MAP1LC3B

General Information

Gene Name       : MAP1LC3B
Gene ID             : ENSG00000140941.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MAP1LC3B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MAP1LC3BENSG00000140941.1217.0814.9616.02ENCSR000AEF
HepG2MAP1LC3BENSG00000140941.1224.4039.3131.86ENCSR985KAT
K562MAP1LC3BENSG00000140941.1257.7454.7956.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MAP1LC3B is not avaliable on ENCORE database.



Proteins bound to RNA
  • MAP1LC3B RNA is bound by 22 proteins.  







eCLIP assay for MAP1LC3B is not avaliable on ENCORE database.





22 proteins are bound to MAP1LC3B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168743806287438121+3'-UTR3.8153113.72241K562YBX3
chr168743701487437057+3'-UTR4.170983.74511K562IGF2BP1
chr168743747287437512+3'-UTR3.199268.06227K562YBX3
chr168743577787435850+3'-UTR,CDS,intron-Proximal4.534555.03605K562PUM1
chr168743758687437614+3'-UTR4.4134922.99581K562YBX3
chr168743665187436696+3'-UTR,CDS5.0167612.33415K562RPS3
chr168743795387438056+3'-UTR5.1546620.23853K562UPF1
chr168743816687438243+3'-UTR4.374335.48238K562IGF2BP1
chr168743748287437539+3'-UTR3.294444.77875HepG2SUB1
chr168743757187437586+3'-UTR3.9944014.34728K562YBX3
chr168743806287438112+3'-UTR3.140896.46691K562UPF1
chr168743242087432481+3'-UTR,CDS,intron-Proximal3.345846.67170K562ZNF622
chr168743658687436697+3'-UTR,CDS3.011694.32672K562ZNF622
chr168743751787437536+3'-UTR3.5730110.99974K562YBX3
chr168743767487437781+3'-UTR4.4597211.16007K562IGF2BP1
chr168743753687437559+3'-UTR3.9613412.97270K562YBX3
chr168743814287438192+3'-UTR4.048146.92152K562PABPC4
chr168743826887438313+3'-UTR3.624144.93097K562YBX3
chr168743675387436835+3'-UTR3.178295.39469K562IGF2BP1
chr168743798187438031+3'-UTR3.652755.47138HepG2SUB1
chr168743783787437868+3'-UTR3.163895.78757K562UPF1
chr168743806887438131+3'-UTR3.337044.18090K562IGF2BP2
chr168743732987437382+3'-UTR3.485726.98582K562UPF1
chr168743815487438202+3'-UTR3.3446010.34103K562PUM2
chr168743767387437757+3'-UTR4.796976.52213HepG2UPF1
chr168743792587437953+3'-UTR3.431675.44101K562UPF1
chr168742623087426383+5'-UTR,CDS,intron-Distal3.254643.25488HepG2XRN2
chr168742621687426325+5'-UTR,CDS,intron-Distal3.219684.26847HepG2NKRF
chr168742594187426003+5'-UTR3.102516.91015HepG2GRWD1
chr168742645887426529+5'-UTR,intron-Distal3.281343.74491K562CSTF2T
chr168742594287425993+5'-UTR3.663717.07280K562PUM1
chr168742597287426074+5'-UTR,CDS,intron-Proximal3.142358.39218K562UCHL5
chr168742594187426056+5'-UTR,CDS4.6878723.96170K562DDX3X
chr168742594587426085+5'-UTR,CDS,intron-Proximal3.423004.70792K562GEMIN5
chr168742599387426049+5'-UTR,CDS4.4976411.75386K562PUM1
chr168742604987426128+CDS,intron-Proximal4.232678.11807HepG2PRPF8
chr168742613487426191+CDS,intron-Distal,intron-Proximal5.004253.65355K562EFTUD2
chr168742604987426074+CDS,intron-Proximal3.711375.97026K562PUM1
chr168742612787426223+CDS,intron-Distal,intron-Proximal4.836173.90626K562XRN2
chr168742611187426170+CDS,intron-Proximal4.434099.49243HepG2EFTUD2
chr168742615887426199+CDS,intron-Distal,intron-Proximal4.858186.40474K562GEMIN5
chr168742609287426195+CDS,intron-Distal,intron-Proximal3.392404.48980K562PRPF8
chr168743228287432343+intron-Distal,intron-Proximal3.784825.84654K562U2AF1
chr168743026687430392+intron-Distal3.998644.05367K562ILF3
chr168743228087432375+intron-Distal,intron-Proximal3.713597.79272K562U2AF2
chr168743228087432371+intron-Distal,intron-Proximal4.750399.99997HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MAP1LC3B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MAP1LC3B is not available on ENCORE database.

