ARCN1

General Information

Gene Name       : ARCN1
Gene ID             : ENSG00000095139.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ARCN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARCN1ENSG00000095139.13113.90103.46108.68ENCSR000AEF
HepG2ARCN1ENSG00000095139.1399.90116.44108.17ENCSR985KAT
K562ARCN1ENSG00000095139.1378.8084.5281.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARCN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARCN1 RNA is bound by 32 proteins.  







eCLIP assay for ARCN1 is not avaliable on ENCORE database.





32 proteins are bound to ARCN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11118472746118472809+3'-UTR4.8596610.43183HepG2IGF2BP1
chr11118472753118472802+3'-UTR5.3343112.54137K562IGF2BP1
chr11118471967118472021+3'-UTR,intron-Distal4.417188.90822K562TIA1
chr11118473518118473555+3'-UTR4.5153729.50769K562UPF1
chr11118471853118471910+3'-UTR,intron-Distal3.560017.57190HepG2UPF1
chr11118472211118472255+3'-UTR,intron-Distal,intron-Proximal4.0078822.08568K562TIA1
chr11118472882118473005+3'-UTR4.2584429.38828HepG2PCBP2
chr11118472208118472259+3'-UTR,intron-Distal,intron-Proximal3.178306.36786K562IGF2BP1
chr11118472375118472407+3'-UTR,CDS4.2269610.40239K562IGF2BP1
chr11118472894118472980+3'-UTR3.0856414.71148K562TIA1
chr11118472905118472976+3'-UTR3.8336015.06707K562IGF2BP1
chr11118473449118473475+3'-UTR5.6450329.94290K562UPF1
chr11118472433118472479+3'-UTR,CDS5.3298725.16864K562IGF2BP1
chr11118472672118472747+3'-UTR4.155418.16443HepG2IGF2BP3
chr11118472301118472349+3'-UTR,intron-Proximal3.8548411.22658K562FAM120A
chr11118472747118472803+3'-UTR3.123053.67661K562IGF2BP2
chr11118471791118471839+3'-UTR,intron-Distal3.394875.56056K562AKAP1
chr11118473656118473705+3'-UTR4.285224.70168K562CSTF2T
chr11118472840118472887+3'-UTR3.575225.91048K562IGF2BP1
chr11118471790118471838+3'-UTR,intron-Distal3.947075.63582HepG2TIAL1
chr11118472255118472278+3'-UTR,intron-Proximal4.2216210.53715K562TIA1
chr11118472976118473044+3'-UTR4.1817619.64576K562IGF2BP1
chr11118471797118471804+3'-UTR,intron-Distal4.1991919.68738K562TIA1
chr11118472178118472207+3'-UTR,intron-Distal3.016215.50590K562TIA1
chr11118472661118472747+3'-UTR4.3862111.59134K562IGF2BP2
chr11118473105118473154+3'-UTR3.1168111.56740K562FAM120A
chr11118472916118472977+3'-UTR3.0995317.91973K562FAM120A
chr11118472540118472592+3'-UTR3.6480534.02397K562UPF1
chr11118471628118471696+3'-UTR,intron-Distal3.6509134.80033K562UPF1
chr11118471804118471842+3'-UTR,intron-Distal4.4272324.16516K562TIA1
chr11118472875118473078+3'-UTR4.8609628.15802HepG2UPF1
chr11118473175118473245+3'-UTR4.3720220.43514K562YBX3
chr11118471607118471719+3'-UTR,intron-Distal3.989556.88718HepG2AKAP1
chr11118472250118472273+3'-UTR,intron-Distal,intron-Proximal4.7442539.66310K562UPF1
chr11118473109118473161+3'-UTR3.319346.13914K562IGF2BP2
