SSBP4

General Information

Gene Name       : SSBP4
Gene ID             : ENSG00000130511.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SSBP4)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SSBP4ENSG00000130511.154.4815.309.89ENCSR000AEF
HepG2SSBP4ENSG00000130511.1546.9611.1929.07ENCSR985KAT
K562SSBP4ENSG00000130511.1582.3426.2054.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SSBP4 is not avaliable on ENCORE database.



Proteins bound to RNA

  • SSBP4 RNA is bound by 44 proteins.  







eCLIP assay for SSBP4 is not avaliable on ENCORE database.





44 proteins are bound to SSBP4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191854260518542671+3'-UTR,CDS,intron-Distal,intron-Proximal4.697046.97460K562PCBP1
chr191854173418541782+3'-UTR,CDS,intron-Proximal4.376004.27476HepG2AQR
chr191853685818536896+3'-UTR,intron-Distal,intron-Proximal3.760606.36044HepG2CSTF2T
chr191854260618542666+3'-UTR,CDS,intron-Distal,intron-Proximal3.069564.54883HepG2PABPN1
chr191854503218545071+3'-UTR,CDS5.012275.85773HepG2PABPN1
chr191853857418538600+3'-UTR,CDS,intron-Distal4.914509.25096K562DDX24
chr191854173718541774+3'-UTR,CDS,intron-Proximal4.285538.23899K562PRPF8
chr191854504018545122+3'-UTR,CDS3.529145.85150K562LSM11
chr191854247318542515+3'-UTR,CDS4.2965415.25586K562DDX24
chr191854260218542672+3'-UTR,CDS,intron-Distal,intron-Proximal4.9920914.05902K562DDX24
chr191854521318545282+3'-UTR5.2216720.64401K562PABPC4
chr191853870718538722+3'-UTR,CDS,intron-Proximal3.210564.16939HepG2PPIG
chr191854245918542515+3'-UTR,CDS3.879948.71373HepG2PABPN1
chr191854522018545288+3'-UTR5.732488.08716K562DDX55
chr191854171818541778+3'-UTR,CDS,intron-Proximal4.4770515.84669HepG2PRPF8
chr191854167618541725+3'-UTR,CDS4.4851712.73172K562DDX24
chr191854508518545114+3'-UTR,CDS4.440737.95258K562DDX24
chr191854262418542672+3'-UTR,CDS,intron-Distal3.215308.75706HepG2PPIG
chr191853856018538623+3'-UTR,CDS,intron-Distal,intron-Proximal4.023909.47710HepG2PPIG
chr191853685918536902+3'-UTR,intron-Distal,intron-Proximal4.568606.09301K562CSTF2T
chr191854165018541676+3'-UTR,CDS,intron-Proximal3.877163.86355HepG2PPIG
chr191854245918542511+3'-UTR,CDS3.800248.81096HepG2PPIG
chr191854281018542853+3'-UTR,CDS4.4560710.14097HepG2PPIG
chr191853685418536907+3'-UTR,intron-Distal,intron-Proximal3.626495.79638K562EWSR1
chr191853031118530388+5'-UTR,intron-Distal3.138993.97871K562METAP2
chr191853032218530390+5'-UTR,intron-Distal3.802308.97221HepG2PABPN1
chr191853038518530484+5'-UTR,CDS,intron-Distal,intron-Proximal4.972708.40868HepG2SDAD1
chr191853022418530333+5'-UTR,intron-Distal6.2281811.24411HepG2SDAD1
chr191854407318544103+5'-UTR,intron-Proximal5.464547.63570K562AQR
chr191853028518530383+5'-UTR,intron-Distal4.104709.40730K562GEMIN5
chr191853021118530322+5'-UTR,intron-Distal3.6426713.61470HepG2PABPN1
chr191853041918530514+5'-UTR,CDS,intron-Distal,intron-Proximal3.721154.46401K562DDX3X
chr191853089318530947+5'-UTR,intron-Distal,intron-Proximal3.664786.99195K562NONO
chr191853024418530311+5'-UTR,intron-Distal4.427208.30191HepG2DDX3X
chr191853027818530297+5'-UTR,intron-Distal3.784877.10944HepG2PPIG
chr191853089818530952+5'-UTR,intron-Distal,intron-Proximal4.4822111.38038HepG2CSTF2T
chr191853027518530315+5'-UTR,intron-Distal4.235735.01214HepG2BUD13
chr191853037318530397+5'-UTR,intron-Distal3.636635.32871HepG2CSTF2T
chr191853032018530398+5'-UTR,intron-Distal5.064049.60311HepG2DDX3X
chr191853040818530462+5'-UTR,CDS,intron-Distal,intron-Proximal3.775794.61051HepG2DDX3X
chr191854428418544335+5'-UTR,intron-Distal,intron-Proximal4.039333.71567HepG2RBFOX2
chr191853091918531063+5'-UTR,intron-Distal,intron-Proximal3.681157.47109HepG2FAM120A
chr191854430918544348+5'-UTR,CDS,intron-Proximal4.385989.49243HepG2EFTUD2
chr191853039018530468+5'-UTR,CDS,intron-Distal,intron-Proximal3.963268.71373HepG2PABPN1
chr191853043218530465+5'-UTR,CDS,intron-Distal,intron-Proximal4.440737.95258K562DDX24
chr191853044518530522+5'-UTR,CDS,intron-Distal,intron-Proximal4.313246.15069K562DHX30
chr191852975318529816+5'-UTR4.518993.57893K562EWSR1
