LIMK1

General Information

Gene Name       : LIMK1
Gene ID             : ENSG00000106683.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LIMK1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LIMK1ENSG00000106683.146.6022.4714.54ENCSR000AEF
HepG2LIMK1ENSG00000106683.1421.317.4614.38ENCSR985KAT
K562LIMK1ENSG00000106683.1426.6316.4621.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LIMK1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LIMK1 RNA is bound by 8 proteins.  







eCLIP assay for LIMK1 is not avaliable on ENCORE database.





8 proteins are bound to LIMK1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77352336073523456+3'-UTR,CDS,intron-Proximal3.515954.35635K562PRPF8
chr77353629473536372+3'-UTR5.461218.40676K562UPF1
chr77353664973536721+3'-UTR4.669724.69686K562DDX55
chr77353629673536392+3'-UTR4.099013.45012HepG2UPF1
chr77353663873536698+3'-UTR3.647725.24187K562DDX6
chr77353664173536706+3'-UTR4.302667.89119K562UPF1
chr77353664173536691+3'-UTR4.8934410.44987K562PABPC4
chr77353655673536610+3'-UTR3.970034.13936K562PUM2
chr77351107073511131+CDS,intron-Proximal3.891223.86479HepG2PRPF8
chr77350015073500209+CDS,intron-Proximal3.633943.71591HepG2PRPF8
chr77351142973511513+CDS3.036323.67697K562YBX3
chr77351356773513619+CDS,intron-Proximal5.103316.75320K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LIMK1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LIMK1 is not available on ENCORE database.

  • 122 RBPs can affect the levels of LIMK1.  








The Knockdown/knockout RNA-Seq assay for LIMK1 is not available on ENCORE database.