  • 114 RBPs can affect the levels of MAP1LC3B.  








The Knockdown/knockout RNA-Seq assay for MAP1LC3B is not available on ENCORE database.





114 RBPs can affect the gene expression of MAP1LC3B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MAP1LC3BENSG00000140941.83974.144601695.694001.2287075.6623073.61080HepG2ACO1
MAP1LC3BENSG00000140941.82670.209901879.231300.506704.634703.29980HepG2AKAP8
MAP1LC3BENSG00000140941.82653.727401703.646000.6393016.2100014.56420HepG2AKAP8L
MAP1LC3BENSG00000140941.83330.085002442.910800.446902.633701.86790HepG2ASCC1
MAP1LC3BENSG00000140941.84019.447002502.510100.6835019.5253018.00610HepG2AUH
MAP1LC3BENSG00000140941.84799.899801789.337601.4235045.5148043.65310HepG2BOP1
MAP1LC3BENSG00000140941.82569.454601632.703400.6541012.4522011.01000HepG2CALR
MAP1LC3BENSG00000140941.82825.597102320.934200.283802.023001.35520HepG2CIRBP
MAP1LC3BENSG00000140941.82047.745701695.307700.272404.169803.38550HepG2CKAP4
MAP1LC3BENSG00000140941.81179.418701642.71150-0.478004.522703.66130HepG2CPSF6
MAP1LC3BENSG00000140941.82020.910201567.568200.366403.835602.53870HepG2CPSF7
MAP1LC3BENSG00000140941.8576.256101022.25130-0.827008.004406.33250HepG2CSTF2
MAP1LC3BENSG00000140941.82617.201302173.611000.267803.420802.72220HepG2CELF1
MAP1LC3BENSG00000140941.81869.523602337.12980-0.322105.979804.94760HepG2DAZAP1
MAP1LC3BENSG00000140941.8931.478401568.26580-0.7516021.3373019.54060HepG2DDX19B
MAP1LC3BENSG00000140941.83887.638902828.228800.458904.321003.55360HepG2DDX3X
MAP1LC3BENSG00000140941.81991.585101626.730200.291802.076101.39610HepG2DDX55
MAP1LC3BENSG00000140941.83451.708901865.418900.887706.734305.24460HepG2DDX59
MAP1LC3BENSG00000140941.82190.759201737.591800.334202.741101.73320HepG2DDX5
MAP1LC3BENSG00000140941.85617.619802429.518901.2092022.4331020.90220HepG2DDX6
MAP1LC3BENSG00000140941.82048.025401384.448900.5648010.723309.41360HepG2DNAJC21
MAP1LC3BENSG00000140941.81262.987301001.299200.334902.358401.33740HepG2EFTUD2
MAP1LC3BENSG00000140941.81470.465801121.014200.391402.319101.31170HepG2AGO1
MAP1LC3BENSG00000140941.8945.101902581.04460-1.4494027.9505025.95180HepG2EIF4A3
MAP1LC3BENSG00000140941.81704.882102305.75270-0.435606.353705.17690HepG2EIF4G1
MAP1LC3BENSG00000140941.83942.889902873.116500.456504.596303.85710HepG2ETF1
MAP1LC3BENSG00000140941.82906.432301656.980200.810604.246103.21060HepG2EWSR1
MAP1LC3BENSG00000140941.81467.127701160.148600.338602.890001.72250HepG2FASTKD2
MAP1LC3BENSG00000140941.81002.926501341.24260-0.419404.063803.11850HepG2FUBP3
MAP1LC3BENSG00000140941.8856.204501567.97810-0.872908.136506.32660HepG2FUS
MAP1LC3BENSG00000140941.82395.247001862.147300.363102.617301.99210HepG2GPKOW
MAP1LC3BENSG00000140941.82391.474901502.890800.670104.145702.41620HepG2HLTF
