SYVN1

General Information

Gene Name       : SYVN1
Gene ID             : ENSG00000162298.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SYVN1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SYVN1ENSG00000162298.1833.2829.9531.62ENCSR000AEF
HepG2SYVN1ENSG00000162298.1844.5227.8536.19ENCSR985KAT
K562SYVN1ENSG00000162298.1827.8127.0027.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SYVN1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • SYVN1 RNA is bound by 33 proteins.  







eCLIP assay for SYVN1 is not avaliable on ENCORE database.





33 proteins are bound to SYVN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116489532464895395-3'-UTR,intron-Distal4.7257940.96928HepG2PCBP2
chr116489525164895292-3'-UTR,intron-Distal4.491284.09144K562FAM120A
chr116489531064895389-3'-UTR,intron-Distal5.7507041.53772HepG2AKAP1
chr116489511464895142-3'-UTR,intron-Distal4.7379024.93452HepG2UPF1
chr116489890264898947-3'-UTR,CDS,intron-Distal,intron-Proximal3.692764.58287K562PRPF8
chr116489507064895114-3'-UTR,intron-Distal4.5623222.44453HepG2UPF1
chr116489840364898488-3'-UTR,CDS,intron-Distal,intron-Proximal3.395837.06500K562UCHL5
chr116489901864899078-3'-UTR,CDS,intron-Distal,intron-Proximal4.0847111.25348K562BUD13
chr116489550664895562-3'-UTR,intron-Distal4.4089015.01187K562UPF1
chr116489482864894859-3'-UTR,intron-Distal4.0581410.85611K562UPF1
chr116489550864895568-3'-UTR,intron-Distal3.096974.48153HepG2HNRNPK
chr116489550964895573-3'-UTR,intron-Distal6.3110520.80551HepG2AKAP1
chr116489506164895118-3'-UTR,intron-Distal6.4133737.71429K562UPF1
chr116489490564894930-3'-UTR,intron-Distal5.2875310.01142HepG2UPF1
chr116489494064895013-3'-UTR,intron-Distal5.9069050.13772K562UPF1
chr116489511864895143-3'-UTR,intron-Distal4.9032623.19676K562UPF1
chr116489970664899811-3'-UTR,CDS,intron-Distal,intron-Proximal3.8912515.76354K562DDX24
chr116489524764895313-3'-UTR,intron-Distal5.9538543.55660K562UPF1
chr116489494464895007-3'-UTR,intron-Distal4.0402018.40509HepG2AKAP1
chr116489501364895061-3'-UTR,intron-Distal6.7165724.99307K562UPF1
chr116489493064895004-3'-UTR,intron-Distal6.0836337.28842HepG2UPF1
chr116489551064895572-3'-UTR,intron-Distal4.779155.88337HepG2PCBP1
chr116489573664895793-3'-UTR,intron-Distal4.9771616.34518HepG2UPF1
chr116489514664895208-3'-UTR,intron-Distal3.683525.19325HepG2LARP4
chr116489531364895387-3'-UTR,intron-Distal5.4684241.29257K562UPF1
chr116489529264895377-3'-UTR,intron-Distal3.2485711.16034K562FAM120A
chr116489847164898555-3'-UTR,CDS,intron-Distal,intron-Proximal3.071576.41523K562SF3B4
chr116489903264899135-3'-UTR,CDS,intron-Distal,intron-Proximal3.612413.94787K562AQR
chr116489480264894860-3'-UTR,intron-Distal5.295997.80881K562PUM2
chr116489507064895117-3'-UTR,intron-Distal4.3580413.52127HepG2AKAP1
chr116489493964895001-3'-UTR,intron-Distal3.832695.57868K562DDX6
chr116489507264895116-3'-UTR,intron-Distal3.544653.29045K562AKAP1
chr116489525264895294-3'-UTR,intron-Distal3.974973.74540HepG2IGF2BP1
chr116489526064895310-3'-UTR,intron-Distal5.3401919.60964HepG2AKAP1
chr116489514364895199-3'-UTR,intron-Distal5.0128024.94036K562UPF1
chr116489535664895383-3'-UTR,intron-Distal3.175985.88805HepG2STAU2
chr116489493964895006-3'-UTR,intron-Distal4.086924.88201K562ZC3H11A
chr116489532364895388-3'-UTR,intron-Distal3.278435.80500K562HNRNPK
chr116489511764895211-3'-UTR,intron-Distal5.4205733.20865HepG2AKAP1
