DIXDC1

General Information

Gene Name : DIXDC1
Gene ID : ENSG00000150764.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DIXDC1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DIXDC1	ENSG00000150764.13	0.59	0.56	0.57	ENCSR000AEF
HepG2	DIXDC1	ENSG00000150764.13	6.86	9.56	8.21	ENCSR985KAT
K562	DIXDC1	ENSG00000150764.13	3.36	4.99	4.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DIXDC1 is not avaliable on ENCORE database.

Proteins bound to RNA

DIXDC1 RNA is bound by 7 proteins.

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eCLIP assay for DIXDC1 is not avaliable on ENCORE database.

7 proteins are bound to DIXDC1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	111885000	111885125	+	intron-Distal	3.92632	6.06017	HepG2	QKI
chr11	111845673	111845755	+	3'-UTR,CDS,intron-Proximal	4.19956	5.43815	HepG2	PRPF8
chr11	111808134	111808235	+	5'-UTR,CDS,intron-Distal	3.22500	5.35277	HepG2	DDX3X
chr11	111848022	111848109	+	5'-UTR,intron-Distal	3.03264	4.88713	HepG2	CSTF2T
chr11	111853186	111853249	+	CDS,intron-Proximal	4.34123	4.75655	HepG2	PRPF8
chr11	111866190	111866286	+	CDS	4.35496	4.67689	HepG2	PPIG
chr11	111847605	111847667	+	intron-Distal	3.37360	3.96999	HepG2	CSTF2T
chr11	111863135	111863211	+	CDS,intron-Proximal	4.11182	3.79347	HepG2	GRWD1
chr11	111846420	111846474	+	3'-UTR,intron-Distal	4.09811	3.35169	HepG2	U2AF2
chr11	111851444	111851492	+	CDS,intron-Proximal	3.75288	3.16095	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 10 entries

eCLIP assay for DIXDC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DIXDC1 is not available on ENCORE database.
123 RBPs can affect the levels of DIXDC1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DIXDC1 is not available on ENCORE database.

123 RBPs can affect the gene expression of DIXDC1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DIXDC1	ENSG00000150764.9	330.85540	902.69660	-1.44800	29.73780	27.34470	HepG2	EWSR1
DIXDC1	ENSG00000150764.9	631.09030	1099.11560	-0.80040	17.58560	16.23530	HepG2	SUCLG1
DIXDC1	ENSG00000150764.9	509.74140	961.69070	-0.91580	17.50400	16.16490	HepG2	CELF1
DIXDC1	ENSG00000150764.9	334.73680	811.45540	-1.27750	17.30370	15.73870	HepG2	MAGOH
DIXDC1	ENSG00000150764.9	1310.36180	768.58770	0.76960	16.34960	15.40470	HepG2	SRSF1
DIXDC1	ENSG00000150764.9	395.57680	790.08460	-0.99800	16.27240	14.56880	HepG2	PPIL4
DIXDC1	ENSG00000150764.9	614.94300	1034.09800	-0.74980	16.06310	14.53010	HepG2	DAZAP1
DIXDC1	ENSG00000150764.9	1341.56240	787.11420	0.76920	15.58450	14.49720	HepG2	NELFE
DIXDC1	ENSG00000150764.9	318.04560	698.85020	-1.13570	16.45360	14.47070	HepG2	HNRNPM
DIXDC1	ENSG00000150764.9	409.33060	809.81710	-0.98430	16.61430	14.21790	HepG2	DDX1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 143 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DIXDC1 is not available on ENCORE database.

4 RBPs can affect the splicing of DIXDC1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	DIXDC1	ENSG00000150764.9	chr11	+	111845599	111845787			111845599	111845707	111851461	111851574	0.34100	0.00000	0.00036	longer	K562	PUS1
A3SS	DIXDC1	ENSG00000150764.9	chr11	+	111859662	111859779			111859728	111859779	111857594	111857648	0.07900	0.00117	0.03019	longer	HepG2	U2AF2
SE	DIXDC1	ENSG00000150764.9	chr11	+	111855685	111855797			111853063	111853211	111855955	111856045	-0.24100	0.00128	0.05423	excluded	HepG2	SFPQ
SE	DIXDC1	ENSG00000150764.9	chr11	+	111855685	111855797			111853063	111853211	111855955	111856045	-0.24100	0.00144	0.01923	excluded	HepG2	U2AF2
MXE	DIXDC1	ENSG00000150764.9	chr11	+	111857594	111857648	111859728	111859779	111855955	111856045	111863138	111863243	-0.23300	0.00343	0.06018	2included	HepG2	SRSF1

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DIXDC1

General Information

Functions

Localization

Domains (AlphaFold: DIXDC1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DIXDC1 is not avaliable on ENCORE database.

7 proteins are bound to DIXDC1 RNA:

eCLIP assay for DIXDC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DIXDC1 is not available on ENCORE database.

123 RBPs can affect the gene expression of DIXDC1 :

The Knockdown/knockout RNA-Seq assay for DIXDC1 is not available on ENCORE database.

4 RBPs can affect the splicing of DIXDC1 :

The Knockdown/knockout RNA-Seq assay for DIXDC1 is not avaliable on ENCORE database.