TOMM6

General Information

Gene Name       : TOMM6
Gene ID             : ENSG00000214736.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TOMM6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TOMM6ENSG00000214736.7593.27508.02550.64ENCSR000AEF
HepG2TOMM6ENSG00000214736.7348.43537.07442.75ENCSR985KAT
K562TOMM6ENSG00000214736.71261.981410.271336.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TOMM6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TOMM6 RNA is bound by 25 proteins.  







eCLIP assay for TOMM6 is not avaliable on ENCORE database.





25 proteins are bound to TOMM6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr64175704041757075+3'-UTR,CDS,intron-Proximal5.009516.10458K562RPS3
chr64175738341757493+3'-UTR4.347909.58311HepG2PCBP1
chr64175726641757324+3'-UTR,intron-Proximal3.461518.74912HepG2BUD13
chr64175753041757583+3'-UTR7.31306400.00000K562PUM2
chr64175743641757485+3'-UTR4.5522942.56759K562PCBP1
chr64175751341757559+3'-UTR4.6000120.86265HepG2LARP4
chr64175704841757073+3'-UTR,CDS4.037155.33915HepG2SUB1
chr64175755841757580+3'-UTR3.8994654.36401K562PABPC4
chr64175752541757530+3'-UTR7.78009400.00000K562PUM2
chr64175702941757070+3'-UTR,CDS3.5372512.95841HepG2LARP4
chr64175707241757083+3'-UTR,intron-Proximal4.616076.48405K562AQR
chr64175737541757397+3'-UTR4.3751519.66817K562IGF2BP1
chr64175740041757440+3'-UTR3.955808.63173HepG2PCBP2
chr64175751941757597+3'-UTR3.559997.91102HepG2LSM11
chr64175744541757491+3'-UTR3.4727916.10512HepG2LARP4
chr64175749441757513+3'-UTR3.900009.94881HepG2LARP4
chr64175758541757603+3'-UTR6.06839400.00000K562PABPC4
chr64175744041757506+3'-UTR3.6983620.48924HepG2PCBP2
chr64175730341757332+3'-UTR,intron-Proximal3.466008.48185K562PABPC4
chr64175746841757516+3'-UTR3.7119724.02958K562TIA1
chr64175733641757375+3'-UTR4.2762625.92493K562IGF2BP1
chr64175751041757601+3'-UTR3.479653.68605HepG2AKAP1
chr64175749441757512+3'-UTR5.88970400.00000K562PUM2
chr64175729241757375+3'-UTR,intron-Proximal3.6519814.84058HepG2LARP4
chr64175753341757558+3'-UTR3.0496117.33661K562PABPC4
chr64175730241757331+3'-UTR,intron-Proximal3.258676.74488K562APOBEC3C
chr64175704341757070+3'-UTR,CDS4.219036.74349HepG2DDX55
chr64175740941757436+3'-UTR5.9114623.30729K562PCBP1
chr64175729041757299+3'-UTR,intron-Proximal3.3611610.89350K562YBX3
chr64175751141757590+3'-UTR4.1894225.99827HepG2DDX55
chr64175758041757585+3'-UTR5.4327085.17316K562PABPC4
chr64175755941757601+3'-UTR4.1769015.85755HepG2LARP4
chr64175734941757371+3'-UTR3.0303311.11078K562YBX3
chr64175744941757468+3'-UTR3.3321217.65463K562TIA1
chr64175751841757598+3'-UTR3.7385315.72370K562APOBEC3C
chr64175697141757075+3'-UTR,CDS,intron-Proximal3.4192511.20457HepG2LSM11
chr64175730041757385+3'-UTR,intron-Proximal3.249274.65018HepG2PCBP2
chr64175733241757352+3'-UTR3.9098524.50737K562PABPC4
chr64175750641757584+3'-UTR3.6087811.57088K562PUM1
chr64175751441757604+3'-UTR3.045457.23917HepG2ZC3H11A
chr64175743641757511+3'-UTR3.4082910.04084HepG2DDX55
chr64175742441757436+3'-UTR3.804514.36276HepG2LARP4
chr64175751241757524+3'-UTR6.81941400.00000K562PUM2
