The Knockdown/knockout RNA-Seq assay for NMD3 is not available on ENCORE database.
118 RBPs can affect the gene expression of NMD3 :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
NMD3 | ENSG00000169251.8 | 864.33000 | 1310.55120 | -0.60050 | 4.43760 | 3.26590 | HepG2 | ABCF1 | |
NMD3 | ENSG00000169251.8 | 474.27210 | 1118.55950 | -1.23790 | 14.34180 | 12.34900 | HepG2 | ADAR | |
NMD3 | ENSG00000169251.8 | 1661.65520 | 2121.08580 | -0.35220 | 1.97650 | 1.30940 | HepG2 | ASCC1 | |
NMD3 | ENSG00000169251.8 | 732.83060 | 1046.36470 | -0.51380 | 2.09200 | 1.30590 | HepG2 | BCLAF1 | |
NMD3 | ENSG00000169251.8 | 849.50820 | 1157.38990 | -0.44620 | 3.86210 | 3.16740 | HepG2 | BOP1 | |
NMD3 | ENSG00000169251.8 | 739.33270 | 1062.55100 | -0.52320 | 4.60820 | 3.74060 | HepG2 | CPSF6 | |
NMD3 | ENSG00000169251.8 | 1154.27840 | 1680.48930 | -0.54190 | 9.76420 | 8.69660 | HepG2 | CELF1 | |
NMD3 | ENSG00000169251.8 | 1572.12420 | 1807.11120 | -0.20100 | 2.54380 | 1.82760 | HepG2 | DAZAP1 | |
NMD3 | ENSG00000169251.8 | 1008.27950 | 1253.61740 | -0.31420 | 4.14410 | 3.14710 | HepG2 | DDX19B | |
NMD3 | ENSG00000169251.8 | 846.18470 | 1054.59970 | -0.31770 | 1.96640 | 1.38190 | HepG2 | DDX21 | |
NMD3 | ENSG00000169251.8 | 1573.76560 | 2109.04870 | -0.42240 | 2.36050 | 1.78630 | HepG2 | DDX6 | |
NMD3 | ENSG00000169251.8 | 997.72950 | 1296.82940 | -0.37830 | 4.70180 | 3.86110 | HepG2 | DKC1 | |
NMD3 | ENSG00000169251.8 | 827.85020 | 1116.31520 | -0.43130 | 5.55360 | 4.67570 | HepG2 | DNAJC2 | |
NMD3 | ENSG00000169251.8 | 701.91970 | 1057.25990 | -0.59100 | 5.14050 | 3.91960 | HepG2 | EEF2 | |
NMD3 | ENSG00000169251.8 | 1403.02430 | 2027.95790 | -0.53150 | 3.55460 | 2.88640 | HepG2 | EIF2S1 | |
NMD3 | ENSG00000169251.8 | 675.61390 | 994.50570 | -0.55780 | 4.40530 | 2.94110 | HepG2 | EIF2S2 | |
NMD3 | ENSG00000169251.8 | 1238.74590 | 2241.36320 | -0.85550 | 6.81330 | 5.80820 | HepG2 | EIF4A3 | |
NMD3 | ENSG00000169251.8 | 1248.64620 | 2181.84010 | -0.80520 | 6.65670 | 5.62170 | HepG2 | EIF4B | |
NMD3 | ENSG00000169251.8 | 2118.99300 | 1782.67740 | 0.24920 | 2.73800 | 1.90490 | HepG2 | EIF4G1 | |
NMD3 | ENSG00000169251.8 | 1553.41610 | 2540.76220 | -0.70980 | 19.26820 | 17.92100 | HepG2 | ETF1 | |
NMD3 | ENSG00000169251.8 | 857.65970 | 1277.53920 | -0.57490 | 3.82430 | 2.51480 | HepG2 | FUS | |
NMD3 | ENSG00000169251.8 | 1537.09610 | 2260.74160 | -0.55660 | 3.98980 | 3.16830 | HepG2 | FXR1 | |
NMD3 | ENSG00000169251.8 | 1374.96630 | 2097.53750 | -0.60930 | 4.34910 | 3.52320 | HepG2 | G3BP1 | |
NMD3 | ENSG00000169251.8 | 1634.10630 | 2226.32380 | -0.44620 | 2.98070 | 2.05590 | HepG2 | G3BP2 | |