chr116489874364898799-3'-UTR,CDS,intron-Distal,intron-Proximal3.232863.41665HepG2GRWD1
chr116489551464895557-3'-UTR,intron-Distal3.342903.72310K562HNRNPK
chr116489552764895594-3'-UTR,intron-Distal5.961239.05353K562PCBP1
chr116489475064894790-3'-UTR,intron-Distal,intron-Proximal,polyA_site6.0780912.65878K562PUM2
chr116489971864899794-3'-UTR,CDS,intron-Distal,intron-Proximal3.280848.97671HepG2PPIG
chr116489489464894939-3'-UTR,intron-Distal3.904664.17294K562DDX6
chr116489531564895387-3'-UTR,intron-Distal5.5395712.89920HepG2PCBP1
chr116489524264895318-3'-UTR,intron-Distal7.3908045.83748HepG2UPF1
chr116489506864895175-3'-UTR,intron-Distal3.951709.71754HepG2IGF2BP1
chr116489551164895566-3'-UTR,intron-Distal4.8901718.98456HepG2PCBP2
chr116489576564895825-3'-UTR,intron-Distal3.412383.93112K562RBM15
chr116489543164895503-3'-UTR,intron-Distal5.0707015.10113HepG2UPF1
chr116489487164894940-3'-UTR,intron-Distal4.7090824.36750K562UPF1
chr116489895164899010-3'-UTR,CDS,intron-Distal3.535265.58370HepG2PPIG
chr116489838664898505-3'-UTR,CDS,intron-Distal,intron-Proximal3.258108.29327HepG2PPIG
chr116489550364895587-3'-UTR,intron-Distal5.5603824.27438HepG2UPF1
chr116489967864899720-3'-UTR,CDS,intron-Distal,intron-Proximal3.831156.32052K562AQR
chr116489530564895381-3'-UTR,intron-Distal3.217165.15800HepG2ILF3
chr116489895464899054-3'-UTR,CDS,intron-Distal3.008867.15192K562SND1
chr116489562964895683-3'-UTR,intron-Distal4.151894.19401K562HNRNPK
chr116489890064898955-3'-UTR,CDS,intron-Distal,intron-Proximal4.455288.78209HepG2PRPF8
chr116489530964895368-3'-UTR,intron-Distal4.209185.60571HepG2FAM120A
chr116489557364895616-3'-UTR,intron-Distal4.6492111.61205HepG2AKAP1
chr116489543964895479-3'-UTR,intron-Distal5.3141010.52382HepG2AKAP1
chr116489846664898503-3'-UTR,CDS,intron-Distal4.556395.02285K562SND1
chr116489564464895683-3'-UTR,intron-Distal4.282004.53890K562PCBP1
chr116489525864895317-3'-UTR,intron-Distal5.218615.97844K562AKAP1
chr116489494264895002-3'-UTR,intron-Distal3.4635714.87916HepG2DDX55
chr116489531864895380-3'-UTR,intron-Distal6.1248838.47550HepG2UPF1
chr116489533564895380-3'-UTR,intron-Distal5.838326.46614K562PCBP1
chr116489563664895683-3'-UTR,intron-Distal4.8569813.78695HepG2UPF1
chr116489490064894999-3'-UTR,intron-Distal5.5450712.68988HepG2DDX6
chr116489550564895569-3'-UTR,intron-Distal3.024843.23915K562FAM120A
chr116489514264895198-3'-UTR,intron-Distal5.0463531.99699HepG2UPF1
chr116490192664901985-5'-UTR,intron-Distal,intron-Proximal3.852675.63105K562DDX3X
chr116490105664901092-5'-UTR,CDS,intron-Distal,intron-Proximal4.563408.81962K562DDX3X
chr116490194064901994-5'-UTR,intron-Distal,intron-Proximal3.571676.40214HepG2NCBP2
chr116490193664901966-5'-UTR,intron-Distal,intron-Proximal3.002969.13276HepG2DDX3X
chr116490192164901936-5'-UTR,intron-Distal,intron-Proximal4.1481315.93423HepG2DDX3X
chr116490105864901091-5'-UTR,CDS,intron-Distal,intron-Proximal4.0437220.86601HepG2DDX3X
chr116490193664901953-5'-UTR,intron-Distal,intron-Proximal4.073673.20743HepG2PPIG
chr116489732464897375-CDS,intron-Distal,intron-Proximal3.273116.27891HepG2PCBP2
chr116489737564897388-CDS,intron-Distal,intron-Proximal3.692775.74223HepG2PCBP2
chr116489747364897546-CDS,intron-Distal,intron-Proximal4.400148.71140HepG2PCBP1
chr116490024964900315-CDS,intron-Distal,intron-Proximal4.038508.55183K562SF3B4
chr116490024064900307-CDS,intron-Distal,intron-Proximal3.807977.39410K562BUD13