chr64175735241757381+3'-UTR3.5299521.21870K562PABPC4
chr64175752541757575+3'-UTR3.1321018.93889K562GEMIN5
chr64175752141757601+3'-UTR3.899967.75227HepG2DDX6
chr64175727341757308+3'-UTR,intron-Proximal3.585045.46476K562AQR
chr64175750741757603+3'-UTR6.4635334.50790HepG2SUB1
chr64175542141755495+3'-UTR,5'-UTR,CDS3.4883157.35554K562DDX3X
chr64175542941755476+3'-UTR,5'-UTR,CDS3.1108617.24066K562YBX3
chr64175543141755481+3'-UTR,5'-UTR,CDS4.8080821.28743K562RPS3
chr64175549541755534+3'-UTR,CDS3.0950838.66611K562DDX3X
chr64175543541755481+3'-UTR,CDS4.019155.39661K562GEMIN5
chr64175698241757057+3'-UTR,CDS3.367163.77473HepG2PABPN1
chr64175703441757051+3'-UTR,CDS3.257587.42890K562PABPC4
chr64175700541757020+3'-UTR,CDS4.4253413.38715HepG2LARP4
chr64175548341755543+3'-UTR,CDS3.3091326.07660K562YBX3
chr64175703541757063+3'-UTR,CDS3.995383.39686HepG2G3BP1
chr64175698341757040+3'-UTR,CDS4.209785.17248K562RPS3
chr64175547941755569+3'-UTR,CDS,intron-Proximal4.480818.00438HepG2DDX55
chr64175548141755563+3'-UTR,CDS6.6454523.45859K562RPS3
chr64175698141757043+3'-UTR,CDS4.0318312.65480HepG2DDX55
chr64175699141757028+3'-UTR,CDS3.1120615.08503K562PABPC4
chr64175710241757193+intron-Distal,intron-Proximal4.876317.00634K562KHSRP
chr64175708341757143+intron-Proximal6.1506711.56697K562AQR
chr64175556341755604+intron-Proximal3.793266.04280HepG2PRPF8
chr64175556941755605+intron-Proximal4.973856.22530K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TOMM6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TOMM6 is not available on ENCORE database.

  • 118 RBPs can affect the levels of TOMM6.  








The Knockdown/knockout RNA-Seq assay for TOMM6 is not available on ENCORE database.





118 RBPs can affect the gene expression of TOMM6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TOMM6ENSG00000214736.33548.840202769.573200.357602.941102.13250HepG2ASCC1
TOMM6ENSG00000214736.31258.382101766.06250-0.489004.120303.04290HepG2BCLAF1
TOMM6ENSG00000214736.32572.270602043.309800.332002.967202.35020HepG2BOP1
TOMM6ENSG00000214736.31427.149301849.80190-0.374203.559902.79820HepG2DDX21
TOMM6ENSG00000214736.31170.861401455.34960-0.313802.714001.37220HepG2DDX52
TOMM6ENSG00000214736.31496.552902754.23590-0.8800011.5982010.43810HepG2DDX6
TOMM6ENSG00000214736.31492.031101826.36020-0.291704.489103.69390HepG2DNAJC2
TOMM6ENSG00000214736.31795.740202647.88480-0.560305.907905.05870HepG2EIF2S1
TOMM6ENSG00000214736.31222.292001746.46050-0.514806.386704.84710HepG2EIF3G
TOMM6ENSG00000214736.32124.987602849.01240-0.423002.588401.92150HepG2EIF4B
TOMM6ENSG00000214736.32447.682803076.92000-0.330105.621004.50020HepG2EIF4G1
TOMM6ENSG00000214736.31848.397203073.52350-0.7336023.4742022.01570HepG2ETF1
TOMM6ENSG00000214736.32210.544702952.27050-0.417403.690902.90060HepG2FXR1
TOMM6ENSG00000214736.32244.329702907.41040-0.373503.110002.16590HepG2G3BP2
TOMM6ENSG00000214736.32372.816403056.47620-0.365306.266705.24680HepG2HNRNPF
TOMM6ENSG00000214736.32343.145602841.11450-0.278005.152004.25540HepG2HNRNPL