NMD3 | ENSG00000169251.8 | 374.58110 | 764.21320 | -1.02870 | 13.12270 | 11.28520 | HepG2 | GEMIN5 | |
NMD3 | ENSG00000169251.8 | 969.89570 | 1352.93620 | -0.48020 | 2.80220 | 1.77600 | HepG2 | GNB2L1 | |
NMD3 | ENSG00000169251.8 | 659.99540 | 1204.49530 | -0.86790 | 9.78860 | 8.63450 | HepG2 | GPKOW | |
NMD3 | ENSG00000169251.8 | 1077.36290 | 1574.12880 | -0.54700 | 3.72390 | 2.11850 | HepG2 | HNRNPA0 | |
NMD3 | ENSG00000169251.8 | 516.77200 | 1137.18220 | -1.13790 | 20.00890 | 18.53570 | HepG2 | HNRNPA1 | |
NMD3 | ENSG00000169251.8 | 689.36210 | 1264.86150 | -0.87560 | 12.79410 | 11.40170 | HepG2 | HNRNPC | |
NMD3 | ENSG00000169251.8 | 948.81900 | 1158.90910 | -0.28860 | 2.91320 | 2.17840 | HepG2 | HNRNPF | |
NMD3 | ENSG00000169251.8 | 1656.02230 | 2123.08710 | -0.35840 | 1.99050 | 1.39100 | HepG2 | HNRNPK | |
NMD3 | ENSG00000169251.8 | 862.15670 | 1149.47110 | -0.41490 | 3.03340 | 2.37830 | HepG2 | HNRNPLL | |
NMD3 | ENSG00000169251.8 | 970.96640 | 1256.50220 | -0.37190 | 4.41030 | 3.65980 | HepG2 | HNRNPU | |
NMD3 | ENSG00000169251.8 | 819.50910 | 1141.19310 | -0.47770 | 5.24820 | 4.28420 | HepG2 | IGF2BP1 | |
NMD3 | ENSG00000169251.8 | 1331.36680 | 2132.23200 | -0.67950 | 4.91920 | 4.04200 | HepG2 | IGF2BP2 | |
NMD3 | ENSG00000169251.8 | 1090.51560 | 1283.48280 | -0.23510 | 2.60330 | 1.89000 | HepG2 | ILF2 | |
NMD3 | ENSG00000169251.8 | 1494.78930 | 2144.41610 | -0.52060 | 2.89200 | 1.86490 | HepG2 | KHSRP | |
NMD3 | ENSG00000169251.8 | 1321.02560 | 2029.96330 | -0.61980 | 2.32900 | 1.57180 | HepG2 | LARP4 | |
NMD3 | ENSG00000169251.8 | 1274.80070 | 2261.52770 | -0.82700 | 7.21470 | 6.17020 | HepG2 | MAGOH | |
NMD3 | ENSG00000169251.8 | 1746.17290 | 2274.29900 | -0.38120 | 2.03160 | 1.48620 | HepG2 | MATR3 | |
NMD3 | ENSG00000169251.8 | 775.87340 | 1071.51580 | -0.46580 | 2.77000 | 1.96160 | HepG2 | MSI2 | |
NMD3 | ENSG00000169251.8 | 1255.11310 | 2327.96410 | -0.89130 | 7.71650 | 6.68480 | HepG2 | NCBP2 | |
NMD3 | ENSG00000169251.8 | 1453.13980 | 2073.62900 | -0.51300 | 3.28140 | 2.49830 | HepG2 | PABPC4 | |
NMD3 | ENSG00000169251.8 | 1274.10920 | 2013.06070 | -0.65990 | 16.46520 | 15.18680 | HepG2 | PCBP1 | |
NMD3 | ENSG00000169251.8 | 473.22290 | 709.78320 | -0.58490 | 5.93040 | 4.16180 | HepG2 | PKM | |
NMD3 | ENSG00000169251.8 | 1471.29600 | 2048.31860 | -0.47740 | 8.69520 | 7.83580 | HepG2 | PTBP1 | |
NMD3 | ENSG00000169251.8 | 1004.42420 | 1710.49510 | -0.76800 | 12.78980 | 11.63460 | HepG2 | PUF60 | |
NMD3 | ENSG00000169251.8 | 1275.04630 | 1814.41850 | -0.50900 | 7.43330 | 6.35500 | HepG2 | PUM2 | |
