CLUHP3

General Information

Gene Name       : CLUHP3
Gene ID             : ENSG00000131797.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLUHP3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLUHP3ENSG00000131797.127.6913.9610.83ENCSR000AEF
HepG2CLUHP3ENSG00000131797.1237.2429.0633.15ENCSR985KAT
K562CLUHP3ENSG00000131797.1210.1610.4210.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLUHP3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CLUHP3 RNA is bound by 14 proteins.  







eCLIP assay for CLUHP3 is not avaliable on ENCORE database.





14 proteins are bound to CLUHP3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr163171781431717886+intron-Distal,intron-Proximal4.011918.47083HepG2EFTUD2
chr163171851531718629+intron-Distal3.164195.12480HepG2HNRNPK
chr163171865531718691+intron-Distal3.298523.90917HepG2ZC3H11A
chr163171737031717469+intron-Distal,intron-Proximal4.6985244.00561HepG2PRPF8
chr163171378431713843+intron-Distal,intron-Proximal4.616905.59044HepG2SF3B4
chr163171388831713919+intron-Distal4.0515510.24021HepG2PPIG
chr163171805631718108+intron-Distal4.508646.87873HepG2EFTUD2
chr163171686231716905+intron-Distal,intron-Proximal5.432636.68817HepG2EFTUD2
chr163171878931718868+intron-Distal3.002803.12747HepG2QKI
chr163171422731714279+intron-Distal4.086873.91585HepG2PRPF4
chr163171385831713867+intron-Distal4.278408.06490HepG2PPIG
chr163171839031718438+intron-Distal,intron-Proximal3.209658.33414HepG2EFTUD2
chr163171854731718593+intron-Distal3.266453.90917HepG2ZC3H11A
chr163171810831718154+intron-Distal,intron-Proximal3.749477.83468HepG2EFTUD2
chr163171779331717870+intron-Distal,intron-Proximal3.1938515.08989HepG2BUD13
chr163171837631718432+intron-Distal,intron-Proximal3.467205.60807HepG2RBM15
chr163171775131717827+intron-Distal,intron-Proximal3.3558616.08350HepG2PPIG
chr163171781631717867+intron-Distal,intron-Proximal3.4849713.26607HepG2PRPF8
chr163171753831717592+intron-Distal,intron-Proximal3.190417.59371HepG2EFTUD2
chr163171409631714154+intron-Distal,intron-Proximal3.977147.75469HepG2EFTUD2
chr163171699631717005+intron-Proximal3.953167.55042HepG2PPIG
chr163171819431718262+intron-Proximal4.558915.81621HepG2SRSF1
chr163171734231717370+intron-Proximal5.5971940.41932HepG2PRPF8
chr163171734931717399+intron-Proximal3.450884.63311K562AQR
chr163171737331717413+intron-Proximal3.636476.26812HepG2EFTUD2
chr163171207131712108+intron-Proximal3.073499.01982HepG2PRPF8
chr163171680031716846+intron-Proximal4.861726.38747HepG2AQR
chr163171550631715578+intron-Proximal3.8144013.55166HepG2BUD13
chr163171464531714702+intron-Proximal4.4547530.33066HepG2PRPF8
chr163171661031716657+intron-Proximal4.594054.27476HepG2AQR
chr163171830031718356+intron-Proximal3.410857.38941HepG2GRWD1
chr163171548831715540+intron-Proximal3.966008.03271HepG2SF3A3
chr163171815431718208+intron-Proximal3.7450615.56714HepG2EFTUD2
chr163171661531716670+intron-Proximal4.6504612.27453HepG2SF3B4
chr163171470231714735+intron-Proximal4.8789622.90413HepG2PRPF8
chr163171724131717336+intron-Proximal3.060855.35593HepG2SRSF1
chr163171464431714688+intron-Proximal3.1334611.02664HepG2PPIG
chr163171828331718356+intron-Proximal3.4421521.58173HepG2PPIG
chr163171696431717014+intron-Proximal3.148415.54036HepG2AQR
chr163171470431714726+intron-Proximal3.074993.69585HepG2AQR
chr163171734131717403+intron-Proximal4.1267610.09513HepG2AQR
chr163171726831717330+intron-Proximal3.076629.85276HepG2GRWD1
chr163171549431715564+intron-Proximal4.624755.25202HepG2AQR
chr163171812831718210+intron-Proximal3.365548.59638HepG2SF3A3
chr163171569731715755+intron-Proximal3.5675912.75073HepG2PRPF8
chr163171676331716793+intron-Proximal5.1999616.24695HepG2PPIG
chr163171205931712071+intron-Proximal3.066726.02950HepG2PRPF8
chr163171812931718206+intron-Proximal3.6257216.24230HepG2BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLUHP3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLUHP3 is not available on ENCORE database.

