GLYCTK

General Information

Gene Name       : GLYCTK
Gene ID             : ENSG00000168237.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GLYCTK)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GLYCTKENSG00000168237.171.475.043.25ENCSR000AEF
HepG2GLYCTKENSG00000168237.1763.6221.8742.74ENCSR985KAT
K562GLYCTKENSG00000168237.173.222.032.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GLYCTK is not avaliable on ENCORE database.



Proteins bound to RNA
  • GLYCTK RNA is bound by 30 proteins.  







eCLIP assay for GLYCTK is not avaliable on ENCORE database.





30 proteins are bound to GLYCTK RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35232721352327273+3'-UTR,intron-Proximal4.9695716.81791HepG2XPO5
chr35232492652324985+3'-UTR,CDS,intron-Proximal4.0138614.34208HepG2SF3A3
chr35232672052326827+3'-UTR,CDS,intron-Distal3.741895.13857HepG2PABPN1
chr35232790952328003+3'-UTR4.338233.89149HepG2HNRNPK
chr35232713452327248+3'-UTR,CDS,intron-Proximal4.540968.85527HepG2DDX55
chr35232751152327579+3'-UTR3.461786.05630HepG2NKRF
chr35232496052325007+3'-UTR,CDS,intron-Proximal4.668549.01206HepG2U2AF2
chr35232585652325925+3'-UTR,CDS,intron-Distal3.521823.52724HepG2PABPN1
chr35232497552325001+3'-UTR,CDS,intron-Proximal3.8992811.27084HepG2PPIG
chr35232748952327568+3'-UTR,polyA_site3.540864.08242HepG2PTBP1
chr35232617552326284+3'-UTR,CDS,intron-Distal,intron-Proximal3.760008.11150HepG2PRPF4
chr35232586852325937+3'-UTR,CDS,intron-Distal3.4724914.03000HepG2PPIG
chr35232580052325881+3'-UTR,CDS,intron-Distal4.009627.89271HepG2SRSF1
chr35232855752328627+3'-UTR4.056588.81766HepG2XPO5
chr35232689252326948+3'-UTR,CDS,intron-Distal4.351303.19682HepG2PABPN1
chr35232668852326735+3'-UTR,CDS,intron-Distal3.8620611.65624HepG2XPO5
chr35232625252326279+3'-UTR,CDS,intron-Distal,intron-Proximal4.5655711.57554HepG2SF3A3
chr35232642052326463+3'-UTR,CDS,intron-Distal4.376604.49585HepG2LSM11
chr35232628452326327+3'-UTR,CDS,intron-Distal3.403483.72699HepG2PRPF4
chr35232907052329105+3'-UTR3.478323.96999HepG2CSTF2T
chr35232682652326864+3'-UTR,CDS,intron-Distal4.524764.35894HepG2RBM15
chr35232429752324422+5'-UTR,CDS,intron-Distal,intron-Proximal3.304757.41796HepG2EIF3H
chr35232570152325820+CDS,intron-Distal,intron-Proximal5.5012132.15275HepG2AQR
chr35232512552325177+CDS,intron-Proximal6.0442812.10660K562AQR
