GIPC1

General Information

Gene Name       : GIPC1
Gene ID             : ENSG00000123159.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GIPC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GIPC1ENSG00000123159.150.663.412.04ENCSR000AEF
HepG2GIPC1ENSG00000123159.1548.569.2128.89ENCSR985KAT
K562GIPC1ENSG00000123159.1525.349.1517.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GIPC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GIPC1 RNA is bound by 6 proteins.  







eCLIP assay for GIPC1 is not avaliable on ENCORE database.





6 proteins are bound to GIPC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191458880514588942-3'-UTR,intron-Distal,intron-Proximal5.422399.20661K562UPF1
chr191458894214589026-3'-UTR,intron-Distal,intron-Proximal4.002625.99105K562UPF1
chr191458908014589207-3'-UTR,intron-Distal5.180599.76086HepG2UPF1
chr191458895414589080-3'-UTR,intron-Distal,intron-Proximal5.6892314.10191HepG2UPF1
chr191458915814589257-3'-UTR,CDS,intron-Distal4.105493.08510HepG2ZC3H11A
chr191458898114589084-3'-UTR,intron-Distal,intron-Proximal4.386335.04923HepG2AKAP1
chr191458886314588924-3'-UTR,intron-Distal4.023013.45012HepG2UPF1
chr191458865814588789-3'-UTR,intron-Distal,intron-Proximal4.282348.17454K562UPF1
chr191458865114588745-3'-UTR,intron-Distal,intron-Proximal4.646755.67997HepG2UPF1
chr191460366314603724-5'-UTR,intron-Distal,intron-Proximal4.476296.92541HepG2PPIG
chr191459122814591358-CDS,intron-Distal,intron-Proximal5.713199.88352HepG2BUD13
chr191459695114597042-intron-Distal4.249164.33299K562ILF3
chr191459640214596473-intron-Distal3.275274.07710K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GIPC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GIPC1 is not available on ENCORE database.

  • 127 RBPs can affect the levels of GIPC1.  








The Knockdown/knockout RNA-Seq assay for GIPC1 is not available on ENCORE database.





127 RBPs can affect the gene expression of GIPC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GIPC1ENSG00000123159.111067.77380733.257900.542104.474103.29710HepG2ABCF1
GIPC1ENSG00000123159.111241.45750583.506601.0891032.4176030.88550HepG2ACO1
GIPC1ENSG00000123159.111253.82080445.044201.4942012.1361011.10060HepG2AKAP1
GIPC1ENSG00000123159.111106.64910586.291300.9164020.4201018.61550HepG2AKAP8L
GIPC1ENSG00000123159.111248.71410919.607100.441303.113202.39210HepG2AUH
GIPC1ENSG00000123159.11564.78180753.26150-0.415502.903702.29190HepG2BOP1
GIPC1ENSG00000123159.11528.06220349.830900.594003.961703.04640HepG2CIRBP
GIPC1ENSG00000123159.11906.90210583.431700.6363010.892409.75070HepG2CKAP4
GIPC1ENSG00000123159.11460.08210222.830201.045806.719905.52970HepG2CNOT7
GIPC1ENSG00000123159.11323.54150691.52940-1.0958013.2666011.88770HepG2CPSF6
GIPC1ENSG00000123159.11168.30870263.80790-0.648402.780701.42340HepG2CSTF2T
GIPC1ENSG00000123159.11767.23870428.517200.8402013.4645012.25660HepG2CELF1
GIPC1ENSG00000123159.11726.72490539.683900.429205.048003.96710HepG2DDX19B
GIPC1ENSG00000123159.11453.24650284.227100.673205.012004.12720HepG2DDX21