chr116489773864897806-CDS,intron-Distal,intron-Proximal4.102338.05173HepG2PCBP1
chr116490099264901056-CDS,intron-Distal,intron-Proximal4.2193224.92522HepG2DDX3X
chr116489817264898225-CDS,intron-Distal,intron-Proximal3.618479.13633HepG2SND1
chr116490013164900208-CDS,intron-Distal,intron-Proximal5.0023322.46178HepG2PRPF8
chr116489728364897385-CDS,intron-Distal,intron-Proximal3.4214817.59005HepG2SND1
chr116489614764896188-CDS,intron-Distal,intron-Proximal3.334386.85552HepG2SND1
chr116489772664897805-CDS,intron-Distal,intron-Proximal5.2238912.06932HepG2DDX59
chr116490024564900298-CDS,intron-Distal,intron-Proximal4.1398812.89733K562EFTUD2
chr116489747464897567-CDS,intron-Distal,intron-Proximal4.3690219.02288K562PCBP1
chr116490098864901056-CDS,intron-Distal,intron-Proximal3.703888.56326K562DDX3X
chr116489759664897634-CDS,intron-Distal,intron-Proximal3.385873.07497K562SND1
chr116489774264897804-CDS,intron-Distal,intron-Proximal3.830407.57637K562PCBP1
chr116489976364899856-CDS,intron-Distal,intron-Proximal3.5065114.28031K562AQR
chr116489747264897530-CDS,intron-Distal,intron-Proximal4.4098810.06226HepG2PCBP2
chr116490100864901069-CDS,intron-Distal,intron-Proximal4.271008.51824HepG2RPS3
chr116489772964897810-CDS,intron-Distal,intron-Proximal3.4513018.14819HepG2SND1
chr116489610564896185-CDS,intron-Distal,intron-Proximal3.911623.18462K562IGF2BP2
chr116489728464897375-CDS,intron-Distal,intron-Proximal3.120926.09932K562RBM15
chr116489732964897391-CDS,intron-Distal,intron-Proximal3.780405.65400HepG2PCBP1
chr116489823364898294-CDS,intron-Distal,intron-Proximal3.0329411.09831HepG2SND1
chr116489782964897851-CDS,intron-Distal,intron-Proximal3.421694.87005HepG2PCBP2
chr116489783164897849-CDS,intron-Distal,intron-Proximal3.905635.79199HepG2SND1
chr116490039264900430-CDS,intron-Distal,intron-Proximal3.485923.99124HepG2PPIG
chr116489720064897218-CDS,intron-Distal,intron-Proximal3.220215.69819HepG2SND1
chr116490039264900479-CDS,intron-Distal,intron-Proximal3.7757511.28118K562SND1
chr116489980264899900-CDS,intron-Distal,intron-Proximal4.333777.60779HepG2AQR
chr116489813164898146-CDS,intron-Distal,intron-Proximal4.444413.92947HepG2DDX59
chr116489599264896054-CDS,intron-Distal,intron-Proximal3.080586.06969HepG2PRPF8
chr116489715664897212-CDS,intron-Distal,intron-Proximal3.280039.25476HepG2PRPF8
chr116489730464897380-CDS,intron-Distal,intron-Proximal3.7116813.82705HepG2RPS3
chr116490090064900943-CDS,intron-Distal,intron-Proximal5.088367.02967HepG2PRPF8
chr116490012764900240-CDS,intron-Distal,intron-Proximal3.2672411.84218K562BUD13
chr116489615664896226-CDS,intron-Distal,intron-Proximal4.4537010.16714K562AQR
chr116489773364897788-CDS,intron-Distal,intron-Proximal3.090644.01833HepG2PCBP2
chr116490063064900638-CDS,intron-Distal,intron-Proximal3.109933.19472HepG2SND1
chr116489603564896093-CDS,intron-Distal,intron-Proximal3.049215.74131HepG2PPIG
chr116490020264900249-CDS,intron-Distal,intron-Proximal3.326236.36993K562SND1
chr116489720664897261-CDS,intron-Distal3.539943.07497K562SND1
chr116489772864897841-CDS,intron-Distal,intron-Proximal4.213696.54246K562SND1
chr116489734264897388-CDS,intron-Distal,intron-Proximal5.0137711.20161K562PCBP1
chr116490013264900254-CDS,intron-Distal,intron-Proximal3.138183.36034K562SRSF1
chr116489734664897435-CDS,intron-Distal,intron-Proximal4.121318.58430K562EFTUD2
chr116489825264898295-CDS,intron-Distal,intron-Proximal3.307965.83673K562SND1