chr191854402218544079+CDS,intron-Proximal5.0674815.81093HepG2PRPF8
chr191854436618544394+CDS,intron-Proximal4.096166.20582HepG2PRPF8
chr191854378218543843+CDS,intron-Proximal5.8374513.38683K562DDX24
chr191854378218543808+CDS,intron-Proximal3.108733.08662K562YBX3
chr191854448518544537+CDS,intron-Proximal4.0150111.26363K562PRPF8
chr191854363918543675+CDS3.509897.09278HepG2PPIG
chr191854439318544406+CDS,intron-Proximal4.4080611.01413HepG2PPIG
chr191854463618544670+CDS,intron-Proximal4.009746.65114HepG2PRPF8
chr191854363818543693+CDS,intron-Proximal6.3038923.64274K562DDX24
chr191854373018543784+CDS,intron-Proximal5.396878.42776K562SF3B4
chr191854351018543545+CDS4.7407512.34598K562DDX24
chr191854285318542875+CDS3.627126.00907HepG2PPIG
chr191854498618545029+CDS,intron-Proximal3.3451819.04428K562PRPF8
chr191854334818543388+CDS,intron-Proximal4.144476.79537K562AQR
chr191854382618543842+CDS3.038723.47879HepG2PPIG
chr191854451918544545+CDS,intron-Proximal4.322818.69525HepG2PPIG
chr191854353118543543+CDS4.402354.78834HepG2PABPN1
chr191854297118543015+CDS5.4002112.79146K562DDX24
chr191854302318543028+CDS,intron-Proximal6.1470426.27364K562AQR
chr191854373618543797+CDS,intron-Proximal5.0698810.59102K562EFTUD2
chr191854440118544417+CDS4.433054.78834HepG2PABPN1
chr191854363818543683+CDS,intron-Proximal3.583714.73347HepG2SUB1
chr191854337518543406+CDS5.3929611.60475K562DDX24
chr191854440618544423+CDS4.1806910.70743HepG2PPIG
chr191854439118544424+CDS,intron-Proximal3.039203.24220HepG2SRSF1
chr191854447718544541+CDS,intron-Proximal3.4692810.89299HepG2PRPF8
chr191854458218544628+CDS,intron-Proximal5.061226.66265HepG2PABPN1
chr191854448818544543+CDS,intron-Proximal6.4342714.81270HepG2EFTUD2
chr191854353818543545+CDS4.859955.27053HepG2PPIG
chr191854363918543671+CDS4.798966.39410HepG2PABPN1
chr191854352818543538+CDS3.781184.41267HepG2PPIG
chr191854498618545049+CDS,intron-Proximal4.4630925.51176HepG2DDX59
chr191854469418544742+CDS,intron-Distal,intron-Proximal4.606606.80961HepG2EFTUD2
chr191854470018544801+CDS,intron-Distal,intron-Proximal3.876279.83242K562PCBP1
chr191854380818543852+CDS3.802496.42513K562YBX3
chr191854302318543068+CDS,intron-Proximal4.991486.79646HepG2PRPF8
chr191854400018544024+CDS,intron-Proximal4.019488.69525HepG2PPIG
chr191854366618543694+CDS,intron-Proximal3.630114.09885HepG2BCLAF1
chr191854351618543538+CDS3.321565.05663HepG2PRPF8
chr191854448518544529+CDS,intron-Proximal3.9173211.23650K562DDX24
chr191854394318544017+CDS,intron-Proximal4.061228.71373HepG2PABPN1
chr191854296518543020+CDS3.356496.48254HepG2PABPN1
chr191854379318543852+CDS3.170024.31223HepG2PABPN1
chr191853245618532505+intron-Distal3.939884.37227K562FUS
chr191853101418531066+intron-Distal,intron-Proximal4.6290810.59961HepG2CSTF2T
chr191854134618541400+intron-Distal4.806086.58779K562EWSR1
chr191853072218530811+intron-Distal5.1911418.34450K562EWSR1
chr191853886218538954+intron-Distal,intron-Proximal4.873198.13169HepG2PRPF4
chr191853125618531309+intron-Distal5.145967.35452K562NONO
chr191853569318535790+intron-Distal4.2315712.59491K562CSTF2T
chr191853102418531059+intron-Distal,intron-Proximal4.214713.76710K562NONO
chr191854481618544912+intron-Distal,intron-Proximal3.014756.75611K562DROSHA
chr191853327418533316+intron-Distal4.154874.04290K562CSTF2T
chr191853231918532344+intron-Distal3.279334.21158HepG2CSTF2T
chr191853328018533333+intron-Distal4.311478.41227K562EWSR1
chr191853929818539341+intron-Distal4.447983.57893K562EWSR1
chr191854491218544944+intron-Distal,intron-Proximal3.6546212.71627K562DROSHA
chr191853388018533966+intron-Distal4.7649112.31402K562EWSR1
chr191853108818531133+intron-Distal4.602615.54520K562GTF2F1
chr191853698818537035+intron-Distal,intron-Proximal4.042108.06348HepG2CSTF2T
chr191853073018530769+intron-Distal3.760734.00200K562EIF4G2
chr191853884818538940+intron-Distal,intron-Proximal3.745253.79474HepG2FAM120A
chr191853389618533948+intron-Distal5.192929.60672HepG2CSTF2T
chr191854486218545021+intron-Distal,intron-Proximal6.9272963.14990HepG2PCBP2