GIPC1ENSG00000123159.11198.72660278.16290-0.485102.313601.48570HepG2DDX24
GIPC1ENSG00000123159.111055.89690426.252501.3086019.5733018.07010HepG2DDX3X
GIPC1ENSG00000123159.11868.00620389.523001.155903.750302.86580HepG2DDX55
GIPC1ENSG00000123159.11167.79050280.26860-0.740104.508903.27110HepG2DHX30
GIPC1ENSG00000123159.11443.27540558.27110-0.332802.288601.66240HepG2DKC1
GIPC1ENSG00000123159.11523.75200288.003400.8627012.5849011.30210HepG2DNAJC2
GIPC1ENSG00000123159.11579.64830336.639900.783906.051104.73540HepG2EEF2
GIPC1ENSG00000123159.11803.25880556.223300.530105.025503.47510HepG2EIF2S2
GIPC1ENSG00000123159.11497.56280273.231200.864703.737802.69620HepG2EIF3D
GIPC1ENSG00000123159.11731.41360388.919200.911104.006303.24070HepG2EIF4A3
GIPC1ENSG00000123159.11599.58890378.810200.662402.115801.51090HepG2EIF4B
GIPC1ENSG00000123159.11271.51730454.56620-0.743404.422303.40590HepG2EIF4G1
GIPC1ENSG00000123159.11896.87970570.236300.653307.521106.14880HepG2EWSR1
GIPC1ENSG00000123159.11979.17410740.410000.403102.464201.73460HepG2FIP1L1
GIPC1ENSG00000123159.11254.02040432.13790-0.766506.309205.15070HepG2FUBP3
GIPC1ENSG00000123159.11945.51670392.629601.2678018.4066016.80110HepG2FXR1
GIPC1ENSG00000123159.11640.12060364.102400.813903.197202.48450HepG2G3BP1
GIPC1ENSG00000123159.11467.91750243.263600.943603.779002.71630HepG2GEMIN5
GIPC1ENSG00000123159.11423.85900261.885000.694604.144002.89520HepG2GNB2L1
GIPC1ENSG00000123159.11264.41510783.88690-1.5678022.4489020.81630HepG2GPKOW
GIPC1ENSG00000123159.11343.87350188.583400.866604.523802.73690HepG2HNRNPA0
GIPC1ENSG00000123159.11476.58730293.373200.699905.508704.64020HepG2HNRNPA1
GIPC1ENSG00000123159.11313.24650184.137800.766404.295602.54420HepG2HNRNPAB
GIPC1ENSG00000123159.11540.29460368.964800.550203.296102.53530HepG2HNRNPK
GIPC1ENSG00000123159.11536.62760419.689600.354502.883002.19720HepG2HNRNPL
GIPC1ENSG00000123159.11482.86860748.07910-0.631605.168104.33570HepG2HNRNPLL
GIPC1ENSG00000123159.11657.22230510.838800.363402.387301.50290HepG2HNRNPM
GIPC1ENSG00000123159.11495.31080324.159900.611503.609502.92570HepG2HNRNPU
GIPC1ENSG00000123159.11688.64990453.273700.603302.573101.39210HepG2HSPD1
GIPC1ENSG00000123159.11743.31430370.059801.006109.869608.68030HepG2IGF2BP2
GIPC1ENSG00000123159.11435.42300331.119700.395003.099202.32730HepG2ILF2
GIPC1ENSG00000123159.11319.67540212.484500.589102.818001.61350HepG2KHDRBS1
GIPC1ENSG00000123159.111977.69970804.945601.2968019.3875017.16460HepG2LARP4
GIPC1ENSG00000123159.11475.91790256.632700.890907.718905.90390HepG2LARP7
GIPC1ENSG00000123159.11337.26870217.234700.634503.540101.72210HepG2MARK2
GIPC1ENSG00000123159.111023.67260394.929101.3740019.2461017.70130HepG2MATR3
GIPC1ENSG00000123159.11430.68350285.929000.590902.373601.39590HepG2METAP2
GIPC1ENSG00000123159.11788.03170599.219900.395102.914602.08570HepG2MSI2
GIPC1ENSG00000123159.11325.42840503.17190-0.628705.025003.39610HepG2NAA15
GIPC1ENSG00000123159.111133.99190404.202001.488205.088604.24130HepG2NCBP2
GIPC1ENSG00000123159.11691.57770429.617800.686704.276202.49940HepG2NKRF
GIPC1ENSG00000123159.11662.35230456.867800.535703.571202.70490HepG2NOL12