chr11118473023118473073+3'-UTR3.329967.97214HepG2AKAP1
chr11118472944118472972+3'-UTR3.0057030.77510K562UPF1
chr11118472225118472259+3'-UTR,intron-Distal,intron-Proximal3.923969.58386K562IGF2BP2
chr11118473088118473152+3'-UTR5.2386249.07753K562UPF1
chr11118473429118473497+3'-UTR4.3069512.58917HepG2SUB1
chr11118473371118473411+3'-UTR4.6232132.32703K562UPF1
chr11118472888118472964+3'-UTR3.680665.85073HepG2IGF2BP1
chr11118472682118472753+3'-UTR4.317379.65383K562IGF2BP1
chr11118472392118472448+3'-UTR,CDS4.972797.69327HepG2UPF1
chr11118473033118473075+3'-UTR4.714484.78334K562IGF2BP2
chr11118472174118472199+3'-UTR,intron-Distal3.1806120.04017K562UPF1
chr11118472093118472132+3'-UTR,intron-Distal5.5861829.00684K562UPF1
chr11118473272118473355+3'-UTR5.1564869.45817K562UPF1
chr11118472390118472476+3'-UTR,CDS4.4327120.49272K562FAM120A
chr11118472610118472682+3'-UTR4.5698210.90921K562IGF2BP1
chr11118473115118473146+3'-UTR5.025567.30074K562IGF2BP1
chr11118473650118473725+3'-UTR3.114463.13903HepG2CSTF2
chr11118472752118472803+3'-UTR3.518534.75710HepG2IGF2BP3
chr11118471791118471823+3'-UTR,intron-Distal4.58350400.00000K562UPF1
chr11118472209118472225+3'-UTR,intron-Distal4.299129.02139K562IGF2BP2
chr11118471552118471606+3'-UTR,intron-Distal4.1836010.58147K562IGF2BP2
chr11118473195118473224+3'-UTR4.043803.92497HepG2UPF1
chr11118472169118472239+3'-UTR,intron-Distal4.182553.88726HepG2TIAL1
chr11118472199118472225+3'-UTR,intron-Distal3.2937444.08977K562UPF1
chr11118472209118472239+3'-UTR,intron-Distal3.6867915.22156K562FAM120A
chr11118471791118471848+3'-UTR,intron-Distal4.764684.25353HepG2TIA1
chr11118472182118472254+3'-UTR,intron-Distal,intron-Proximal4.220177.31670HepG2UPF1
chr11118471544118471594+3'-UTR,intron-Distal3.636014.27354HepG2UPF1
chr11118472414118472464+3'-UTR,CDS4.168654.09351K562IGF2BP2
chr11118472278118472301+3'-UTR,intron-Proximal4.332826.87998K562TIA1
chr11118473306118473363+3'-UTR3.3245712.49167K562FAM120A
chr11118472539118472607+3'-UTR4.6804013.65191K562IGF2BP1
chr11118473208118473232+3'-UTR4.5756422.51241K562UPF1
chr11118471823118471849+3'-UTR,intron-Distal4.59365400.00000K562UPF1
chr11118472964118473023+3'-UTR3.930369.18836HepG2AKAP1
chr11118471791118471834+3'-UTR,intron-Distal3.256494.01831HepG2AKAP1
chr11118473060118473077+3'-UTR3.7214231.70130K562UPF1
chr11118471967118472017+3'-UTR,intron-Distal4.552965.93974HepG2UPF1
chr11118471787118471853+3'-UTR,intron-Distal5.2247719.63494HepG2UPF1
chr11118472655118472746+3'-UTR4.4387514.79709HepG2IGF2BP1
chr11118472286118472332+3'-UTR,intron-Proximal5.1882955.71164K562UPF1
chr11118472409118472462+3'-UTR,CDS3.8396439.04034K562UPF1
chr11118472407118472433+3'-UTR,CDS4.9743419.23134K562IGF2BP1
chr11118473276118473340+3'-UTR5.172498.87118HepG2UPF1
chr11118472089118472124+3'-UTR,intron-Distal3.974093.72123HepG2AKAP1
chr11118471791118471852+3'-UTR,intron-Distal4.2723427.95869K562FAM120A