chr191853118818531317+intron-Distal3.623029.80522K562FUS
chr191853424818534301+intron-Distal4.171433.19474K562LSM11
chr191853704818537086+intron-Distal3.581354.61345HepG2FAM120A
chr191853373818533771+intron-Distal3.378994.21158HepG2CSTF2T
chr191853424918534327+intron-Distal3.603256.15346K562FUS
chr191853116618531206+intron-Distal4.307923.76710K562NONO
chr191853389818534002+intron-Distal3.685228.11002K562NONO
chr191853620718536301+intron-Distal3.7361411.50111HepG2CSTF2T
chr191853745918537527+intron-Distal3.123645.38180HepG2FAM120A
chr191853322818533254+intron-Distal3.666955.40390K562EWSR1
chr191853057918530645+intron-Distal,intron-Proximal4.5934111.88189HepG2CSTF2T
chr191853171518531832+intron-Distal4.612335.31704K562FUS
chr191853211118532182+intron-Distal4.148153.28462K562TAF15
chr191853542018535476+intron-Distal4.307629.78791K562GTF2F1
chr191854479418544860+intron-Distal,intron-Proximal6.5336538.36659HepG2DDX59
chr191853773318537844+intron-Distal4.8598313.34548HepG2CSTF2T
chr191854480618544877+intron-Distal,intron-Proximal4.0963012.36003K562PCBP1
chr191853304918533125+intron-Distal4.281895.51985K562FUS
chr191853773118537789+intron-Distal3.514944.05280K562CSTF2T
chr191854047818540517+intron-Distal4.190894.10339HepG2CSTF2T
chr191853106218531132+intron-Distal4.882157.68230K562CSTF2T
chr191853326318533315+intron-Distal4.507195.19780K562NONO
chr191853644918536529+intron-Distal4.9143414.17100K562EWSR1
chr191853551218535597+intron-Distal3.913163.29554HepG2GTF2F1
chr191853425118534320+intron-Distal3.748523.06032K562HNRNPUL1
chr191853645518536508+intron-Distal4.813747.00800K562CSTF2T
chr191853390318533981+intron-Distal3.283733.71694HepG2NKRF
chr191853426818534339+intron-Distal4.722693.67527K562SMNDC1
chr191853556218535608+intron-Distal3.895095.61307K562GTF2F1
chr191853263818532650+intron-Distal3.040313.27222HepG2CSTF2T
chr191853372518533780+intron-Distal3.589724.25264K562NONO
chr191853074318530805+intron-Distal5.055167.32644K562SLTM
chr191853698118537038+intron-Distal,intron-Proximal3.093813.06925K562FUS
chr191853703418537094+intron-Distal4.567283.11728K562FAM120A
chr191853645518536531+intron-Distal5.763579.73136K562GTF2F1
chr191853425718534318+intron-Distal3.857824.40109K562AKAP8L
chr191853888618538943+intron-Distal,intron-Proximal3.179993.07461K562DROSHA
chr191854222818542235+intron-Distal,intron-Proximal5.395797.23718K562AQR
chr191853704218537083+intron-Distal4.169334.89018K562EFTUD2
chr191853073518530795+intron-Distal4.1094111.65011HepG2CSTF2T
chr191853646718536511+intron-Distal3.070393.42564K562DDX52
chr191853126818531348+intron-Distal5.097227.93492K562GTF2F1
chr191853070418530801+intron-Distal4.272768.45389K562CSTF2T
chr191853210718532159+intron-Distal4.554056.08649K562CSTF2T
chr191853424318534327+intron-Distal4.1683816.38559HepG2CSTF2T
chr191853886718538975+intron-Distal,intron-Proximal4.554919.51301K562GTF2F1
chr191853455718534605+intron-Distal3.601333.15856K562FUS
chr191853072818530808+intron-Distal3.825546.05701HepG2FAM120A
chr191853798118538019+intron-Distal3.785723.06347K562NONO
chr191853215218532211+intron-Distal3.051683.95966K562FUS
chr191854019118540224+intron-Distal3.760703.30664K562NONO
chr191853126418531302+intron-Distal3.824465.50026K562DDX52
chr191853705818537107+intron-Distal3.244423.01707K562SLTM
chr191853230018532353+intron-Distal3.689056.64311K562EWSR1
chr191854134418541390+intron-Distal3.317783.84725K562NONO
chr191853475218534819+intron-Distal3.345568.75909HepG2CSTF2T
chr191853569318535748+intron-Distal4.080544.16295K562FUS
chr191853170918531754+intron-Distal4.069963.57432K562NONO
chr191853888818538955+intron-Distal,intron-Proximal3.723706.09306K562NONO
chr191853070518530788+intron-Distal3.356934.52939HepG2PRPF4
chr191853389518534010+intron-Distal3.762249.67373K562CSTF2T
chr191853590618535965+intron-Distal3.803446.32706HepG2FAM120A
chr191853542418535456+intron-Distal4.482215.93727HepG2CSTF2T
chr191854488518544977+intron-Distal,intron-Proximal5.0942520.45935K562PCBP1
chr191853746018537517+intron-Distal5.090226.58779K562EWSR1
