ELF1

General Information

Gene Name       : ELF1
Gene ID             : ENSG00000120690.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ELF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ELF1ENSG00000120690.1574.3862.3668.37ENCSR000AEF
HepG2ELF1ENSG00000120690.1525.8225.7425.78ENCSR985KAT
K562ELF1ENSG00000120690.1536.9636.5936.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ELF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ELF1 RNA is bound by 24 proteins.  







eCLIP assay for ELF1 is not avaliable on ENCORE database.





24 proteins are bound to ELF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr134155629941556386-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.568366.74842K562ZNF622
chr134150633241506380-3'-UTR,intron-Distal5.9924427.03177K562PUM2
chr134150627541506346-3'-UTR,intron-Distal4.612378.19301K562PABPC4
chr134155630141556400-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.463305.17903K562UCHL5
chr134155611741556238-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.182673.98353K562RBM15
chr134155638441556418-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.176663.55800HepG2BCLAF1
chr134150637641506486-3'-UTR,intron-Distal4.845464.51142K562DDX6
chr134150643241506475-3'-UTR,intron-Distal3.990695.32508K562PUM2
chr134155613041556225-3'-UTR,5'-UTR,CDS,intron-Distal4.217448.08603HepG2BCLAF1
chr134155631341556383-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.542329.74753HepG2BCLAF1
chr134159324941593399-5'-UTR,intron-Distal3.866176.43995K562PRPF8
chr134163492641634982-5'-UTR,intron-Distal3.585756.04280HepG2PRPF8
chr134152547241525574-CDS,intron-Distal,intron-Proximal3.051874.81919HepG2BCLAF1
chr134153297041533001-CDS,intron-Distal,intron-Proximal3.107183.80299HepG2GRWD1
chr134152548741525571-CDS,intron-Distal3.065134.89942HepG2GRWD1
chr134151522341515283-CDS,intron-Distal4.083555.36555HepG2BCLAF1
chr134153291341532996-CDS,intron-Distal,intron-Proximal3.503245.24055HepG2PRPF8
chr134152402741524095-CDS,intron-Distal,intron-Proximal3.376034.23325HepG2BCLAF1
chr134153293341532987-CDS,intron-Distal,intron-Proximal4.659955.68078HepG2AQR
chr134150797941508047-CDS,intron-Distal4.028753.31904K562IGF2BP1
chr134153295941533024-CDS,intron-Distal,intron-Proximal3.438945.58370HepG2PPIG
chr134150768641507848-CDS,intron-Distal4.727116.56044K562IGF2BP1
chr134153294141532973-CDS,intron-Distal,intron-Proximal4.092934.98250K562AQR
chr134155611841556151-CDS,intron-Distal,intron-Proximal4.041143.53690K562ZNF622
chr134150775841507819-CDS,intron-Distal3.171313.34231K562RBM15
chr134153296841533016-CDS,intron-Distal,intron-Proximal3.238725.40132HepG2BCLAF1
chr134158479941584913-intron-Distal3.868263.25538K562KHSRP
chr134163490141634936-intron-Distal4.17672400.00000K562WRN
chr134157341241573495-intron-Distal3.122304.30137HepG2PTBP1
chr134151733841517458-intron-Distal,intron-Proximal5.453367.27974HepG2QKI
chr134163487241634875-intron-Distal9.60900400.00000K562NSUN2
chr134151368441513744-intron-Distal3.323893.16095HepG2U2AF2
chr134154595041546051-intron-Distal3.663373.27276HepG2HNRNPL