TOMM6ENSG00000214736.32088.053401576.808600.405102.564801.38600HepG2HSPD1
TOMM6ENSG00000214736.32098.731003009.77030-0.520107.307206.18230HepG2IGF2BP1
TOMM6ENSG00000214736.32124.961502800.11310-0.398002.463001.52720HepG2KHSRP
TOMM6ENSG00000214736.31821.504802953.30010-0.697208.712207.56290HepG2MAGOH
TOMM6ENSG00000214736.31628.758502200.97440-0.434405.453204.35100HepG2MSI2
TOMM6ENSG00000214736.31485.834302069.66000-0.478102.799101.82660HepG2MTPAP
TOMM6ENSG00000214736.32206.359503039.86020-0.462304.067203.30420HepG2NCBP2
TOMM6ENSG00000214736.32435.328703092.69960-0.344804.628303.64200HepG2NOL12
TOMM6ENSG00000214736.31288.558401799.35300-0.481704.765603.79390HepG2NSUN2
TOMM6ENSG00000214736.3727.373301104.17040-0.602203.158502.20610HepG2PABPC1
TOMM6ENSG00000214736.31955.686002707.34590-0.469204.234203.35240HepG2PABPC4
TOMM6ENSG00000214736.32405.440202778.30790-0.207902.605802.01220HepG2PCBP1
TOMM6ENSG00000214736.31567.513201833.34860-0.226002.121601.46920HepG2PPIL4
TOMM6ENSG00000214736.31185.151101541.58630-0.379302.652501.86070HepG2PRPF8
TOMM6ENSG00000214736.32006.678002826.95680-0.4944010.9538010.00590HepG2PTBP1
TOMM6ENSG00000214736.32584.266403131.62030-0.277203.031002.32830HepG2PUM2
TOMM6ENSG00000214736.31914.185603061.82460-0.6777015.6342014.32460HepG2QKI
TOMM6ENSG00000214736.3314.856901834.81690-2.5429039.9394037.60820HepG2RAVER1
TOMM6ENSG00000214736.32897.741402568.907200.173701.775501.33660HepG2RBM22
TOMM6ENSG00000214736.31694.881602778.74190-0.7132013.5574012.13190HepG2RBM25
TOMM6ENSG00000214736.31993.046303146.19410-0.6586019.2827018.10590HepG2NELFE
TOMM6ENSG00000214736.31756.317302930.13870-0.7384023.7667022.27300HepG2RECQL
TOMM6ENSG00000214736.31325.697901802.64520-0.443402.380401.50180HepG2RPS10
TOMM6ENSG00000214736.31065.664001524.95200-0.517004.095003.15990HepG2RRP9
TOMM6ENSG00000214736.31708.859501376.372800.312102.221301.37590HepG2SERBP1
TOMM6ENSG00000214736.33842.678202573.391800.578302.882302.19400HepG2SF3A3
TOMM6ENSG00000214736.32157.556402943.36200-0.448109.610308.60780HepG2SF3B4
TOMM6ENSG00000214736.32198.049102830.66740-0.364908.092806.98850HepG2SLBP
TOMM6ENSG00000214736.31609.836402234.86650-0.473302.743401.96580HepG2SNRNP70
TOMM6ENSG00000214736.32652.275403072.17760-0.212003.002302.51470HepG2SRSF1
TOMM6ENSG00000214736.32107.282702914.86060-0.4680010.326309.22000HepG2SRSF5
TOMM6ENSG00000214736.32131.613503002.83900-0.4944011.000509.77230HepG2SRSF7
TOMM6ENSG00000214736.31773.822902499.33260-0.4947011.7604010.76360HepG2SRSF9
TOMM6ENSG00000214736.32217.946402519.22460-0.183802.017801.56220HepG2SSB
TOMM6ENSG00000214736.32129.948601571.259800.438803.379901.97360HepG2SSRP1
TOMM6ENSG00000214736.31174.052701714.72450-0.546503.343802.01470HepG2SUB1
TOMM6ENSG00000214736.32743.460203315.02900-0.273005.124204.32180HepG2SUCLG1
TOMM6ENSG00000214736.31575.770901977.99550-0.328002.685601.97040HepG2TARDBP
TOMM6ENSG00000214736.31577.677702537.36570-0.6855012.9629011.18480HepG2TIA1
TOMM6ENSG00000214736.32402.950402884.15470-0.263302.453101.63320HepG2TUFM
TOMM6ENSG00000214736.31875.006002326.64190-0.311402.652202.03640HepG2U2AF1