122 RBPs can affect the gene expression of LIMK1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LIMK1ENSG00000106683.10996.73960394.675701.3364013.8785012.78280HepG2AKAP1
LIMK1ENSG00000106683.10755.63480563.866000.422202.897002.11300HepG2AKAP8L
LIMK1ENSG00000106683.10495.67790326.516200.602102.088601.40190HepG2ASCC1
LIMK1ENSG00000106683.10689.49760364.756600.918504.585503.37730HepG2BCCIP
LIMK1ENSG00000106683.101118.45870828.280800.433202.497301.57850HepG2CCAR1
LIMK1ENSG00000106683.10893.77720440.126601.0219020.5096019.08700HepG2CELF1
LIMK1ENSG00000106683.10621.61580473.243700.393303.689002.85340HepG2DAZAP1
LIMK1ENSG00000106683.10688.64320519.032300.407804.442103.41670HepG2DDX19B
LIMK1ENSG00000106683.10561.87480377.973200.571902.018901.47550HepG2DDX3X
LIMK1ENSG00000106683.10530.36000369.543100.521103.773602.20450HepG2DDX52
LIMK1ENSG00000106683.10667.23400358.662400.895504.552503.58670HepG2DDX55
LIMK1ENSG00000106683.10857.19470324.913501.3995013.9532012.70120HepG2DDX6
LIMK1ENSG00000106683.10180.96830323.80180-0.839406.007504.60090HepG2DHX30
LIMK1ENSG00000106683.10410.12090536.90190-0.388602.864502.17630HepG2DKC1
LIMK1ENSG00000106683.10519.35790335.704500.629402.847102.13700HepG2DNAJC21
LIMK1ENSG00000106683.10532.93230332.804400.679205.257704.40390HepG2DNAJC2
LIMK1ENSG00000106683.10550.93200312.122300.819703.290402.64780HepG2EIF2S1
LIMK1ENSG00000106683.10540.43930344.822900.648202.809302.16520HepG2EIF4A3
LIMK1ENSG00000106683.10898.09490335.941301.4186011.119109.78480HepG2EIF4B
LIMK1ENSG00000106683.10873.10190548.427400.670707.736906.34700HepG2EWSR1
LIMK1ENSG00000106683.101230.36740824.782900.576904.338003.39110HepG2FIP1L1
LIMK1ENSG00000106683.10208.26660646.43430-1.634109.937508.03790HepG2FTO
LIMK1ENSG00000106683.10537.19010327.311500.714703.583902.31380HepG2FUS
LIMK1ENSG00000106683.10790.25910348.241201.1821012.3196010.96640HepG2FXR1
LIMK1ENSG00000106683.10465.89990322.871600.529001.932501.37150HepG2G3BP1
LIMK1ENSG00000106683.10486.38170318.568100.610404.181503.06810HepG2GEMIN5
LIMK1ENSG00000106683.10441.48740731.47570-0.728405.983905.06740HepG2GPKOW
LIMK1ENSG00000106683.10680.48850535.798600.344802.973301.96460HepG2HDGF
LIMK1ENSG00000106683.10693.73470327.341201.083506.371405.34280HepG2HNRNPK
LIMK1ENSG00000106683.10499.88920698.06340-0.481703.270902.59330HepG2HNRNPLL
LIMK1ENSG00000106683.10735.16310568.950700.369702.412601.52360HepG2HNRNPM
LIMK1ENSG00000106683.10614.11760374.514600.713407.408206.45360HepG2HNRNPU
LIMK1ENSG00000106683.10597.50590782.64900-0.389402.813002.08280HepG2IGF2BP1
LIMK1ENSG00000106683.10770.48280328.130301.2314014.8186013.39640HepG2IGF2BP2
LIMK1ENSG00000106683.10656.27940382.550600.7786010.293308.97120HepG2ILF2
LIMK1ENSG00000106683.10524.67030330.158200.668202.688301.70250HepG2KHSRP
LIMK1ENSG00000106683.10408.99000513.02310-0.327002.443301.48380HepG2KIF1C
LIMK1ENSG00000106683.101180.72540875.149900.432002.542301.74770HepG2LARP4
LIMK1ENSG00000106683.10544.51040320.647600.763904.049302.66770HepG2LARP7
LIMK1ENSG00000106683.10637.72950350.260500.864405.152504.31630HepG2MATR3
LIMK1ENSG00000106683.10630.09550374.445500.750704.029902.77160HepG2METAP2
LIMK1ENSG00000106683.10879.56580667.344100.398302.824302.00750HepG2MSI2
LIMK1ENSG00000106683.10379.36050711.99740-0.908306.061904.60090HepG2MTPAP
LIMK1ENSG00000106683.10832.27380469.267500.826503.313102.47990HepG2NOL12
LIMK1ENSG00000106683.10222.63170618.98780-1.4753019.3172017.56910HepG2NSUN2
LIMK1ENSG00000106683.10498.04920310.816000.680102.702801.82620HepG2PABPC1
LIMK1ENSG00000106683.10479.12680319.038600.586602.464301.77920HepG2PABPC4
LIMK1ENSG00000106683.10434.72090295.906900.554803.988402.50550HepG2PKM
LIMK1ENSG00000106683.10521.97900334.033300.643906.544805.44710HepG2PPIL4
LIMK1ENSG00000106683.10411.15930560.49780-0.447003.896902.99420HepG2PRPF4
LIMK1ENSG00000106683.10750.28870333.406601.1701023.1909021.89930HepG2PTBP1
LIMK1ENSG00000106683.10568.62110447.957000.344002.009301.49000HepG2PUF60