chr191853127218531351+intron-Distal3.583673.74485K562DROSHA
chr191853549018535536+intron-Distal3.461544.76898K562CSTF2T
chr191853556918535614+intron-Distal4.455644.72743K562NONO
chr191853569418535754+intron-Distal4.351667.50476K562EWSR1
chr191854223518542270+intron-Distal,intron-Proximal5.560868.03507K562AQR
chr191853417918534210+intron-Distal3.378994.14880HepG2CSTF2T
chr191853699418537064+intron-Distal4.022596.49145K562AKAP8L
chr191853885818538958+intron-Distal,intron-Proximal4.939615.89229K562EFTUD2
chr191853321618533297+intron-Distal3.878373.45219HepG2RBFOX2
chr191853201618532058+intron-Distal5.088038.50627K562EWSR1
chr191853644618536515+intron-Distal3.856737.41671HepG2FAM120A
chr191853604318536111+intron-Distal3.705088.74164HepG2CSTF2T
chr191853391318534028+intron-Distal4.814018.93384K562FUS
chr191853122918531370+intron-Distal3.354518.87264K562CSTF2T
chr191853109318531140+intron-Distal3.791336.34658K562NONO
chr191853747218537517+intron-Distal3.294863.62708K562CSTF2T
chr191853699418537105+intron-Distal6.2200419.91594K562EWSR1
chr191853126918531338+intron-Distal4.1625710.39419K562EWSR1
chr191853124718531313+intron-Distal3.334478.28562HepG2CSTF2T
chr191853746118537526+intron-Distal4.6796313.53287HepG2CSTF2T
chr191853076318530800+intron-Distal4.349225.08521K562GEMIN5
chr191853887818538945+intron-Distal,intron-Proximal3.942635.82242K562EWSR1
chr191853106618531139+intron-Distal3.9551715.52091HepG2CSTF2T
chr191853799018538023+intron-Distal4.637515.55667K562EWSR1
chr191854491318544968+intron-Distal,intron-Proximal3.806583.38341HepG2RBM5
chr191853124518531314+intron-Distal3.944663.03048HepG2GTF2F1
chr191853420918534325+intron-Distal3.9643814.61035K562CSTF2T
chr191853645118536516+intron-Distal3.221454.70418K562AKAP8L
chr191853512218535155+intron-Distal4.241254.48935K562CSTF2T
chr191854026918540321+intron-Distal3.290553.46580HepG2CSTF2T
chr191853774518537808+intron-Distal3.215444.61081K562GTF2F1
chr191853056518530635+intron-Distal,intron-Proximal3.434965.52022HepG2FAM120A
chr191853520418535276+intron-Distal4.329447.72301HepG2CSTF2T
chr191853704518537097+intron-Distal4.000707.13178K562CSTF2T
chr191853575318535794+intron-Distal3.852344.12529K562GTF2F1
chr191853704218537106+intron-Distal5.5096111.61783HepG2CSTF2T
chr191854487018545003+intron-Distal,intron-Proximal5.4582443.70763HepG2HNRNPK
chr191853667118536715+intron-Distal,intron-Proximal3.139964.51156HepG2CSTF2T
chr191853349118533535+intron-Distal3.373606.28777HepG2CSTF2T
chr191854487118545015+intron-Distal,intron-Proximal3.422054.51399HepG2ILF3
chr191853569818535750+intron-Distal4.768216.34807K562RBFOX2
chr191853071418530804+intron-Distal4.526534.38082K562SMNDC1
chr191854006818540100+intron-Distal3.013943.14365K562NONO
chr191853262218532663+intron-Distal4.158353.80314K562CSTF2T
chr191853130918531347+intron-Distal3.850365.37486K562NONO
chr191854136618541447+intron-Distal3.471443.73688K562SMNDC1
chr191854101918541071+intron-Distal4.327044.92128HepG2CSTF2T
chr191853425618534342+intron-Distal3.663615.33418K562FAM120A
chr191853307318533121+intron-Distal4.283894.07596K562GTF2F1
chr191853416018534247+intron-Distal3.571556.02427K562FUS
chr191854474818544796+intron-Distal,intron-Proximal3.734556.34873HepG2HNRNPK
chr191853053018530579+intron-Distal,intron-Proximal5.2092410.10424HepG2CSTF2T
chr191853978218539845+intron-Distal4.569765.93727HepG2CSTF2T
chr191853424118534312+intron-Distal3.542498.81878K562NONO
chr191853698818537036+intron-Distal,intron-Proximal3.867264.06602HepG2FAM120A
chr191853072318530805+intron-Distal4.370687.24988K562NONO
chr191853095218531014+intron-Distal,intron-Proximal4.8227013.85918HepG2CSTF2T
chr191853547618535530+intron-Distal5.667259.73136K562GTF2F1
chr191853069018530810+intron-Distal3.311745.63456HepG2RBFOX2
chr191853349418533527+intron-Distal3.715155.10737K562EWSR1
chr191853543618535522+intron-Distal4.408805.02240HepG2PRPF4
chr191853625418536271+intron-Distal4.204254.22598K562CSTF2T
chr191853521418535263+intron-Distal4.224574.22598K562CSTF2T
chr191853553218535597+intron-Distal4.273923.28462K562TAF15