chr35232512652325158+CDS,intron-Proximal6.9309458.17549HepG2AQR
chr35232571152325816+CDS,intron-Distal,intron-Proximal3.5834531.53295HepG2BUD13
chr35232473252324776+CDS,intron-Distal,intron-Proximal3.052275.25840HepG2PRPF8
chr35232572852325809+CDS,intron-Distal,intron-Proximal5.153077.23718K562AQR
chr35232467852324736+CDS,intron-Distal,intron-Proximal4.7070325.01496HepG2PPIG
chr35232507252325172+CDS,intron-Proximal3.0803110.64290HepG2GRWD1
chr35232512452325191+CDS,intron-Proximal3.0284413.63918HepG2BUD13
chr35232582852325868+CDS,intron-Distal3.661919.02617HepG2PPIG
chr35232500752325068+CDS3.720819.81646HepG2GRWD1
chr35232504252325117+CDS3.7253215.63865HepG2PPIG
chr35232499852325072+CDS3.858173.58697HepG2UCHL5
chr35232510352325153+CDS,intron-Proximal4.2768033.42852HepG2PRPF8
chr35232512452325177+CDS,intron-Proximal3.1477112.61608HepG2PPIG
chr35232453652324586+CDS,intron-Distal3.056963.05085HepG2SRSF1
chr35232574352325803+CDS,intron-Distal,intron-Proximal3.334943.95156HepG2U2AF1
chr35232623252326252+intron-Distal,intron-Proximal4.7381610.59108HepG2SF3A3
chr35232525352325322+intron-Distal4.0033712.31390HepG2EFTUD2
chr35232418752324263+intron-Distal,intron-Proximal4.1242410.35705HepG2NCBP2
chr35232621352326267+intron-Distal,intron-Proximal4.640619.68645HepG2AQR
chr35232408952324168+intron-Distal3.471824.35138HepG2SRSF9
chr35232533752325408+intron-Distal4.5065414.56640HepG2RBFOX2
chr35232622252326274+intron-Distal,intron-Proximal3.8923913.51387HepG2SF3B4
chr35232420252324251+intron-Distal,intron-Proximal4.190234.82666HepG2DDX3X
chr35232570152325733+intron-Distal,intron-Proximal3.147366.29405HepG2PRPF8
chr35232525752325316+intron-Distal3.097245.00685HepG2ZC3H11A
chr35232408852324187+intron-Distal3.4991713.90201HepG2NCBP2
chr35232515352325173+intron-Proximal4.4323835.09134HepG2PRPF8
chr35232513452325191+intron-Proximal3.9028810.83535HepG2EFTUD2
chr35232515752325189+intron-Proximal4.478495.52571HepG2RBFOX2
chr35232517352325189+intron-Proximal4.8079724.55337HepG2PRPF8
chr35232512752325146+intron-Proximal3.142973.41602HepG2SUPV3L1
chr35232491652324932+intron-Proximal3.676234.76523HepG2SF3B4
chr35232517252325188+intron-Proximal3.479129.91091HepG2RBM22
chr35232515852325182+intron-Proximal7.8254154.32004HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GLYCTK is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GLYCTK is not available on ENCORE database.

