FAM169A

General Information

Gene Name       : FAM169A
Gene ID             : ENSG00000198780.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM169A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM169AENSG00000198780.112.922.302.61ENCSR000AEF
HepG2FAM169AENSG00000198780.1111.7826.4319.11ENCSR985KAT
K562FAM169AENSG00000198780.110.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM169A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM169A RNA is bound by 31 proteins.  







eCLIP assay for FAM169A is not avaliable on ENCORE database.





31 proteins are bound to FAM169A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr57407875274078850-3'-UTR,CDS,intron-Distal,intron-Proximal3.067048.14510HepG2GRWD1
chr57410095074101005-3'-UTR,CDS,intron-Distal,intron-Proximal5.116245.01842HepG2PRPF8
chr57407727574077382-3'-UTR,CDS,intron-Distal4.714945.58786HepG2TRA2A
chr57407761074077701-3'-UTR,CDS,intron-Distal3.8108010.37681HepG2BCLAF1
chr57407776774077819-3'-UTR,CDS,intron-Distal3.627917.89598HepG2GRWD1
chr57409741474097448-3'-UTR,CDS,intron-Distal,intron-Proximal3.102513.40321HepG2GRWD1
chr57407875974078849-3'-UTR,CDS,intron-Distal4.4870017.76796HepG2BCLAF1
chr57410100674101103-3'-UTR,CDS,intron-Distal3.623733.40928HepG2UCHL5
chr57407894574078991-3'-UTR,CDS,intron-Distal,intron-Proximal4.167234.86518HepG2BUD13
chr57407725074077362-3'-UTR,CDS,intron-Distal3.9852412.54952HepG2BCLAF1
chr57410966474109736-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.958954.65682HepG2UCHL5
chr57410966674109731-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.011334.31628HepG2EIF3D
chr57409670374096791-3'-UTR,CDS,intron-Distal,intron-Proximal4.122537.35476HepG2GRWD1
chr57407505574075103-3'-UTR,intron-Distal3.691334.59124HepG2FUBP3
chr57409185474091932-3'-UTR,CDS,intron-Distal,intron-Proximal3.3804910.67070HepG2BCLAF1
chr57410099574101101-3'-UTR,CDS,intron-Distal4.2131415.57891HepG2BCLAF1
chr57407773174077767-3'-UTR,CDS,intron-Distal4.644956.26332HepG2GRWD1
chr57407884974078898-3'-UTR,CDS,intron-Distal3.342126.19339HepG2BCLAF1
chr57407768274077731-3'-UTR,CDS,intron-Distal4.158814.01763HepG2GRWD1
chr57410965974109742-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9056119.82091HepG2BCLAF1
chr57409682974096916-3'-UTR,CDS,intron-Distal,intron-Proximal5.078207.56728HepG2AQR
chr57407615274076306-3'-UTR,intron-Distal3.243343.99175HepG2IGF2BP1
chr57410032574100404-3'-UTR,CDS,intron-Distal3.6896910.92329HepG2BCLAF1
chr57409185874091959-3'-UTR,CDS,intron-Distal3.3166911.95436HepG2GRWD1
chr57407774674077822-3'-UTR,CDS,intron-Distal4.2789514.68146HepG2BCLAF1
chr57410027874100340-3'-UTR,CDS,intron-Distal,intron-Proximal6.165669.06713HepG2PRPF8
chr57407759374077664-3'-UTR,CDS,intron-Distal4.283696.29084HepG2RBM15
chr57416192674161992-5'-UTR,intron-Distal4.814013.59236HepG2AQR
chr57416254374162645-5'-UTR,intron-Distal3.547075.18770HepG2NCBP2
chr57416128474161377-5'-UTR,intron-Distal3.073237.95558HepG2SFPQ
chr57416214074162213-5'-UTR,intron-Distal,intron-Proximal4.103363.73296HepG2IGF2BP1
chr57416214474162200-5'-UTR,intron-Distal,intron-Proximal4.168968.57568HepG2XRN2