chr191853983318539873+intron-Distal3.355033.58549K562NONO
chr191853556118535603+intron-Distal3.503076.64311K562EWSR1
chr191854491318544942+intron-Distal,intron-Proximal7.0394822.99004HepG2DDX59
chr191853305818533112+intron-Distal3.328965.68177HepG2CSTF2T
chr191854486018544888+intron-Distal4.9526026.99935HepG2DDX59
chr191853593118535969+intron-Distal4.154874.04290K562CSTF2T
chr191853548918535530+intron-Distal3.872194.33898HepG2FAM120A
chr191853426418534331+intron-Distal3.336996.23582K562GTF2F1
chr191853425018534318+intron-Distal4.2532410.74872HepG2FAM120A
chr191853095418531050+intron-Distal,intron-Proximal3.286754.48257K562FUS
chr191853372218533789+intron-Distal4.238686.90123K562EWSR1
chr191853126418531317+intron-Distal4.845464.51142K562DDX6
chr191853646218536510+intron-Distal3.781854.66555K562FAM120A
chr191853569418535740+intron-Distal4.4501811.82327K562GTF2F1
chr191853107118531138+intron-Distal3.904958.24222HepG2FAM120A
chr191853895518538999+intron-Distal4.009453.98553K562NONO
chr191853541118535456+intron-Distal4.337574.94603K562CSTF2T
chr191853798218538007+intron-Distal3.724935.08839HepG2CSTF2T
chr191854474818544862+intron-Distal,intron-Proximal6.9366527.73038HepG2PCBP2
chr191853622718536317+intron-Distal3.1555511.32091K562EWSR1
chr191853220418532241+intron-Distal4.083643.82910K562NONO
chr191853547718535534+intron-Distal3.221597.33122HepG2CSTF2T
chr191853108418531138+intron-Distal4.700279.62219K562EWSR1
chr191853506418535158+intron-Distal3.9698513.37988K562EWSR1
chr191853239118532456+intron-Distal4.120364.70114K562FUS
chr191853070818530729+intron-Distal3.741424.12910K562DROSHA
chr191853644718536518+intron-Distal3.536385.38982HepG2PRPF4
chr191853195918531979+intron-Distal4.163674.10339HepG2CSTF2T
chr191853387218533913+intron-Distal3.783953.79154K562FUS
chr191854488818544913+intron-Distal5.2224325.25025HepG2DDX59
chr191853703518537090+intron-Distal4.297605.02240HepG2PRPF4
chr191853644518536513+intron-Distal5.3920710.48231HepG2CSTF2T
chr191853889518538955+intron-Distal4.680394.40745K562SF3B4
chr191853420918534320+intron-Distal4.507185.68315HepG2PRPF4
chr191854480618544870+intron-Distal,intron-Proximal7.0601233.89741HepG2HNRNPK
chr191853575118535797+intron-Distal3.730314.66555K562FAM120A
chr191853327018533361+intron-Distal4.080393.89786K562RBFOX2
chr191853969118539762+intron-Distal4.870687.99471K562NONO
chr191853067618530729+intron-Distal3.265857.93684HepG2CSTF2T
chr191853170218531741+intron-Distal4.499085.41529HepG2CSTF2T
chr191854479918544996+intron-Distal,intron-Proximal7.0222329.18860K562HNRNPK
chr191853592718535989+intron-Distal4.689959.51301K562GTF2F1
chr191853415918534316+intron-Distal5.0491428.25769K562EWSR1
chr191853569018535742+intron-Distal3.572849.44808HepG2CSTF2T
chr191854142318541475+intron-Distal4.335215.19780K562NONO
chr191854346418543498+intron-Proximal3.891225.01332HepG2PRPF8
chr191854402718544073+intron-Proximal5.2294413.75908K562AQR
chr191854302518543067+intron-Proximal4.469398.54286K562PRPF8
chr191853806518538117+intron-Proximal4.686005.28859HepG2SF3B4
chr191854346218543503+intron-Proximal4.521639.23607HepG2EFTUD2
chr191854347018543487+intron-Proximal3.308433.20886K562PRPF8
chr191854389618543931+intron-Proximal5.569597.24749HepG2EFTUD2
chr191854494418544964+intron-Proximal3.615358.84051K562DROSHA
chr191854373818543772+intron-Proximal5.771678.50915HepG2EFTUD2
chr191854495118545024+intron-Proximal5.415729.67053HepG2SF3B4
chr191854358718543629+intron-Proximal5.711888.14804HepG2EFTUD2
chr191854302818543079+intron-Proximal7.4127634.22784K562AQR
chr191854174118541778+intron-Proximal5.677898.43521K562AQR
chr191854494218544986+intron-Proximal5.5079033.87646HepG2DDX59
chr191854345918543508+intron-Proximal6.2469712.14179K562EFTUD2
chr191854359218543626+intron-Proximal5.347576.71458K562EFTUD2
chr191854496418545015+intron-Proximal3.584096.74466K562DROSHA
chr191853806718538156+intron-Proximal5.855649.95947K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SSBP4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SSBP4 is not available on ENCORE database.