chr116489747264897537-CDS,intron-Distal,intron-Proximal4.285334.83379HepG2HNRNPK
chr116489981164899884-CDS,intron-Distal,intron-Proximal3.430816.01914HepG2SF3A3
chr116489783364897847-CDS,intron-Distal,intron-Proximal3.931783.94601K562PCBP1
chr116489718064897202-CDS,intron-Distal,intron-Proximal4.492789.80019K562AQR
chr116488912564889169-intron-Distal,intron-Proximal4.239464.07325HepG2SF3B4
chr116489851664898563-intron-Distal,intron-Proximal5.211775.43043K562EFTUD2
chr116488911464889174-CDS,intron-Distal,intron-Proximal5.104996.16981K562XRN2
chr116490026764900317-intron-Distal,intron-Proximal5.2706412.37853HepG2EFTUD2
chr116490027464900317-intron-Distal,intron-Proximal4.637225.54524HepG2SF3B4
chr116490013264900192-intron-Distal,intron-Proximal4.0588911.64735HepG2EFTUD2
chr116488949464889580-5'-UTR,intron-Distal,intron-Proximal4.768976.37834K562BUD13
chr116490018264900203-intron-Distal,intron-Proximal4.7991412.86643K562AQR
chr116488910964889169-CDS,intron-Distal,intron-Proximal5.1621310.89051K562SF3B4
chr116488950664889572-5'-UTR,intron-Distal,intron-Proximal4.9920413.78100HepG2PRPF8
chr116489713964897193-intron-Distal,intron-Proximal4.004593.28989K562RBM15
chr116489984564899925-intron-Distal,intron-Proximal4.3021111.80597K562BUD13
chr116489912264899210-intron-Distal,intron-Proximal4.6020812.55930K562EFTUD2
chr116490011964900171-intron-Distal,intron-Proximal4.7529411.56048K562EFTUD2
chr116489767064897706-intron-Distal,intron-Proximal4.003718.16617HepG2PRPF8
chr116490004764900087-intron-Distal,intron-Proximal5.213068.80869K562EFTUD2
chr116490013764900186-intron-Distal,intron-Proximal5.400687.81477K562SF3B4
chr116489983064899882-intron-Distal,intron-Proximal3.921476.67591K562SF3B4
chr116489992564900012-intron-Distal,intron-Proximal4.9295914.65339K562BUD13
chr116489906764899113-intron-Distal,intron-Proximal5.400688.26501K562SF3B4
chr116489983664899926-intron-Distal,intron-Proximal4.7381112.28583HepG2EFTUD2
chr116490083264900899-intron-Distal,intron-Proximal4.926346.46853K562EFTUD2
chr116488955264889561-5'-UTR,intron-Distal,intron-Proximal4.8854110.60410K562AQR
chr116489713364897180-intron-Distal,intron-Proximal4.0975112.01630K562AQR
chr116488950764889552-5'-UTR,intron-Distal,intron-Proximal5.3659814.81877K562AQR
chr116489983164899886-intron-Distal,intron-Proximal3.355064.37544HepG2SF3B4
chr116489740664897470-intron-Distal,intron-Proximal5.053149.24251HepG2EFTUD2
chr116489968564899704-intron-Distal,intron-Proximal3.410254.25142K562BUD13
chr116489866964898710-intron-Distal,intron-Proximal4.604397.82456K562SF3B4
chr116489886264898901-intron-Distal,intron-Proximal4.028503.82050HepG2SF3B4
chr116489984264899900-intron-Distal,intron-Proximal3.994138.74054HepG2BUD13
chr116490012564900182-intron-Distal,intron-Proximal5.4337022.83458K562AQR
chr116488944564889581-5'-UTR,intron-Distal,intron-Proximal3.896243.16390K562SRSF1
chr116489713464897178-intron-Distal,intron-Proximal3.522396.63359K562BUD13
chr116488951564889567-5'-UTR,intron-Distal,intron-Proximal3.564385.25094K562PRPF8
chr116488911864889174-intron-Distal,intron-Proximal4.192767.08156K562PRPF8
chr116488911564889177-CDS,intron-Distal,intron-Proximal5.7793516.63278K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SYVN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SYVN1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of SYVN1.  








The Knockdown/knockout RNA-Seq assay for SYVN1 is not available on ENCORE database.