  • 110 RBPs can affect the levels of GLYCTK.  








The Knockdown/knockout RNA-Seq assay for GLYCTK is not available on ENCORE database.





110 RBPs can affect the gene expression of GLYCTK :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GLYCTKENSG00000168237.13282.63480593.89870-1.071307.935006.23040HepG2AATF
GLYCTKENSG00000168237.131851.45820891.090101.0549015.8121013.89440HepG2ABCF1
GLYCTKENSG00000168237.13310.01040957.69550-1.6273027.8366026.37680HepG2ACO1
GLYCTKENSG00000168237.13358.117701703.24120-2.2498015.8349014.66900HepG2AKAP1
GLYCTKENSG00000168237.13564.95150296.075600.932103.545701.66230HepG2APOBEC3C
GLYCTKENSG00000168237.13864.442901508.92680-0.8037019.3497017.83960HepG2AUH
GLYCTKENSG00000168237.131303.03970741.466300.813303.159802.15830HepG2BCCIP
GLYCTKENSG00000168237.131015.91530644.099800.657302.247501.43760HepG2BCLAF1
GLYCTKENSG00000168237.13419.23600308.819600.440902.322401.76890HepG2BOP1
GLYCTKENSG00000168237.13515.91370667.38620-0.371402.777901.54230HepG2BUD13
GLYCTKENSG00000168237.13306.69360421.43190-0.458502.739301.97130HepG2CALR
GLYCTKENSG00000168237.13481.48270283.502200.764004.866403.97620HepG2CPSF6
GLYCTKENSG00000168237.13625.75530419.734100.576005.906804.42180HepG2YBX3
GLYCTKENSG00000168237.13305.15350608.43270-0.995604.739902.81230HepG2CSTF2T
GLYCTKENSG00000168237.13391.05130828.88920-1.0838020.5740019.14850HepG2CELF1
GLYCTKENSG00000168237.131163.12450891.151400.384205.661004.65390HepG2DAZAP1
GLYCTKENSG00000168237.131220.13920885.644300.462107.433506.17950HepG2DDX19B
GLYCTKENSG00000168237.131149.74100654.429300.8129011.3798010.11550HepG2DDX21
GLYCTKENSG00000168237.131282.37490681.966700.910905.279003.56520HepG2DDX27
GLYCTKENSG00000168237.131111.256401631.30310-0.553802.065601.51620HepG2DDX3X
GLYCTKENSG00000168237.13352.90580479.16830-0.441202.873701.49110HepG2DDX52
GLYCTKENSG00000168237.13875.15520587.014400.576005.124603.78250HepG2DDX5
GLYCTKENSG00000168237.13483.375001401.96630-1.536209.398408.33190HepG2DDX6
GLYCTKENSG00000168237.13817.38070397.508201.0399015.2394013.22830HepG2DHX30
GLYCTKENSG00000168237.132216.46890916.206201.2744026.9833025.41160HepG2DKC1
GLYCTKENSG00000168237.13538.79840412.135200.386502.862102.14990HepG2DNAJC21
GLYCTKENSG00000168237.13672.59330408.513700.7192011.3230010.10340HepG2DNAJC2
GLYCTKENSG00000168237.131026.13840571.652000.843909.413207.83900HepG2EEF2
GLYCTKENSG00000168237.13373.01610603.20790-0.693403.582802.31050HepG2AGO1
GLYCTKENSG00000168237.132443.676701488.401400.715205.516104.61450HepG2EIF4A3
GLYCTKENSG00000168237.131212.46770879.268600.463503.741802.79310HepG2EIF4G1
GLYCTKENSG00000168237.131256.96240842.266300.577506.232105.03330HepG2EIF4G2
GLYCTKENSG00000168237.131134.24150771.717100.555504.824603.42410HepG2ESF1
GLYCTKENSG00000168237.13458.63140624.00530-0.444202.566801.46090HepG2FASTKD2
GLYCTKENSG00000168237.13212.72970899.72460-2.0805022.6456020.82920HepG2FIP1L1
GLYCTKENSG00000168237.131343.31960833.808300.687903.694101.77320HepG2FMR1
GLYCTKENSG00000168237.13708.736401067.79680-0.591306.475805.30110HepG2FUBP3
GLYCTKENSG00000168237.132055.378101479.972800.473703.253302.28460HepG2G3BP2
GLYCTKENSG00000168237.13639.81870413.142800.630905.005103.80010HepG2GEMIN5
GLYCTKENSG00000168237.13667.95640321.341601.0555010.615709.41850HepG2GPKOW
GLYCTKENSG00000168237.13653.68400914.21050-0.483903.517702.42700HepG2HDGF
GLYCTKENSG00000168237.131328.91300416.083701.675208.357407.32290HepG2HNRNPA1