MAP1LC3BENSG00000140941.82672.184902147.906400.315004.834603.65320HepG2HNRNPA2B1
MAP1LC3BENSG00000140941.82435.917002128.935600.194202.674602.01130HepG2HNRNPL
MAP1LC3BENSG00000140941.81265.633901544.36040-0.287102.826002.21250HepG2HNRNPU
MAP1LC3BENSG00000140941.83964.479402455.556500.691009.367008.20650HepG2IGF2BP2
MAP1LC3BENSG00000140941.81327.884401577.52330-0.248502.229101.56350HepG2ILF2
MAP1LC3BENSG00000140941.83289.258902255.690800.544103.792702.21660HepG2ILF3
MAP1LC3BENSG00000140941.81624.419101207.683700.427604.130702.14460HepG2CCAR2
MAP1LC3BENSG00000140941.84688.023702528.320700.8907011.201609.52360HepG2LARP4
MAP1LC3BENSG00000140941.81666.763101020.459000.707703.012101.91290HepG2METAP2
MAP1LC3BENSG00000140941.82770.954702159.467700.359603.321501.57130HepG2NUP35
MAP1LC3BENSG00000140941.84568.729902114.691801.1112010.619808.84810HepG2PABPC1
MAP1LC3BENSG00000140941.81463.904702300.85250-0.6523016.9752015.67690HepG2PCBP1
MAP1LC3BENSG00000140941.82368.444601484.315200.674005.146303.76430HepG2PCBP2
MAP1LC3BENSG00000140941.81002.873601377.45650-0.457905.882404.83790HepG2PPIL4
MAP1LC3BENSG00000140941.81610.617801255.325100.359502.995302.15710HepG2PRPF8
MAP1LC3BENSG00000140941.82687.964602212.261600.280902.480801.91230HepG2PUF60
MAP1LC3BENSG00000140941.82887.468802348.424800.298006.072805.26460HepG2PUM1
MAP1LC3BENSG00000140941.83442.430902346.702300.5527010.205008.96040HepG2PUM2
MAP1LC3BENSG00000140941.81966.702801727.171700.187302.016401.47170HepG2PUS1
MAP1LC3BENSG00000140941.8664.449601432.38160-1.108209.085107.85530HepG2RAVER1
MAP1LC3BENSG00000140941.82544.046602126.578500.258502.377001.57640HepG2RBM15
MAP1LC3BENSG00000140941.86421.761302401.414601.4190083.1943081.13750HepG2RBM22
MAP1LC3BENSG00000140941.84434.726302605.534200.7672028.2169026.86100HepG2NELFE
MAP1LC3BENSG00000140941.81669.600502426.69820-0.5395012.2278011.07170HepG2RECQL
MAP1LC3BENSG00000140941.82797.145202148.179300.380703.716302.94360HepG2RPLP0
MAP1LC3BENSG00000140941.81294.23310948.654600.448004.676303.90000HepG2RPS19
MAP1LC3BENSG00000140941.81959.229201241.819000.657707.318306.11200HepG2RRP9
MAP1LC3BENSG00000140941.8999.790701375.35660-0.460105.964105.07400HepG2SAFB2
MAP1LC3BENSG00000140941.82995.607501990.422300.589703.261602.52870HepG2SF3A3
MAP1LC3BENSG00000140941.83022.491701758.962400.7809013.4317011.99740HepG2SF3B1
MAP1LC3BENSG00000140941.83152.588402437.496400.371006.830105.96690HepG2SF3B4
MAP1LC3BENSG00000140941.84343.446601957.152901.150004.522003.51290HepG2SNRNP70
MAP1LC3BENSG00000140941.85937.790302712.346301.1303076.8568075.14760HepG2SRFBP1
MAP1LC3BENSG00000140941.8794.665501549.52420-0.963407.684005.17180HepG2SRP68
MAP1LC3BENSG00000140941.83713.339101892.640100.972204.016202.78700HepG2SRSF3
MAP1LC3BENSG00000140941.82760.489702184.299800.337705.671804.82190HepG2SRSF5