chr134163486041634897-intron-Distal3.7760224.13104HepG2XPO5
chr134163486041634880-intron-Distal3.59528400.00000K562WRN
chr134163486341634904-intron-Distal4.1656921.80189K562SSB
chr134156414341564323-intron-Distal4.142749.73136K562KHSRP
chr134158749241587573-intron-Distal4.517425.87902HepG2KHSRP
chr134154942441549510-intron-Distal3.521604.23286HepG2QKI
chr134160424941604354-intron-Distal5.040867.45191HepG2PTBP1
chr134163485941634872-intron-Distal9.60660400.00000K562NSUN2
chr134160836341608417-intron-Distal3.974756.30359HepG2QKI
chr134162422241624310-intron-Distal3.112013.12332HepG2TAF15
chr134163305641633117-intron-Distal3.884206.47122HepG2HNRNPC
chr134161030541610359-intron-Distal4.116174.04710HepG2HNRNPC
chr134157474541574867-intron-Distal3.904913.66668K562KHSRP
chr134158843041588512-intron-Distal4.8298812.04196HepG2U2AF2
chr134156426341564376-intron-Distal4.158494.29306HepG2KHSRP
chr134163488041634901-intron-Distal3.66861400.00000K562WRN
chr134160844041608517-intron-Distal4.003075.81617HepG2QKI
chr134163488041634897-intron-Distal9.58659400.00000K562NSUN2
chr134163490441634914-intron-Distal4.3821617.04586K562SSB
chr134160661441606661-intron-Distal3.351314.74790HepG2ILF3
chr134153292941532941-intron-Distal,intron-Proximal5.030165.17615K562AQR
chr134158744341587506-intron-Distal3.425404.76825K562KHSRP
chr134158851141588600-intron-Distal4.090074.54401K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ELF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ELF1 is not available on ENCORE database.

  • 108 RBPs can affect the levels of ELF1.  








The Knockdown/knockout RNA-Seq assay for ELF1 is not available on ENCORE database.





108 RBPs can affect the gene expression of ELF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ELF1ENSG00000120690.91411.811601146.907300.299703.770303.08150HepG2ACO1
ELF1ENSG00000120690.91462.744001152.349100.344004.385103.43440HepG2AKAP8L
ELF1ENSG00000120690.91520.535001208.942100.330702.201701.49660HepG2ASCC1
ELF1ENSG00000120690.91151.069401598.17190-0.473407.880606.81850HepG2AUH
ELF1ENSG00000120690.91183.412901474.97020-0.317702.344001.78760HepG2BOP1
ELF1ENSG00000120690.91614.608201324.776200.285302.503401.76680HepG2CALR
ELF1ENSG00000120690.91565.918901148.580400.447103.790602.89540HepG2CIRBP
ELF1ENSG00000120690.9815.622101441.83860-0.8219024.1455022.35770HepG2DAZAP1
ELF1ENSG00000120690.91307.63560946.102700.466804.467003.62660HepG2DDX21
ELF1ENSG00000120690.91158.95750925.682400.324102.564601.68760HepG2DDX24
ELF1ENSG00000120690.91171.120901500.02910-0.357102.914901.58740HepG2DDX47
ELF1ENSG00000120690.91519.268601202.337100.337401.973201.44410HepG2DDX6
ELF1ENSG00000120690.9793.136001050.34560-0.405203.363702.28680HepG2DHX30
ELF1ENSG00000120690.9881.658801088.99120-0.304702.825802.11750HepG2DNAJC21
ELF1ENSG00000120690.9916.243701079.43680-0.236502.383301.76930HepG2DNAJC2
ELF1ENSG00000120690.91313.61230932.747000.493903.327902.32430HepG2EEF2
ELF1ENSG00000120690.91324.62140757.260000.806608.110606.63840HepG2EIF3D
ELF1ENSG00000120690.91188.75810893.339900.412103.958102.69080HepG2EIF3G
ELF1ENSG00000120690.92195.576001243.644100.819907.826006.69930HepG2EIF4B