  • 104 RBPs can affect the levels of CLUHP3.  








The Knockdown/knockout RNA-Seq assay for CLUHP3 is not available on ENCORE database.





104 RBPs can affect the gene expression of CLUHP3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLUHP3ENSG00000131797.8370.00380651.78120-0.816806.187704.65470HepG2AATF
CLUHP3ENSG00000131797.81517.528901002.048200.598705.449304.17830HepG2ABCF1
CLUHP3ENSG00000131797.8454.36880931.44070-1.0356024.7420023.33590HepG2ACO1
CLUHP3ENSG00000131797.8930.79570485.572700.9387012.1789010.30050HepG2ADAR
CLUHP3ENSG00000131797.8285.84160880.99890-1.6239023.2774021.90160HepG2AKAP1
CLUHP3ENSG00000131797.8518.08050872.94980-0.752705.262003.84150HepG2AKAP8
CLUHP3ENSG00000131797.81004.018901179.36390-0.232202.204801.57930HepG2AUH
CLUHP3ENSG00000131797.81079.71930609.496600.824908.258606.81270HepG2BCLAF1
CLUHP3ENSG00000131797.81090.96120692.541300.655506.396305.25430HepG2CIRBP
CLUHP3ENSG00000131797.81491.88480931.190500.6799017.1754015.82520HepG2CKAP4
CLUHP3ENSG00000131797.8762.47440458.275500.734407.056405.99750HepG2CPSF6
CLUHP3ENSG00000131797.8655.46360497.953900.396402.263001.34420HepG2YBX3
CLUHP3ENSG00000131797.8585.62010433.238800.434702.560001.52150HepG2CSTF2
CLUHP3ENSG00000131797.8564.25770868.14050-0.621608.197307.20170HepG2CELF1
CLUHP3ENSG00000131797.81168.51220933.387000.324004.297803.40710HepG2DAZAP1
CLUHP3ENSG00000131797.81164.15830861.427200.434406.767305.55130HepG2DDX19B
CLUHP3ENSG00000131797.8665.06660498.638600.415403.383702.10050HepG2DDX1
CLUHP3ENSG00000131797.81159.88770718.265400.691308.645307.51680HepG2DDX21
CLUHP3ENSG00000131797.8890.79390703.580100.340302.633501.74410HepG2DDX24
CLUHP3ENSG00000131797.8519.95710689.74360-0.407702.360601.63980HepG2DDX55
CLUHP3ENSG00000131797.8999.88530753.853500.407402.988101.94210HepG2DDX5
CLUHP3ENSG00000131797.8424.21380725.02480-0.773206.191405.29670HepG2DDX6
CLUHP3ENSG00000131797.8969.84680471.586301.040106.483305.03220HepG2DHX30
CLUHP3ENSG00000131797.81525.12350891.124000.7751014.2679012.97970HepG2DKC1
CLUHP3ENSG00000131797.8612.42700488.939200.324802.313901.66470HepG2DNAJC21
CLUHP3ENSG00000131797.8767.76550484.642400.6636010.829109.63590HepG2DNAJC2
CLUHP3ENSG00000131797.8999.90300701.979600.510303.903602.82530HepG2EEF2
CLUHP3ENSG00000131797.8409.40200569.79910-0.476902.833801.92070HepG2EIF3D
CLUHP3ENSG00000131797.82496.89950770.072401.6970036.8182034.52200HepG2EIF4A3
CLUHP3ENSG00000131797.81036.91110749.876300.467502.553701.89120HepG2EIF4B
CLUHP3ENSG00000131797.81262.10080920.910100.454606.681805.48350HepG2EIF4G1
CLUHP3ENSG00000131797.81337.57400867.863200.624006.486104.89610HepG2ESF1
CLUHP3ENSG00000131797.81761.435501354.106400.379305.206604.42860HepG2ETF1
CLUHP3ENSG00000131797.8359.82380509.36150-0.501403.965302.53850HepG2FAM120A
CLUHP3ENSG00000131797.8626.755101011.77480-0.690905.966804.87780HepG2FIP1L1
CLUHP3ENSG00000131797.8829.38030459.097200.853103.593902.43070HepG2FTO
CLUHP3ENSG00000131797.81035.57080558.006600.8920012.2363010.64320HepG2FUBP3
CLUHP3ENSG00000131797.8944.83870720.819700.390302.374801.75530HepG2G3BP1
CLUHP3ENSG00000131797.81522.57960765.354500.9922014.8793012.84490HepG2G3BP2
CLUHP3ENSG00000131797.8811.10750507.317100.676906.020904.69620HepG2GEMIN5
CLUHP3ENSG00000131797.81024.53770519.443300.9798011.2848010.05980HepG2GPKOW
CLUHP3ENSG00000131797.81632.94140493.623601.7259048.6423046.63840HepG2HNRNPA1
CLUHP3ENSG00000131797.81120.08750549.071801.0284016.0489014.51490HepG2HNRNPC
CLUHP3ENSG00000131797.8970.40060622.470300.640502.346701.68250HepG2HNRNPF
CLUHP3ENSG00000131797.81182.62640730.095300.695707.810506.68330HepG2HNRNPK
CLUHP3ENSG00000131797.8932.16630495.718600.911004.745203.94280HepG2HNRNPLL
CLUHP3ENSG00000131797.81207.03770612.943100.9775017.4754015.83330HepG2IGF2BP1
CLUHP3ENSG00000131797.81325.40390732.667000.8551010.530209.30300HepG2IGF2BP2
CLUHP3ENSG00000131797.8791.51620557.148900.506507.080005.96390HepG2ILF2
CLUHP3ENSG00000131797.81114.99430736.994800.597204.219602.95840HepG2KHSRP
CLUHP3ENSG00000131797.81066.19180813.402700.390302.174401.44620HepG2LARP4
CLUHP3ENSG00000131797.8480.99650682.51580-0.504804.197702.79440HepG2LARP7
CLUHP3ENSG00000131797.8952.97880716.499000.411402.876801.63860HepG2LIN28B
CLUHP3ENSG00000131797.81879.08580777.405701.2732023.3046021.51370HepG2MAGOH
CLUHP3ENSG00000131797.8405.41140596.30950-0.556702.821101.75800HepG2METAP2