TOMM6ENSG00000214736.31280.656703052.80160-1.2533024.0806021.67990HepG2UBE2L3
TOMM6ENSG00000214736.33106.414402203.382400.4954012.2110011.08850HepG2UTP3
TOMM6ENSG00000214736.31017.242901804.55120-0.827007.428205.41490HepG2XRCC5
TOMM6ENSG00000214736.36480.006708166.05340-0.333603.249801.90900K562ABCF1
TOMM6ENSG00000214736.36497.095104110.696700.6603025.6004023.98680K562AGGF1
TOMM6ENSG00000214736.35840.445604517.058700.370604.203002.93490K562AKAP8
TOMM6ENSG00000214736.36946.005304277.372300.6994013.3431011.74910K562AKAP8L
TOMM6ENSG00000214736.35322.882507480.17480-0.490908.529406.27450K562APOBEC3C
TOMM6ENSG00000214736.36078.888004488.004500.437608.684906.93990K562ATP5C1
TOMM6ENSG00000214736.33337.405404662.75670-0.4825013.5055011.34290K562BCLAF1
TOMM6ENSG00000214736.33475.006504606.02690-0.406502.059601.31330K562BOP1
TOMM6ENSG00000214736.33359.088604897.58990-0.544009.746208.25810K562CPSF6
TOMM6ENSG00000214736.32681.346703537.39630-0.399706.821005.05170K562CSTF2
TOMM6ENSG00000214736.34034.018205198.04140-0.365807.123205.14940K562DDX21
TOMM6ENSG00000214736.35356.638607553.45920-0.4958014.0710012.71370K562DDX47
TOMM6ENSG00000214736.36486.280304602.721400.4948011.925809.85660K562DKC1
TOMM6ENSG00000214736.32876.202803641.68050-0.340402.285201.45500K562EFTUD2
TOMM6ENSG00000214736.34275.637505942.34480-0.4749010.991909.70340K562EIF2S2
TOMM6ENSG00000214736.32262.964803720.83760-0.717405.417803.97150K562EIF3A
TOMM6ENSG00000214736.32872.485803899.80720-0.441103.125602.02170K562EIF3D
TOMM6ENSG00000214736.32631.971703135.29010-0.252502.024301.31950K562EIF4A3
TOMM6ENSG00000214736.36597.021908477.30110-0.361806.967605.49410K562EIF4G2
TOMM6ENSG00000214736.34205.881206241.80820-0.569604.718902.54570K562ESF1
TOMM6ENSG00000214736.33902.979605417.02960-0.472905.969904.06780K562EXOSC5
TOMM6ENSG00000214736.37371.727805870.221100.328503.300502.37000K562FIP1L1
TOMM6ENSG00000214736.33230.978704983.06200-0.625109.396407.77150K562FMR1
TOMM6ENSG00000214736.32482.697404223.54260-0.7665011.352709.37500K562FTO
TOMM6ENSG00000214736.34355.124303260.568500.417506.665805.78470K562FXR1
TOMM6ENSG00000214736.32765.793803810.67250-0.462403.330302.54110K562G3BP2
TOMM6ENSG00000214736.32541.757203650.95930-0.522403.290301.71820K562GEMIN5
TOMM6ENSG00000214736.34431.412205549.31470-0.324505.004703.49350K562GLRX3
TOMM6ENSG00000214736.33868.683404676.04240-0.273402.453801.70380K562GPKOW
TOMM6ENSG00000214736.34006.875005171.42760-0.368104.720703.33010K562HNRNPA1
TOMM6ENSG00000214736.32803.262805223.35900-0.8979017.1732015.76650K562HNRNPC
TOMM6ENSG00000214736.38272.001104828.440100.7766011.470209.24540K562HNRNPM
TOMM6ENSG00000214736.34263.545105727.10090-0.425807.850006.35120K562HNRNPU
TOMM6ENSG00000214736.32857.836903693.23790-0.370003.154801.56350K562KHDRBS1
TOMM6ENSG00000214736.36436.433104539.340100.503707.602806.06740K562KIF1C
TOMM6ENSG00000214736.32715.682103992.62760-0.556004.743103.48070K562KRR1
TOMM6ENSG00000214736.37093.803805085.210400.480207.531305.88450K562MBNL1
TOMM6ENSG00000214736.33572.253004564.31840-0.353603.960602.90130K562METAP2