MAP1LC3BENSG00000140941.82695.713401959.181400.460309.522208.36460HepG2SRSF7
MAP1LC3BENSG00000140941.85477.424402069.855001.4039063.7563061.83380HepG2SRSF9
MAP1LC3BENSG00000140941.81393.733902038.63290-0.548604.895203.23560HepG2SSRP1
MAP1LC3BENSG00000140941.81876.474901283.855500.547404.375502.85200HepG2STAU1
MAP1LC3BENSG00000140941.83247.131202020.317900.684506.493204.74380HepG2STIP1
MAP1LC3BENSG00000140941.82352.964001338.599500.813707.305605.40450HepG2SUB1
MAP1LC3BENSG00000140941.83340.107602064.365500.694106.718104.68090HepG2SUGP2
MAP1LC3BENSG00000140941.81654.590601297.897200.350203.547702.49240HepG2SUPT6H
MAP1LC3BENSG00000140941.84757.556701619.510801.5546039.0574037.09780HepG2SUPV3L1
MAP1LC3BENSG00000140941.81894.060202286.83790-0.271903.113802.52410HepG2TAF15
MAP1LC3BENSG00000140941.81405.918601732.08840-0.301002.237301.57550HepG2TARDBP
MAP1LC3BENSG00000140941.81229.006302002.41830-0.704303.330802.16280HepG2TBRG4
MAP1LC3BENSG00000140941.81506.243901085.578000.472403.895702.73560HepG2TFIP11
MAP1LC3BENSG00000140941.84421.877301644.103201.4273023.8845021.97720HepG2U2AF1
MAP1LC3BENSG00000140941.83883.737801916.309101.019003.414002.31320HepG2U2AF2
MAP1LC3BENSG00000140941.83084.808102287.719200.431203.498602.55320HepG2UBE2L3
MAP1LC3BENSG00000140941.82041.429801765.200600.209602.453101.78870HepG2UPF1
MAP1LC3BENSG00000140941.81938.754101704.231300.185902.041401.51080HepG2UTP3
MAP1LC3BENSG00000140941.81205.198401594.22690-0.403602.187501.53650HepG2XRN2
MAP1LC3BENSG00000140941.81867.326601470.973500.344104.771303.92910HepG2ZC3H8
MAP1LC3BENSG00000140941.82321.544101941.382300.257904.277803.63710HepG2ZNF622
MAP1LC3BENSG00000140941.82429.871701697.522400.517306.590204.71850K562AARS
MAP1LC3BENSG00000140941.85032.803203991.669900.334306.770805.94040K562AGGF1
MAP1LC3BENSG00000140941.85714.291204386.133900.381504.286203.00660K562AKAP8
MAP1LC3BENSG00000140941.85094.209004153.486900.294402.757702.10550K562AKAP8L
MAP1LC3BENSG00000140941.82902.487103632.01780-0.323503.379602.00490K562APOBEC3C
MAP1LC3BENSG00000140941.87161.103904112.356200.8001016.5336015.25740K562AQR
MAP1LC3BENSG00000140941.82149.529402964.76880-0.463902.395601.41910K562CNOT7
MAP1LC3BENSG00000140941.82516.318603064.20890-0.284203.881702.56340K562CPEB4
MAP1LC3BENSG00000140941.81335.170802068.88570-0.6318010.322308.79300K562CPSF6
MAP1LC3BENSG00000140941.81186.141501505.97290-0.344403.645602.40820K562CSTF2
MAP1LC3BENSG00000140941.84238.123305061.70790-0.256203.105802.07330K562CELF1
MAP1LC3BENSG00000140941.82246.239103170.45320-0.4972011.137409.92700K562DDX47
MAP1LC3BENSG00000140941.81328.639201852.27000-0.479303.505702.32880K562EIF3D
MAP1LC3BENSG00000140941.81387.478202184.80490-0.6550013.8484012.02650K562EIF3G