NMD3 | ENSG00000169251.8 | 1793.77860 | 2218.47740 | -0.30660 | 3.51600 | 2.82320 | HepG2 | QKI | |
NMD3 | ENSG00000169251.8 | 1741.46670 | 1167.30180 | 0.57700 | 3.08270 | 2.34070 | HepG2 | RAVER1 | |
NMD3 | ENSG00000169251.8 | 1734.47070 | 2123.60210 | -0.29200 | 3.47320 | 2.91110 | HepG2 | RBM22 | |
NMD3 | ENSG00000169251.8 | 1659.00150 | 2013.37390 | -0.27930 | 2.47540 | 1.83370 | HepG2 | RBM25 | |
NMD3 | ENSG00000169251.8 | 730.39270 | 1484.98300 | -1.02370 | 3.35550 | 1.54820 | HepG2 | RBM39 | |
NMD3 | ENSG00000169251.8 | 1058.97960 | 2279.62010 | -1.10610 | 41.28950 | 39.75420 | HepG2 | NELFE | |
NMD3 | ENSG00000169251.8 | 1408.28950 | 2123.08710 | -0.59220 | 13.69960 | 12.48790 | HepG2 | RECQL | |
NMD3 | ENSG00000169251.8 | 984.38900 | 1248.45300 | -0.34280 | 2.68690 | 2.01120 | HepG2 | RPLP0 | |
NMD3 | ENSG00000169251.8 | 488.92770 | 835.12740 | -0.77240 | 9.43420 | 8.38000 | HepG2 | RPS19 | |
NMD3 | ENSG00000169251.8 | 973.57650 | 1473.80400 | -0.59820 | 5.90310 | 4.75750 | HepG2 | RPS2 | |
NMD3 | ENSG00000169251.8 | 995.23460 | 1869.38800 | -0.90950 | 9.58830 | 8.12820 | HepG2 | RPS3A | |
NMD3 | ENSG00000169251.8 | 1031.28910 | 1504.34420 | -0.54470 | 4.89660 | 3.45510 | HepG2 | RPS5 | |
NMD3 | ENSG00000169251.8 | 1301.50780 | 903.78750 | 0.52600 | 4.81630 | 3.81140 | HepG2 | RRP9 | |
NMD3 | ENSG00000169251.8 | 810.46640 | 1118.99640 | -0.46540 | 5.95070 | 5.06170 | HepG2 | SAFB2 | |
NMD3 | ENSG00000169251.8 | 1511.48410 | 2132.64640 | -0.49670 | 9.98850 | 8.96920 | HepG2 | SF3B4 | |
NMD3 | ENSG00000169251.8 | 992.31120 | 1304.98200 | -0.39520 | 4.56670 | 3.77600 | HepG2 | SMN1 | |
NMD3 | ENSG00000169251.8 | 2781.22900 | 2398.52190 | 0.21350 | 2.97250 | 2.45910 | HepG2 | SRFBP1 | |
NMD3 | ENSG00000169251.8 | 1652.19950 | 2225.98750 | -0.43010 | 8.38110 | 7.65920 | HepG2 | SRSF1 | |
NMD3 | ENSG00000169251.8 | 1238.26090 | 1688.79740 | -0.44770 | 7.72260 | 6.74560 | HepG2 | SRSF5 | |
NMD3 | ENSG00000169251.8 | 922.61700 | 1138.59550 | -0.30350 | 3.11190 | 2.37980 | HepG2 | SRSF7 | |
NMD3 | ENSG00000169251.8 | 1369.40840 | 2082.46980 | -0.60470 | 14.88470 | 13.88480 | HepG2 | SSB | |
NMD3 | ENSG00000169251.8 | 1693.82480 | 1920.68550 | -0.18130 | 2.10330 | 1.54670 | HepG2 | SUCLG1 | |
NMD3 | ENSG00000169251.8 | 1541.09090 | 2000.71110 | -0.37660 | 4.46100 | 3.77490 | HepG2 | TAF15 | |
NMD3 | ENSG00000169251.8 | 465.81590 | 1221.08960 | -1.39030 | 28.05280 | 26.76800 | HepG2 | TIAL1 | |
NMD3 | ENSG00000169251.8 | 1060.48680 | 1231.83030 | -0.21610 | 1.96840 | 1.47730 | HepG2 | TRIM56 | |
NMD3 | ENSG00000169251.8 | 1401.52810 | 1670.98950 | -0.25370 | 2.08150 | 1.33330 | HepG2 | TUFM | |