chr11118473365118473430+3'-UTR3.586875.38431K562LIN28B
chr11118472225118472250+3'-UTR,intron-Distal3.5982243.12605K562UPF1
chr11118473028118473060+3'-UTR3.9905667.35676K562UPF1
chr11118471555118471609+3'-UTR,intron-Distal5.100688.52511HepG2IGF2BP3
chr11118471620118471713+3'-UTR,intron-Distal5.134207.39978HepG2UPF1
chr11118472972118473028+3'-UTR4.1659686.86976K562UPF1
chr11118471541118471612+3'-UTR,intron-Distal4.2318212.90375HepG2IGF2BP1
chr11118472977118473027+3'-UTR3.8164120.14959K562FAM120A
chr11118473030118473071+3'-UTR3.4914923.31962K562FAM120A
chr11118472259118472291+3'-UTR,intron-Proximal3.228645.39469K562IGF2BP1
chr11118443134118443209+5'-UTR3.143015.52272HepG2DDX3X
chr11118443131118443206+5'-UTR4.6350624.76576K562DDX3X
chr11118443180118443265+5'-UTR,CDS3.712154.64637K562FXR2
chr11118443206118443266+5'-UTR,CDS,intron-Proximal3.7716419.80607K562DDX3X
chr11118443176118443240+5'-UTR3.577067.10368K562GEMIN5
chr11118443136118443258+5'-UTR3.9334213.30221K562PCBP1
chr11118443209118443265+5'-UTR,CDS3.308304.45833HepG2DDX3X
chr11118463454118463534+CDS,intron-Distal3.4426013.10126HepG2BCLAF1
chr11118455265118455335+CDS,intron-Distal4.0135414.86678K562UCHL5
chr11118461056118461071+CDS,intron-Distal3.635626.43326K562UCHL5
chr11118464375118464413+CDS,intron-Distal3.121776.01489HepG2GRWD1
chr11118461086118461138+CDS,intron-Distal3.627185.95144K562FXR2
chr11118454616118454676+CDS,intron-Distal3.4141612.26819K562UCHL5
chr11118455315118455343+CDS,intron-Distal3.4716716.90717K562PUM2
chr11118468459118468509+CDS,intron-Distal3.997446.15459HepG2GRWD1
chr11118454569118454616+CDS,intron-Distal3.4925510.92329HepG2BCLAF1
chr11118452108118452147+CDS,intron-Distal,intron-Proximal3.832177.43382K562PUM2
chr11118453893118453921+CDS,intron-Distal,intron-Proximal3.452944.47362HepG2G3BP1
chr11118455335118455358+CDS,intron-Distal4.357718.23108K562UCHL5
chr11118461060118461221+CDS,intron-Distal3.1594113.52610K562PUM1
chr11118451959118451999+CDS,intron-Distal,intron-Proximal3.062816.86050K562DDX3X
chr11118464375118464414+CDS,intron-Distal,intron-Proximal3.039117.11573HepG2BCLAF1
chr11118452191118452224+CDS,intron-Distal,intron-Proximal3.736255.14242HepG2G3BP1
chr11118455266118455339+CDS,intron-Distal3.262167.47223K562ZNF800
chr11118454558118454610+CDS,intron-Distal3.152284.58091HepG2GRWD1
chr11118464364118464413+CDS,intron-Distal3.191854.29961K562METAP2
chr11118464388118464409+CDS,intron-Distal3.072655.41277K562UCHL5
chr11118454617118454688+CDS,intron-Distal4.4527018.15737K562ZNF622
chr11118468422118468459+CDS,intron-Distal3.226977.47194HepG2GRWD1
chr11118461060118461073+CDS,intron-Distal4.957786.37937HepG2BCLAF1
chr11118453967118454018+CDS,intron-Distal3.4872010.12226HepG2GRWD1
chr11118454688118454728+CDS,intron-Distal3.418447.28455K562ZNF622
chr11118454609118454721+CDS,intron-Distal3.016809.69060HepG2G3BP1