ELF1ENSG00000120690.91489.131901120.790300.409904.161903.13740HepG2EWSR1
ELF1ENSG00000120690.91954.093001535.107700.348102.385001.78680HepG2GPKOW
ELF1ENSG00000120690.9988.893601222.92720-0.306502.138101.51920HepG2HNRNPC
ELF1ENSG00000120690.91221.482801469.50220-0.266702.053401.42900HepG2HNRNPF
ELF1ENSG00000120690.91081.610101313.46280-0.280203.753102.97610HepG2HNRNPL
ELF1ENSG00000120690.91354.990601033.771600.390303.256702.23260HepG2HNRNPM
ELF1ENSG00000120690.9754.066101214.84040-0.688008.015307.02430HepG2HNRNPU
ELF1ENSG00000120690.9776.810801083.53700-0.480106.012504.95850HepG2PPIL4
ELF1ENSG00000120690.91254.984401064.859900.236902.238701.53580HepG2PRPF4
ELF1ENSG00000120690.91448.048901234.282500.230302.115301.62480HepG2PTBP1
ELF1ENSG00000120690.91852.419801448.663000.354604.447703.73520HepG2PUM1
ELF1ENSG00000120690.91621.299201168.208800.472808.934807.93150HepG2PUS1
ELF1ENSG00000120690.92240.566001227.325800.868206.420905.37220HepG2RAVER1
ELF1ENSG00000120690.92699.158401533.613000.8155023.0028021.80010HepG2RBM22
ELF1ENSG00000120690.91523.685601213.191000.328702.876502.19160HepG2RBM25
ELF1ENSG00000120690.91761.693601373.635600.358904.829404.15020HepG2NELFE
ELF1ENSG00000120690.91479.894801279.359200.210001.916801.39070HepG2RECQL
ELF1ENSG00000120690.91197.45100805.041500.572705.131004.09420HepG2RRP9
ELF1ENSG00000120690.9818.738001081.85700-0.402005.337004.49510HepG2SAFB2
ELF1ENSG00000120690.9879.097901201.40910-0.450602.795301.47820HepG2SART3
ELF1ENSG00000120690.92582.447201453.591100.829008.033706.84130HepG2SF3A3
ELF1ENSG00000120690.92226.938601613.456500.464802.642301.87900HepG2SNRNP70
ELF1ENSG00000120690.92727.070601732.181000.6547020.5127019.47770HepG2SRFBP1
ELF1ENSG00000120690.91643.954601341.308100.293403.449702.93670HepG2SRSF1
ELF1ENSG00000120690.91200.915401443.67530-0.265602.196401.56820HepG2SRSF7
ELF1ENSG00000120690.91491.334501091.227300.450607.526406.69720HepG2SRSF9
ELF1ENSG00000120690.91918.415101503.980700.351005.598604.91860HepG2SSB
ELF1ENSG00000120690.91307.684201532.43040-0.228802.895802.26270HepG2SUCLG1
ELF1ENSG00000120690.91296.981101049.872600.304802.098601.49870HepG2SUPV3L1
ELF1ENSG00000120690.9843.698601180.36750-0.484405.706305.03820HepG2TIAL1
ELF1ENSG00000120690.9955.341901191.00180-0.318103.579302.95600HepG2TRIM56
ELF1ENSG00000120690.91650.564601333.185500.308002.524501.69340HepG2TUFM
ELF1ENSG00000120690.91818.508901281.661600.504605.103304.26510HepG2U2AF1
ELF1ENSG00000120690.9381.21800620.25090-0.702204.276103.33200HepG2UCHL5
ELF1ENSG00000120690.9516.82910961.58870-0.895706.363004.79690HepG2UPF2
ELF1ENSG00000120690.9817.858501142.74030-0.482602.933501.79830HepG2XPO5
ELF1ENSG00000120690.9743.320301033.48180-0.475502.919502.17410HepG2XRN2
ELF1ENSG00000120690.9823.791101050.86860-0.351204.232203.42900HepG2ZC3H8
ELF1ENSG00000120690.91827.710201417.778400.366306.879606.11800HepG2ZNF622
ELF1ENSG00000120690.91656.048101069.629600.630505.379203.67050K562AARS
ELF1ENSG00000120690.92073.408402580.27610-0.315502.620501.44070K562ABCF1
ELF1ENSG00000120690.9410.04710736.62610-0.845103.808301.77880K562ADAR
