | UTP3 | |
PDCD6 | ENSG00000249915.3 | 450.47350 | 757.88420 | -0.75050 | 7.23430 | 6.23270 | HepG2 | ZC3H8 | |
PDCD6 | ENSG00000249915.3 | 2112.34740 | 2407.72010 | -0.18880 | 1.91820 | 1.42940 | K562 | AGGF1 | |
PDCD6 | ENSG00000249915.3 | 3225.36990 | 4156.89350 | -0.36600 | 3.48410 | 2.84130 | K562 | AQR | |
PDCD6 | ENSG00000249915.3 | 1006.72240 | 1371.95380 | -0.44660 | 4.80900 | 3.77970 | K562 | CPSF6 | |
PDCD6 | ENSG00000249915.3 | 4998.28420 | 5856.72240 | -0.22870 | 2.50470 | 1.57720 | K562 | CELF1 | |
PDCD6 | ENSG00000249915.3 | 1423.68900 | 1857.94390 | -0.38410 | 4.11570 | 2.81100 | K562 | DDX3X | |
PDCD6 | ENSG00000249915.3 | 2334.95940 | 2972.87970 | -0.34850 | 5.80540 | 4.91240 | K562 | DDX47 | |
PDCD6 | ENSG00000249915.3 | 765.20210 | 1265.77530 | -0.72610 | 4.71190 | 3.36210 | K562 | EIF3A | |
PDCD6 | ENSG00000249915.3 | 1606.92790 | 2149.58700 | -0.41980 | 2.95330 | 1.88080 | K562 | EIF3D | |
PDCD6 | ENSG00000249915.3 | 1410.82650 | 1941.06310 | -0.46030 | 5.00690 | 3.90150 | K562 | EIF4A3 | |
PDCD6 | ENSG00000249915.3 | 1427.58450 | 1805.48840 | -0.33880 | 2.38370 | 1.34850 | K562 | FKBP4 | |
PDCD6 | ENSG00000249915.3 | 1082.25350 | 1395.94210 | -0.36720 | 2.81940 | 1.95700 | K562 | FMR1 | |
PDCD6 | ENSG00000249915.3 | 1129.06380 | 1575.28760 | -0.48050 | 3.15770 | 2.39400 | K562 | G3BP2 | |
PDCD6 | ENSG00000249915.3 | 1376.00710 | 2012.80300 | -0.54870 | 5.46650 | 3.44990 | K562 | GEMIN5 | |
PDCD6 | ENSG00000249915.3 | 1896.28260 | 2502.72230 | -0.40030 | 5.91680 | 4.28910 | K562 | GLRX3 | |
PDCD6 | ENSG00000249915.3 | 2234.69800 | 2966.96220 | -0.40890 | 5.18600 | 3.72980 | K562 | HNRNPA1 | |
PDCD6 | ENSG00000249915.3 | 1173.13830 | 2078.76100 | -0.82540 | 15.76780 | 14.42660 | K562 | HNRNPC | |
PDCD6 | ENSG00000249915.3 | 2132.57120 | 1657.42060 | 0.36360 | 2.64040 | 1.73280 | K562 | HNRNPM | |
PDCD6 | ENSG00000249915.3 | 2712.98160 | 3285.69190 | -0.27630 | 3.30530 | 2.33060 | K562 | HNRNPU | |
PDCD6 | ENSG00000249915.3 | 1999.80240 | 2388.76810 | -0.25640 | 2.21270 | 1.39530 | K562 | MATR3 | |
PDCD6 | ENSG00000249915.3 | 1905.74630 | 2631.29440 | -0.46540 | 10.16920 | 8.72180 | K562 | MTPAP | |
PDCD6 | ENSG00000249915.3 | 1502.78860 | 1938.30870 | -0.36720 | 4.13870 | 2.61930 | K562 | NCBP2 | |
PDCD6 | ENSG00000249915.3 | 2406.48920 | 2923.55800 | -0.28080 | 6.01010 | 4.96940 | K562 | NSUN2 | |
PDCD6 | ENSG00000249915.3 | 1753.84860 | 2129.68380 | -0.28010 | 2.25100 | 1.37280 | K562 | PCBP2 | |
PDCD6 | ENSG00000249915.3 | 1716.74850 | 2269.59300 | -0.40280 | 3.20880 | 2.31310 | K562 | PCBP3 | |
PDCD6 | ENSG00000249915.3 | 1429.17040 | 1740.90030 | -0.28470 | 2.48310 | 1.72630 | K562 | POLR2G | |