LIMK1ENSG00000106683.10347.46080475.52620-0.452703.802203.13070HepG2PUM1
LIMK1ENSG00000106683.10859.58510475.178800.8551012.4345011.07370HepG2PUM2
LIMK1ENSG00000106683.10676.41280361.058700.9056011.9843010.81830HepG2QKI
LIMK1ENSG00000106683.101088.56540795.254100.452804.247003.21190HepG2RBM15
LIMK1ENSG00000106683.101502.80870725.976401.0496019.4964018.37830HepG2RBM22
LIMK1ENSG00000106683.10434.82360327.694900.408002.358401.73020HepG2RBM25
LIMK1ENSG00000106683.10634.86210386.677700.715203.473002.35480HepG2RBM27
LIMK1ENSG00000106683.10721.28390371.038300.9589015.0066013.93570HepG2NELFE
LIMK1ENSG00000106683.10528.59520345.592200.613005.933705.07790HepG2RECQL
LIMK1ENSG00000106683.10792.91290348.210101.1871018.6175017.23090HepG2RPS19
LIMK1ENSG00000106683.10662.83190356.569100.894403.902002.95780HepG2RPS2
LIMK1ENSG00000106683.10669.59990364.033800.879106.042804.44750HepG2RPS5
LIMK1ENSG00000106683.10713.25040333.509201.0966022.1770020.60110HepG2SAFB2
LIMK1ENSG00000106683.10541.66590690.92810-0.351102.015401.40830HepG2SF3B1
LIMK1ENSG00000106683.10735.65430347.095001.0836019.1819017.84790HepG2SF3B4
LIMK1ENSG00000106683.10578.45470429.521200.429403.972003.15430HepG2SLBP
LIMK1ENSG00000106683.10797.51600388.906901.0360023.0809021.51240HepG2SMN1
LIMK1ENSG00000106683.10641.98710305.560101.071009.568007.72280HepG2SMNDC1
LIMK1ENSG00000106683.10221.86240768.78470-1.7929020.5169018.45450HepG2SNRNP70
LIMK1ENSG00000106683.101449.07420819.939300.8214020.3003019.26990HepG2SRFBP1
LIMK1ENSG00000106683.10541.52480743.48870-0.457302.487401.54370HepG2SRSF3
LIMK1ENSG00000106683.10936.18600442.292401.0817018.6197017.19780HepG2SRSF5
LIMK1ENSG00000106683.10413.01040294.760500.486503.828403.20080HepG2SRSF9
LIMK1ENSG00000106683.10330.51880711.85900-1.1069013.7397012.77200HepG2SSB
LIMK1ENSG00000106683.10501.58360297.481900.753602.959501.81850HepG2STIP1
LIMK1ENSG00000106683.10997.96190503.008200.9883023.5617022.03750HepG2SUCLG1
LIMK1ENSG00000106683.10930.94860680.472700.452103.545002.73670HepG2TARDBP
LIMK1ENSG00000106683.10457.85480239.251800.936306.481405.06580HepG2TFIP11
LIMK1ENSG00000106683.10546.47560367.169100.573603.956203.30550HepG2TRIM56
LIMK1ENSG00000106683.10762.72550411.158400.891402.449901.52780HepG2U2AF2
LIMK1ENSG00000106683.101130.68830463.230101.287304.482003.39890HepG2UBE2L3
LIMK1ENSG00000106683.10761.99100583.049100.386103.865503.06050HepG2UPF1
LIMK1ENSG00000106683.10772.66990599.295600.366503.352702.21290HepG2UTP18
LIMK1ENSG00000106683.10739.63620562.911600.393803.786503.10310HepG2UTP3
LIMK1ENSG00000106683.10636.73690328.750400.953606.189704.64720HepG2XRCC6
LIMK1ENSG00000106683.10254.13340351.42370-0.467602.255101.59480HepG2XRN2
LIMK1ENSG00000106683.10328.54130553.15060-0.751609.732808.60130HepG2ZC3H8
LIMK1ENSG00000106683.101400.12010641.242901.1265041.2803039.81370HepG2ZNF622
LIMK1ENSG00000106683.101175.64640732.391300.6827012.2774011.17580K562AGGF1
LIMK1ENSG00000106683.10582.33770868.39340-0.576505.232204.46980K562AQR
LIMK1ENSG00000106683.10574.32040419.932700.451604.171701.59630K562ASCC1
LIMK1ENSG00000106683.10965.46400799.593700.271902.109301.31950K562ATP5C1
LIMK1ENSG00000106683.10686.08720463.675900.565202.626201.69370K562BCLAF1
LIMK1ENSG00000106683.101245.80160875.267900.509206.062304.28640K562CCDC124
LIMK1ENSG00000106683.101497.29390990.400600.5962010.379508.24660K562CPEB4
LIMK1ENSG00000106683.101197.78420859.294900.479004.278702.43520K562DDX19B
LIMK1ENSG00000106683.10709.99130436.267300.702504.064501.55830K562DDX28
LIMK1ENSG00000106683.10586.20610435.443300.428803.101301.99340K562DDX3X
LIMK1ENSG00000106683.10696.58000441.044300.659304.936502.70400K562DDX51
LIMK1ENSG00000106683.10587.60680441.479100.412403.320701.85440K562DDX6
LIMK1ENSG00000106683.101118.27330820.091700.447305.410004.13070K562DKC1
LIMK1ENSG00000106683.10652.28750478.285000.447504.313902.77760K562EIF2S1
LIMK1ENSG00000106683.10914.45550676.196400.435402.522601.82980K562EIF2S2