chr57416219974162259-5'-UTR,intron-Distal,intron-Proximal3.8258510.66407HepG2SFPQ
chr57416264574162747-5'-UTR,intron-Distal,intron-Proximal3.203855.04173HepG2NCBP2
chr57416129774161401-5'-UTR,intron-Distal3.027513.49818HepG2FUS
chr57416220074162284-5'-UTR,intron-Distal,intron-Proximal4.2371211.34811HepG2XRN2
chr57416220774162323-5'-UTR,intron-Distal,intron-Proximal4.0771924.16627HepG2CSTF2T
chr57413733774137424-CDS,intron-Distal,intron-Proximal4.348785.13777HepG2PRPF8
chr57413589874135910-CDS,intron-Distal,intron-Proximal3.359804.25541HepG2GRWD1
chr57413591074135936-CDS,intron-Distal3.410216.45347HepG2GRWD1
chr57413595774136014-CDS,intron-Distal,intron-Proximal3.201345.94782HepG2U2AF2
chr57413599074136042-CDS,intron-Distal,intron-Proximal3.610296.50179HepG2BUD13
chr57413589674135995-CDS,intron-Distal,intron-Proximal3.3902920.65922HepG2BCLAF1
chr57416236674162432-intron-Distal3.294033.59803HepG2PTBP1
chr57416236474162426-intron-Distal3.525229.03728HepG2FASTKD2
chr57416236574162420-intron-Distal3.332335.91268HepG2KHSRP
chr57415835074158380-intron-Distal5.462959.68377HepG2HNRNPM
chr57413771074137781-intron-Distal4.290014.26925HepG2KHSRP
chr57412163874121781-intron-Distal3.214333.35377HepG2QKI
chr57413046674130548-intron-Distal,intron-Proximal5.023177.22833HepG2KHSRP
chr57415033174150448-intron-Distal4.692645.54349HepG2GTF2F1
chr57413862374138726-intron-Distal3.073533.19528HepG2KHSRP
chr57416221574162286-intron-Distal,intron-Proximal3.164183.69265HepG2FKBP4
chr57416221674162274-intron-Distal,intron-Proximal3.829385.29681HepG2NCBP2
chr57414707574147140-intron-Distal3.365785.59399HepG2SUGP2
chr57415828574158350-intron-Distal6.0740212.23409HepG2HNRNPM
chr57414794674147999-intron-Distal3.941184.38996HepG2HNRNPM
chr57414724474147307-intron-Distal3.644418.14948HepG2SUGP2
chr57413016574130229-intron-Distal,intron-Proximal3.094113.65707HepG2KHSRP
chr57411585674115869-intron-Distal6.5154716.92618HepG2XPO5
chr57415811474158169-intron-Distal3.8117811.65485HepG2HNRNPM
chr57416236374162427-intron-Distal3.173804.94627HepG2DGCR8
chr57409122974091276-intron-Distal3.851337.32475HepG2PTBP1
chr57413760974137677-intron-Distal3.930579.18134HepG2U2AF2
chr57414322374143295-intron-Distal4.693677.42379HepG2CSTF2
chr57411586974115903-intron-Distal5.6992819.46132HepG2XPO5
chr57416152274161580-intron-Distal,intron-Proximal3.152185.10926HepG2GTF2F1
chr57414783574147901-intron-Distal3.407458.84291HepG2SUGP2
chr57416221474162268-intron-Distal,intron-Proximal4.227847.76457HepG2GTF2F1
chr57411413974114236-intron-Distal3.624885.10768HepG2QKI
chr57411483474114886-intron-Distal3.807483.15106HepG2HNRNPC
chr57416237174162420-intron-Distal3.554963.19512HepG2FKBP4
chr57415777574157830-intron-Distal3.813895.28337HepG2HNRNPM
chr57416235474162459-intron-Distal4.020927.11537HepG2PRPF4
chr57409793174098002-intron-Distal3.471624.04583HepG2XPO5
chr57414066374140711-intron-Distal3.110074.40834HepG2QKI
chr57416227274162327-intron-Distal,intron-Proximal3.502023.90917HepG2PRPF4
chr57415824474158274-intron-Distal3.689934.94813HepG2HNRNPM
chr57414715774147208-intron-Distal3.671784.60009HepG2SUGP2
chr57414166674141725-intron-Distal4.685056.88667HepG2SUGP2