chr11118471339118471382+CDS,intron-Distal,intron-Proximal3.477124.59151HepG2G3BP1
chr11118454623118454683+CDS,intron-Distal3.9054512.40202HepG2GRWD1
chr11118453965118454031+CDS,intron-Distal3.178176.11586HepG2G3BP1
chr11118454031118454072+CDS,intron-Distal4.441924.15726HepG2G3BP1
chr11118461199118461253+CDS,intron-Distal,intron-Proximal4.088363.86479HepG2PRPF8
chr11118451961118451985+CDS,intron-Distal3.914473.67596K562GRWD1
chr11118461058118461214+CDS,intron-Distal3.0990218.55480K562ZNF800
chr11118454620118454680+CDS,intron-Distal3.2967713.88602K562ZNF800
chr11118463532118463540+CDS,intron-Distal4.1618514.59237K562YBX3
chr11118464306118464361+CDS,intron-Distal3.9022810.47889K562UCHL5
chr11118461182118461221+CDS,intron-Distal3.1705912.05468K562ZNF622
chr11118461074118461192+CDS,intron-Distal3.170638.72097HepG2G3BP1
chr11118454616118454674+CDS,intron-Distal3.3674311.76394HepG2BCLAF1
chr11118452002118452061+CDS,intron-Distal5.294885.08593K562FXR2
chr11118452016118452059+CDS,intron-Distal3.970997.91821HepG2GRWD1
chr11118452143118452173+CDS,intron-Distal,intron-Proximal3.977123.11282HepG2G3BP1
chr11118461072118461149+CDS,intron-Distal3.287509.97208HepG2GRWD1
chr11118454022118454073+CDS,intron-Distal3.463693.58206K562LIN28B
chr11118463461118463543+CDS,intron-Distal4.0203213.45401HepG2GRWD1
chr11118455344118455359+CDS,intron-Distal4.0793527.87989K562PUM2
chr11118461076118461171+CDS,intron-Distal3.925905.38431K562LIN28B
chr11118455270118455310+CDS,intron-Distal4.020294.25199K562GRWD1
chr11118461079118461220+CDS,intron-Distal3.8515932.21000HepG2BCLAF1
chr11118464411118464427+CDS,intron-Distal,intron-Proximal3.181374.38107K562AQR
chr11118454018118454073+CDS,intron-Distal3.220156.07026HepG2GRWD1
chr11118455194118455217+CDS,intron-Distal,intron-Proximal3.158347.15230K562UCHL5
chr11118468421118468480+CDS,intron-Distal,intron-Proximal3.1877110.73945HepG2BCLAF1
chr11118463451118463550+CDS,intron-Distal3.811965.05732HepG2ZNF800
chr11118455254118455341+CDS,intron-Distal3.9488213.36544HepG2BCLAF1
chr11118461149118461219+CDS,intron-Distal4.0254412.61417HepG2GRWD1
chr11118461054118461106+CDS,intron-Distal,intron-Proximal3.6420923.87654K562PUM2
chr11118443524118443596+intron-Distal4.568964.82934K562RBM15
chr11118454945118455048+intron-Distal4.034533.48768HepG2KHSRP
chr11118454939118455051+intron-Distal5.052469.23289K562KHSRP
chr11118445189118445286+intron-Distal4.455775.04993HepG2QKI
chr11118464427118464454+intron-Distal,intron-Proximal4.973854.13847K562AQR
chr11118443315118443360+intron-Proximal3.383113.04831K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARCN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARCN1 is not available on ENCORE database.

  • 98 RBPs can affect the levels of ARCN1.  








The Knockdown/knockout RNA-Seq assay for ARCN1 is not available on ENCORE database.





