ELF1

General Information

Gene Name : ELF1
Gene ID : ENSG00000120690.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ELF1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ELF1	ENSG00000120690.15	74.38	62.36	68.37	ENCSR000AEF
HepG2	ELF1	ENSG00000120690.15	25.82	25.74	25.78	ENCSR985KAT
K562	ELF1	ENSG00000120690.15	36.96	36.59	36.78	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ELF1 is not avaliable on ENCORE database.

Proteins bound to RNA

ELF1 RNA is bound by 24 proteins.

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eCLIP assay for ELF1 is not avaliable on ENCORE database.

24 proteins are bound to ELF1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	41634901	41634936	-	intron-Distal	4.17672	400.00000	K562	WRN
chr13	41634872	41634875	-	intron-Distal	9.60900	400.00000	K562	NSUN2
chr13	41634860	41634880	-	intron-Distal	3.59528	400.00000	K562	WRN
chr13	41634859	41634872	-	intron-Distal	9.60660	400.00000	K562	NSUN2
chr13	41634880	41634901	-	intron-Distal	3.66861	400.00000	K562	WRN
chr13	41634880	41634897	-	intron-Distal	9.58659	400.00000	K562	NSUN2
chr13	41506332	41506380	-	3'-UTR,intron-Distal	5.99244	27.03177	K562	PUM2
chr13	41634860	41634897	-	intron-Distal	3.77602	24.13104	HepG2	XPO5
chr13	41634863	41634904	-	intron-Distal	4.16569	21.80189	K562	SSB
chr13	41634904	41634914	-	intron-Distal	4.38216	17.04586	K562	SSB
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 56 entries

eCLIP assay for ELF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ELF1 is not available on ENCORE database.
108 RBPs can affect the levels of ELF1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ELF1 is not available on ENCORE database.

108 RBPs can affect the gene expression of ELF1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ELF1	ENSG00000120690.9	815.62210	1441.83860	-0.82190	24.14550	22.35770	HepG2	DAZAP1
ELF1	ENSG00000120690.9	2699.15840	1533.61300	0.81550	23.00280	21.80010	HepG2	RBM22
ELF1	ENSG00000120690.9	912.24560	1642.84430	-0.84870	23.64940	21.62230	K562	MTPAP
ELF1	ENSG00000120690.9	2727.07060	1732.18100	0.65470	20.51270	19.47770	HepG2	SRFBP1
ELF1	ENSG00000120690.9	1199.66390	1825.36740	-0.60560	17.49720	15.84200	K562	NSUN2
ELF1	ENSG00000120690.9	925.57160	1562.57880	-0.75550	15.32630	12.99820	K562	GLRX3
ELF1	ENSG00000120690.9	528.75780	1170.85890	-1.14690	12.14150	10.96540	K562	HNRNPC
ELF1	ENSG00000120690.9	1089.88900	2185.90010	-1.00400	11.06080	9.52290	K562	GRSF1
ELF1	ENSG00000120690.9	1056.13910	1655.50880	-0.64850	9.85860	8.53850	K562	SRSF1
ELF1	ENSG00000120690.9	1621.29920	1168.20880	0.47280	8.93480	7.93150	HepG2	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 128 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ELF1 is not available on ENCORE database.

7 RBPs can affect the splicing of ELF1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ELF1	ENSG00000120690.9	chr13	-	41588294	41588485	41556118	41556418	41593363	41593450	0.25500	0.00000	0.00000	included	HepG2	U2AF2
SE	ELF1	ENSG00000120690.9	chr13	-	41593363	41593568	41556118	41556418	41634973	41635576	-0.44100	0.00000	0.00027	excluded	HepG2	HNRNPA1
SE	ELF1	ENSG00000120690.9	chr13	-	41593363	41593568	41556118	41556418	41634973	41635576	-0.35500	0.00000	0.00017	excluded	K562	HNRNPC
A3SS	ELF1	ENSG00000120690.9	chr13	-	41525464	41525647	41525464	41525572	41532971	41533152	0.10300	0.00000	0.00000	longer	K562	AQR
A3SS	ELF1	ENSG00000120690.9	chr13	-	41517087	41517302	41517087	41517280	41517977	41518142	0.07100	0.00002	0.00018	longer	K562	AQR
SE	ELF1	ENSG00000120690.9	chr13	-	41593363	41593568	41556118	41556418	41634973	41635576	0.27800	0.00010	0.06549	included	HepG2	HLTF
SE	ELF1	ENSG00000120690.9	chr13	-	41593363	41593568	41556118	41556418	41634973	41635576	-0.24600	0.00025	0.03446	excluded	K562	FMR1
SE	ELF1	ENSG00000120690.9	chr13	-	41588294	41588357	41556118	41556418	41593363	41593450	0.05100	0.00124	0.04728	included	K562	PTBP1
A3SS	ELF1	ENSG00000120690.9	chr13	-	41523941	41524142	41523941	41524109	41525464	41525604	0.08300	0.00368	0.02208	longer	K562	AQR

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ELF1

General Information

Functions

Localization

Domains (AlphaFold: ELF1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ELF1 is not avaliable on ENCORE database.

24 proteins are bound to ELF1 RNA:

eCLIP assay for ELF1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ELF1 is not available on ENCORE database.

108 RBPs can affect the gene expression of ELF1 :

The Knockdown/knockout RNA-Seq assay for ELF1 is not available on ENCORE database.

7 RBPs can affect the splicing of ELF1 :

The Knockdown/knockout RNA-Seq assay for ELF1 is not avaliable on ENCORE database.