  • 105 RBPs can affect the levels of SSBP4.  








The Knockdown/knockout RNA-Seq assay for SSBP4 is not available on ENCORE database.





105 RBPs can affect the gene expression of SSBP4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SSBP4ENSG00000130511.1192.00890248.34500-1.4325011.197209.81360HepG2CALR
SSBP4ENSG00000130511.11309.06360460.96980-0.576805.587004.70200HepG2CKAP4
SSBP4ENSG00000130511.1167.58000170.34480-1.333803.461401.87700HepG2CSTF2T
SSBP4ENSG00000130511.1185.29200179.45310-1.073105.172603.91460HepG2DDX24
SSBP4ENSG00000130511.11578.04530262.546401.138504.458103.68920HepG2DDX6
SSBP4ENSG00000130511.11169.5404088.536300.937205.015604.09380HepG2DNAJC21
SSBP4ENSG00000130511.11314.8190087.761001.842809.062507.96310HepG2DNAJC2
SSBP4ENSG00000130511.1176.14040168.84450-1.149003.119701.93590HepG2AGO1
SSBP4ENSG00000130511.11533.66220390.096500.452002.699401.54650HepG2EIF2S2
SSBP4ENSG00000130511.11261.01140176.869000.561302.591301.80190HepG2EIF4G2
SSBP4ENSG00000130511.11482.11900579.49710-0.265401.884201.36770HepG2ETF1
SSBP4ENSG00000130511.11146.20640360.66720-1.3027013.2272011.56610HepG2FUBP3
SSBP4ENSG00000130511.11453.71210281.401600.689002.031301.43530HepG2FXR1
SSBP4ENSG00000130511.11223.71720113.700800.976303.314601.78400HepG2HNRNPAB
SSBP4ENSG00000130511.11319.66120238.466600.422702.298201.64030HepG2HNRNPF
SSBP4ENSG00000130511.11425.78630264.474900.686903.766302.96140HepG2HNRNPK
SSBP4ENSG00000130511.11426.24690170.493301.321904.404303.56860HepG2HNRNPL
SSBP4ENSG00000130511.11262.5528098.768401.410405.687404.84280HepG2HNRNPU
SSBP4ENSG00000130511.11256.40620131.204200.966502.688401.51850HepG2KHDRBS1
SSBP4ENSG00000130511.11553.72920281.500700.975904.802803.94620HepG2MAGOH
SSBP4ENSG00000130511.11478.11940283.041900.756302.043001.49590HepG2MATR3
SSBP4ENSG00000130511.11452.72800289.681100.644102.559101.94800HepG2NCBP2
SSBP4ENSG00000130511.11483.21480185.587301.380505.555504.48030HepG2NOL12
SSBP4ENSG00000130511.11263.7951077.441401.7681010.204907.45260HepG2NOLC1
SSBP4ENSG00000130511.11398.14430283.922800.487703.659502.98210HepG2PCBP1
SSBP4ENSG00000130511.11353.5041088.093202.0045026.4399024.33890HepG2PPIL4
SSBP4ENSG00000130511.11178.74960300.16640-0.747805.749104.67640HepG2PRPF4
SSBP4ENSG00000130511.11475.08790188.053601.3370016.5557015.35520HepG2PUM1
SSBP4ENSG00000130511.11358.24670469.64560-0.390602.946902.31630HepG2PUS1
SSBP4ENSG00000130511.11267.66210484.34210-0.855609.067708.25310HepG2RBM22
SSBP4ENSG00000130511.11419.01900163.187101.360406.446204.92420HepG2RBM27
SSBP4ENSG00000130511.11511.39750321.528000.669406.482205.71340HepG2NELFE
SSBP4ENSG00000130511.11485.11380299.501000.695706.994106.07950HepG2RECQL
SSBP4ENSG00000130511.11316.10920138.239701.193204.342003.33950HepG2RPS3A
SSBP4ENSG00000130511.11304.5245087.956401.7916023.1804021.56060HepG2SAFB2
SSBP4ENSG00000130511.11330.40100169.854900.959809.366408.19650HepG2SLBP
SSBP4ENSG00000130511.11201.68870102.569800.975406.450105.53340HepG2SMN1
SSBP4ENSG00000130511.11320.08170547.02850-0.773209.427708.65360HepG2SRFBP1
SSBP4ENSG00000130511.1193.56090313.95220-1.7466018.6487017.64930HepG2SRSF1
SSBP4ENSG00000130511.11334.80690174.909600.936608.607607.58190HepG2SRSF5
SSBP4ENSG00000130511.11325.57250120.349101.435705.584603.97180HepG2STIP1
SSBP4ENSG00000130511.11405.96180198.925101.0290012.2643011.11400HepG2SUCLG1
SSBP4ENSG00000130511.11101.48760282.24830-1.4757011.4893010.47050HepG2TAF15
SSBP4ENSG00000130511.11270.7128095.963801.496103.068702.54660HepG2TIAL1
SSBP4ENSG00000130511.11454.6631096.830402.2312019.7628018.43080HepG2TRIM56
SSBP4ENSG00000130511.11384.07590173.065701.150002.507501.67930HepG2TUFM
SSBP4ENSG00000130511.11187.98770444.23060-1.240708.436107.33760HepG2U2AF1
SSBP4ENSG00000130511.11449.98900183.182401.2965010.762509.06790HepG2UBE2L3
SSBP4ENSG00000130511.11265.7348096.152901.466504.340103.38750HepG2UCHL5