98 RBPs can affect the gene expression of ARCN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARCN1ENSG00000095139.92007.746003409.22620-0.7639014.2234012.07660HepG2AATF
ARCN1ENSG00000095139.94571.408106547.14390-0.518205.935704.61140HepG2ABCF1
ARCN1ENSG00000095139.93688.620404622.71610-0.325707.110906.22930HepG2ACO1
ARCN1ENSG00000095139.93050.261404300.79420-0.495705.695004.33230HepG2ADAR
ARCN1ENSG00000095139.93841.221505240.90610-0.448303.902402.66930HepG2AKAP8
ARCN1ENSG00000095139.93760.271704644.41640-0.304705.374304.33950HepG2AKAP8L
ARCN1ENSG00000095139.93074.161505404.60480-0.8140013.0158011.42130HepG2ASCC1
ARCN1ENSG00000095139.95802.199806921.16630-0.254404.368703.54110HepG2AUH
ARCN1ENSG00000095139.93058.556903960.91920-0.373002.551401.65390HepG2BCCIP
ARCN1ENSG00000095139.94535.251806249.89390-0.462605.942205.10540HepG2BOP1
ARCN1ENSG00000095139.95469.110107220.43240-0.400802.764401.78990HepG2CCAR1
ARCN1ENSG00000095139.93494.289205134.74120-0.555306.801705.62420HepG2CIRBP
ARCN1ENSG00000095139.92876.084904621.68920-0.6843031.4517029.75940HepG2CKAP4
ARCN1ENSG00000095139.92771.977304002.69160-0.530103.250102.41560HepG2CNOT7
ARCN1ENSG00000095139.91674.877102446.74050-0.546806.486404.94240HepG2CSTF2
ARCN1ENSG00000095139.93237.208904275.33990-0.4013010.464409.04710HepG2DDX19B
ARCN1ENSG00000095139.93149.998103761.94700-0.256102.183901.57340HepG2DDX21
ARCN1ENSG00000095139.92787.231603406.02140-0.289302.829401.45850HepG2DDX52
ARCN1ENSG00000095139.92809.555603894.36690-0.471003.895302.99320HepG2DDX55
ARCN1ENSG00000095139.93458.382404422.68090-0.354807.074506.08720HepG2DKC1
ARCN1ENSG00000095139.93753.894204292.38420-0.193403.267302.56880HepG2DNAJC2
ARCN1ENSG00000095139.92833.026403552.25470-0.326403.751802.51810HepG2EIF3G
ARCN1ENSG00000095139.94245.087205710.28380-0.427803.498002.78110HepG2EIF4A3
ARCN1ENSG00000095139.93888.839405542.21430-0.511106.680905.44140HepG2EIF4G2
ARCN1ENSG00000095139.94566.786607946.39810-0.7991036.1587034.43400HepG2ETF1
ARCN1ENSG00000095139.93616.628804517.19990-0.320803.465802.52850HepG2EWSR1
ARCN1ENSG00000095139.94481.947706611.10380-0.560805.726004.65770HepG2FIP1L1
ARCN1ENSG00000095139.92666.575003716.70050-0.479006.743005.54720HepG2FUBP3
ARCN1ENSG00000095139.93049.707505344.52820-0.8094011.5696010.25590HepG2G3BP1
ARCN1ENSG00000095139.93971.151105673.81720-0.514805.950104.63200HepG2G3BP2
ARCN1ENSG00000095139.92367.899402937.30230-0.310902.520501.67000HepG2GEMIN5
ARCN1ENSG00000095139.92811.844903679.79560-0.388103.029901.96080HepG2GNB2L1
ARCN1ENSG00000095139.93762.586706504.56050-0.7897011.2881010.06280HepG2GPKOW
ARCN1ENSG00000095139.92730.741303705.06600-0.440202.665201.57440HepG2GRSF1
ARCN1ENSG00000095139.92818.408304372.23070-0.6335011.1630010.00070HepG2HNRNPA1
ARCN1ENSG00000095139.94540.709505389.55850-0.247203.819102.74750HepG2HNRNPA2B1
ARCN1ENSG00000095139.93008.280704863.25970-0.6930012.7342011.34530HepG2HNRNPC
ARCN1ENSG00000095139.93912.369906207.39750-0.665909.892708.78640HepG2HNRNPLL
ARCN1ENSG00000095139.93470.311604831.10960-0.4773012.9973011.76210HepG2HNRNPU
ARCN1ENSG00000095139.94163.359305432.61910-0.383903.482802.73360HepG2IGF2BP2