NMD3 | ENSG00000169251.8 | 644.84950 | 1698.79310 | -1.39750 | 5.55690 | 4.11480 | HepG2 | U2AF2 | |
NMD3 | ENSG00000169251.8 | 731.00100 | 1031.22700 | -0.49640 | 7.16810 | 6.13140 | HepG2 | UPF1 | |
NMD3 | ENSG00000169251.8 | 628.85370 | 1079.50310 | -0.77960 | 2.85710 | 1.83590 | HepG2 | UPF2 | |
NMD3 | ENSG00000169251.8 | 829.26420 | 995.60520 | -0.26370 | 2.37500 | 1.81060 | HepG2 | UTP3 | |
NMD3 | ENSG00000169251.8 | 1573.68670 | 1147.57410 | 0.45550 | 2.56180 | 1.35460 | HepG2 | XRCC5 | |
NMD3 | ENSG00000169251.8 | 550.89990 | 1160.10850 | -1.07440 | 6.58680 | 5.48430 | HepG2 | XRN2 | |
NMD3 | ENSG00000169251.8 | 795.99600 | 929.77090 | -0.22410 | 1.93160 | 1.35500 | HepG2 | ZC3H8 | |
NMD3 | ENSG00000169251.8 | 1369.02770 | 1134.14870 | 0.27140 | 3.50410 | 2.90890 | HepG2 | ZNF622 | |
NMD3 | ENSG00000169251.8 | 583.41790 | 1187.21620 | -1.02500 | 4.32990 | 2.15920 | K562 | ADAR | |
NMD3 | ENSG00000169251.8 | 3652.13260 | 4110.88990 | -0.17070 | 1.94610 | 1.45450 | K562 | AGGF1 | |
NMD3 | ENSG00000169251.8 | 4467.05270 | 6179.11580 | -0.46810 | 5.73780 | 4.94610 | K562 | AQR | |
NMD3 | ENSG00000169251.8 | 2997.27530 | 3608.61230 | -0.26780 | 3.47630 | 1.96610 | K562 | BCCIP | |
NMD3 | ENSG00000169251.8 | 2392.60200 | 3487.08190 | -0.54340 | 14.91570 | 12.65550 | K562 | BCLAF1 | |
NMD3 | ENSG00000169251.8 | 797.36670 | 1162.42930 | -0.54380 | 2.40870 | 1.43950 | K562 | CCAR1 | |
NMD3 | ENSG00000169251.8 | 3522.49000 | 4341.73050 | -0.30170 | 3.06060 | 1.89090 | K562 | CPEB4 | |
NMD3 | ENSG00000169251.8 | 1869.39270 | 2540.90450 | -0.44280 | 5.54440 | 4.44170 | K562 | CPSF6 | |
NMD3 | ENSG00000169251.8 | 5959.03210 | 8051.86810 | -0.43420 | 8.12240 | 6.48620 | K562 | CELF1 | |
NMD3 | ENSG00000169251.8 | 2632.68560 | 3283.03940 | -0.31850 | 4.25070 | 2.52380 | K562 | DDX6 | |
NMD3 | ENSG00000169251.8 | 2210.68610 | 2917.52910 | -0.40030 | 3.63290 | 2.57520 | K562 | EFTUD2 | |
NMD3 | ENSG00000169251.8 | 3046.32450 | 3556.90350 | -0.22360 | 2.77210 | 1.56250 | K562 | EIF2S1 | |
NMD3 | ENSG00000169251.8 | 2281.18580 | 3712.15800 | -0.70250 | 19.91220 | 18.24400 | K562 | EIF2S2 | |
NMD3 | ENSG00000169251.8 | 2444.76980 | 3123.87550 | -0.35360 | 2.36110 | 1.41390 | K562 | EIF3D | |
NMD3 | ENSG00000169251.8 | 2354.99320 | 3046.67980 | -0.37150 | 5.18640 | 3.53370 | K562 | EIF4B | |
NMD3 | ENSG00000169251.8 | 5110.66820 | 6547.89460 | -0.35750 | 7.11540 | 5.62410 | K562 | EIF4G2 | |
NMD3 | ENSG00000169251.8 | 2336.49830 | 2910.70740 | -0.31700 | 2.76440 | 1.91680 | K562 | FIP1L1 | |
NMD3 | ENSG00000169251.8 | 1917.95030 | 2585.22500 | -0.43070 | 4.07540 | 3.03350 | K562 | FMR1 | |