ELF1ENSG00000120690.91297.626701641.43350-0.339104.465903.77540K562AGGF1
ELF1ENSG00000120690.91433.196201803.62860-0.331702.871301.86660K562AKAP8
ELF1ENSG00000120690.91420.381202173.84080-0.614007.557406.66550K562AQR
ELF1ENSG00000120690.9812.778501161.39980-0.514907.829506.18450K562BCLAF1
ELF1ENSG00000120690.91285.446202341.44680-0.865106.722605.01820K562CNOT7
ELF1ENSG00000120690.91919.035302320.24920-0.273902.540501.48090K562CPEB4
ELF1ENSG00000120690.91208.870601600.30190-0.404702.175601.47170K562CPSF6
ELF1ENSG00000120690.9657.05860881.09480-0.423303.728202.47570K562CSTF2
ELF1ENSG00000120690.92534.738403417.94000-0.431306.188104.73850K562CELF1
ELF1ENSG00000120690.9935.245201166.89080-0.319303.037901.76860K562DDX21
ELF1ENSG00000120690.9696.57310947.00280-0.443103.131802.01710K562DDX3X
ELF1ENSG00000120690.9782.179101040.33590-0.411502.790201.57730K562EIF2S1
ELF1ENSG00000120690.92226.048902779.99440-0.320604.101602.96290K562EIF4G2
ELF1ENSG00000120690.9638.93220863.70740-0.434902.900801.57570K562EWSR1
ELF1ENSG00000120690.9789.471601029.25550-0.382603.317801.91510K562EXOSC5
ELF1ENSG00000120690.91220.408101854.76640-0.603907.544406.07710K562FIP1L1
ELF1ENSG00000120690.9983.003001379.87640-0.489302.228101.41200K562FTO
ELF1ENSG00000120690.91257.453801581.26520-0.330602.776801.34100K562G3BP1
ELF1ENSG00000120690.9925.571601562.57880-0.7555015.3263012.99820K562GLRX3
ELF1ENSG00000120690.91046.584301527.96820-0.545902.329801.60040K562GPKOW
ELF1ENSG00000120690.91089.889002185.90010-1.0040011.060809.52290K562GRSF1
ELF1ENSG00000120690.9851.224801293.43210-0.603608.066006.31120K562HNRNPA1
ELF1ENSG00000120690.9528.757801170.85890-1.1469012.1415010.96540K562HNRNPC
ELF1ENSG00000120690.9724.603201045.37180-0.528803.847502.47650K562HNRNPF
ELF1ENSG00000120690.91730.146602169.91540-0.326703.118001.98940K562HNRNPL
ELF1ENSG00000120690.91200.217901525.55850-0.346002.244001.40950K562HNRNPM
ELF1ENSG00000120690.91122.010401432.31790-0.352303.907502.84000K562HNRNPU
ELF1ENSG00000120690.91179.160501653.45500-0.487703.691802.44120K562IGF2BP2
ELF1ENSG00000120690.91312.623501682.00470-0.357703.154901.86040K562IGF2BP3
ELF1ENSG00000120690.9951.480301304.50110-0.455302.715101.79240K562KRR1
ELF1ENSG00000120690.91268.407701734.80840-0.451804.602003.38380K562MATR3
ELF1ENSG00000120690.91125.142101491.43640-0.406602.169501.39310K562METAP2
ELF1ENSG00000120690.92207.184002963.24150-0.425004.155002.77250K562MSI2
ELF1ENSG00000120690.9912.245601642.84430-0.8487023.6494021.62230K562MTPAP
ELF1ENSG00000120690.91199.663901825.36740-0.6056017.4972015.84200K562NSUN2
ELF1ENSG00000120690.9827.827001152.50480-0.477403.877402.06950K562NUSAP1
ELF1ENSG00000120690.91552.207202249.44230-0.535203.092701.77910K562PABPC1
ELF1ENSG00000120690.9885.174401309.21120-0.564705.094703.96420K562PCBP3
ELF1ENSG00000120690.9671.935401004.23250-0.579706.669805.43700K562POLR2G
ELF1ENSG00000120690.91358.805302105.50750-0.631808.088206.51540K562PPIG
ELF1ENSG00000120690.91233.61260896.753500.460004.045303.13710K562PRPF8
ELF1ENSG00000120690.9592.522701049.74020-0.825106.469404.99360K562PSIP1