99 RBPs can affect the gene expression of SYVN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SYVN1ENSG00000162298.121382.749501729.55570-0.322904.739503.98330HepG2ACO1
SYVN1ENSG00000162298.121224.510402167.08420-0.823603.640303.04130HepG2AKAP1
SYVN1ENSG00000162298.121328.93240972.889200.449802.926402.00040HepG2BCLAF1
SYVN1ENSG00000162298.121886.440201368.896500.462604.777004.01750HepG2BOP1
SYVN1ENSG00000162298.122135.669601729.036800.304605.173104.31560HepG2CKAP4
SYVN1ENSG00000162298.122356.420501256.689400.9069015.7010014.22620HepG2CPSF6
SYVN1ENSG00000162298.121688.571801094.428100.6255011.725809.71470HepG2YBX3
SYVN1ENSG00000162298.12681.709501138.73070-0.740205.967503.73410HepG2CSTF2T
SYVN1ENSG00000162298.122245.660801714.865400.388908.077206.91110HepG2DAZAP1
SYVN1ENSG00000162298.12981.783401225.64240-0.320102.322101.69340HepG2DDX21
SYVN1ENSG00000162298.12914.839401200.19020-0.391703.533802.49210HepG2DDX24
SYVN1ENSG00000162298.122649.210001901.257800.478505.170403.82380HepG2DDX5
SYVN1ENSG00000162298.121796.261901074.671400.741007.011405.93260HepG2DNAJC21
SYVN1ENSG00000162298.121492.857301065.145400.486909.901508.75850HepG2DNAJC2
SYVN1ENSG00000162298.121015.955001381.36380-0.443303.685402.63250HepG2EEF2
SYVN1ENSG00000162298.122543.775101713.933800.569603.345402.69770HepG2EIF2S1
SYVN1ENSG00000162298.12932.082801157.95820-0.313102.452401.43470HepG2EIF3G
SYVN1ENSG00000162298.121687.913002236.21530-0.405803.301901.38580HepG2EIF3H
SYVN1ENSG00000162298.122326.649401620.637400.521604.480303.45910HepG2EIF4G2
SYVN1ENSG00000162298.121279.366201689.95800-0.401603.371202.44900HepG2EWSR1
SYVN1ENSG00000162298.121523.579102500.29140-0.714604.985103.98000HepG2FIP1L1
SYVN1ENSG00000162298.122005.952801424.467100.493804.176503.40170HepG2GPKOW
SYVN1ENSG00000162298.121862.031201575.997600.240502.542601.64150HepG2HNRNPA2B1
SYVN1ENSG00000162298.122101.092101502.392800.483807.285206.19150HepG2HNRNPF
SYVN1ENSG00000162298.121945.261401562.119200.316405.397404.48180HepG2HNRNPL
SYVN1ENSG00000162298.121922.200401359.403200.499704.817004.01000HepG2HNRNPLL
SYVN1ENSG00000162298.121374.333601724.57100-0.327502.590701.66940HepG2HNRNPM
SYVN1ENSG00000162298.122293.257301479.413700.632303.656702.83400HepG2IGF2BP1
SYVN1ENSG00000162298.12888.878401691.96990-0.928602.756601.77550HepG2IGF2BP3
SYVN1ENSG00000162298.121439.085301224.572300.232802.972902.21480HepG2ILF2
SYVN1ENSG00000162298.121209.135601923.09800-0.669502.758402.12840HepG2MATR3
SYVN1ENSG00000162298.121767.819401205.434900.552306.093905.01000HepG2NSUN2
SYVN1ENSG00000162298.122006.169901057.822300.923207.136405.66340HepG2PABPC1
SYVN1ENSG00000162298.121379.900801069.267100.367802.097301.44820HepG2PPIL4
SYVN1ENSG00000162298.12836.954301383.45020-0.725005.229703.59680HepG2PRPF6
SYVN1ENSG00000162298.121514.965001723.11760-0.185702.131401.59740HepG2PUM1
SYVN1ENSG00000162298.122253.750501721.864400.388304.783503.91300HepG2PUM2
SYVN1ENSG00000162298.121561.845302058.29560-0.398204.015403.28280HepG2QKI
SYVN1ENSG00000162298.12777.004001269.68000-0.708504.111303.26040HepG2RAVER1
SYVN1ENSG00000162298.121046.997901812.54070-0.7918018.4278017.32970HepG2RBM22
SYVN1ENSG00000162298.122340.896701868.145100.325403.399502.65840HepG2RBM25
SYVN1ENSG00000162298.121247.577502115.26630-0.7617012.1074011.12730HepG2NELFE
SYVN1ENSG00000162298.121424.758001970.28810-0.467704.403103.64900HepG2RECQL
SYVN1ENSG00000162298.121223.852601618.66060-0.403404.021703.22290HepG2RPLP0
SYVN1ENSG00000162298.12805.735201091.13680-0.437504.147803.41080HepG2RPS19
SYVN1ENSG00000162298.12852.429601154.72110-0.437903.691702.77120HepG2RPS2
SYVN1ENSG00000162298.12961.875401382.36010-0.523202.931901.36410HepG2RTF1
SYVN1ENSG00000162298.121932.712301067.622600.8561028.8387027.07020HepG2SAFB2
SYVN1ENSG00000162298.12705.917601104.02970-0.645203.915902.06810HepG2SBDS
SYVN1ENSG00000162298.121978.385901345.489700.556106.557005.50900HepG2SF3B1
SYVN1ENSG00000162298.121980.624801556.402900.347606.176005.19430HepG2SLBP
SYVN1ENSG00000162298.121016.135301245.04040-0.293103.829203.09250HepG2SMN1
SYVN1ENSG00000162298.121719.88600731.784301.232704.921903.04770HepG2SNRNP200
SYVN1ENSG00000162298.122057.788301497.111500.458802.521201.77710HepG2SNRNP70
SYVN1ENSG00000162298.121547.930402047.16690-0.403307.701406.98150HepG2SRFBP1
SYVN1ENSG00000162298.121064.626902065.44180-0.9561016.4442015.49700HepG2SRSF1
SYVN1ENSG00000162298.121885.974501476.101100.353404.672303.80340HepG2SRSF7