LIMK1ENSG00000106683.10638.47710454.926300.488903.730802.78280K562EIF4A3
LIMK1ENSG00000106683.10808.22970409.681600.9802017.6963014.76740K562EIF4B
LIMK1ENSG00000106683.10640.95720397.101500.690607.561105.19860K562EWSR1
LIMK1ENSG00000106683.10362.06710589.71370-0.703805.600203.88910K562FKBP4
LIMK1ENSG00000106683.10318.83450437.46530-0.456402.340301.50460K562FTO
LIMK1ENSG00000106683.1056.00750146.42920-1.386503.520702.70240K562G3BP2
LIMK1ENSG00000106683.10657.09140409.193400.683204.932103.01440K562GEMIN5
LIMK1ENSG00000106683.10859.58030314.114701.452204.812903.30100K562IGF2BP2
LIMK1ENSG00000106683.10520.95370319.419600.705606.477704.53470K562IGF2BP3
LIMK1ENSG00000106683.10803.18220605.455000.407602.944301.36550K562LSM11
LIMK1ENSG00000106683.10581.38090329.930200.817208.862507.31410K562MAGOH
LIMK1ENSG00000106683.10452.58520329.231600.459003.042802.07250K562MATR3
LIMK1ENSG00000106683.101380.67550906.034000.607608.076306.35760K562MBNL1
LIMK1ENSG00000106683.10696.57700472.688900.559304.799703.62630K562METAP2
LIMK1ENSG00000106683.10801.233601005.93930-0.328203.882203.01580K562NSUN2
LIMK1ENSG00000106683.10458.29770293.521100.642703.722802.58970K562PCBP2
LIMK1ENSG00000106683.10494.181201008.25400-1.028707.502106.13400K562PCBP3
LIMK1ENSG00000106683.10402.04040773.31580-0.943709.171607.74620K562POLR2G
LIMK1ENSG00000106683.10938.23420626.956500.581503.490102.55040K562PPIG
LIMK1ENSG00000106683.10499.06890320.562200.638505.721504.79550K562PTBP1
LIMK1ENSG00000106683.10928.591301371.13670-0.562307.732705.87210K562PUM1
LIMK1ENSG00000106683.10279.87030163.650100.774003.266101.32040K562QKI
LIMK1ENSG00000106683.10961.99340736.394700.385403.571902.91190K562RBM15
LIMK1ENSG00000106683.10588.35330307.275900.937008.110106.56960K562RBM22
LIMK1ENSG00000106683.10531.50090299.615700.826907.394604.91920K562RBM34
LIMK1ENSG00000106683.10572.19650404.446500.500502.569601.78360K562RPS19
LIMK1ENSG00000106683.10476.34020335.372200.506102.555501.59700K562RPS3
LIMK1ENSG00000106683.101259.25470992.605100.343203.549202.63360K562SF3A3
LIMK1ENSG00000106683.10335.04160152.055101.139603.628202.64490K562SF3B4
LIMK1ENSG00000106683.101100.72530617.209400.834503.952702.28220K562SFPQ
LIMK1ENSG00000106683.101255.74700811.349100.630104.154201.99370K562SMN1
LIMK1ENSG00000106683.10814.39660526.441900.629405.915304.25510K562SRFBP1
LIMK1ENSG00000106683.10559.11920396.735100.494903.042301.32680K562SRP68
LIMK1ENSG00000106683.101250.998101016.945400.298703.490102.45480K562SRPK2
LIMK1ENSG00000106683.10491.70590314.279400.645605.252404.28310K562SRSF1
LIMK1ENSG00000106683.10475.95370323.728000.555903.647402.41440K562SRSF4
LIMK1ENSG00000106683.10477.73010296.866600.686303.429802.23910K562SRSF5
LIMK1ENSG00000106683.10592.72400384.346300.624904.100002.84360K562SUPV3L1
LIMK1ENSG00000106683.10635.10490318.024800.997808.382407.06490K562TARDBP
LIMK1ENSG00000106683.10545.68680350.473000.638704.686802.53590K562TFIP11
LIMK1ENSG00000106683.10620.79950306.783001.016808.932607.34340K562TIA1
LIMK1ENSG00000106683.10863.89890585.197500.561802.618401.71000K562TIAL1
LIMK1ENSG00000106683.10556.09760301.155400.884708.823406.55240K562TRA2A
LIMK1ENSG00000106683.10890.06190621.952300.517004.507003.23330K562TRIM56
LIMK1ENSG00000106683.101510.208601204.585400.326103.245801.86490K562TROVE2
LIMK1ENSG00000106683.101312.515901066.618700.299203.406202.61450K562UPF1
LIMK1ENSG00000106683.101192.72190821.345900.538103.567202.19660K562UTP3
LIMK1ENSG00000106683.10610.10510414.468600.557703.744302.26130K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LIMK1 is not available on ENCORE database.





1 RBPs can affect the splicing of LIMK1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXELIMK1ENSG00000106683.10chr7+7351095173511090735114097351151973500077735001747351336173513568-0.240000.001420.045412includedHepG2HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LIMK1 is not avaliable on ENCORE database.