GLYCTKENSG00000168237.13883.42810462.822100.932606.975405.91600HepG2HNRNPC
GLYCTKENSG00000168237.131073.20010563.155300.9302018.3920016.75310HepG2HNRNPF
GLYCTKENSG00000168237.13958.135701412.14650-0.559602.285501.64720HepG2HNRNPK
GLYCTKENSG00000168237.13622.43400306.665001.0212010.601209.46410HepG2HNRNPLL
GLYCTKENSG00000168237.13683.64270459.761800.572307.016106.08670HepG2HNRNPU
GLYCTKENSG00000168237.131491.80310554.538301.4276038.6919036.48400HepG2IGF2BP1
GLYCTKENSG00000168237.131977.030701416.241100.481203.655802.88940HepG2IGF2BP2
GLYCTKENSG00000168237.13588.789701329.78550-1.175403.478202.37440HepG2IGF2BP3
GLYCTKENSG00000168237.13488.87850309.080000.661403.569802.04280HepG2ILF3
GLYCTKENSG00000168237.13462.70730302.172600.614603.556502.17280HepG2KHDRBS1
GLYCTKENSG00000168237.13971.58650545.178200.833507.513006.13220HepG2LARP4
GLYCTKENSG00000168237.131153.54460605.998400.928609.529107.39810HepG2LIN28B
GLYCTKENSG00000168237.132477.509001503.198000.720805.810504.87100HepG2MAGOH
GLYCTKENSG00000168237.13331.46490485.61910-0.551002.420801.43470HepG2METAP2
GLYCTKENSG00000168237.13506.99670312.824400.696502.489201.57360HepG2MTPAP
GLYCTKENSG00000168237.13443.37920611.28870-0.463303.732102.32060HepG2NAA15
GLYCTKENSG00000168237.13870.58300522.119900.737505.133203.18490HepG2NIP7
GLYCTKENSG00000168237.13728.04550426.679000.770804.724802.87690HepG2NOLC1
GLYCTKENSG00000168237.13448.54310271.939000.721905.093404.09120HepG2NSUN2
GLYCTKENSG00000168237.13564.98120346.847200.703803.700501.85480HepG2PA2G4
GLYCTKENSG00000168237.13316.65910455.07810-0.523204.248403.22600HepG2PARN
GLYCTKENSG00000168237.131111.689801481.56090-0.414406.256505.40050HepG2PCBP1
GLYCTKENSG00000168237.13504.29230383.740800.394002.565401.38540HepG2PKM
GLYCTKENSG00000168237.13823.75980410.069801.0063018.6616016.87110HepG2PPIL4
GLYCTKENSG00000168237.13353.88730561.95320-0.667202.334801.58980HepG2PRPF8
GLYCTKENSG00000168237.131216.775501507.51260-0.309103.757603.14160HepG2PTBP1
GLYCTKENSG00000168237.132106.21970843.570001.3200035.8325033.99030HepG2PUF60
GLYCTKENSG00000168237.131870.95740975.447300.9395032.3566030.68110HepG2PUS1
GLYCTKENSG00000168237.131233.867501632.73940-0.404104.951804.15210HepG2QKI
GLYCTKENSG00000168237.13165.33080589.83770-1.835004.286903.41910HepG2RAVER1
GLYCTKENSG00000168237.13409.88710769.46170-0.9086013.5124011.83280HepG2RBM15
GLYCTKENSG00000168237.13431.618701448.03880-1.7463061.9244060.11310HepG2RBM22
GLYCTKENSG00000168237.13817.710601481.79100-0.8577015.1844013.67280HepG2RBM25
GLYCTKENSG00000168237.131111.61970696.424200.674503.661202.51300HepG2RBM27
GLYCTKENSG00000168237.131261.84230565.531701.1578015.0736012.73270HepG2RCC2
GLYCTKENSG00000168237.131495.22250606.790601.3010010.773209.57620HepG2RPLP0
GLYCTKENSG00000168237.131269.64620580.080001.130008.045306.50820HepG2RPS10
GLYCTKENSG00000168237.131223.16960642.205900.929406.044704.88730HepG2RPS2
GLYCTKENSG00000168237.131183.40360318.429901.8938030.8520028.29890HepG2RPS3A
GLYCTKENSG00000168237.13307.67140555.83950-0.853303.151102.31980HepG2RRP9
GLYCTKENSG00000168237.13674.41250409.434700.719904.500703.71240HepG2SAFB2
GLYCTKENSG00000168237.13527.73630302.444900.803004.709802.73040HepG2SBDS
GLYCTKENSG00000168237.13791.799601153.01020-0.542203.539302.77270HepG2SF3A3
GLYCTKENSG00000168237.13515.11410303.520300.763002.539301.86160HepG2SF3B1
GLYCTKENSG00000168237.131013.710601569.57080-0.6307012.9390011.80870HepG2SF3B4
GLYCTKENSG00000168237.131481.83970808.924000.8732027.0970025.34320HepG2SLBP