chr57410950274109629-intron-Distal,intron-Proximal3.959063.50219HepG2CSTF2
chr57410686274106933-intron-Distal4.427315.99212HepG2ILF3
chr57414229474142334-intron-Distal3.022843.10640HepG2SUGP2
chr57409728974097371-intron-Distal,intron-Proximal4.648514.61663HepG2PRPF8
chr57416236274162463-intron-Distal3.6442117.43006HepG2CSTF2T
chr57410656974106580-intron-Distal3.690353.18711HepG2ILF3
chr57413060274130651-intron-Distal3.331504.03817HepG2KHSRP
chr57414413874144234-intron-Distal3.167615.72719HepG2CSTF2
chr57415807174158109-intron-Distal3.335714.40150HepG2HNRNPM
chr57413895774139104-intron-Distal3.317594.39362HepG2KHSRP
chr57410653474106569-intron-Distal4.168154.76405HepG2ILF3
chr57409118174091229-intron-Distal6.3459817.18131HepG2PTBP1
chr57410414074104194-intron-Distal3.685053.04224HepG2SUGP2
chr57409637774096439-intron-Distal3.911973.20552HepG2KHSRP
chr57416233374162413-intron-Distal3.259997.93764HepG2XPO5
chr57413819174138248-intron-Distal3.3798813.06603HepG2ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM169A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM169A is not available on ENCORE database.

  • 91 RBPs can affect the levels of FAM169A.  








The Knockdown/knockout RNA-Seq assay for FAM169A is not available on ENCORE database.





91 RBPs can affect the gene expression of FAM169A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM169AENSG00000198780.71704.750802732.83880-0.680804.403603.23480HepG2ABCF1
FAM169AENSG00000198780.71919.857002284.44500-0.250803.517402.84650HepG2ACO1
FAM169AENSG00000198780.7723.954201768.12120-1.2882026.5013024.03500HepG2ADAR
FAM169AENSG00000198780.71786.863503841.02500-1.1041017.8842016.65620HepG2AKAP1
FAM169AENSG00000198780.71950.181502799.83780-0.521704.658203.32090HepG2AKAP8
FAM169AENSG00000198780.71486.780102295.39250-0.6265013.0006011.50100HepG2AKAP8L
FAM169AENSG00000198780.72386.534003178.19640-0.413303.628402.73190HepG2ASCC1
FAM169AENSG00000198780.73161.333002467.620800.357302.780101.36960HepG2ATP5C1
FAM169AENSG00000198780.73554.417404077.34920-0.198002.579001.91300HepG2AUH
FAM169AENSG00000198780.7921.724401797.62890-0.963706.429604.97480HepG2BCCIP
FAM169AENSG00000198780.72086.326901562.220100.417303.927602.87480HepG2BCLAF1
FAM169AENSG00000198780.73078.700502237.252200.460506.894905.74940HepG2CALR
FAM169AENSG00000198780.72170.629003019.48260-0.476204.789403.78510HepG2CIRBP
FAM169AENSG00000198780.72671.880502284.206500.226103.195502.49040HepG2CKAP4
FAM169AENSG00000198780.72146.376802694.66570-0.328202.620901.94950HepG2CPSF6
FAM169AENSG00000198780.71458.985901110.699200.393403.931602.67500HepG2CSTF2
FAM169AENSG00000198780.72193.365501391.344200.656604.192402.39210HepG2CSTF2T
FAM169AENSG00000198780.72061.316102495.49630-0.275803.549702.84020HepG2CELF1
FAM169AENSG00000198780.72299.512602683.47140-0.222803.480202.66620HepG2DAZAP1
FAM169AENSG00000198780.71680.319902112.90300-0.330505.741904.59920HepG2DDX19B
FAM169AENSG00000198780.7662.067101499.42590-1.1794024.4888022.75550HepG2DDX21
FAM169AENSG00000198780.71797.126601467.213100.292502.546901.67370HepG2DDX24
FAM169AENSG00000198780.71092.331201767.32740-0.694203.974203.06460HepG2DDX55