ARCN1ENSG00000095139.94463.623404934.82510-0.144802.181301.52140HepG2ILF2
ARCN1ENSG00000095139.94059.725205464.24350-0.428603.043701.98480HepG2KHSRP
ARCN1ENSG00000095139.93709.706904225.72830-0.187903.057401.98830HepG2KIF1C
ARCN1ENSG00000095139.94518.752505795.60140-0.359002.698502.07470HepG2MATR3
ARCN1ENSG00000095139.94383.855205815.18320-0.407606.999505.79450HepG2NOL12
ARCN1ENSG00000095139.94221.895104782.01960-0.179702.223901.45660HepG2PARN
ARCN1ENSG00000095139.94801.217105368.44950-0.161102.070901.53330HepG2PCBP1
ARCN1ENSG00000095139.93451.191304308.97050-0.320204.792903.84950HepG2PPIL4
ARCN1ENSG00000095139.93801.814205135.26460-0.433806.771205.62260HepG2PRPF4
ARCN1ENSG00000095139.94668.367005462.48940-0.226603.591702.98610HepG2PTBP1
ARCN1ENSG00000095139.94676.740805892.67390-0.333409.862808.88950HepG2PUM1
ARCN1ENSG00000095139.94243.749804708.53300-0.149901.935501.40100HepG2PUS1
ARCN1ENSG00000095139.92091.800404300.09640-1.039609.238808.00140HepG2RAVER1
ARCN1ENSG00000095139.94614.226606641.72400-0.5255013.1800012.21690HepG2RBM22
ARCN1ENSG00000095139.93968.674106079.31650-0.6153021.4216020.19590HepG2NELFE
ARCN1ENSG00000095139.94081.988805661.89340-0.4720013.3580012.15750HepG2RECQL
ARCN1ENSG00000095139.94287.532506237.24350-0.540808.356107.26900HepG2RPLP0
ARCN1ENSG00000095139.92459.920803210.02130-0.384004.550903.78360HepG2RPS19
ARCN1ENSG00000095139.93120.997704017.96290-0.364502.167501.45930HepG2RPS3A
ARCN1ENSG00000095139.94539.333406229.15220-0.456603.464102.70700HepG2SF3A3
ARCN1ENSG00000095139.95041.231106144.25310-0.285502.551801.87170HepG2SF3B1
ARCN1ENSG00000095139.93529.741805687.35140-0.6882026.4634024.95410HepG2SF3B4
ARCN1ENSG00000095139.93438.913905017.29310-0.5450023.7935022.21020HepG2SMN1
ARCN1ENSG00000095139.95650.293207501.59280-0.4089012.4529011.59280HepG2SRFBP1
ARCN1ENSG00000095139.96670.524405936.284000.168102.280901.84070HepG2SRSF1
ARCN1ENSG00000095139.95076.142906610.79450-0.381102.733601.73960HepG2SRSF3
ARCN1ENSG00000095139.93581.154705480.83400-0.6140020.8664019.36260HepG2SRSF5
ARCN1ENSG00000095139.95039.082405688.53390-0.174902.238701.60540HepG2SRSF7
ARCN1ENSG00000095139.94361.774204829.41470-0.146901.894401.42170HepG2SRSF9
ARCN1ENSG00000095139.94649.626006513.17600-0.4862014.9955013.99290HepG2SSB
ARCN1ENSG00000095139.93731.513305685.49760-0.607506.283904.45560HepG2SSRP1
ARCN1ENSG00000095139.92111.161903494.72500-0.727107.325505.46690HepG2STIP1
ARCN1ENSG00000095139.92285.549703876.84590-0.762309.689008.55160HepG2SUPV3L1
ARCN1ENSG00000095139.93545.796305335.54280-0.5895015.4135014.25090HepG2TAF15
ARCN1ENSG00000095139.94418.233606049.57490-0.453405.528504.55630HepG2TARDBP
ARCN1ENSG00000095139.92290.586304694.47030-1.0352034.8452033.43250HepG2TIAL1
ARCN1ENSG00000095139.93895.880704736.28020-0.281804.862204.15730HepG2TRIM56
ARCN1ENSG00000095139.97022.720005655.519500.312302.772302.14270HepG2U2AF1
ARCN1ENSG00000095139.9796.647502290.21570-1.5235036.0800033.55620HepG2UCHL5
ARCN1ENSG00000095139.94903.992305524.31350-0.171802.368301.71400HepG2UPF1
ARCN1ENSG00000095139.92484.022403550.17160-0.515203.433902.30940HepG2UPF2
ARCN1ENSG00000095139.94869.202505678.16250-0.221703.031001.93900HepG2UTP18