SSBP4ENSG00000130511.11267.16840123.837201.109204.310802.93810HepG2XPO5
SSBP4ENSG00000130511.11314.59430160.287100.972702.245301.58640HepG2XRN2
SSBP4ENSG00000130511.11323.77830437.76160-0.435103.446302.85490HepG2ZNF622
SSBP4ENSG00000130511.111704.34990804.251901.0834036.3734034.37060K562AGGF1
SSBP4ENSG00000130511.111301.30520883.838500.558006.740105.03830K562AKAP8
SSBP4ENSG00000130511.111451.62010836.882000.794501.952901.40130K562AKAP8L
SSBP4ENSG00000130511.11405.821001190.83780-1.5531015.0528013.83580K562AQR
SSBP4ENSG00000130511.111218.96250878.131200.473004.633503.41680K562ATP5C1
SSBP4ENSG00000130511.11542.80350327.716500.727903.226301.78900K562BCCIP
SSBP4ENSG00000130511.11674.77360316.763501.090905.190203.86040K562BCLAF1
SSBP4ENSG00000130511.111112.57230602.781200.884104.644003.20300K562CCAR1
SSBP4ENSG00000130511.111282.01250961.055400.415604.819403.22340K562CCDC124
SSBP4ENSG00000130511.11872.439801670.89870-0.937504.036702.84970K562CELF1
SSBP4ENSG00000130511.111219.21890943.609300.369603.131001.56630K562DDX19B
SSBP4ENSG00000130511.11975.389801196.56660-0.294803.052402.37180K562DDX47
SSBP4ENSG00000130511.11783.41420566.020000.468803.362301.88650K562DDX6
SSBP4ENSG00000130511.111116.72720900.410400.310502.734101.86630K562DKC1
SSBP4ENSG00000130511.11993.97990749.614300.407004.332803.46120K562EIF2S2
SSBP4ENSG00000130511.11688.61070525.242800.390603.300202.01520K562EIF4B
SSBP4ENSG00000130511.11860.70490629.920300.450202.695801.44850K562EXOSC5
SSBP4ENSG00000130511.11946.29920637.823000.569005.126203.94830K562FIP1L1
SSBP4ENSG00000130511.11234.33740410.57370-0.809106.160604.87180K562FMR1
SSBP4ENSG00000130511.1122.17080114.34040-2.3666011.528309.88450K562G3BP2
SSBP4ENSG00000130511.111046.357301286.59720-0.298202.425201.36380K562GLRX3
SSBP4ENSG00000130511.11576.58520205.131801.490902.307901.39470K562IGF2BP2
SSBP4ENSG00000130511.11332.05450208.524000.671102.730501.54850K562IGF2BP3
SSBP4ENSG00000130511.11279.49620558.86700-0.999702.978701.49990K562ILF2
SSBP4ENSG00000130511.11150.92500328.96560-1.124106.653405.13550K562KRR1
SSBP4ENSG00000130511.11553.61810215.281801.3626017.5340015.26940K562MAGOH
SSBP4ENSG00000130511.111131.13180850.158500.411904.145002.74790K562MAK16
SSBP4ENSG00000130511.11426.55200214.798800.989603.155902.16730K562MATR3
SSBP4ENSG00000130511.111512.78950994.868400.604502.378701.54470K562MBNL1
SSBP4ENSG00000130511.11972.789801352.70810-0.475705.793704.65270K562MTPAP
SSBP4ENSG00000130511.11351.48150582.43610-0.728706.724404.84020K562NCBP2
SSBP4ENSG00000130511.11849.11370522.619500.700103.048701.99920K562PABPN1
SSBP4ENSG00000130511.11378.13840614.53210-0.700602.641401.86110K562POLR2G
SSBP4ENSG00000130511.111185.34650724.106300.710904.062403.04440K562PPIG
SSBP4ENSG00000130511.11650.27680209.182401.6362013.5901012.17350K562PTBP1
SSBP4ENSG00000130511.11917.391001576.95370-0.781503.114601.98080K562PUM1
SSBP4ENSG00000130511.111140.97080829.803900.459304.100203.45840K562PUS1
SSBP4ENSG00000130511.111160.13970643.267800.850703.527701.34620K562RBFOX2
SSBP4ENSG00000130511.111305.51010808.646000.6909012.2460011.00270K562RBM15
SSBP4ENSG00000130511.11357.11100200.415100.833303.138202.23740K562RBM22
SSBP4ENSG00000130511.11385.24030195.493400.978504.766802.78650K562RBM34
SSBP4ENSG00000130511.11366.29720209.698500.804602.879601.85560K562RPS3
SSBP4ENSG00000130511.11854.86870547.734100.642102.966401.84680K562SAFB
SSBP4ENSG00000130511.11892.875701483.11090-0.7321012.3161010.69590K562SF3A3
SSBP4ENSG00000130511.11204.08430366.40500-0.844305.253403.88600K562SF3B1
SSBP4ENSG00000130511.11962.86680582.821900.724203.075401.66920K562SFPQ
SSBP4ENSG00000130511.11917.67410572.664300.680203.858001.78350K562SMN1
SSBP4ENSG00000130511.1164.19120133.02340-1.051204.525402.36860K562SND1
SSBP4ENSG00000130511.11732.87050378.332200.953802.998701.91940K562SRFBP1
SSBP4ENSG00000130511.11472.90280267.079800.824204.929902.68550K562SRP68