PDCD6 | ENSG00000249915.3 | 2837.40200 | 2287.50610 | 0.31070 | 2.65510 | 1.85560 | K562 | PPIG | |
PDCD6 | ENSG00000249915.3 | 1448.27170 | 1953.67430 | -0.43190 | 3.89260 | 3.00480 | K562 | PRPF8 | |
PDCD6 | ENSG00000249915.3 | 4092.16220 | 5196.67240 | -0.34470 | 3.04850 | 2.19310 | K562 | PUF60 | |
PDCD6 | ENSG00000249915.3 | 1848.79530 | 2484.58740 | -0.42640 | 3.95290 | 3.32040 | K562 | PUS1 | |
PDCD6 | ENSG00000249915.3 | 2095.40950 | 2420.87950 | -0.20830 | 1.83270 | 1.33250 | K562 | RBM15 | |
PDCD6 | ENSG00000249915.3 | 1471.78550 | 2508.71590 | -0.76940 | 3.44160 | 1.68550 | K562 | RBM39 | |
PDCD6 | ENSG00000249915.3 | 1211.84780 | 1990.03880 | -0.71560 | 7.56260 | 6.19820 | K562 | RPS19 | |
PDCD6 | ENSG00000249915.3 | 2387.50080 | 2884.87460 | -0.27300 | 3.55710 | 2.64020 | K562 | SF3A3 | |
PDCD6 | ENSG00000249915.3 | 927.73090 | 1245.75370 | -0.42520 | 2.90790 | 1.90900 | K562 | SF3B1 | |
PDCD6 | ENSG00000249915.3 | 985.01810 | 1638.62780 | -0.73430 | 13.35610 | 11.38040 | K562 | SF3B4 | |
PDCD6 | ENSG00000249915.3 | 1245.07460 | 1612.32090 | -0.37290 | 3.25030 | 2.11710 | K562 | SRFBP1 | |
PDCD6 | ENSG00000249915.3 | 2482.49240 | 2955.62250 | -0.25170 | 4.17550 | 3.04900 | K562 | SRPK2 | |
PDCD6 | ENSG00000249915.3 | 1824.56610 | 2225.11090 | -0.28630 | 3.44570 | 2.12870 | K562 | SRSF7 | |
PDCD6 | ENSG00000249915.3 | 1599.30560 | 1981.61840 | -0.30920 | 3.05080 | 1.45210 | K562 | SRSF9 | |
PDCD6 | ENSG00000249915.3 | 1146.40810 | 1891.58190 | -0.72250 | 8.20850 | 6.41330 | K562 | SUPV3L1 | |
PDCD6 | ENSG00000249915.3 | 966.55600 | 1546.38170 | -0.67800 | 3.67150 | 1.89930 | K562 | TAF15 | |
PDCD6 | ENSG00000249915.3 | 1342.85360 | 1792.71220 | -0.41680 | 3.36150 | 2.32520 | K562 | TIAL1 | |
PDCD6 | ENSG00000249915.3 | 1545.15720 | 1904.84280 | -0.30190 | 2.39180 | 1.52170 | K562 | TRIM56 | |
PDCD6 | ENSG00000249915.3 | 2844.84710 | 3310.24030 | -0.21860 | 2.66450 | 1.42040 | K562 | TROVE2 | |
PDCD6 | ENSG00000249915.3 | 999.14070 | 1527.64690 | -0.61260 | 5.67600 | 3.98850 | K562 | U2AF1 | |
PDCD6 | ENSG00000249915.3 | 970.78070 | 1577.50390 | -0.70040 | 11.85950 | 10.17740 | K562 | U2AF2 | |
PDCD6 | ENSG00000249915.3 | 1463.67560 | 2002.00510 | -0.45180 | 4.16110 | 2.88790 | K562 | UCHL5 | |
PDCD6 | ENSG00000249915.3 | 2589.03320 | 3099.91420 | -0.25980 | 3.87690 | 3.03870 | K562 | UPF1 | |
PDCD6 | ENSG00000249915.3 | 2196.25760 | 2652.49270 | -0.27230 | 2.51470 | 1.67730 | K562 | WDR3 | |
PDCD6 | ENSG00000249915.3 | 2057.54820 | 2758.32580 | -0.42290 | 5.19010 | 4.06250 | K562 | WDR43 | |
PDCD6 | ENSG00000249915.3 | 3696.05790 | 4682.86240 | -0.34140 | 3.54850 | 2.54940 | K562 | ZC3H8 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for PDCD6 is not available on ENCORE database.