SYVN1ENSG00000162298.121557.209601822.70790-0.227102.735802.11710HepG2SUCLG1
SYVN1ENSG00000162298.122691.358801687.604500.6733010.866009.11670HepG2SUPT6H
SYVN1ENSG00000162298.121195.405801856.77590-0.635308.654207.75180HepG2TAF15
SYVN1ENSG00000162298.121644.422501325.231100.311202.284101.61590HepG2TARDBP
SYVN1ENSG00000162298.121240.725401705.83090-0.459305.407804.25080HepG2TIA1
SYVN1ENSG00000162298.12867.827801275.56430-0.555702.946001.43400HepG2TRA2A
SYVN1ENSG00000162298.122035.393001175.302500.7922023.8369022.38340HepG2TRIM56
SYVN1ENSG00000162298.122974.210602528.753700.234003.339102.58420HepG2UPF1
SYVN1ENSG00000162298.121486.790002441.40860-0.7155021.2628019.83400HepG2UTP3
SYVN1ENSG00000162298.121039.457701396.72030-0.426202.309401.34340HepG2XRCC6
SYVN1ENSG00000162298.125224.716104180.902600.321403.445602.32110K562AKAP8
SYVN1ENSG00000162298.123126.795401955.441400.6771010.563709.52800K562AQR
SYVN1ENSG00000162298.121552.029701251.200200.310702.130101.37100K562BOP1
SYVN1ENSG00000162298.121662.532801330.327900.321502.976602.16360K562CPSF6
SYVN1ENSG00000162298.122623.559303190.63450-0.282302.253201.37250K562CELF1
SYVN1ENSG00000162298.121972.210601438.126400.455507.005504.64640K562DDX6
SYVN1ENSG00000162298.124976.745004259.674100.224403.033702.11030K562DKC1
SYVN1ENSG00000162298.122007.37800944.542901.0875016.4974014.05170K562EFTUD2
SYVN1ENSG00000162298.121894.243201558.014200.281803.450702.08620K562EIF2S1
SYVN1ENSG00000162298.121987.651501447.782800.457107.329506.24070K562EIF2S2
SYVN1ENSG00000162298.121677.467701010.998600.730404.786203.38100K562EIF3D
SYVN1ENSG00000162298.122269.405701481.929500.614708.641207.19040K562EIF4A3
SYVN1ENSG00000162298.121744.233501334.540300.386204.867503.26920K562EIF4B
SYVN1ENSG00000162298.121593.866501293.561800.301102.908101.57970K562EWSR1
SYVN1ENSG00000162298.12905.752001180.55970-0.382302.638401.54230K562FKBP4
SYVN1ENSG00000162298.121115.892601541.14110-0.465806.926306.02990K562FXR1
SYVN1ENSG00000162298.12432.61850860.93610-0.992803.998603.10970K562G3BP2
SYVN1ENSG00000162298.122284.428601270.090300.8468015.6440013.71980K562GPKOW
SYVN1ENSG00000162298.121610.322601929.21750-0.260702.062901.40420K562GRSF1
SYVN1ENSG00000162298.121764.704101358.834700.377003.675102.99980K562HNRNPC
SYVN1ENSG00000162298.121806.176201130.709100.675603.626302.39030K562IGF2BP2
SYVN1ENSG00000162298.121603.508501149.716200.479903.786602.34790K562IGF2BP3
SYVN1ENSG00000162298.121931.878601316.572900.553106.771204.46060K562LARP7
SYVN1ENSG00000162298.121968.327701212.205300.6992010.858007.80650K562LSM11
SYVN1ENSG00000162298.125098.918704021.721500.342304.382202.93790K562MAK16
SYVN1ENSG00000162298.122072.483001338.272400.630906.778904.26100K562NUSAP1
SYVN1ENSG00000162298.123156.686301966.065700.683003.232102.13820K562PABPN1
SYVN1ENSG00000162298.121964.029001326.829500.565705.176603.14410K562PHF6
SYVN1ENSG00000162298.121232.19340919.157200.422703.070302.27970K562PRPF8
SYVN1ENSG00000162298.122347.298601218.404600.9459019.5262016.69710K562PSIP1
SYVN1ENSG00000162298.122485.324603011.33170-0.277002.392501.40620K562PUM1
SYVN1ENSG00000162298.122286.312201829.698400.321303.042601.35520K562RBM17
SYVN1ENSG00000162298.121735.427301111.958700.6421010.026608.13310K562RCC2
SYVN1ENSG00000162298.121379.98420936.032300.559903.890502.91970K562RPS19
SYVN1ENSG00000162298.123506.897001797.792800.963904.601502.92840K562SF1
SYVN1ENSG00000162298.121283.10270894.193900.520902.836101.97070K562SF3B4
SYVN1ENSG00000162298.124107.009402065.004200.991805.552003.60150K562SNRNP200
SYVN1ENSG00000162298.121788.981601054.073700.7631011.561409.08200K562SRFBP1
SYVN1ENSG00000162298.121584.675201131.133600.486303.616202.81550K562SRSF1
SYVN1ENSG00000162298.121943.481501542.746500.333003.077101.95280K562SRSF4
SYVN1ENSG00000162298.121610.396201068.523500.591702.973601.87800K562SRSF5
SYVN1ENSG00000162298.121189.54500889.526800.419202.678201.67820K562SUPV3L1
SYVN1ENSG00000162298.121890.570301144.560800.723902.551001.86990K562TARDBP
SYVN1ENSG00000162298.121621.507201104.116000.554304.228303.18490K562TIA1
SYVN1ENSG00000162298.121522.901601171.862300.377902.704401.78030K562TIAL1
SYVN1ENSG00000162298.121710.864301083.987600.658305.642603.95560K562TRA2A
SYVN1ENSG00000162298.122171.396601245.311900.8020013.4254010.98400K562TRIM56
SYVN1ENSG00000162298.123724.623402334.665600.6738022.9965021.16840K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SYVN1 is not available on ENCORE database.