CLUHP3ENSG00000131797.8894.54130505.672800.822803.924802.75830HepG2MTPAP
CLUHP3ENSG00000131797.81058.72770800.122800.403902.565701.95350HepG2NCBP2
CLUHP3ENSG00000131797.8951.94340439.584001.1146012.3919010.91960HepG2NSUN2
CLUHP3ENSG00000131797.8968.34350712.462600.442603.041402.28660HepG2PABPC4
CLUHP3ENSG00000131797.8433.45340539.88480-0.316802.143301.39030HepG2PARN
CLUHP3ENSG00000131797.8785.88650486.488800.691809.536908.21160HepG2PPIL4
CLUHP3ENSG00000131797.81106.21860709.154100.6414010.759009.37790HepG2PRPF4
CLUHP3ENSG00000131797.81697.50320883.538600.941906.172305.32850HepG2PUF60
CLUHP3ENSG00000131797.81585.83750948.725800.7411019.3668018.00290HepG2PUS1
CLUHP3ENSG00000131797.81145.78860781.447000.552007.006706.07800HepG2QKI
CLUHP3ENSG00000131797.8239.81160719.91480-1.5859014.0648012.58670HepG2RAVER1
CLUHP3ENSG00000131797.8611.941201084.14820-0.8251012.6679011.04260HepG2RBM15
CLUHP3ENSG00000131797.8954.747701131.77430-0.245402.093301.62610HepG2RBM22
CLUHP3ENSG00000131797.8634.92420823.02020-0.374302.707101.72410HepG2RBM27
CLUHP3ENSG00000131797.81043.03150803.022600.377203.785003.17120HepG2NELFE
CLUHP3ENSG00000131797.81079.86570747.924600.529807.545106.60060HepG2RECQL
CLUHP3ENSG00000131797.8871.95040395.417201.1408011.7655010.16000HepG2RPS3A
CLUHP3ENSG00000131797.8592.57110774.81960-0.386902.702101.63980HepG2RPS5
CLUHP3ENSG00000131797.8718.64360490.636000.550504.391203.52000HepG2SF3B1
CLUHP3ENSG00000131797.81139.99780751.220700.601609.661908.65610HepG2SF3B4
CLUHP3ENSG00000131797.81181.51560847.227200.479708.205107.09480HepG2SLBP
CLUHP3ENSG00000131797.8278.08340545.92850-0.973203.377702.50940HepG2SNRNP70
CLUHP3ENSG00000131797.8702.563201278.28310-0.8635020.7585019.71900HepG2SRFBP1
CLUHP3ENSG00000131797.81078.78190784.120600.460206.092805.45800HepG2SRSF1
CLUHP3ENSG00000131797.8954.85230611.599300.642603.497702.72830HepG2SRSF7
CLUHP3ENSG00000131797.8413.47600637.93150-0.625607.630406.79690HepG2SRSF9
CLUHP3ENSG00000131797.82636.685801109.827301.2483060.7572059.13680HepG2SSB
CLUHP3ENSG00000131797.8915.34040675.583100.438102.565201.36760HepG2STAU1
CLUHP3ENSG00000131797.8719.29300483.298700.573604.129903.26610HepG2TARDBP
CLUHP3ENSG00000131797.81650.31600930.216100.827004.212102.91480HepG2TBRG4
CLUHP3ENSG00000131797.81228.58770529.972201.2129028.8055027.50800HepG2TIAL1
CLUHP3ENSG00000131797.8296.20660405.56180-0.453302.531401.80580HepG2UCHL5
CLUHP3ENSG00000131797.81671.714701308.754100.353005.334504.41590HepG2UPF1
CLUHP3ENSG00000131797.8872.25560628.599400.472502.246201.34860HepG2UPF2
CLUHP3ENSG00000131797.8433.91450708.14330-0.706604.283102.70480HepG2XRCC5
CLUHP3ENSG00000131797.81258.80790675.872700.8971010.388909.00240HepG2XRN2
CLUHP3ENSG00000131797.8152.23960307.99210-1.016508.754707.82090K562AGGF1
CLUHP3ENSG00000131797.8208.87500338.39730-0.696104.877203.48470K562AKAP8
CLUHP3ENSG00000131797.8147.63770320.47000-1.118109.517608.21890K562AKAP8L
CLUHP3ENSG00000131797.8247.93940336.23190-0.439502.141501.34500K562ATP5C1
CLUHP3ENSG00000131797.8263.03740344.90950-0.390902.322401.52960K562DKC1
CLUHP3ENSG00000131797.8235.06270323.17130-0.459302.600601.89840K562EIF2S2
CLUHP3ENSG00000131797.8303.05610152.371700.991904.782503.70300K562EIF4A3
CLUHP3ENSG00000131797.8158.88200229.95720-0.533402.144601.38810K562FMR1
CLUHP3ENSG00000131797.8236.60130158.457600.578302.786302.17920K562FXR1
CLUHP3ENSG00000131797.862.99300106.19050-0.753402.101901.49730K562G3BP2
CLUHP3ENSG00000131797.8443.96690201.119001.1423011.8713010.70860K562HNRNPC
CLUHP3ENSG00000131797.8175.60580340.13270-0.953806.342804.97610K562KIF1C
CLUHP3ENSG00000131797.8205.88170381.02980-0.888107.452705.81720K562MBNL1
CLUHP3ENSG00000131797.8103.66150267.07130-1.365308.433106.55740K562NAA15
CLUHP3ENSG00000131797.8162.90490240.87730-0.564302.334001.64300K562PRPF8
CLUHP3ENSG00000131797.8265.23750180.321400.556602.257201.44820K562PSIP1
CLUHP3ENSG00000131797.8132.93290317.88760-1.257809.871508.89380K562PUS1
CLUHP3ENSG00000131797.8148.40650309.67620-1.061209.157208.10210K562RBM15
CLUHP3ENSG00000131797.8262.62510161.590800.700602.325001.67340K562TARDBP
CLUHP3ENSG00000131797.8247.41340173.440700.512402.107101.30230K562TIAL1
CLUHP3ENSG00000131797.8177.75300322.23480-0.858203.873102.25360K562UTP18
CLUHP3ENSG00000131797.8400.61910280.470700.514303.314002.39570K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLUHP3 is not available on ENCORE database.