GLYCTKENSG00000168237.13207.195601635.48820-2.98070175.91000173.55270HepG2SRFBP1
GLYCTKENSG00000168237.13850.609101638.26940-0.9456027.5937026.44160HepG2SRSF1
GLYCTKENSG00000168237.13179.11170326.63840-0.866804.605803.28300HepG2SRSF3
GLYCTKENSG00000168237.131283.33660553.312501.2136035.1169033.20160HepG2SRSF7
GLYCTKENSG00000168237.13494.946101332.79990-1.4291051.9514050.14870HepG2SRSF9
GLYCTKENSG00000168237.134019.954301419.958801.50120101.6800099.76360HepG2SSB
GLYCTKENSG00000168237.13522.494301472.47750-1.4948049.3601047.37990HepG2TAF15
GLYCTKENSG00000168237.13538.58960298.983400.849007.703006.57040HepG2TARDBP
GLYCTKENSG00000168237.131815.66630672.185201.433503.663802.44320HepG2TBRG4
GLYCTKENSG00000168237.13737.752701353.07300-0.8750016.3936014.41460HepG2TIA1
GLYCTKENSG00000168237.13823.88950446.722300.8830013.2808012.32420HepG2TIAL1
GLYCTKENSG00000168237.131397.96030824.189300.762209.793807.96160HepG2TUFM
GLYCTKENSG00000168237.13496.65220769.49920-0.631705.647104.76650HepG2U2AF1
GLYCTKENSG00000168237.131257.949501022.547400.298803.405702.64460HepG2UPF1
GLYCTKENSG00000168237.131528.90700664.115501.202909.209707.33120HepG2UPF2
GLYCTKENSG00000168237.13581.18120285.223401.026808.537906.62610HepG2XPO5
GLYCTKENSG00000168237.131875.38970714.348601.3924022.1159020.14890HepG2XRN2
GLYCTKENSG00000168237.13933.760801124.60130-0.268302.678702.13890HepG2ZNF622
GLYCTKENSG00000168237.1337.8897066.66390-0.815101.871001.31570K562DDX47
GLYCTKENSG00000168237.1319.1174054.74360-1.517802.793701.78440K562EIF3A
GLYCTKENSG00000168237.136.1044023.39600-1.938302.324901.68450K562G3BP2
GLYCTKENSG00000168237.1316.3613067.60250-2.046806.248104.99480K562PCBP3
GLYCTKENSG00000168237.1315.5479051.85840-1.737904.270403.27160K562POLR2G
GLYCTKENSG00000168237.1329.0192062.82930-1.114402.384901.68720K562PRPF8
GLYCTKENSG00000168237.1380.1565044.787300.839602.296701.53570K562RBM22
GLYCTKENSG00000168237.1314.2453045.84290-1.686202.772002.06490K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GLYCTK is not available on ENCORE database.





12 RBPs can affect the splicing of GLYCTK :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGLYCTKENSG00000168237.13chr3+523243195232473552321835523218925232497552325127-0.244000.001310.07373excludedHepG2RBM22
SEGLYCTKENSG00000168237.13chr3+523243195232473552321835523218925232497552325127-0.499000.000000.00052excludedHepG2AKAP1
SEGLYCTKENSG00000168237.13chr3+523257625232593852324975523251275232627552326585-0.240000.000090.00353excludedHepG2SRSF1
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.233000.000210.01456includedHepG2BCCIP
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.248000.001820.02182includedHepG2SF3A3
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.387000.000380.01244includedHepG2UCHL5
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.421000.000040.00094includedHepG2PRPF8
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325760523259380.205000.007770.07075includedHepG2QKI
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.198000.000140.00436includedHepG2G3BP1
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.323000.000000.00018includedHepG2FUBP3
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.407000.000000.00000includedHepG2HNRNPK
RIGLYCTKENSG00000168237.13chr3+5232497552325938523249755232512752325762523259380.261000.000020.00217includedHepG2XRN2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GLYCTK is not avaliable on ENCORE database.