GIPC1ENSG00000123159.11296.19580180.120500.717503.146801.60070HepG2NOLC1
GIPC1ENSG00000123159.11980.61790357.977201.453704.320802.93580HepG2NONO
GIPC1ENSG00000123159.11336.88390663.32650-0.9775010.314208.94530HepG2NSUN2
GIPC1ENSG00000123159.11444.58760260.761200.769604.440201.89910HepG2NUSAP1
GIPC1ENSG00000123159.11779.20760383.107201.0242019.3770018.00460HepG2PCBP1
GIPC1ENSG00000123159.11408.41960289.125800.498303.609502.77880HepG2PPIL4
GIPC1ENSG00000123159.11391.54690491.44980-0.327902.117001.43260HepG2PRPF4
GIPC1ENSG00000123159.11927.30270389.813301.2502029.2445027.83750HepG2PTBP1
GIPC1ENSG00000123159.11689.37550436.126800.660406.498305.63640HepG2PUF60
GIPC1ENSG00000123159.111124.71310462.975401.2804043.9625042.17450HepG2PUM1
GIPC1ENSG00000123159.11671.96090462.632500.538402.359001.73860HepG2PUM2
GIPC1ENSG00000123159.11899.83450594.346900.598309.301308.28300HepG2PUS1
GIPC1ENSG00000123159.11589.60370240.932301.291003.558502.76180HepG2RAVER1
GIPC1ENSG00000123159.11601.58960309.468400.958908.705006.93880HepG2RBM27
GIPC1ENSG00000123159.11529.32150251.303101.074609.292607.37940HepG2RCC2
GIPC1ENSG00000123159.111056.95450433.835301.2846031.4734030.06960HepG2NELFE
GIPC1ENSG00000123159.11888.08030265.911301.7396031.1913029.50820HepG2RPS19
GIPC1ENSG00000123159.11668.49090285.392801.2279012.9996011.36540HepG2RPS2
GIPC1ENSG00000123159.11395.32660223.907700.820004.952503.88160HepG2RPS3A
GIPC1ENSG00000123159.11487.44710291.344700.742405.176503.69280HepG2RPS5
GIPC1ENSG00000123159.11364.25360288.682600.335401.887301.33820HepG2SAFB2
GIPC1ENSG00000123159.111225.71550563.741101.120404.576003.69840HepG2SF3A3
GIPC1ENSG00000123159.11403.14810740.44160-0.877109.757708.50470HepG2SF3B1
GIPC1ENSG00000123159.11602.01650405.868600.568705.496104.71120HepG2SF3B4
GIPC1ENSG00000123159.11699.65040334.366001.065103.029401.49880HepG2SFPQ
GIPC1ENSG00000123159.11783.42820336.659301.2184029.2042027.48070HepG2SMN1
GIPC1ENSG00000123159.11567.36760246.853401.200504.656603.38340HepG2SMNDC1
GIPC1ENSG00000123159.11204.14740823.87430-2.0128025.7536023.45650HepG2SNRNP70
GIPC1ENSG00000123159.11661.19170423.629700.642207.328006.64380HepG2SRSF1
GIPC1ENSG00000123159.111173.57250430.620801.4463046.8564044.74020HepG2SRSF5
GIPC1ENSG00000123159.11344.01320194.827300.820204.250602.85430HepG2STIP1
GIPC1ENSG00000123159.11990.46710489.726701.0160024.5334022.97940HepG2SUCLG1
GIPC1ENSG00000123159.11131.58460380.74930-1.5329019.9982018.68930HepG2TAF15
GIPC1ENSG00000123159.11454.89530259.788300.808102.610101.63900HepG2TFIP11
GIPC1ENSG00000123159.11688.73910317.796001.1158021.4854020.09920HepG2TRIM56
GIPC1ENSG00000123159.11567.06940426.089800.412302.759001.88750HepG2TUFM
GIPC1ENSG00000123159.11938.10170358.134401.389105.191103.81120HepG2U2AF2
GIPC1ENSG00000123159.11943.58860451.017501.064904.209703.16480HepG2UBE2L3
GIPC1ENSG00000123159.11414.63630228.948300.856702.816602.04960HepG2UCHL5
GIPC1ENSG00000123159.11871.91370499.953000.8023014.8514013.48130HepG2UPF1
GIPC1ENSG00000123159.11844.72170482.683700.8073013.6048012.42590HepG2UTP3