FAM169AENSG00000198780.73290.422202487.136400.403703.923202.72700HepG2DDX5
FAM169AENSG00000198780.71903.614103160.46330-0.731408.341107.32360HepG2DDX6
FAM169AENSG00000198780.71487.418702185.66160-0.555308.503307.44570HepG2DKC1
FAM169AENSG00000198780.71397.154601780.41700-0.349704.419503.54600HepG2DNAJC21
FAM169AENSG00000198780.72454.739301764.684800.4761011.3748010.15150HepG2DNAJC2
FAM169AENSG00000198780.71822.689403038.58500-0.737309.876408.79770HepG2EIF2S1
FAM169AENSG00000198780.71747.606403358.16530-0.9423013.3909012.00710HepG2EIF4A3
FAM169AENSG00000198780.73246.898204681.26030-0.5278014.0225012.83660HepG2ETF1
FAM169AENSG00000198780.71281.006802232.54000-0.8014015.2941013.42790HepG2EWSR1
FAM169AENSG00000198780.71854.853801428.852000.376303.653402.36460HepG2FASTKD2
FAM169AENSG00000198780.71884.182901471.176500.356903.029901.70230HepG2FKBP4
FAM169AENSG00000198780.72288.298601622.683500.495806.456805.28380HepG2FUBP3
FAM169AENSG00000198780.72217.171603387.72860-0.611607.391906.30030HepG2FXR1
FAM169AENSG00000198780.71749.500303142.88820-0.8451011.7120010.39010HepG2G3BP1
FAM169AENSG00000198780.71638.533003054.72770-0.8986013.1276011.83230HepG2GPKOW
FAM169AENSG00000198780.73234.093101996.998500.695404.558302.74630HepG2HLTF
FAM169AENSG00000198780.7760.124901797.47370-1.2417028.8932027.21140HepG2HNRNPA1
FAM169AENSG00000198780.73171.957802466.090500.363006.070804.77840HepG2HNRNPA2B1
FAM169AENSG00000198780.72193.448203181.82120-0.536705.828604.84330HepG2HNRNPK
FAM169AENSG00000198780.71508.713502444.49780-0.6962025.1924023.37610HepG2HNRNPL
FAM169AENSG00000198780.72003.181002915.17260-0.541306.095105.20020HepG2HNRNPLL
FAM169AENSG00000198780.72002.565703194.77440-0.673908.673607.54950HepG2IGF2BP2
FAM169AENSG00000198780.71752.612702028.77220-0.211103.050302.28340HepG2ILF2
FAM169AENSG00000198780.74203.101403213.215400.387302.592001.62560HepG2KHSRP
FAM169AENSG00000198780.72785.040802088.429700.415209.178907.41340HepG2KIF1C
FAM169AENSG00000198780.74261.503803283.426300.376102.449201.67070HepG2LARP4
FAM169AENSG00000198780.72303.990403407.96080-0.564805.507304.64130HepG2MATR3
FAM169AENSG00000198780.72958.735302234.490800.404903.334902.45000HepG2MSI2
FAM169AENSG00000198780.72497.278901876.083600.412504.848903.24510HepG2NAA15
FAM169AENSG00000198780.72105.051302660.91400-0.338104.411103.44930HepG2NOL12
FAM169AENSG00000198780.72190.177802884.13840-0.397107.625606.69760HepG2PCBP1
FAM169AENSG00000198780.71770.602401142.733800.6317010.915708.68370HepG2PKM
FAM169AENSG00000198780.73556.620702270.694200.6473012.6582011.18240HepG2PRPF4
FAM169AENSG00000198780.73858.231002934.736700.394608.020107.18770HepG2PTBP1
FAM169AENSG00000198780.71608.836102694.34890-0.7439010.227408.98090HepG2PUM2
FAM169AENSG00000198780.74137.271802326.893200.8302028.6892027.09350HepG2PUS1
FAM169AENSG00000198780.75672.290503178.353900.8356026.3915024.74950HepG2QKI
FAM169AENSG00000198780.72691.879801905.374000.498402.533001.85790HepG2RAVER1
FAM169AENSG00000198780.71607.332503912.68450-1.2835058.5890056.81940HepG2RBM22
FAM169AENSG00000198780.73711.122502884.575000.363404.282103.45800HepG2RBM25
FAM169AENSG00000198780.71885.418703266.06520-0.7927026.7017025.37280HepG2NELFE