ARCN1ENSG00000095139.93235.337605333.49560-0.7212029.5825027.94010HepG2UTP3
ARCN1ENSG00000095139.92367.415503816.32770-0.688909.209707.90850HepG2XRN2
ARCN1ENSG00000095139.91658.872305068.05920-1.6112046.3903044.33470HepG2ZC3H8
ARCN1ENSG00000095139.94994.006606075.67620-0.282807.360306.57920HepG2ZNF622
ARCN1ENSG00000095139.96246.351007746.52670-0.310502.921201.65800K562ABCF1
ARCN1ENSG00000095139.98729.1220010251.34460-0.231903.464202.84210K562AGGF1
ARCN1ENSG00000095139.94125.760203393.159700.281902.262101.43720K562EFTUD2
ARCN1ENSG00000095139.93787.489504399.63300-0.216102.313401.58270K562EIF3G
ARCN1ENSG00000095139.97001.798209252.85320-0.402209.280407.59810K562EIF4G2
ARCN1ENSG00000095139.95080.288303889.644300.385205.443703.50040K562FUS
ARCN1ENSG00000095139.93703.396706111.77450-0.7227018.4666017.01080K562FXR1
ARCN1ENSG00000095139.93301.857604769.34700-0.530508.688307.68030K562HNRNPC
ARCN1ENSG00000095139.93355.351104258.97220-0.344003.740102.39480K562HNRNPF
ARCN1ENSG00000095139.95826.340804618.317600.335103.470401.87360K562LARP7
ARCN1ENSG00000095139.95054.556507019.54790-0.473807.037905.67310K562MAGOH
ARCN1ENSG00000095139.95553.343707005.50980-0.335104.041802.91010K562MATR3
ARCN1ENSG00000095139.95002.591703301.941700.599308.404807.09310K562PRPF8
ARCN1ENSG00000095139.95784.407106819.83090-0.237602.335801.71880K562PTBP1
ARCN1ENSG00000095139.99043.7097010521.03940-0.218303.384102.32070K562PUM2
ARCN1ENSG00000095139.95014.549006882.27130-0.456805.085503.54510K562NELFE
ARCN1ENSG00000095139.95056.697403363.210200.588306.474305.21380K562RPS19
ARCN1ENSG00000095139.95431.439206552.30140-0.270703.217502.29450K562SF3B4
ARCN1ENSG00000095139.95842.781104898.403500.254203.552402.21470K562SRSF7
ARCN1ENSG00000095139.96472.701905301.787900.287803.385301.69760K562SRSF9
ARCN1ENSG00000095139.92449.686704538.29430-0.8896032.4052028.63710K562SSB
ARCN1ENSG00000095139.910509.133008808.184400.254602.946801.39340K562SUCLG1
ARCN1ENSG00000095139.97446.897806147.353100.276604.944003.23660K562TROVE2
ARCN1ENSG00000095139.97937.512406107.754800.377903.016101.86280K562U2AF1
ARCN1ENSG00000095139.98647.731906308.567500.454907.972106.59740K562U2AF2
ARCN1ENSG00000095139.97728.189906793.999400.185802.901402.16600K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARCN1 is not available on ENCORE database.





5 RBPs can affect the splicing of ARCN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARCN1ENSG00000095139.9chr11+1184443341184444981184431381184432651184519601184522240.051000.004820.07203includedK562SF3B4
SEARCN1ENSG00000095139.9chr11+118468421118468626118464304118464413118471339118471708-0.078000.000030.00086excludedHepG2U2AF1
SEARCN1ENSG00000095139.9chr11+118468421118468626118464304118464413118471339118471708-0.073000.000140.00263excludedHepG2U2AF2
SEARCN1ENSG00000095139.9chr11+1184519601184522241184431671184432651184538931184540730.064000.000070.03801includedK562BUD13
MXEARCN1ENSG00000095139.9chr11+1184643041184644131184684211184686261184610551184612211184713391184736430.058000.000460.020661includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARCN1 is not avaliable on ENCORE database.