GIPC1ENSG00000123159.11555.02160265.178201.065503.714602.48490HepG2XRCC6
GIPC1ENSG00000123159.11836.22110549.851400.604709.785208.91440HepG2ZNF622
GIPC1ENSG00000123159.11967.68690588.598800.7172012.1566011.06000K562AGGF1
GIPC1ENSG00000123159.11836.10400646.803800.370302.816101.82260K562AKAP8
GIPC1ENSG00000123159.11923.41700612.469300.592206.163005.16140K562AKAP8L
GIPC1ENSG00000123159.11403.16930292.975400.460502.852401.51370K562BCCIP
GIPC1ENSG00000123159.11479.83230283.127400.761006.000204.56520K562BCLAF1
GIPC1ENSG00000123159.11888.02450703.389700.336202.808901.62240K562CCDC124
GIPC1ENSG00000123159.11434.18180214.794401.015203.811002.54450K562CSTF2
GIPC1ENSG00000123159.11860.51890643.447100.419302.844001.61590K562DDX21
GIPC1ENSG00000123159.11388.53330248.239100.646205.604003.72190K562DDX27
GIPC1ENSG00000123159.111110.28780713.635200.6376010.706009.52000K562DDX47
GIPC1ENSG00000123159.11508.57130286.720000.826703.187402.20210K562EFTUD2
GIPC1ENSG00000123159.11825.27740569.913300.534006.135805.12820K562EIF2S2
GIPC1ENSG00000123159.11277.71290164.635800.754203.398902.52300K562EIF3G
GIPC1ENSG00000123159.11597.93580455.222100.393302.807401.53420K562EXOSC5
GIPC1ENSG00000123159.11532.61100412.482100.368702.132201.38420K562FIP1L1
GIPC1ENSG00000123159.11195.51500338.88570-0.793505.080103.47500K562FKBP4
GIPC1ENSG00000123159.1127.63900111.81680-2.016406.883605.65600K562G3BP2
GIPC1ENSG00000123159.11467.45220339.290900.462202.421301.55350K562HNRNPM
GIPC1ENSG00000123159.111122.89730791.117100.505202.678701.80020K562HNRNPU
GIPC1ENSG00000123159.11767.71100559.212300.457103.391902.51190K562HSPD1
GIPC1ENSG00000123159.11430.28040206.118601.061705.282703.67920K562IGF2BP2
GIPC1ENSG00000123159.11334.29260209.537000.673802.956701.71560K562IGF2BP3
GIPC1ENSG00000123159.11362.97520215.860200.749703.987002.86440K562MATR3
GIPC1ENSG00000123159.111020.74600728.126000.487304.177503.02410K562MBNL1
GIPC1ENSG00000123159.11575.45270728.22750-0.339702.815601.99900K562MTPAP
GIPC1ENSG00000123159.11448.59650282.883200.665103.471801.99040K562NONO
GIPC1ENSG00000123159.11299.33580192.439300.637302.388501.48300K562PCBP2
GIPC1ENSG00000123159.11747.59040468.275500.674806.620005.25530K562PPIG
GIPC1ENSG00000123159.11482.40070210.210601.1983011.3983010.11120K562PTBP1
GIPC1ENSG00000123159.11841.937701070.67540-0.346703.253202.09260K562PUM1
GIPC1ENSG00000123159.11778.62310607.361600.358302.214001.71730K562PUS1
GIPC1ENSG00000123159.11812.98230591.815500.458004.576803.83340K562RBM15
GIPC1ENSG00000123159.11321.86520201.413500.676203.002602.12370K562RBM22
GIPC1ENSG00000123159.11342.19980196.457100.800503.816802.09310K562RBM34
GIPC1ENSG00000123159.11328.40900211.991300.631402.506101.47190K562NELFE
GIPC1ENSG00000123159.11573.48880284.098701.013308.455807.01280K562RPS19
GIPC1ENSG00000123159.11664.85420411.303400.692702.644901.48070K562SF1
GIPC1ENSG00000123159.11176.50360116.112600.604102.581501.75830K562SF3B4
GIPC1ENSG00000123159.11444.14400302.482900.554103.415902.24690K562SRFBP1
GIPC1ENSG00000123159.11652.37910818.02620-0.326402.365001.49050K562SRPK2