FAM169AENSG00000198780.72350.667503041.92300-0.371906.922606.01170HepG2RECQL
FAM169AENSG00000198780.73116.635601870.991400.736105.972504.61410HepG2RPS10
FAM169AENSG00000198780.7983.266002200.63750-1.162305.518703.98630HepG2RPS5
FAM169AENSG00000198780.74434.969802072.054001.0978012.432109.47790HepG2RTF1
FAM169AENSG00000198780.73203.232302435.349100.395309.574008.39330HepG2SLBP
FAM169AENSG00000198780.71834.605702062.65730-0.169002.117501.54360HepG2SMN1
FAM169AENSG00000198780.71216.930901940.80060-0.673404.447203.21310HepG2SMNDC1
FAM169AENSG00000198780.73517.839604419.26350-0.329106.941906.24810HepG2SRFBP1
FAM169AENSG00000198780.72855.891302507.821300.187401.987701.44590HepG2SRSF5
FAM169AENSG00000198780.72804.323602387.574900.232003.228002.48270HepG2SRSF7
FAM169AENSG00000198780.72338.361503837.01990-0.7145025.9475024.73430HepG2SSB
FAM169AENSG00000198780.72540.916201780.518100.513003.295001.97660HepG2SUB1
FAM169AENSG00000198780.72529.154202852.15060-0.173402.361801.77860HepG2SUCLG1
FAM169AENSG00000198780.74707.381802866.611200.7155020.9445019.60180HepG2TAF15
FAM169AENSG00000198780.73546.684002841.087800.319902.894902.15540HepG2TARDBP
FAM169AENSG00000198780.71414.824901929.91480-0.447905.993705.31070HepG2TIAL1
FAM169AENSG00000198780.72875.482601912.603300.588204.327002.51280HepG2TRA2A
FAM169AENSG00000198780.71311.834601947.15280-0.5698012.6233011.54590HepG2TRIM56
FAM169AENSG00000198780.73915.824302626.437200.576105.827304.58230HepG2UBE2L3
FAM169AENSG00000198780.7716.492201039.53120-0.536902.727301.97250HepG2UCHL5
FAM169AENSG00000198780.7803.956901611.66620-1.003404.212502.95880HepG2UPF2
FAM169AENSG00000198780.71935.097302486.53130-0.361703.890302.66790HepG2UTP18
FAM169AENSG00000198780.71950.576302335.61610-0.259903.201202.56530HepG2UTP3
FAM169AENSG00000198780.72565.101301873.017700.453602.745801.48730HepG2XRCC5
FAM169AENSG00000198780.7828.538801732.05710-1.063807.364006.19550HepG2XRN2
FAM169AENSG00000198780.71873.430202240.84070-0.258403.853903.08390HepG2ZC3H8
FAM169AENSG00000198780.73412.102701902.980500.842308.984506.55490HepG2ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM169A is not available on ENCORE database.





5 RBPs can affect the splicing of FAM169A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM169AENSG00000198780.7chr5-741302507413042274109666741098447413478974134875-0.139000.001870.03443excludedHepG2U2AF1
MXEFAM169AENSG00000198780.7chr5-7410966474109844741302507413042274100980741011097413478974134875-0.235000.001470.028652includedHepG2U2AF1
MXEFAM169AENSG00000198780.7chr5-74134789741348757413589874135998741096647410984474137369741375040.077000.005440.082861includedHepG2SRSF1
MXEFAM169AENSG00000198780.7chr5-7410966474109813741302507413042274100980741011097413478974134875-0.331000.003870.077572includedHepG2XRN2
MXEFAM169AENSG00000198780.7chr5-7410966474109844741302507413042274100980741011097413478974134875-0.218000.001270.072342includedHepG2G3BP1
MXEFAM169AENSG00000198780.7chr5-74130250741304227413478974134875741096647410984474135898741359980.209000.001780.046541includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM169A is not avaliable on ENCORE database.