10 RBPs can affect the splicing of CLUHP3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECLUHP3ENSG00000131797.8chr16+317138553171400231711955317120593171447631714688-0.185000.000710.01540excludedHepG2U2AF1
SECLUHP3ENSG00000131797.8chr16+317129833171317931711910317120593171385531714002-0.592000.000020.02449excludedK562UTP3
SECLUHP3ENSG00000131797.8chr16+3171774131717822317172103171731531718211317186720.562000.001040.07639includedHepG2TBRG4
SECLUHP3ENSG00000131797.8chr16+317179023171809731717741317177753171821131718672-0.340000.000330.03386excludedHepG2QKI
SECLUHP3ENSG00000131797.8chr16+317138553171400231711955317120593171447631714688-0.081000.002170.02699excludedHepG2U2AF2
SECLUHP3ENSG00000131797.8chr16+3171790231718097317172103171735531718211317182970.115000.000220.01290includedHepG2MATR3
SECLUHP3ENSG00000131797.8chr16+317138553171400231711955317120593171447631714688-0.275000.000010.00380excludedHepG2PCBP2
SECLUHP3ENSG00000131797.8chr16+3171774631717822317172103171735531718211317187430.096000.005460.09416includedHepG2SRSF1
SECLUHP3ENSG00000131797.8chr16+317138553171400231711955317120593171447631714688-0.178000.000010.00056excludedHepG2SF3A3
SECLUHP3ENSG00000131797.8chr16+3171298331713179317119103171205931713855317140020.466000.000260.07131includedHepG2DROSHA

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CLUHP3 is not avaliable on ENCORE database.