36 RBPs can affect the splicing of SYVN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESYVN1ENSG00000162298.12chr11-648997186489982264898940648990676490020264900251-0.070000.001810.04951excludedK562AKAP8L
SESYVN1ENSG00000162298.12chr11-6489971864899822648989406489906764900202649002510.081000.002100.06907includedK562FXR1
SESYVN1ENSG00000162298.12chr11-649002026490025164898940648990676490039264900545-0.070000.000000.00001excludedK562PUS1
SESYVN1ENSG00000162298.12chr11-648986026489866464898390648985076489874464898844-0.082000.001940.05134excludedHepG2SF3A3
SESYVN1ENSG00000162298.12chr11-648997186489982264898940648990676490020264900251-0.108000.000070.00437excludedK562UTP18
SESYVN1ENSG00000162298.12chr11-648997186489982264898940648990676490020264900251-0.099000.000160.00647excludedK562AGGF1
A3SSSYVN1ENSG00000162298.12chr11-6490063064900805649006306490072364900940649010890.156000.001310.06323longerK562SF3B4
A3SSSYVN1ENSG00000162298.12chr11-6490094064901158649009406490108964901926649019580.090000.000090.00077longerK562AQR
A3SSSYVN1ENSG00000162298.12chr11-6490063064900841649006306490072364900940649011480.149000.000000.00000longerK562AQR
A3SSSYVN1ENSG00000162298.12chr11-6490016564900311649001656490025164900392649007910.055000.009730.05164longerK562AQR
A5SSSYVN1ENSG00000162298.12chr11-648997186490025164900202649002516489894064899067-0.238000.000480.02092shorterK562PUS1
A5SSSYVN1ENSG00000162298.12chr11-648997186490025164900202649002516489894064899067-0.224000.000700.06026shorterK562UTP18
RISYVN1ENSG00000162298.12chr11-648987446489906764898744648988446489894064899067-0.054000.000900.06314excludedK562NONO
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.072000.005870.07155includedK562SF3B4
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.208000.000000.00001includedK562SF3B4
RISYVN1ENSG00000162298.12chr11-648987446489906764898744648988446489894064899067-0.068000.000040.00524excludedK562PPIL4
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.082000.001550.07571includedHepG2TBRG4
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.083000.000120.00416includedHepG2PCBP2
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.174000.000000.00000includedK562PUS1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.296000.000000.00000includedK562PUS1
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764464897722648978510.132000.014080.07541includedK562PUS1
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.080000.000000.00000includedK562PUS1
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.115000.001620.02012includedHepG2SF3A3
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.112000.000000.00000includedHepG2SF3A3
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.051000.001390.03286includedK562HNRNPC
RISYVN1ENSG00000162298.12chr11-648997186490025164899718648998226490020264900251-0.198000.000000.00000excludedK562HNRNPC
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.172000.000260.00296includedHepG2U2AF2
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.056000.003630.07191includedHepG2UCHL5
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.141000.000300.01072includedHepG2UCHL5
RISYVN1ENSG00000162298.12chr11-648974736489785164897473648976476489772264897851-0.158000.000440.03198excludedK562NPM1
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.066000.000260.00485includedHepG2PRPF8
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.218000.000000.00000includedHepG2PRPF8
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.098000.001070.01586includedHepG2PRPF8
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.191000.000050.00090includedK562AGGF1
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.068000.000000.00000includedK562AGGF1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.156000.000010.00020includedK562AGGF1
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.508000.000030.00082includedK562PRPF8
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.079000.000080.00170includedK562PRPF8
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.161000.000000.00015includedK562PRPF8
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.150000.000260.00481includedK562PRPF8
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764464897722648978510.183000.006080.06425includedHepG2PCBP1