NMD3 | ENSG00000169251.8 | 1605.72310 | 2191.17450 | -0.44850 | 3.98850 | 2.87660 | K562 | FTO | |
NMD3 | ENSG00000169251.8 | 2895.42010 | 3518.25540 | -0.28110 | 3.78630 | 3.09510 | K562 | FXR1 | |
NMD3 | ENSG00000169251.8 | 5066.91400 | 3636.39060 | 0.47850 | 3.62210 | 2.78760 | K562 | G3BP2 | |
NMD3 | ENSG00000169251.8 | 1995.56660 | 2925.00930 | -0.55160 | 5.91440 | 3.83270 | K562 | GEMIN5 | |
NMD3 | ENSG00000169251.8 | 2023.48040 | 2425.97370 | -0.26170 | 2.09100 | 1.39690 | K562 | GPKOW | |
NMD3 | ENSG00000169251.8 | 4003.35790 | 4947.07790 | -0.30540 | 3.25320 | 2.43620 | K562 | GRSF1 | |
NMD3 | ENSG00000169251.8 | 3140.03790 | 3900.86350 | -0.31300 | 3.49070 | 2.27770 | K562 | HNRNPA1 | |
NMD3 | ENSG00000169251.8 | 1425.31430 | 2772.88210 | -0.96010 | 12.55860 | 11.36230 | K562 | HNRNPC | |
NMD3 | ENSG00000169251.8 | 1739.57650 | 2475.76960 | -0.50910 | 5.35960 | 3.70110 | K562 | HNRNPF | |
NMD3 | ENSG00000169251.8 | 3043.94140 | 4059.60150 | -0.41540 | 5.31430 | 3.79380 | K562 | HNRNPL | |
NMD3 | ENSG00000169251.8 | 1932.23110 | 2811.44580 | -0.54100 | 5.07530 | 2.97210 | K562 | LIN28B | |
NMD3 | ENSG00000169251.8 | 1892.34820 | 2471.57560 | -0.38530 | 3.33340 | 1.60720 | K562 | LSM11 | |
NMD3 | ENSG00000169251.8 | 3955.73870 | 4985.45720 | -0.33380 | 3.42730 | 2.48690 | K562 | MAGOH | |
NMD3 | ENSG00000169251.8 | 3703.86690 | 4975.63030 | -0.42580 | 4.66640 | 3.43630 | K562 | MATR3 | |
NMD3 | ENSG00000169251.8 | 1798.39110 | 2368.00620 | -0.39700 | 4.31380 | 3.20480 | K562 | METAP2 | |
NMD3 | ENSG00000169251.8 | 3127.47820 | 6979.28360 | -1.15810 | 32.66080 | 29.35280 | K562 | MSI2 | |
NMD3 | ENSG00000169251.8 | 2517.76680 | 3154.19190 | -0.32510 | 4.50700 | 3.49620 | K562 | MTPAP | |
NMD3 | ENSG00000169251.8 | 2913.83630 | 3504.50080 | -0.26630 | 6.09360 | 5.04710 | K562 | NSUN2 | |
NMD3 | ENSG00000169251.8 | 1960.08230 | 2729.52560 | -0.47770 | 4.61230 | 2.56940 | K562 | NUSAP1 | |
NMD3 | ENSG00000169251.8 | 2623.57690 | 4031.37720 | -0.61970 | 2.16760 | 1.31230 | K562 | PABPN1 | |
NMD3 | ENSG00000169251.8 | 2118.25160 | 2706.87270 | -0.35380 | 2.89940 | 1.43860 | K562 | PHF6 | |
NMD3 | ENSG00000169251.8 | 1529.39590 | 2486.06310 | -0.70090 | 5.48700 | 4.15220 | K562 | PSIP1 | |
NMD3 | ENSG00000169251.8 | 3757.63610 | 4843.54280 | -0.36620 | 3.06410 | 2.36930 | K562 | PTBP1 | |
NMD3 | ENSG00000169251.8 | 4514.08880 | 7144.14980 | -0.66230 | 12.07340 | 10.35700 | K562 | PUF60 | |
NMD3 | ENSG00000169251.8 | 5393.54200 | 7445.41300 | -0.46510 | 11.30530 | 9.36320 | K562 | PUM2 | |