TOMM6ENSG00000214736.34378.464605834.33700-0.4141011.342509.82350K562MTPAP
TOMM6ENSG00000214736.36029.792703564.366000.758404.735803.48380K562NAA15
TOMM6ENSG00000214736.34330.501206482.71780-0.5821030.2339028.20790K562NSUN2
TOMM6ENSG00000214736.35586.350603078.478800.859603.924102.68980K562PABPN1
TOMM6ENSG00000214736.34515.187106890.43720-0.609807.673506.28840K562PCBP3
TOMM6ENSG00000214736.33677.603405285.17340-0.523209.204107.77640K562POLR2G
TOMM6ENSG00000214736.39157.326306664.005500.458405.645904.40250K562PPIG
TOMM6ENSG00000214736.34594.128703543.757300.374403.931703.03930K562PRPF8
TOMM6ENSG00000214736.35147.857704278.729900.266702.737402.07600K562PTBP1
TOMM6ENSG00000214736.311980.117609838.368000.284103.807602.53660K562PUM1
TOMM6ENSG00000214736.39239.749804241.937201.1230021.1649019.69240K562PUS1
TOMM6ENSG00000214736.31545.069703635.82730-1.2346014.1454010.99640K562RAVER1
TOMM6ENSG00000214736.36960.090204133.163900.7518023.5764021.77360K562RBM15
TOMM6ENSG00000214736.33405.293004316.97350-0.342202.976601.83920K562NELFE
TOMM6ENSG00000214736.32615.798403610.20220-0.464803.423802.51280K562RPS19
TOMM6ENSG00000214736.35791.229502814.667001.040805.470303.59930K562SF1
TOMM6ENSG00000214736.35264.117506396.42300-0.281103.435002.53160K562SF3A3
TOMM6ENSG00000214736.33123.629704446.90250-0.509605.032803.69790K562SF3B1
TOMM6ENSG00000214736.32797.972404028.80820-0.526006.483704.54150K562SLBP
TOMM6ENSG00000214736.35193.088003233.531100.683402.845001.59600K562SNRNP200
TOMM6ENSG00000214736.35186.804706553.24050-0.337409.588107.96030K562SRPK2
TOMM6ENSG00000214736.32819.778303458.27450-0.294502.987301.88330K562SRSF4
TOMM6ENSG00000214736.33699.469704638.96130-0.326505.287903.64690K562SRSF7
TOMM6ENSG00000214736.34878.579006015.77320-0.302303.662701.89910K562SRSF9
TOMM6ENSG00000214736.35081.834307044.34080-0.471104.842703.11310K562STAU1
TOMM6ENSG00000214736.33095.375205006.45400-0.693703.186101.42540K562STIP1
TOMM6ENSG00000214736.32227.908103431.99270-0.623405.262303.82140K562SUPV3L1
TOMM6ENSG00000214736.36422.920305301.203800.276803.299802.40410K562SYNCRIP
TOMM6ENSG00000214736.33162.928404094.89050-0.372604.741503.62560K562TIA1
TOMM6ENSG00000214736.33372.147404504.48330-0.417703.817202.71220K562TIAL1
TOMM6ENSG00000214736.32590.516303631.90650-0.487503.435002.29330K562UCHL5
TOMM6ENSG00000214736.34892.817406873.74370-0.4904015.8202014.26750K562UPF1
TOMM6ENSG00000214736.33782.358205881.67710-0.6369012.7077010.77610K562WDR3
TOMM6ENSG00000214736.35118.623406116.04390-0.256804.276503.24150K562WDR43
TOMM6ENSG00000214736.32786.374803697.60960-0.408203.098901.79640K562XRN2
TOMM6ENSG00000214736.35018.174907364.63890-0.553508.788807.12470K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TOMM6 is not available on ENCORE database.





1 RBPs can affect the splicing of TOMM6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETOMM6ENSG00000214736.3chr6+417568774175707041755399417555634175730541757634-0.763000.000160.00263excludedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TOMM6 is not avaliable on ENCORE database.