ELF1ENSG00000120690.91387.385201688.78160-0.283602.468401.83520K562PTBP1
ELF1ENSG00000120690.92421.105503161.15000-0.384805.859804.44650K562PUM2
ELF1ENSG00000120690.91332.466001619.63320-0.281602.042501.32570K562RBM22
ELF1ENSG00000120690.91340.057802132.72430-0.670404.484702.44750K562SBDS
ELF1ENSG00000120690.91285.725001801.14230-0.486307.984906.66040K562SF3A3
ELF1ENSG00000120690.9888.974201202.96220-0.436402.330001.54700K562SF3B4
ELF1ENSG00000120690.9503.37910794.54080-0.658504.014902.47320K562SLBP
ELF1ENSG00000120690.9632.00100907.68920-0.522303.942902.65080K562SRFBP1
ELF1ENSG00000120690.91517.427201845.30650-0.282204.004502.90050K562SRPK2
ELF1ENSG00000120690.91056.139101655.50880-0.648509.858608.53850K562SRSF1
ELF1ENSG00000120690.91223.464001563.35420-0.353702.868001.79630K562SRSF5
ELF1ENSG00000120690.91030.381001237.39570-0.264102.555101.32990K562SSB
ELF1ENSG00000120690.91914.927602646.53200-0.466806.682804.49410K562SUCLG1
ELF1ENSG00000120690.91456.821001007.239700.532307.117405.78460K562SYNCRIP
ELF1ENSG00000120690.91174.334001675.61270-0.512805.192704.20650K562TARDBP
ELF1ENSG00000120690.9589.809801009.70810-0.775606.277204.80970K562TIAL1
ELF1ENSG00000120690.9666.979701072.37500-0.685104.484003.21490K562TRIM56
ELF1ENSG00000120690.91619.786902169.77230-0.421703.697202.03190K562TRIP6
ELF1ENSG00000120690.9696.89630919.06900-0.399202.508901.54380K562UCHL5
ELF1ENSG00000120690.91475.953901935.47420-0.391006.711105.64600K562UPF1
ELF1ENSG00000120690.91468.494901899.43020-0.371202.835701.62020K562UTP3
ELF1ENSG00000120690.91064.824601656.12670-0.637209.459007.79840K562WDR3
ELF1ENSG00000120690.91965.290202575.25080-0.390004.531802.87150K562WRN
ELF1ENSG00000120690.9694.37170935.68240-0.430302.604001.44300K562XRN2
ELF1ENSG00000120690.91706.214302449.07610-0.521406.435205.03300K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ELF1 is not available on ENCORE database.





7 RBPs can affect the splicing of ELF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEELF1ENSG00000120690.9chr13-415933634159356841556118415564184163497341635576-0.246000.000250.03446excludedK562FMR1
SEELF1ENSG00000120690.9chr13-4158829441588485415561184155641841593363415934500.255000.000000.00000includedHepG2U2AF2
SEELF1ENSG00000120690.9chr13-4159336341593568415561184155641841634973416355760.278000.000100.06549includedHepG2HLTF
SEELF1ENSG00000120690.9chr13-415933634159356841556118415564184163497341635576-0.441000.000000.00027excludedHepG2HNRNPA1
SEELF1ENSG00000120690.9chr13-4158829441588357415561184155641841593363415934500.051000.001240.04728includedK562PTBP1
SEELF1ENSG00000120690.9chr13-415933634159356841556118415564184163497341635576-0.355000.000000.00017excludedK562HNRNPC
A3SSELF1ENSG00000120690.9chr13-4152394141524142415239414152410941525464415256040.083000.003680.02208longerK562AQR
A3SSELF1ENSG00000120690.9chr13-4152546441525647415254644152557241532971415331520.103000.000000.00000longerK562AQR
A3SSELF1ENSG00000120690.9chr13-4151708741517302415170874151728041517977415181420.071000.000020.00018longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ELF1 is not avaliable on ENCORE database.