MAP1LC3BENSG00000140941.81444.944602105.15690-0.542906.460705.21370K562EIF4A3
MAP1LC3BENSG00000140941.8689.251301148.19010-0.736303.692601.39700K562EIF4G1
MAP1LC3BENSG00000140941.82863.998204116.23640-0.5233012.2781010.37580K562EIF4G2
MAP1LC3BENSG00000140941.82988.578802053.836400.541004.224203.30910K562G3BP2
MAP1LC3BENSG00000140941.82018.009302482.40660-0.298802.918701.81510K562HNRNPA1
MAP1LC3BENSG00000140941.81265.451601658.47690-0.390203.869902.49460K562HNRNPF
MAP1LC3BENSG00000140941.82317.299402865.29550-0.306202.955101.85900K562HNRNPL
MAP1LC3BENSG00000140941.83635.768702980.892400.286402.356601.61820K562HSPD1
MAP1LC3BENSG00000140941.85139.291304407.980800.221402.013801.31860K562KIF1C
MAP1LC3BENSG00000140941.85437.733204219.446800.365904.250702.83590K562MAK16
MAP1LC3BENSG00000140941.86092.345604938.038900.303003.157402.17440K562MBNL1
MAP1LC3BENSG00000140941.82102.777902524.75110-0.263802.989402.14990K562MTPAP
MAP1LC3BENSG00000140941.85125.070903461.199500.566204.932603.64310K562NAA15
MAP1LC3BENSG00000140941.82344.428002805.11930-0.258804.573503.64300K562NSUN2
MAP1LC3BENSG00000140941.81983.879902848.27490-0.521802.860001.60370K562PABPC1
MAP1LC3BENSG00000140941.82254.358401683.244700.421404.107203.19320K562PRPF8
MAP1LC3BENSG00000140941.86162.651104491.060600.456405.830504.64920K562PUF60
MAP1LC3BENSG00000140941.83620.971504680.44430-0.370306.810105.28480K562PUM2
MAP1LC3BENSG00000140941.86202.695604119.309700.590408.660107.74810K562PUS1
MAP1LC3BENSG00000140941.81328.685301959.49610-0.560503.405201.80040K562RAVER1
MAP1LC3BENSG00000140941.84804.824904013.489000.259503.199202.56910K562RBM15
MAP1LC3BENSG00000140941.81821.021902151.68730-0.240703.290501.56430K562RPS10
MAP1LC3BENSG00000140941.81285.185301714.73860-0.416002.791901.97180K562RPS19
MAP1LC3BENSG00000140941.84170.265602641.633800.658602.440901.34090K562SF1
MAP1LC3BENSG00000140941.82323.175302768.09440-0.252802.939702.10190K562SF3A3
MAP1LC3BENSG00000140941.82829.496902135.120400.406102.842701.97620K562SF3B4
MAP1LC3BENSG00000140941.81082.932501680.61840-0.634007.432404.59280K562SRP68
MAP1LC3BENSG00000140941.82403.451102835.98670-0.238703.626602.57120K562SRPK2
MAP1LC3BENSG00000140941.82375.664202835.31170-0.255202.308401.65510K562SRSF1
MAP1LC3BENSG00000140941.82646.585401990.263500.411102.684501.61120K562U2AF1
MAP1LC3BENSG00000140941.82744.904002055.695900.417005.644104.49640K562U2AF2
MAP1LC3BENSG00000140941.82637.884602974.33590-0.173201.915401.30970K562UPF1
MAP1LC3BENSG00000140941.82048.615302646.63160-0.369507.417506.09580K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MAP1LC3B is not available on ENCORE database.






No RBPs affect the alternative splcing events of MAP1LC3B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for MAP1LC3B is not avaliable on ENCORE database.