GIPC1ENSG00000123159.11418.30750206.108001.021104.075403.22430K562SRSF1
GIPC1ENSG00000123159.11344.32960194.731500.822202.312201.36750K562SRSF5
GIPC1ENSG00000123159.1144.10710109.74820-1.315103.348001.68060K562TAF15
GIPC1ENSG00000123159.11502.04620208.526801.267509.285807.88110K562TARDBP
GIPC1ENSG00000123159.11430.43140201.165501.097304.959003.81280K562TIA1
GIPC1ENSG00000123159.11391.17740197.563900.985406.129704.35030K562TRA2A
GIPC1ENSG00000123159.11493.11250357.361000.464402.205301.37500K562TRIM56
GIPC1ENSG00000123159.11927.562101134.87600-0.291002.706201.32140K562UBE2L3
GIPC1ENSG00000123159.11417.95680285.808000.548202.661601.66530K562UCHL5
GIPC1ENSG00000123159.11461.44150291.187500.664103.633502.18050K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GIPC1 is not available on ENCORE database.





13 RBPs can affect the splicing of GIPC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.459000.000000.00000excludedK562SRSF1
SEGIPC1ENSG00000123159.11chr19-145911161459129714590223145903361459140414591590-0.093000.001080.02191excludedHepG2U2AF1
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.399000.000000.00015excludedK562FMR1
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.217000.000000.00001excludedK562AQR
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.144000.000560.09140excludedK562HNRNPA1
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.225000.000150.03690excludedHepG2UCHL5
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.277000.000000.00000excludedK562PUS1
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.316000.000000.00000excludedK562HNRNPL
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.142000.001060.02862excludedK562RBM15
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.364000.000010.00146excludedK562CPSF6
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.325000.000400.01996excludedK562SF3B1
SEGIPC1ENSG00000123159.11chr19-145935001459381814591404145915901460246714602555-0.268000.000010.00023excludedK562HNRNPC
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.313000.000000.000001includedK562HNRNPL
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.109000.002940.069421includedK562RBM15
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.232000.000000.000011includedK562PUS1
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.401000.000000.000151includedK562SRSF1
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.249000.000730.039711includedK562SF3B1
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.182000.000000.000071includedK562AQR
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.212000.000000.000201includedK562HNRNPC
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.292000.000010.003791includedK562CPSF6
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.098000.005260.087551includedK562PPIL4
MXEGIPC1ENSG00000123159.11chr19-14593500145938181460246714602555145914041459159014606848146069440.296000.000010.001571includedK562FMR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GIPC1 is not avaliable on ENCORE database.