19 RBPs can affect the splicing of PDCD6 :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 314531 | 315089 | 0.08900 | 0.00155 | 0.02990 | included | K562 | SRSF1 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 314531 | 315089 | -0.10200 | 0.00238 | 0.07041 | excluded | K562 | PRPF8 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 311407 | 311517 | | | 304291 | 304336 | 314531 | 315084 | -0.05600 | 0.00206 | 0.02250 | excluded | K562 | AQR | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306869 | | | 304291 | 304336 | 311407 | 311517 | -0.10100 | 0.00000 | 0.00010 | excluded | K562 | PUS1 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 272825 | 272887 | | | 271739 | 271936 | 304291 | 304336 | -0.06000 | 0.00165 | 0.03366 | excluded | K562 | U2AF1 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 314531 | 314711 | -0.07400 | 0.00404 | 0.08993 | excluded | HepG2 | SF3A3 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306869 | | | 304291 | 304336 | 311407 | 311517 | 0.05900 | 0.00000 | 0.00025 | included | K562 | PUM2 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 311407 | 311517 | -0.08500 | 0.00000 | 0.00000 | excluded | K562 | SRSF7 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 272825 | 272887 | 311407 | 311517 | -0.12500 | 0.00188 | 0.03319 | excluded | K562 | U2AF2 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 311407 | 311517 | -0.26600 | 0.00000 | 0.00000 | excluded | K562 | TARDBP | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 311407 | 311517 | | | 304291 | 304336 | 314531 | 315084 | -0.05600 | 0.00205 | 0.06501 | excluded | K562 | HNRNPU | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 311407 | 311517 | -0.08100 | 0.00051 | 0.02703 | excluded | K562 | HNRNPK | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 313815 | 313965 | | | 311407 | 311517 | 314531 | 315069 | 0.05400 | 0.00008 | 0.02595 | included | HepG2 | XRCC6 | |
SE | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 304291 | 304336 | 311407 | 311517 | -0.08900 | 0.00008 | 0.00534 | excluded | K562 | PTBP1 | |
A5SS | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 311407 | 311517 | -0.46700 | 0.00000 | 0.00001 | shorter | K562 | TARDBP | |
A5SS | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 311407 | 311517 | -0.26300 | 0.00004 | 0.00239 | shorter | K562 | PUS1 | |
A5SS | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 306716 | 306869 | 311407 | 311517 | -0.13300 | 0.00004 | 0.01093 | shorter | HepG2 | HNRNPU | |
A5SS | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 311407 | 311517 | 0.18900 | 0.00000 | 0.00025 | longer | K562 | PUM2 | |
A5SS | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 311407 | 311517 | -0.28800 | 0.00000 | 0.00204 | shorter | K562 | SRSF7 | |
A5SS | PDCD6 | ENSG00000249915.3 | chr5 | + | 306716 | 306875 | | | 306716 | 306869 | 311407 | 311517 | -0.09300 | 0.00112 | 0.07905 | shorter | HepG2 | U2AF1 | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | -0.06300 | 0.00100 | 0.09956 | excluded | K562 | PCBP1 | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | -0.07400 | 0.00003 | 0.00145 | excluded | K562 | SRSF1 | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | 0.09600 | 0.00025 | 0.00839 | included | HepG2 | IGF2BP3 | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | 0.06400 | 0.00076 | 0.01281 | included | HepG2 | PCBP1 | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | -0.08800 | 0.00000 | 0.00091 | excluded | K562 | KHSRP | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | 0.09800 | 0.00185 | 0.02646 | included | K562 | U2AF2 | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | 0.10800 | 0.00000 | 0.00000 | included | K562 | AQR | |
RI | PDCD6 | ENSG00000249915.3 | chr5 | + | 304291 | 306869 | | | 304291 | 304336 | 306716 | 306869 | -0.06600 | 0.00078 | 0.01808 | excluded | K562 | PTBP1 | |
MXE | PDCD6 | ENSG00000249915.3 | chr5 | + | 272825 | 272887 | 311407 | 311517 | 271739 | 271936 | 314531 | 315084 | 0.13200 | 0.00224 | 0.05732 | 1included | K562 | UCHL5 | |
MXE | PDCD6 | ENSG00000249915.3 | chr5 | + | 272825 | 272887 | 311407 | 311517 | 271739 | 271936 | 314531 | 315084 | 0.15500 | 0.00011 | 0.00655 | 1included | K562 | XRN2 | |
MXE | PDCD6 | ENSG00000249915.3 | chr5 | + | 272825 | 272887 | 311407 | 311517 | 271739 | 271936 | 314531 | 315084 | -0.12400 | 0.00019 | 0.00215 | 2included | K562 | AQR | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for PDCD6 is not avaliable on ENCORE database.