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.062000.000090.00221includedHepG2PCBP1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.054000.000940.01281includedHepG2QKI
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.162000.000500.03158includedHepG2HNRNPA1
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.068000.000070.00754includedHepG2HNRNPA1
RISYVN1ENSG00000162298.12chr11-648997186490025164899718648998226490020264900251-0.153000.000220.02645excludedK562AARS
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.070000.003690.06590includedK562RBM22
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.117000.000520.03072includedK562BUD13
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.167000.000300.00391includedK562AKAP8L
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.198000.000000.00000includedK562AKAP8L
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.058000.000000.00000includedK562AKAP8L
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.125000.000460.03458includedK562WDR3
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.205000.000000.00001includedHepG2U2AF1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.175000.000000.00000includedHepG2U2AF1
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.059000.000100.00152includedHepG2U2AF1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.105000.007410.06663includedK562RBM15
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.197000.000000.00010includedK562RBM15
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.122000.002410.04230includedK562U2AF1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.201000.000010.00027includedK562U2AF2
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.138000.000030.00118includedHepG2TIAL1
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.085000.000000.00008includedHepG2TIAL1
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.256000.000010.00237includedK562SBDS
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.082000.000000.00000includedHepG2NCBP2
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.091000.000000.00003includedHepG2SF3B4
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.228000.000010.00045includedHepG2FUBP3
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.094000.000070.00129includedHepG2RBM22
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.095000.000010.00021includedHepG2RBM22
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.137000.008850.09959includedHepG2SRSF9
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.067000.000000.00001includedHepG2HNRNPK
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.132000.003540.06485includedHepG2PTBP1
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764764897722648978510.150000.000460.00748includedK562UTP18
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.164000.006140.06070includedK562UTP18
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.165000.000000.00006includedK562EFTUD2
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764464897722648978510.279000.006440.05682includedK562EFTUD2
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.131000.000010.00029includedK562EFTUD2
RISYVN1ENSG00000162298.12chr11-6490039264900791649003926490054564900630649007910.134000.000000.00000includedK562AQR
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.183000.000000.00001includedK562AQR
RISYVN1ENSG00000162298.12chr11-6489747364897851648974736489764464897722648978510.184000.004960.02855includedK562AQR
RISYVN1ENSG00000162298.12chr11-6489874464899067648987446489884464898940648990670.182000.000000.00000includedK562AQR
RISYVN1ENSG00000162298.12chr11-6489971864900251648997186489982264900202649002510.142000.000030.00601includedK562LARP4
RISYVN1ENSG00000162298.12chr11-648974736489785164897473648976476489772264897851-0.155000.000390.03415excludedK562LARP4
RISYVN1ENSG00000162298.12chr11-648997186490025164899718648998226490020264900251-0.071000.000430.01120excludedK562PTBP1
RISYVN1ENSG00000162298.12chr11-649003926490079164900392649005456490063064900791-0.057000.007340.08900excludedK562FXR1
MXESYVN1ENSG00000162298.12chr11-64899718648998226490020264900251648989406489906764900392649005450.450000.000050.000651includedHepG2U2AF2
MXESYVN1ENSG00000162298.12chr11-64899718648998226490020264900251648989406489906764900392649005450.121000.000650.033801includedK562SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SYVN1 is not avaliable on ENCORE database.