NMD3 | ENSG00000169251.8 | 5309.79340 | 4242.13460 | 0.32380 | 2.86340 | 2.31320 | K562 | PUS1 | |
NMD3 | ENSG00000169251.8 | 2245.63840 | 4959.98250 | -1.14320 | 5.19470 | 2.91240 | K562 | RBM39 | |
NMD3 | ENSG00000169251.8 | 1615.71850 | 2267.65070 | -0.48900 | 5.32380 | 3.94170 | K562 | RCC2 | |
NMD3 | ENSG00000169251.8 | 3546.03710 | 4888.31020 | -0.46310 | 4.28110 | 2.88480 | K562 | NELFE | |
NMD3 | ENSG00000169251.8 | 1666.58970 | 2149.31580 | -0.36700 | 2.90400 | 1.87560 | K562 | RPS3 | |
NMD3 | ENSG00000169251.8 | 2669.42150 | 3458.18120 | -0.37350 | 6.13660 | 4.96140 | K562 | SF3A3 | |
NMD3 | ENSG00000169251.8 | 1699.92550 | 2307.05910 | -0.44060 | 3.53010 | 2.42700 | K562 | SF3B1 | |
NMD3 | ENSG00000169251.8 | 2460.78770 | 3782.52640 | -0.62020 | 12.43930 | 10.54370 | K562 | SF3B4 | |
NMD3 | ENSG00000169251.8 | 2410.38210 | 4498.13110 | -0.90010 | 3.34340 | 1.85810 | K562 | SFPQ | |
NMD3 | ENSG00000169251.8 | 1273.76110 | 2149.73020 | -0.75510 | 7.50640 | 5.58110 | K562 | SRFBP1 | |
NMD3 | ENSG00000169251.8 | 3138.01600 | 3542.99330 | -0.17510 | 2.37610 | 1.50050 | K562 | SRPK2 | |
NMD3 | ENSG00000169251.8 | 2830.88100 | 4748.07500 | -0.74610 | 12.19130 | 10.70260 | K562 | SRSF1 | |
NMD3 | ENSG00000169251.8 | 1540.49810 | 2075.02850 | -0.42970 | 4.91640 | 3.44830 | K562 | SRSF4 | |
NMD3 | ENSG00000169251.8 | 3506.25050 | 4483.67470 | -0.35480 | 3.37160 | 2.19370 | K562 | SRSF5 | |
NMD3 | ENSG00000169251.8 | 2154.35000 | 2672.39420 | -0.31090 | 4.11770 | 2.66800 | K562 | SRSF7 | |
NMD3 | ENSG00000169251.8 | 3659.16210 | 4805.81820 | -0.39330 | 3.46620 | 2.67070 | K562 | TARDBP | |
NMD3 | ENSG00000169251.8 | 3515.51410 | 4635.63440 | -0.39900 | 4.49790 | 3.41560 | K562 | TIA1 | |
NMD3 | ENSG00000169251.8 | 1342.59040 | 2391.24480 | -0.83270 | 10.07070 | 8.18870 | K562 | TIAL1 | |
NMD3 | ENSG00000169251.8 | 1559.08030 | 2539.76370 | -0.70400 | 8.71940 | 6.83090 | K562 | TRIM56 | |
NMD3 | ENSG00000169251.8 | 3174.68370 | 3670.70070 | -0.20940 | 2.84150 | 1.55420 | K562 | TROVE2 | |
NMD3 | ENSG00000169251.8 | 2302.02040 | 3526.32840 | -0.61530 | 6.64520 | 4.79820 | K562 | U2AF1 | |
NMD3 | ENSG00000169251.8 | 2135.77780 | 3641.44410 | -0.76970 | 18.20260 | 16.08000 | K562 | U2AF2 | |
NMD3 | ENSG00000169251.8 | 2309.68640 | 2909.38360 | -0.33300 | 2.61200 | 1.62550 | K562 | UCHL5 | |
NMD3 | ENSG00000169251.8 | 3265.63870 | 3715.90360 | -0.18630 | 2.25690 | 1.60360 | K562 | UPF1 | |
NMD3 | ENSG00000169251.8 | 2026.55730 | 3051.83020 | -0.59060 | 4.47270 | 2.93830 | K562 | UTP3 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for NMD3 is not available on ENCORE database.