SSBP4ENSG00000130511.11392.54200205.102600.936405.157804.19660K562SRSF1
SSBP4ENSG00000130511.11503.43720202.383801.3146014.7420012.16200K562SRSF4
SSBP4ENSG00000130511.11428.92430193.788301.1461010.392008.19170K562SRSF5
SSBP4ENSG00000130511.1185.59550149.42570-0.803803.422101.97580K562SSB
SSBP4ENSG00000130511.11499.34350836.81210-0.744907.609305.29300K562SSRP1
SSBP4ENSG00000130511.11336.99700673.41310-0.998803.571701.39350K562SUGP2
SSBP4ENSG00000130511.1129.49640112.22970-1.927806.945404.16050K562TAF15
SSBP4ENSG00000130511.11583.98460207.503801.4927020.5306018.24950K562TARDBP
SSBP4ENSG00000130511.11537.91910200.180101.4260020.3186017.95200K562TIA1
SSBP4ENSG00000130511.11437.74440196.610101.154703.036801.88520K562TRA2A
SSBP4ENSG00000130511.1162.50160114.38240-0.871903.248602.38000K562U2AF2
SSBP4ENSG00000130511.111020.571701671.41220-0.711702.685101.30730K562UBE2L3
SSBP4ENSG00000130511.111344.128001593.53780-0.245602.640301.93860K562UPF1
SSBP4ENSG00000130511.11736.613201136.33900-0.625402.419101.30490K562UTP3
SSBP4ENSG00000130511.11888.845201363.52630-0.617308.317906.75860K562WDR3
SSBP4ENSG00000130511.11866.629001418.00320-0.710403.679102.71330K562WDR43
SSBP4ENSG00000130511.11583.85280278.971801.065405.473203.56090K562XRN2
SSBP4ENSG00000130511.11313.68410646.00000-1.042205.291402.70740K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SSBP4 is not available on ENCORE database.





10 RBPs can affect the splicing of SSBP4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESSBP4ENSG00000130511.11chr19+185421621854222818541650185417401854245618542516-0.153000.000010.00091excludedK562AKAP8L
SESSBP4ENSG00000130511.11chr19+1854216218542228185416501854174018542456185425160.652000.000000.00000includedHepG2HNRNPK
SESSBP4ENSG00000130511.11chr19+185421621854222818541650185417401854245618542516-0.136000.000110.01218excludedK562HNRNPL
SESSBP4ENSG00000130511.11chr19+185421621854222818541650185417401854245618542516-0.155000.000020.00962excludedK562EIF4G2
SESSBP4ENSG00000130511.11chr19+1854216218542228185416501854174018542456185425160.165000.000000.00326includedK562SAFB
SESSBP4ENSG00000130511.11chr19+185421621854222818541650185417401854245618542516-0.317000.000000.00002excludedK562HNRNPC
A5SSSSBP4ENSG00000130511.11chr19+185445191854474218544519185446271854502618545372-0.293000.000270.05471shorterK562HNRNPUL1
A5SSSSBP4ENSG00000130511.11chr19+1854451918544742185445191854462718545026185453720.290000.000290.03174longerK562AKAP8L
RISSBP4ENSG00000130511.11chr19+1854336818543545185433681854341418543509185435450.103000.000000.00008includedHepG2RBM22
MXESSBP4ENSG00000130511.11chr19+1854216218542228185424561854251618541650185417401854280918542880-0.112000.000430.039912includedK562HNRNPL
MXESSBP4ENSG00000130511.11chr19+18542456185425161854260218542672185416501854174018542809185428800.230000.000600.095571includedK562HNRNPA1
MXESSBP4ENSG00000130511.11chr19+1854165018541740185424561854251618538707185387921854260218542648-0.363000.000000.000222includedK562TARDBP
MXESSBP4ENSG00000130511.11chr19+18542162185422281854245618542516185416501854174018542602185426720.168000.000000.000101includedK562SAFB
MXESSBP4ENSG00000130511.11chr19+18542162185422281854245618542516185416501854174018542809185428800.137000.000000.000111includedK562SAFB
MXESSBP4ENSG00000130511.11chr19+18541650185417401854216218542228185387071853879218542456185425160.084000.000220.015931includedK562SAFB
MXESSBP4ENSG00000130511.11chr19+1854245618542516185426021854267218542162185422281854280918542880-0.208000.001590.062282includedK562SAFB
MXESSBP4ENSG00000130511.11chr19+1854216218542228185424561854251618541650185417401854280918542880-0.288000.000000.000072includedK562HNRNPC
MXESSBP4ENSG00000130511.11chr19+1854216218542228185424561854251618541650185417401854280918542880-0.174000.000000.000042includedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SSBP4 is not avaliable on ENCORE database.