8 RBPs can affect the splicing of NMD3 :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.06000 | 0.00055 | 0.01284 | excluded | K562 | SF3B4 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952909 | 160953000 | | | 160952514 | 160952643 | 160955900 | 160955979 | -0.06300 | 0.00511 | 0.07529 | excluded | K562 | SF3B4 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.09800 | 0.00358 | 0.05819 | excluded | HepG2 | U2AF1 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.10900 | 0.00002 | 0.00051 | excluded | HepG2 | U2AF2 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952514 | 160952643 | | | 160951186 | 160951267 | 160955900 | 160955979 | -0.07300 | 0.00000 | 0.00010 | excluded | K562 | AQR | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160956517 | 160956614 | | | 160955900 | 160955979 | 160960295 | 160960441 | -0.06100 | 0.00000 | 0.00001 | excluded | K562 | AQR | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.16400 | 0.00000 | 0.00000 | excluded | K562 | AQR | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160951186 | 160951267 | | | 160945034 | 160945131 | 160952514 | 160952643 | -0.05600 | 0.00032 | 0.03089 | excluded | K562 | SUPV3L1 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952909 | 160953000 | | | 160952514 | 160952643 | 160955900 | 160955979 | -0.08400 | 0.00054 | 0.01021 | excluded | K562 | PUS1 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.11300 | 0.00000 | 0.00005 | excluded | K562 | U2AF1 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952909 | 160953000 | | | 160952514 | 160952643 | 160955900 | 160955979 | -0.10700 | 0.00004 | 0.00155 | excluded | K562 | U2AF1 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.13500 | 0.00155 | 0.04307 | excluded | HepG2 | SF3A3 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160964123 | 160964236 | | | 160960295 | 160960441 | 160965045 | 160965118 | -0.07600 | 0.00006 | 0.00188 | excluded | K562 | U2AF2 | |
SE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952909 | 160953000 | | | 160952514 | 160952643 | 160955900 | 160955979 | -0.06700 | 0.00378 | 0.05789 | excluded | K562 | U2AF2 | |
A3SS | NMD3 | ENSG00000169251.8 | chr3 | + | 160952909 | 160953000 | | | 160952945 | 160953000 | 160952568 | 160952643 | -0.09900 | 0.00015 | 0.01201 | shorter | K562 | SF3B4 | |
A5SS | NMD3 | ENSG00000169251.8 | chr3 | + | 160939095 | 160939292 | | | 160939095 | 160939197 | 160939781 | 160939928 | 0.06100 | 0.00000 | 0.00000 | longer | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160960295 | 160960441 | 160964123 | 160964236 | 160951186 | 160951267 | 160965045 | 160965118 | 0.14300 | 0.00000 | 0.00000 | 1included | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952494 | 160952643 | 160952909 | 160953000 | 160951186 | 160951267 | 160955900 | 160955979 | 0.05300 | 0.00001 | 0.00014 | 1included | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952487 | 160952643 | 160952909 | 160953000 | 160951186 | 160951267 | 160955900 | 160955979 | 0.07800 | 0.00000 | 0.00000 | 1included | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160951146 | 160951267 | 160952909 | 160953000 | 160945034 | 160945131 | 160955900 | 160955979 | 0.05900 | 0.00000 | 0.00000 | 1included | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160939781 | 160939845 | 160942717 | 160942935 | 160939075 | 160939119 | 160945034 | 160945131 | -0.06700 | 0.00031 | 0.00328 | 2included | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952514 | 160952643 | 160955833 | 160955979 | 160951186 | 160951267 | 160960295 | 160960441 | -0.06100 | 0.00000 | 0.00000 | 2included | K562 | AQR | |
MXE | NMD3 | ENSG00000169251.8 | chr3 | + | 160952514 | 160952643 | 160952909 | 160953000 | 160951186 | 160951267 | 160955900 | 160955979 | -0.14000 | 0.00147 | 0.07617 | 2included | K562 | SERBP1 | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for NMD3 is not avaliable on ENCORE database.